AT5G43900
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
17656894 .. 17667451
10558 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G43900.2

Sequence Viewer

Length: 4518 bp
ATGGTTGCTAACTTCAATCCATCAGTGGGGTCATTTGTGTGGGTGGAGGATCCTGATGAAGCATGGATTGATGGTGAAGTTGTACAAGTTAATGGTGATGAGATCAAAGTTCTATGCACTTCAGGAAAACATGTTGTTACGAAAATCTCTAATGCTTATCCTAAAGATGTGGAAGCACCAGCCTCTGGAGTGGATGATATGACTAGACTTGCTTATTTGCATGAACCTGGAGTTCTACAGAATTTGCATTCAAGATATGATATTAACGAGATTTATACTTATACAGGAAGTATACTTATTGCTGTTAATCCGTTTAGAAGACTTCCTCATCTTTATAGTAGCCATATGATGGCTCAATATAAAGGAGCTTCCTTAGGAGAATTGAGTCCACATCCATTCGCCGTCGCAGATGCTGCGTATAGACAGATGATTAATGATGGAGTAAGTCAATCTATTCTGGTTAGTGGAGAAAGTGGTGCTGGTAAAACTGAAAGCACAAAGTTGCTTATGAGATATCTTGCTTACATGGGAGGGAGAGCTGCTGCTGAGGGAAGAAGTGTTGAACAGAAAGTGTTGGAGTCGAATCCTGTTTTAGAAGCATTTGGAAATGCAAAGACTGTCAGGAACAATAATTCCAGTCGCTTTGGTAAGTTCGTGGAGATTCAGTTTGACGAAAAGGGAAGAATATCAGGAGCTGCCATAAGAACTTATTTGTTGGAAAGATCACGAGTTTGTCAAGTCTCTGATCCTGAAAGAAACTATCACTGTTTCTACATGCTTTGTGCTGCTCCACAAGAAGATGTGAAGAAATTCAAGCTGGAGGAACCAAAGAAATATCACTATCTCAATCAGTCTAAATGTCTAGAGCTGGATAGTATAAATGATGCGGAGGAATATCATGCCACAAGACGGGCAATGGATGTCGTCGGGATCAGTACGGAGGAGCAGGATGCTATTTTCAGCGTCGTGGCAGCCATTCTCCATATCGGGAATATCGAATTTGCTAAGGGGGAAGAGATTGATTCATCGATACCCAAAGATGATAAATCCTTGTTTCATCTGAAAACTGCAGCTGAGCTTCTCAGCTGCGATGAAAAAGCACTTGAGGATTCTCTATGCAAGCGTATCATGGTAACTCGTGATGAAACCATCACAAAAACTCTTGATCCAGAAGCTGCTACTCTTAGTAGAGATGCTTTGGCTAAAGTCATGTACTCGAGGTTATTTGACTGGCTTGTTGACAAGATAAATAGCTCAATTGGTCAAGATCATGACTCGAAGTACTTGATTGGTGTTCTTGATATTTATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGCATCAATTTGACCAATGAAAAACTTCAACAGCATTTTAATCAGCATGTCTTTAAAATGGAGCAAGAAGAATATAAGAAAGAGGAAATCAACTGGAGCTATATAGAGTTCGTAGACAATCAAGATATTTTAGACTTAATAGAAAAGAAACCAGGAGGTATAATTGCTCTGCTAGATGAAGCTTGCATGTTTCCTAGGTCAACGCATGAAACTTTTGCACAGAAGCTATACCAGACATTCAAAACCCACAAGCGCTTTACCAAGCCAAAACTAGCTCGTAGCGACTTCACAATTTGTCATTATGCTGGTGATGTCACTTATCAGACGGAACTTTTCCTGGACAAGAACAAAGATTACGTTATTGCCGAGCATCAGGCATTGTTAAATTCTTCTAGCTGTTCCTTTGTAGCAAGTTTGTTCCCACCAATGTCTGACGATTCCAAACAATCAAAATTCTCATCTATAGGTACCCGTTTCAAGCAACAATTGGTATCGTTGCTCGAGATTCTAAATACCACGGAGCCGCACTATATTCGCTGTATAAAACCAAATAACCTTCTGAAGCCTGGAATCTTTGAGAACGAAAACATTTTACAACAATTACGTTGTGGGGGAGTGATGGAGGCAATAAGGATTAGTTGTGCTGGCTATCCTACTAGGAAACATTTTGATGAGTTCTTGGCCAGATTTGGTATTCTTGCTCCAGAAGTGTTGGTAAAGAACTCTGATGACCCTGCTGCTTGCAAGAAGCTTCTGGACAAAGTGGGACTCGAAGGGTATCAGATTGGCAAGACGAAAGTTTTTCTGCGGGCTGGACAAATGGCTGACTTGGATACCCGAAGGACTGAGGTCTTGGGAAGATCAGCAAGCATTATTCAGAGAAAAGTTCGGTCATATCTCGCTAAAAAGAGTTTCATCGTTCTGCGTAATTCTGCTAAACAGATTCAGTCAGTTTGCAGAGGTTATCTCGCTAGAAGTGTATATGAAGGCATGCGTAGGGAAGCTGCTGCTTTAAAAATCCAGAGAGACTTGCGTAGGTTTCTGGCTAGGAAGGCTTACACAGAGCTATATTCTGCTGCTGTTTCGGTTCAAGCTGGTATGCGTGGTATGGTTGCCCGGAAAGAACTATGTTTTAGAAGACAAACCAAAGCTGCAATAATAATTCAGACTTGGTGCCGTGGATACCTGGCTCGCCTGCATTACAGAAAACTAAAGAAAGCAGCTATCACGACCCAATGTGCATGGAGATCAAAAGTGGCTCGTGGAGAACTTCGAAAGCTTAAGATGGCTGCTAGAGAAACTGGAGCACTCCAAGCAGCCAAGAACAAGCTAGAGAAGCAAGTTGAAGAGCTGACCTGGAGATTGCAGTTAGAGAAACGGATAAGGACTGACCTGGAAGAGGCCAAAAAACAAGAAAGTGCAAAAGCACAGTCTTCTTTGGAGGAATTGCAACTGAAGTGCAAAGAAACGGAGGCATTGCTTATTAAAGAACGTGAAGCTGCCAAGAAGATTGCTGAGACTGCCCCGATTATTAAGGAGATTCCTGTGGTTGATCAGGAATTAATGGATAAGATCACGAATGAAAATGAAAAGCTGAAGAGTATGGTGAGTTCACTGGAAATGAAAATCGGTGAGACAGAGAAAAAACTTCAAGAGACCACCAAGATTAGCCAGGATAGACTAAATCAAGCATTGGAGGCTGAATCTAAACTAGTGAAGTTGAAGACTGCAATGCAGAGGCTTGAAGAGAAAATATTAGATATGGAAGCTGAGAAGAAAATTATGCATCAGCAAACAATAAGCACTCCTGTGAGGACAAATCTAGGACATCCTCCAACTGCACCTGTTAAGAATTTGGAAAATGGCCACCAAACGAACTTGGAAAAGGAGTTCAATGAAGCCGAGTTTACAACACCAGTTGATGGCAAGGCTGGGAAATCTGCTGCAGAACGTCAAATTATGAATGTTGATGCTCTCATTGACTGTGTAAAAGACAACATCGGTTTCAGTAATGGAAAACCTGTGGCTGCATTTACAATTTACAAGTGTCTACTTCACTGGAAGTGTTTCGAATCTGAGAAGACTAATGTGTTTGATCGTCTGATTCAGATGATTGGTTCCGCGATTGAGAATGAGGATGACAATAGTCACTTGGCGTATTGGTTGACAAGCACATCGGCACTACTATTTTTGCTTCAAAAAAGTCTTAAAACCAATGGCAGCGGAGCAACACAAAGCAAGAAGCCACCTGCTTCAACTTCTTTATTTGGAAGGATGGCCATGAGCTTCCGCTCTTCACCCGCTTCAGGCAACCTTGCTGCTGCAGCTGAAGCTGCTGCTCTTGCAGTGGTCCGCCCAGTGGAGGCAAAGTACCCGGCTCTGCTTTTCAAGCAACAGCTTGCAGCCTATGTTGAGAAAATGTTTGGGATGGTTAGGGATAACTTGAAGAGAGAGTTATCAACTTTACTTTCTCTATGCATTCAGGCACCCAGATCTTCTAAAGGAGGGATGCTAAGATCTGGCAGGTCCTTTGGAAAAGATTCTCCTGCAGTTCACTGGCAAAGCATTATCGACGGTCTTAATTCGCTTCTTGTCACACTGAAAGAAAATCATGTTCCTTTAGTACTCATCCAGAAGATATACTCTCAAACTTTCTCATACATTAACGTACAACTTTTCAACAGTCTCCTTCTGCGTAAAGAGTGCTGTACATTTAGCAATGGTGAATTTGTAAAATCCGGGCTTGCGGAGCTAGAGCTATGGTGTTGTCAAGCCAAAGAATATTCTGGGCCGTCTTGGGAAGAACTGAAACATATTAGACAAGCCGTTGGGTTCTTGGTTATCCACCAGAAATACAGAATCTCATACGATGAAATAGCAAACGATCTTTGCCCGGTCCTCAGTGTCCAGCAGCTTTACCGTATTTGCACCTTATACTGGGACGATAGCTATAACACCCGAAGCGTCTCACAAGAAGTGATATCGAGTATGCGGACACTCATGACAGAGGAATCCAATGATGCAGACAGTGATTCCTTCTTGTTGGATGATGATTCCAGCATTCCTTTCTCAATCGATGATATTTCAAGTTCGATGGAAGAGAAGGATTTTGTAGGAATCAAACCAGCAGAAGAACTTCTTGAAAATCCAGCATTTGTATTCTTGCACTAA

