Rroxscaffold_7G00182630
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
21725616 .. 21739123
13508 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_7G00182630.1

Sequence Viewer

Length: 2634 bp
ATGGCTGCTACTGTAAGTCCTGTGGTTGGATCTCTTGTTTGGGTGGAGGATTCTGAAGAAGCATGGCTAGATGGTGAAATCGTGGAGGTTAAAGGTGAAGAGATCAAGGTTCTCTGCACTTCAGGGAAGACGGTTGTTGTTAAAACTTCCAATGCCTATCCCAAAGATCCTGAAGCTCCACCATGTGGAGTGGATGATATGACAAAGTTAGCTTATTTGCATGAACCAGGAGTTCTAGATAATCTAAGATCAAGATATGATATAAACGAAATATATACTTACACAGGGAACATTTTGATCGCTGTGAACCCTTTCATGAGACTACCTCATCTTTATGATAGCCATATGATGGCACAATATAAAGGGGCAGCCTTTGGTGAGTTGAGTCCACACCCCTTTGCTGTTGCTGATGCTGCATATAGACTGATGATTAATGACGGAGTAAGTCAGGCGATATTGGTTAGTGGTGAGAGTGGGGCTGGTAAAACAGAAAGCACCAAATTGCTTATGCGGTATCTTGCTTACATGGGAGGGAGAGCTGTTGCTGAAGGGAGGACTGTTGAGCAGCAAGTCCTGGAGTCCAATCCTGTTTTGGAAGCATTTGGTAATGCAAAAACTGTTAGAAACAATAACTCCAGTCGTTTTGGTAAATTTGTGGAGATTCAGTTTGATCAGAGGGGGAGAATATCTGGAGCTGCTATAAGAACTTATTTGCTCGAAAGATCACGTGTTTGCCAGTTGTCCAATCCTGAGAGAAATTATCATTGTTTCTACATGCTTTGTGCTGCTCCTCCAGAGGATGTTCAGAGGTACAAATTGGGACACCCAAGAACATTTCATTATTTAAATCAATCAGATTGCTATGAGTTGGATGGGGTTGATGATTCTGAAGAGTACAAGGCAACACGGAAGGCAATGGATATTGTTGGAATAAGTACTGATGAACAGGATGCAATATTTCGAGTTGTGGCAGCAGTTCTGCATCTTGGAAACATTGAATTTGCAAAGGGAAAGGAAATGGACTCGTCCATGCCAAAAGATGAAAAATCTTGGTTCCACCTGAGAACTGTTGCTGAGCTTCTAATGTGTGATGTGAAGGCACTGGAAGATTCTCTTTGCAAACGTGTAATTGTAACTCGTGATGAAACAATCACAAAGTGGCTGGATCCTGAAGCCGCAGCTGTCAGCAGAGATGCTCTGGCCAAAGTTGTGTACTCCAGGCTGTTTGATTGGCTTGTAGACAAGATTAACAATTCAATTGGGCAAGACCCCAACTCAAAGGTTTTAATTGGTGTTCTGGACATTTACGGATTTGAGAGTTTCAAGACCAACAGTTTTGAGCAGTTTTGTATCAATTTGACGAATGAGAAGCTCCAGCAACATTTCAATCAGCACGTTTTTAAAATGGAGCAAGAAGAATATACAAAAGAAGAAATTGATTGGAGTTACATTGATTTTGTTGACAATCAAGATATCCTAGATCTAATTGAAAAGAAACCTGGTGGTATAATTGCTCTTCTAGATGAAGCTTGTATGTTTCCAAGATCAACTCATGAAACATTTGCCCAGAAGTTATATCAGACATTCAAGAATCATCAACGCTTCAGTAAACCAAAATTGTCACGGACTGACTTCACAATTGGCCATTATGCTGGTGATGTCACTTATCAAACAGAATTGTTTCTGGACAAGAACAAGGACTATGTGGTTGCTGAACATCAGGCACTTTTATGTGCTTCCAAATGTTCCTTTGTCTCAGGCTTGTTTCTATCTTTAGTTGAGGATTCAGCTAAGTCGTCAAAGTTCTCTTCTATCGGTTCTCGGTTTAAGCTACAATTGCAACAATTGCTTGAAACTCTCAGTCACACAGAGCCACATTATATTCGCTGTGTAAAACCCAATAATGTTCTTAAACCTGCAATCTTTGAGAACAAGAATATTTTGCAACAACTACGGTGTGGGGGTGTCATGGAGGCAATCAGGATAAGTTGTGCTGGATATCCTACTAGAAAACCGTTTGCTGAATTTGTAGACCGATTTGGCCTTCTTGCACCTGAAGTTTTGGATGGAAGTACTGATGAGGTCAATGCTTGCAAAAGACTTTTAGAGAAGGTGGCCTTAGAAGGCTATCAGATTGGTAAGACAAAGGTCTTTCTTAGAGCTGGGCAGATGGCAGAACTGGATACTCGTAGAACCGAGGTCTTAGGACGATCTGCTAGTATCATTCAAAGGAAGGTTCGATCTTATTTGGCTCGAAGAAGTTATGCCAAACTTCGTCTTTCTGCGATACGCATTCAGTCGGCTTGCAGAGGACAACTTGCTCGACATGTTTACGAGGGTTTGCGGAGAGAAGCTTCCTGTCTGATGATCCAGAGGCATCTGCGCATGTATTTTGCTAGGAAAGCTTACCAAGATTTGTATTTCTCTGCTGTATCTATTCAGACAGGCATCCGAGGGTTGACTGCTCGTAATGAGCTACGCTTAAGAAGGCAGACTAGAGCAGCAATTATCATCCAGAGCCACAGTCGCAAATTTTTGGCACGTTTGCATTATACAAGGACAAAGAAAGCTGCAATCACCACACAGTGTGCTTGGAGGGGAAAGAGTTGCTCGTTTAGAACTACGAAAACTTAA

Protein Analysis

877

Amino Acids

99.52

Weight (kDa)

8.7

Isoelectric Point (pI)

44.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_N PF02736 9 - 50 3.5e-13 Myosin N-terminal SH3-like domain
Myosin_head PF00063 64 - 720 3.3e-256 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2384
Acc36I ACCTGC 1 cut(s) 1924
AccB7I CCANNNNNTGG 2 cut(s) 185, 349
AccI GTMKAC 2 cut(s) 1239, 2031
AciI CCGC 3 cut(s) 511, 1176, 2344
AclWI GGATC 5 cut(s) 37, 161, 1160, 1173, 2362
AcoI YGGCCR 2 cut(s) 1200, 1642
AcsI RAATTY 4 cut(s) 650, 998, 2024, 2531
AcuI CTGAAG 8 cut(s) 75, 105, 192, 567, 909, 1191, 1588, 2076
AcvI CACGTG 1 cut(s) 728
AdeI CACNNNGTG 4 cut(s) 185, 1158, 2586, 2588
AfaI GTAC 5 cut(s) 812, 896, 937, 1214, 2074
AfiI CCNNNNNNNGG 3 cut(s) 26, 185, 349
AflII CTTAAG 1 cut(s) 2482
AflIII ACRYGT 3 cut(s) 727, 1123, 2326
AgsI TTSAA 8 cut(s) 998, 1257, 1324, 1387, 1490, 1588, 1853, 2228
AjnI CCWGG 4 cut(s) 226, 573, 1217, 1498
Alw26I GTCTC 2 cut(s) 313, 1759
AlwI GGATC 5 cut(s) 37, 161, 1160, 1173, 2362
AoxI GGCC 4 cut(s) 1200, 1642, 2041, 2115
ApoI RAATTY 4 cut(s) 650, 998, 2024, 2531
AseI ATTAAT 1 cut(s) 432
Asp700I GAANNNNTTC 2 cut(s) 311, 1680
AspLEI GCGC 1 cut(s) 2385
AsuHPI GGTGA 6 cut(s) 86, 107, 389, 479, 1667, 2569
BalI TGGCCA 2 cut(s) 1202, 1644
BamHI GGATCC 1 cut(s) 1165
BauI CACGAG 1 cut(s) 1137
BbrPI CACGTG 1 cut(s) 728
BbsI GAAGAC 1 cut(s) 134