Protein Analysis

1505

Amino Acids

169.93

Weight (kDa)

7.78

Isoelectric Point (pI)

44.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_N PF02736 69 - 110 1.1e-11 Myosin N-terminal SH3-like domain
Myosin_head PF00063 124 - 776 3.2e-255 Myosin head (motor domain)
IQ PF00612 888 - 908 8.6e-07 IQ calmodulin-binding motif
DIL PF01843 1386 - 1488 7.8e-28 DIL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3604
Acc36I ACCTGC 2 cut(s) 3604, 3861
Acc65I GGTACC 1 cut(s) 1814
AccB1I GGYRCC 3 cut(s) 1814, 2520, 3832
AccB7I CCANNNNNTGG 3 cut(s) 185, 349, 3269
AccBSI CCGCTC 1 cut(s) 3639
AccI GTMKAC 3 cut(s) 292, 1461, 3397
AccII CGCG 1 cut(s) 3470
AclWI GGATC 5 cut(s) 44, 57, 740, 938, 1160
AcoI YGGCCR 3 cut(s) 2028, 3211, 3624
AcsI RAATTY 7 cut(s) 241, 809, 998, 1732, 1799, 3199, 4073
AcuI CTGAAG 6 cut(s) 105, 1928, 2822, 2963, 3636, 3696
AfaI GTAC 9 cut(s) 84, 937, 1214, 1283, 1816, 3719, 3972, 4017, 4057
AfeI AGCGCT 1 cut(s) 1601
AflII CTTAAG 1 cut(s) 2627
AflIII ACRYGT 1 cut(s) 130
AhlI ACTAGT 1 cut(s) 3058
AjnI CCWGG 8 cut(s) 226, 1498, 1683, 1912, 2532, 2702, 2739, 3018
AleI CACNNNNGTG 1 cut(s) 3155
AloI GAACNNNNNNTCC 4 cut(s) 617, 649, 3221, 3253
Alw21I GWGCWC 1 cut(s) 2656
Alw26I GTCTC 7 cut(s) 745, 2367, 2858, 2975, 2996, 4037, 4318
AlwI GGATC 5 cut(s) 44, 57, 740, 938, 1160
AlwNI CAGNNNCTG 4 cut(s) 185, 413, 695, 1175
Ama87I CYCGRG 2 cut(s) 1216, 1847
Aor51HI AGCGCT 1 cut(s) 1601
AoxI GGCC 5 cut(s) 2028, 2748, 3211, 3624, 4136
ApoI RAATTY 7 cut(s) 241, 809, 998, 1732, 1799, 3199, 4073
ArsI GACNNNNNNTTYG 2 cut(s) 2762, 2794
AseI ATTAAT 2 cut(s) 432, 2909
Asp700I GAANNNNTTC 5 cut(s) 809, 1371, 3413, 3886, 4482
Asp718I GGTACC 1 cut(s) 1814
AspA2I CCTAGG 1 cut(s) 1541
AspLEI GCGC 1 cut(s) 1602
AspS9I GGNCC 4 cut(s) 3697, 3873, 4136, 4243
AsuC2I CCSGG 4 cut(s) 2464, 3722, 4087, 4241
AsuHPI GGTGA 7 cut(s) 86, 107, 1667, 2965, 2990, 3636, 4082
AsuII TTCGAA 2 cut(s) 2620, 3417
AvaI CYCGRG 2 cut(s) 1216, 1847
AvaII GGWCC 3 cut(s) 3697, 3873, 4243
AvrII CCTAGG 1 cut(s) 1541