BbvI GCAGC 9 cut(s) 380, 400, 577, 682, 772, 983, 1190, 2513, 2557
BccI CCATC 5 cut(s) 65, 343, 866, 2060, 2164
BciT130I CCWGG 4 cut(s) 228, 575, 1219, 1500
BciVI GTATCC 1 cut(s) 2176
BclI TGATCA 1 cut(s) 670
BcoDI GTCTC 2 cut(s) 313, 1759
BfaI CTAG 8 cut(s) 68, 236, 1478, 1520, 2007, 2217, 2397, 2496
BfrI CTTAAG 1 cut(s) 2482
BfuAI ACCTGC 1 cut(s) 1924
BfuI GTATCC 1 cut(s) 2176
BglII AGATCT 1 cut(s) 1480
BlpI GCTNAGC 1 cut(s) 1074
BmcAI AGTACT 2 cut(s) 937, 2074
Bme1390I CCNGG 4 cut(s) 228, 575, 1219, 1500
BmiI GGNNCC 2 cut(s) 1055, 1167
BmrFI CCNGG 4 cut(s) 228, 575, 1219, 1500
BmsI GCATC 6 cut(s) 400, 940, 991, 1183, 2386, 2457
BoxI GACNNNNGTC 1 cut(s) 2147
BpiI GAAGAC 1 cut(s) 134
BplI GAGNNNNNCTC 2 cut(s) 310, 342
BpmI CTGGAG 6 cut(s) 596, 619, 711, 777, 1201, 1358
Bpu1102I GCTNAGC 1 cut(s) 1074
BsaAI YACGTR 1 cut(s) 728
BsaJI CCNNGG 2 cut(s) 2196, 2452
BsaXI ACNNNNNCTCC 4 cut(s) 617, 647, 650, 680
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 185, 349
Bse1I ACTGG 4 cut(s) 636, 736, 1107, 2184
Bse3DI GCAATG 1 cut(s) 921
BseBI CCWGG 4 cut(s) 228, 575, 1219, 1500
BseDI CCNNGG 2 cut(s) 2196, 2452
BseGI GGATG 7 cut(s) 199, 805, 877, 955, 2071, 2448, 2511
BseLI CCNNNNNNNGG 3 cut(s) 26, 185, 349
BseMI GCAATG 1 cut(s) 921
BseMII CTCAG 5 cut(s) 741, 1052, 1065, 1770, 1873
BseNI ACTGG 4 cut(s) 636, 736, 1107, 2184
BseRI GAGGAG 1 cut(s) 780
BseXI GCAGC 9 cut(s) 380, 400, 577, 682, 772, 983, 1190, 2513, 2557
BseYI CCCAGC 1 cut(s) 2162
BsgI GTGCAG 1 cut(s) 100
BshFI GGCC 4 cut(s) 1202, 1644, 2043, 2117
BslFI GGGAC 1 cut(s) 834
BslI CCNNNNNNNGG 3 cut(s) 26, 185, 349
BsmAI GTCTC 2 cut(s) 313, 1759
BsmFI GGGAC 1 cut(s) 834
BsmI GAATGC 1 cut(s) 2292
BsnI GGCC 4 cut(s) 1202, 1644, 2043, 2117
Bsp1720I GCTNAGC 1 cut(s) 1074
BspACI CCGC 3 cut(s) 511, 1176, 2344
BspANI GGCC 4 cut(s) 1202, 1644, 2043, 2117
BspCNI CTCAG 5 cut(s) 742, 1053, 1066, 1769, 1872
BspHI TCATGA 2 cut(s) 315, 1552
BspLI GGNNCC 2 cut(s) 1055, 1167
BspMI ACCTGC 1 cut(s) 1924
BspPI GGATC 5 cut(s) 37, 161, 1160, 1173, 2362
BspQI GCTCTTC 1 cut(s) 1521
BspTI CTTAAG 1 cut(s) 2482
BsrDI GCAATG 1 cut(s) 921
BsrI ACTGG 4 cut(s) 636, 736, 1107, 2184
BssECI CCNNGG 2 cut(s) 2196, 2452
BssSI CACGAG 1 cut(s) 1137
Bst2BI CACGAG 1 cut(s) 1137
Bst2UI CCWGG 4 cut(s) 228, 575, 1219, 1500
Bst6I CTCTTC 4 cut(s) 93, 885, 1521, 1813
BstAFI CTTAAG 1 cut(s) 2482
BstAPI GCANNNNNTGC 1 cut(s) 1846
BstBAI YACGTR 1 cut(s) 728
BstC8I GCNNGC 2 cut(s) 2092, 2305
BstF5I GGATG 7 cut(s) 199, 805, 877, 955, 2071, 2448, 2511
BstHHI GCGC 1 cut(s) 2385
BstMAI GTCTC 2 cut(s) 313, 1759
BstMWI GCNNNNNNNGC 5 cut(s) 413, 1837, 1846, 2402, 2526
BstNI CCWGG 4 cut(s) 228, 575, 1219, 1500
BstNSI RCATGY 3 cut(s) 778, 2330, 2389
BstPAI GACNNNNGTC 1 cut(s) 2147
BstSCI CCNGG 4 cut(s) 226, 573, 1217, 1498
BstV1I GCAGC 9 cut(s) 380, 400, 577, 682, 772, 983, 1190, 2513, 2557
BstV2I GAAGAC 1 cut(s) 134
BstX2I RGATCY 4 cut(s) 29, 166, 1165, 1480
BstXI CCANNNNNNTGG 1 cut(s) 1652
BstYI RGATCY 4 cut(s) 29, 166, 1165, 1480
BsuI GTATCC 1 cut(s) 2176
BsuRI GGCC 4 cut(s) 1202, 1644, 2043, 2117
BtsCI GGATG 7 cut(s) 199, 805, 877, 955, 2071, 2448, 2511
BtsIMutI CAGTG 2 cut(s) 1100, 2591
BveI ACCTGC 1 cut(s) 1924
Cac8I GCNNGC 2 cut(s) 2092, 2305
CciI TCATGA 2 cut(s) 315, 1552
CfoI GCGC 1 cut(s) 2385
CsiI ACCWGGT 1 cut(s) 1498
Csp6I GTAC 5 cut(s) 811, 895, 936, 1213, 2073
CviQI GTAC 5 cut(s) 811, 895, 936, 1213, 2073
DraI TTTAAA 2 cut(s) 846, 1402
DraIII CACNNNGTG 4 cut(s) 185, 1158, 2586, 2588
EaeI YGGCCR 2 cut(s) 1200, 1642
Eam1104I CTCTTC 4 cut(s) 93, 885, 1521, 1813
EarI CTCTTC 4 cut(s) 93, 885, 1521, 1813
Eco32I GATATC 2 cut(s) 1474, 2000
Eco57I CTGAAG 8 cut(s) 75, 105, 192, 567, 909, 1191, 1588, 2076
Eco72I CACGTG 1 cut(s) 728
EcoRII CCWGG 4 cut(s) 226, 573, 1217, 1498
EcoRV GATATC 2 cut(s) 1474, 2000
FalI AAGNNNNNCTT 4 cut(s) 1098, 1130, 2102, 2134
FaqI GGGAC 1 cut(s) 834
FauNDI CATATG 1 cut(s) 345
FbaI TGATCA 1 cut(s) 670
FblI GTMKAC 2 cut(s) 1239, 2031
FokI GGATG 7 cut(s) 206, 812, 884, 962, 2078, 2435, 2498
FspBI CTAG 8 cut(s) 68, 236, 1478, 1520, 2007, 2217, 2397, 2496
FspI TGCGCA 1 cut(s) 2384
GlaI GCGC 1 cut(s) 2384
GsaI CCCAGC 1 cut(s) 2166
GsuI CTGGAG 6 cut(s) 596, 619, 711, 777, 1201, 1358
HaeIII GGCC 4 cut(s) 1202, 1644, 2043, 2117