AxyI CCTNAGG 1 cut(s) 373
BalI TGGCCA 3 cut(s) 2030, 3213, 3626
BamHI GGATCC 1 cut(s) 49
BanI GGYRCC 3 cut(s) 1814, 2520, 3832
BauI CACGAG 3 cut(s) 726, 1137, 2607
BbsI GAAGAC 5 cut(s) 325, 2491, 2772, 3077, 3434
Bbv12I GWGCWC 1 cut(s) 2656
BbvCI CCTCAGC 1 cut(s) 546
BceAI ACGGC 4 cut(s) 386, 2508, 4123, 4157
BcgI CGANNNNNNTGC 2 cut(s) 1862, 1896
BciT130I CCWGG 8 cut(s) 228, 1500, 1685, 1914, 2534, 2704, 2741, 3020
BciVI GTATCC 2 cut(s) 2173, 2522
BclI TGATCA 1 cut(s) 2899
BcnI CCSGG 4 cut(s) 2464, 3722, 4087, 4241
BcoDI GTCTC 7 cut(s) 745, 2367, 2858, 2975, 2996, 4037, 4318
BcuI ACTAGT 1 cut(s) 3058
BfmI CTRYAG 6 cut(s) 236, 1068, 1809, 3291, 3669, 3894
BfoI RGCGCY 1 cut(s) 1603
BfrI CTTAAG 1 cut(s) 2627
BfuAI ACCTGC 2 cut(s) 3604, 3861
BfuI GTATCC 2 cut(s) 2173, 2522
BglII AGATCT 2 cut(s) 3839, 3863
BlnI CCTAGG 1 cut(s) 1541
BlpI GCTNAGC 1 cut(s) 1074
BmcAI AGTACT 2 cut(s) 1283, 3972
Bme18I GGWCC 3 cut(s) 3697, 3873, 4243
BmeT110I CYCGRG 2 cut(s) 1216, 1847
BmgT120I GGNCC 4 cut(s) 3697, 3873, 4136, 4243
BmiI GGNNCC 7 cut(s) 51, 825, 1816, 1869, 2522, 3466, 3834
BmrI ACTGGG 2 cut(s) 3698, 4294
BmuI ACTGGG 2 cut(s) 3698, 4294
BoxI GACNNNNGTC 2 cut(s) 2195, 3492
BpiI GAAGAC 5 cut(s) 325, 2491, 2772, 3077, 3434
BplI GAGNNNNNCTC 2 cut(s) 2298, 2330
BpmI CTGGAG 7 cut(s) 207, 249, 839, 1462, 2034, 2670, 2725
Bpu10I CCTNAGC 2 cut(s) 546, 1005
Bpu1102I GCTNAGC 1 cut(s) 1074
Bpu14I TTCGAA 2 cut(s) 2620, 3417
BpuEI CTTGAG 1 cut(s) 1124
BpuMI CCSGG 4 cut(s) 2464, 3722, 4087, 4241
Bsa29I ATCGAT 2 cut(s) 1028, 4422
BsaI GGTCTC 1 cut(s) 2996
BsaJI CCNNGG 3 cut(s) 1541, 1863, 2524
BsaXI ACNNNNNCTCC 4 cut(s) 650, 680, 3701, 3731
Bse21I CCTNAGG 1 cut(s) 373
Bse3DI GCAATG 4 cut(s) 921, 2822, 3084, 4072
BseBI CCWGG 8 cut(s) 228, 1500, 1685, 1914, 2534, 2704, 2741, 3020
BseCI ATCGAT 2 cut(s) 1028, 4422
BseDI CCNNGG 3 cut(s) 1541, 1863, 2524
BseMI GCAATG 4 cut(s) 921, 2822, 3084, 4072
BseMII CTCAG 8 cut(s) 537, 1065, 1096, 2184, 2853, 3108, 3414, 4261
BseRI GAGGAG 1 cut(s) 956
BseYI CCCAGC 1 cut(s) 3278
BsgI GTGCAG 1 cut(s) 3171
Bsh1236I CGCG 1 cut(s) 3470
BshFI GGCC 5 cut(s) 2030, 2750, 3213, 3626, 4138
BshNI GGYRCC 3 cut(s) 1814, 2520, 3832
BshVI ATCGAT 2 cut(s) 1028, 4422
BsiHKAI GWGCWC 1 cut(s) 2656
BsiHKCI CYCGRG 2 cut(s) 1216, 1847