HhaI GCGC 1 cut(s) 2385
Hin6I GCGC 1 cut(s) 2383
HinP1I GCGC 1 cut(s) 2383
HincII GTYRAC 2 cut(s) 1462, 2460
HindII GTYRAC 2 cut(s) 1462, 2460
HindIII AAGCTT 3 cut(s) 1527, 2352, 2403
HinfI GANTC 9 cut(s) 50, 385, 578, 661, 884, 1022, 1109, 1591, 1784
HphI GGTGA 6 cut(s) 86, 107, 389, 479, 1667, 2569
Hpy166II GTNNAC 9 cut(s) 307, 389, 1213, 1240, 1462, 1610, 2032, 2332, 2460
Hpy8I GTNNAC 9 cut(s) 307, 389, 1213, 1240, 1462, 1610, 2032, 2332, 2460
HpyAV CCTTC 8 cut(s) 542, 904, 1090, 2054, 2104, 2117, 2227, 2481
HpyCH4IV ACGT 4 cut(s) 727, 1123, 1395, 2542
HpyF10VI GCNNNNNNNGC 5 cut(s) 413, 1837, 1846, 2402, 2526
HpySE526I ACGT 4 cut(s) 727, 1123, 1395, 2542
HspAI GCGC 1 cut(s) 2383
Ksp22I TGATCA 1 cut(s) 670
LguI GCTCTTC 1 cut(s) 1521
LmnI GCTCC 5 cut(s) 181, 692, 793, 1377, 1408
Lsp1109I GCAGC 9 cut(s) 380, 400, 577, 682, 772, 983, 1190, 2513, 2557
LweI GCATC 6 cut(s) 400, 940, 991, 1183, 2386, 2457
MabI ACCWGGT 1 cut(s) 1498
MaeI CTAG 8 cut(s) 68, 236, 1478, 1520, 2007, 2217, 2397, 2496
MaeII ACGT 4 cut(s) 727, 1123, 1395, 2542
MaeIII GTNAC 5 cut(s) 1132, 1445, 1620, 1660, 1862
MfeI CAATTG 4 cut(s) 1257, 1638, 1835, 1844
MflI RGATCY 4 cut(s) 29, 166, 1165, 1480
MlsI TGGCCA 2 cut(s) 1202, 1644
MluNI TGGCCA 2 cut(s) 1202, 1644
MlyI GAGTC 3 cut(s) 394, 587, 1016
MmeI TCCRAC 3 cut(s) 7, 849, 907
Mox20I TGGCCA 2 cut(s) 1202, 1644
MroXI GAANNNNTTC 2 cut(s) 311, 1680
MscI TGGCCA 2 cut(s) 1202, 1644
MslI CAYNNNNRTG 2 cut(s) 333, 1729
Msp20I TGGCCA 2 cut(s) 1202, 1644
MspA1I CMGCKG 1 cut(s) 1181
MspCI CTTAAG 1 cut(s) 2482
MspR9I CCNGG 4 cut(s) 228, 575, 1219, 1500
MunI CAATTG 4 cut(s) 1257, 1638, 1835, 1844
Mva1269I GAATGC 1 cut(s) 2292
MvaI CCWGG 4 cut(s) 228, 575, 1219, 1500
MwoI GCNNNNNNNGC 5 cut(s) 413, 1837, 1846, 2402, 2526
NdeI CATATG 1 cut(s) 345
NlaIV GGNNCC 2 cut(s) 1055, 1167
NmuCI GTSAC 3 cut(s) 1620, 1660, 1862
NsbI TGCGCA 1 cut(s) 2384
NspI RCATGY 3 cut(s) 778, 2330, 2389
PagI TCATGA 2 cut(s) 315, 1552
PciI ACATGT 1 cut(s) 2326
PciSI GCTCTTC 1 cut(s) 1521
PctI GAATGC 1 cut(s) 2292
PdmI GAANNNNTTC 2 cut(s) 311, 1680
PfeI GAWTC 6 cut(s) 50, 661, 884, 1109, 1591, 1784