BsiSI CCGG 4 cut(s) 2464, 3722, 4086, 4241
BslFI GGGAC 2 cut(s) 2127, 4301
BsmAI GTCTC 7 cut(s) 745, 2367, 2858, 2975, 2996, 4037, 4318
BsmBI CGTCTC 1 cut(s) 4318
BsmFI GGGAC 2 cut(s) 2127, 4301
BsmI GAATGC 3 cut(s) 247, 3825, 4407
BsnI GGCC 5 cut(s) 2030, 2750, 3213, 3626, 4138
Bso31I GGTCTC 1 cut(s) 2996
BsoBI CYCGRG 2 cut(s) 1216, 1847
Bsp119I TTCGAA 2 cut(s) 2620, 3417
Bsp1286I GDGCHC 1 cut(s) 2656
Bsp1407I TGTACA 2 cut(s) 82, 4055
Bsp1720I GCTNAGC 1 cut(s) 1074
BspANI GGCC 5 cut(s) 2030, 2750, 3213, 3626, 4138
BspCNI CTCAG 8 cut(s) 538, 1066, 1095, 2185, 2854, 3109, 3415, 4260
BspDI ATCGAT 2 cut(s) 1028, 4422
BspFNI CGCG 1 cut(s) 3470
BspHI TCATGA 2 cut(s) 1270, 4347
BspLI GGNNCC 7 cut(s) 51, 825, 1816, 1869, 2522, 3466, 3834
BspMAI CTGCAG 4 cut(s) 1072, 3295, 3673, 3898
BspMI ACCTGC 2 cut(s) 3604, 3861
BspPI GGATC 5 cut(s) 44, 57, 740, 938, 1160
BspQI GCTCTTC 2 cut(s) 2688, 3646
BspT104I TTCGAA 2 cut(s) 2620, 3417
BspT107I GGYRCC 3 cut(s) 1814, 2520, 3832
BspTI CTTAAG 1 cut(s) 2627
BspTNI GGTCTC 1 cut(s) 2996
BsrBI CCGCTC 1 cut(s) 3639
BsrDI GCAATG 4 cut(s) 921, 2822, 3084, 4072
BsrGI TGTACA 2 cut(s) 82, 4055
BssECI CCNNGG 3 cut(s) 1541, 1863, 2524
BssNAI GTATAC 1 cut(s) 293
BssSI CACGAG 3 cut(s) 726, 1137, 2607
BssT1I CCWWGG 1 cut(s) 1541
Bst1107I GTATAC 1 cut(s) 293
Bst2BI CACGAG 3 cut(s) 726, 1137, 2607
Bst2UI CCWGG 8 cut(s) 228, 1500, 1685, 1914, 2534, 2704, 2741, 3020
Bst4CI ACNGT 9 cut(s) 619, 767, 1334, 2778, 3332, 3923, 4031, 4268, 4376
Bst6I CTCTTC 8 cut(s) 1008, 2688, 2739, 2939, 3087, 3646, 3788, 4440
BstAFI CTTAAG 1 cut(s) 2627
BstAPI GCANNNNNTGC 1 cut(s) 413
BstAUI TGTACA 2 cut(s) 82, 4055
BstBI TTCGAA 2 cut(s) 2620, 3417
BstDSI CCRYGG 2 cut(s) 1863, 2524
BstENI CCTNNNNNAGG 1 cut(s) 2744
BstFNI CGCG 1 cut(s) 3470
BstH2I RGCGCY 1 cut(s) 1603
BstHHI GCGC 1 cut(s) 1602
BstMAI GTCTC 7 cut(s) 745, 2367, 2858, 2975, 2996, 4037, 4318
BstNI CCWGG 8 cut(s) 228, 1500, 1685, 1914, 2534, 2704, 2741, 3020
BstNSI RCATGY 5 cut(s) 134, 778, 1397, 1537, 2341
BstPAI GACNNNNGTC 2 cut(s) 2195, 3492
BstSFI CTRYAG 6 cut(s) 236, 1068, 1809, 3291, 3669, 3894
BstUI CGCG 1 cut(s) 3470
BstV2I GAAGAC 5 cut(s) 325, 2491, 2772, 3077, 3434
BstX2I RGATCY 3 cut(s) 49, 3839, 3863
BstYI RGATCY 3 cut(s) 49, 3839, 3863