PflMI CCANNNNNTGG 2 cut(s) 185, 349
PfoI TCCNGGA 1 cut(s) 573
PleI GAGTC 3 cut(s) 393, 586, 1016
PmaCI CACGTG 1 cut(s) 728
PmlI CACGTG 1 cut(s) 728
PpsI GAGTC 3 cut(s) 393, 586, 1016
Ppu21I YACGTR 1 cut(s) 728
PscI ACATGT 1 cut(s) 2326
PshAI GACNNNNGTC 1 cut(s) 2147
PshBI ATTAAT 1 cut(s) 432
Psp6I CCWGG 4 cut(s) 226, 573, 1217, 1498
PspCI CACGTG 1 cut(s) 728
PspFI CCCAGC 1 cut(s) 2162
PspGI CCWGG 4 cut(s) 226, 573, 1217, 1498
PspN4I GGNNCC 2 cut(s) 1055, 1167
PsuI RGATCY 4 cut(s) 29, 166, 1165, 1480
PvuII CAGCTG 1 cut(s) 1181
RsaI GTAC 5 cut(s) 812, 896, 937, 1214, 2074
RsaNI GTAC 5 cut(s) 811, 895, 936, 1213, 2073
RseI CAYNNNNRTG 2 cut(s) 333, 1729
SapI GCTCTTC 1 cut(s) 1521
ScaI AGTACT 2 cut(s) 937, 2074
SchI GAGTC 3 cut(s) 394, 587, 1016
ScrFI CCNGG 4 cut(s) 228, 575, 1219, 1500
SexAI ACCWGGT 1 cut(s) 1498
SfaNI GCATC 6 cut(s) 400, 940, 991, 1183, 2386, 2457
SmiI ATTTAAAT 1 cut(s) 846
SmiMI CAYNNNNRTG 2 cut(s) 333, 1729
SmlI CTYRAG 1 cut(s) 2482
SmoI CTYRAG 1 cut(s) 2482
SsiI CCGC 3 cut(s) 511, 1176, 2344
SspI AATATT 2 cut(s) 957, 1939
SspMI CTAG 8 cut(s) 68, 236, 1478, 1520, 2007, 2217, 2397, 2496
StyD4I CCNGG 4 cut(s) 226, 573, 1217, 1498
SwaI ATTTAAAT 1 cut(s) 846
TaiI ACGT 4 cut(s) 730, 1126, 1398, 2545
TaqI TCGA 5 cut(s) 717, 961, 2239, 2254, 2323
TaqII GACCGA 1 cut(s) 2049
TatI WGTACW 4 cut(s) 894, 935, 1212, 2072
TauI GCSGC 1 cut(s) 1178
TfiI GAWTC 6 cut(s) 50, 661, 884, 1109, 1591, 1784
TscAI CASTG 2 cut(s) 1107, 2591
TseFI GTSAC 3 cut(s) 1620, 1660, 1862
Tsp45I GTSAC 3 cut(s) 1620, 1660, 1862
TspDTI ATGAA 8 cut(s) 237, 304, 827, 957, 1056, 1158, 1539, 1569
TspGWI ACGGA 4 cut(s) 453, 922, 1323, 1639
TspRI CASTG 2 cut(s) 1107, 2591
Van91I CCANNNNNTGG 2 cut(s) 185, 349
Vha464I CTTAAG 1 cut(s) 2482
VspI ATTAAT 1 cut(s) 432
XapI RAATTY 4 cut(s) 650, 998, 2024, 2531
XbaI TCTAGA 2 cut(s) 235, 1519
XceI RCATGY 3 cut(s) 778, 2330, 2389
XcmI CCANNNNNNNNNTGG 1 cut(s) 589
XmiI GTMKAC 2 cut(s) 1239, 2031
XmnI GAANNNNTTC 2 cut(s) 311, 1680
XspI CTAG 8 cut(s) 68, 236, 1478, 1520, 2007, 2217, 2397, 2496
ZrmI AGTACT 2 cut(s) 937, 2074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.