BstZ17I GTATAC 1 cut(s) 293
Bsu15I ATCGAT 2 cut(s) 1028, 4422
Bsu36I CCTNAGG 1 cut(s) 373
BsuI GTATCC 2 cut(s) 2173, 2522
BsuRI GGCC 5 cut(s) 2030, 2750, 3213, 3626, 4138
BsuTUI ATCGAT 2 cut(s) 1028, 4422
BtgI CCRYGG 2 cut(s) 1863, 2524
BtgZI GCGATG 1 cut(s) 1104
BtsI GCAGTG 1 cut(s) 3699
BveI ACCTGC 2 cut(s) 3604, 3861
CaiI CAGNNNCTG 4 cut(s) 185, 413, 695, 1175
CciI TCATGA 2 cut(s) 1270, 4347
CfoI GCGC 1 cut(s) 1602
Cfr13I GGNCC 4 cut(s) 3697, 3873, 4136, 4243
ClaI ATCGAT 2 cut(s) 1028, 4422
CseI GACGC 2 cut(s) 952, 4300
Csp6I GTAC 9 cut(s) 83, 936, 1213, 1282, 1815, 3718, 3971, 4016, 4056
CviQI GTAC 9 cut(s) 83, 936, 1213, 1282, 1815, 3718, 3971, 4016, 4056
DraI TTTAAA 2 cut(s) 1402, 2361
EaeI YGGCCR 3 cut(s) 2028, 3211, 3624
Eam1104I CTCTTC 8 cut(s) 1008, 2688, 2739, 2939, 3087, 3646, 3788, 4440
EarI CTCTTC 8 cut(s) 1008, 2688, 2739, 2939, 3087, 3646, 3788, 4440
EciI GGCGGA 1 cut(s) 3689
Eco130I CCWWGG 1 cut(s) 1541
Eco31I GGTCTC 1 cut(s) 2996
Eco32I GATATC 2 cut(s) 515, 4329
Eco47I GGWCC 3 cut(s) 3697, 3873, 4243
Eco47III AGCGCT 1 cut(s) 1601
Eco57I CTGAAG 6 cut(s) 105, 1928, 2822, 2963, 3636, 3696
Eco81I CCTNAGG 1 cut(s) 373
Eco88I CYCGRG 2 cut(s) 1216, 1847
EcoNI CCTNNNNNAGG 1 cut(s) 2744
EcoO109I RGGNCCY 1 cut(s) 3873
EcoRII CCWGG 8 cut(s) 226, 1498, 1683, 1912, 2532, 2702, 2739, 3018
EcoRV GATATC 2 cut(s) 515, 4329
EcoT14I CCWWGG 1 cut(s) 1541
EcoT22I ATGCAT 2 cut(s) 3135, 3827
ErhI CCWWGG 1 cut(s) 1541
Esp3I CGTCTC 1 cut(s) 4318
FalI AAGNNNNNCTT 2 cut(s) 4470, 4502
FaqI GGGAC 2 cut(s) 2127, 4301
FauI CCCGC 2 cut(s) 2148, 3655
FauNDI CATATG 1 cut(s) 345
FbaI TGATCA 1 cut(s) 2899
FblI GTMKAC 3 cut(s) 292, 1461, 3397
GlaI GCGC 1 cut(s) 1601
GsaI CCCAGC 1 cut(s) 3282
GsuI CTGGAG 7 cut(s) 207, 249, 839, 1462, 2034, 2670, 2725
HaeII RGCGCY 1 cut(s) 1603
HaeIII GGCC 5 cut(s) 2030, 2750, 3213, 3626, 4138
HapII CCGG 4 cut(s) 2464, 3722, 4086, 4241
HgaI GACGC 2 cut(s) 952, 4300
HhaI GCGC 1 cut(s) 1602
Hin6I GCGC 1 cut(s) 1600
HinP1I GCGC 1 cut(s) 1600
HincII GTYRAC 3 cut(s) 1240, 1548, 3513
HindII GTYRAC 3 cut(s) 1240, 1548, 3513
HindIII AAGCTT 3 cut(s) 1527, 2096, 2624
HpaII CCGG 4 cut(s) 2464, 3722, 4086, 4241
HphI GGTGA 7 cut(s) 86, 107, 1667, 2965, 2990, 3636, 4082
Hpy99I CGWCG 4 cut(s) 407, 929, 968, 3923
HpyAV CCTTC 9 cut(s) 1913, 2114, 2181, 2327, 2392, 3612, 4046, 4393, 4444
HpyCH4III ACNGT 9 cut(s) 619, 767, 1334, 2778, 3332, 3923, 4031, 4268, 4376
HpyCH4IV ACGT 5 cut(s) 1704, 1951, 2839, 3298, 4014
HpySE526I ACGT 5 cut(s) 1704, 1951, 2839, 3298, 4014
HspAI GCGC 1 cut(s) 1600
KpnI GGTACC 1 cut(s) 1818
Ksp22I TGATCA 1 cut(s) 2899
LguI GCTCTTC 2 cut(s) 2688, 3646
MaeII ACGT 5 cut(s) 1704, 1951, 2839, 3298, 4014
MaeIII GTNAC 5 cut(s) 136, 1132, 1660, 3494, 3940
MbiI CCGCTC 1 cut(s) 3639
MfeI CAATTG 2 cut(s) 1257, 1832
MflI RGATCY 3 cut(s) 49, 3839, 3863
MhlI GDGCHC 1 cut(s) 2656
MlsI TGGCCA 3 cut(s) 2030, 3213, 3626
MluNI TGGCCA 3 cut(s) 2030, 3213, 3626
MlyI GAGTC 4 cut(s) 394, 587, 1268, 2109
MmeI TCCRAC 4 cut(s) 555, 696, 3206, 4371
Mox20I TGGCCA 3 cut(s) 2030, 3213, 3626
Mph1103I ATGCAT 2 cut(s) 3135, 3827
MroXI GAANNNNTTC 5 cut(s) 809, 1371, 3413, 3886, 4482
MscI TGGCCA 3 cut(s) 2030, 3213, 3626
MslI CAYNNNNRTG 3 cut(s) 37, 2016, 3155
Msp20I TGGCCA 3 cut(s) 2030, 3213, 3626
MspA1I CMGCKG 4 cut(s) 1073, 1086, 3570, 3674
MspCI CTTAAG 1 cut(s) 2627
MspI CCGG 4 cut(s) 2464, 3722, 4086, 4241
MunI CAATTG 2 cut(s) 1257, 1832
Mva1269I GAATGC 3 cut(s) 247, 3825, 4407
MvaI CCWGG 8 cut(s) 228, 1500, 1685, 1914, 2534, 2704, 2741, 3020
MvnI CGCG 1 cut(s) 3470
NciI CCSGG 4 cut(s) 2464, 3722, 4087, 4241
NdeI CATATG 1 cut(s) 345
NlaIV GGNNCC 7 cut(s) 51, 825, 1816, 1869, 2522, 3466, 3834
NmeAIII GCCGAG 2 cut(s) 1738, 3274
NmuCI GTSAC 3 cut(s) 1660, 3494, 3940
NsiI ATGCAT 2 cut(s) 3135, 3827
NspI RCATGY 5 cut(s) 134, 778, 1397, 1537, 2341
NspV TTCGAA 2 cut(s) 2620, 3417
OliI CACNNNNGTG 1 cut(s) 3155
PaeI GCATGC 1 cut(s) 2341
PaeR7I CTCGAG 2 cut(s) 1216, 1847
PagI TCATGA 2 cut(s) 1270, 4347
PaqCI CACCTGC 1 cut(s) 3604
PciI ACATGT 1 cut(s) 130
PciSI GCTCTTC 2 cut(s) 2688, 3646
PcsI WCGNNNNNNNCGW 2 cut(s) 993, 1710
PctI GAATGC 3 cut(s) 247, 3825, 4407
PdmI GAANNNNTTC 5 cut(s) 809, 1371, 3413, 3886, 4482
PflMI CCANNNNNTGG 3 cut(s) 185, 349, 3269
PfoI TCCNGGA 1 cut(s) 1683
PleI GAGTC 4 cut(s) 393, 586, 1268, 2109
PpsI GAGTC 4 cut(s) 393, 586, 1268, 2109
PpuMI RGGWCCY 1 cut(s) 3873
PscI ACATGT 1 cut(s) 130
PshAI GACNNNNGTC 2 cut(s) 2195, 3492
PshBI ATTAAT 2 cut(s) 432, 2909
Psp5II RGGWCCY 1 cut(s) 3873
Psp6I CCWGG 8 cut(s) 226, 1498, 1683, 1912, 2532, 2702, 2739, 3018
PspFI CCCAGC 1 cut(s) 3278
PspGI CCWGG 8 cut(s) 226, 1498, 1683, 1912, 2532, 2702, 2739, 3018
PspN4I GGNNCC 7 cut(s) 51, 825, 1816, 1869, 2522, 3466, 3834
PspPI GGNCC 4 cut(s) 3697, 3873, 4136, 4243
PspPPI RGGWCCY 1 cut(s) 3873
PspXI VCTCGAGB 1 cut(s) 1216
PsrI GAACNNNNNNTAC 4 cut(s) 1685, 1717, 2941, 2973
PstI CTGCAG 4 cut(s) 1072, 3295, 3673, 3898
PstNI CAGNNNCTG 4 cut(s) 185, 413, 695, 1175
PsuI RGATCY 3 cut(s) 49, 3839, 3863
PvuII CAGCTG 3 cut(s) 1073, 1086, 3674
RsaI GTAC 9 cut(s) 84, 937, 1214, 1283, 1816, 3719, 3972, 4017, 4057
RsaNI GTAC 9 cut(s) 83, 936, 1213, 1282, 1815, 3718, 3971, 4016, 4056
RseI CAYNNNNRTG 3 cut(s) 37, 2016, 3155
SapI GCTCTTC 2 cut(s) 2688, 3646
Sau96I GGNCC 4 cut(s) 3697, 3873, 4136, 4243
ScaI AGTACT 2 cut(s) 1283, 3972
SchI GAGTC 4 cut(s) 394, 587, 1268, 2109
SduI GDGCHC 1 cut(s) 2656
SfcI CTRYAG 6 cut(s) 236, 1068, 1809, 3291, 3669, 3894
Sfr274I CTCGAG 2 cut(s) 1216, 1847
SfuI TTCGAA 2 cut(s) 2620, 3417
SinI GGWCC 3 cut(s) 3697, 3873, 4243
SlaI CTCGAG 2 cut(s) 1216, 1847
SmiMI CAYNNNNRTG 3 cut(s) 37, 2016, 3155
SmlI CTYRAG 4 cut(s) 1103, 1216, 1847, 2627
SmoI CTYRAG 4 cut(s) 1103, 1216, 1847, 2627
SpeI ACTAGT 1 cut(s) 3058
SphI GCATGC 1 cut(s) 2341
SspI AATATT 2 cut(s) 3102, 4130
StyI CCWWGG 1 cut(s) 1541
TaaI ACNGT 9 cut(s) 619, 767, 1334, 2778, 3332, 3923, 4031, 4268, 4376
TaiI ACGT 5 cut(s) 1707, 1954, 2842, 3301, 4017
TaqII GACCGA 1 cut(s) 2226
TatI WGTACW 5 cut(s) 82, 1212, 1281, 3970, 4055
TauI GCSGC 1 cut(s) 1873
TseFI GTSAC 3 cut(s) 1660, 3494, 3940
Tsp45I GTSAC 3 cut(s) 1660, 3494, 3940
TspGWI ACGGA 6 cut(s) 300, 953, 1688, 1880, 2740, 2831
Van91I CCANNNNNTGG 3 cut(s) 185, 349, 3269
Vha464I CTTAAG 1 cut(s) 2627
VpaK11BI GGWCC 3 cut(s) 3697, 3873, 4243
VspI ATTAAT 2 cut(s) 432, 2909
XagI CCTNNNNNAGG 1 cut(s) 2744
XapI RAATTY 7 cut(s) 241, 809, 998, 1732, 1799, 3199, 4073
XbaI TCTAGA 1 cut(s) 862
XceI RCATGY 5 cut(s) 134, 778, 1397, 1537, 2341
XhoI CTCGAG 2 cut(s) 1216, 1847
XmaJI CCTAGG 1 cut(s) 1541
XmiI GTMKAC 3 cut(s) 292, 1461, 3397
XmnI GAANNNNTTC 5 cut(s) 809, 1371, 3413, 3886, 4482
ZrmI AGTACT 2 cut(s) 1283, 3972
Zsp2I ATGCAT 2 cut(s) 3135, 3827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.