Rroxscaffold_7G00184180
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
23377698 .. 23390736
13039 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00184180.1

Sequence Viewer

Length: 1623 bp
ATGTCTGGTCCTGTTTTGGAAGCATTTGGTAATGCAAAAACTGTTAGAAACAATAACTCCAGTCGTTTCGGCAAGTATGTGGAGATTCAGTTTGATAAGAGCGGAAGGATCTCTGGAGCTGCTATAAGAACTTATTTGCTCGAAAGATCACGTGTTTGTCAGGTCTCCAATCCTGAGAGAAATTATCATTGCTCCTACATGCTTTGTGCTGCTCCACCAGAGGATGTTCAGAGGTACAGATTGGGACACCCACGAACATTTCATTATTTAAATCAATCAGATTGCTATGAGTTGGATGGGGTTGATGATTCTGAAGAGTACAAGGCAACACGCAAGGCAATGAAGATTGTTGGAAGTACTGATGAACAGGATGCAATATTTCGAGTTGTGGCAGCAGTTCTGCATCTTGGAAACATTGTATTTGCAAAGGGAAAGGAAACGGACTCGTCCATGCCAAAAGATGAAAAGTCTCGGTTCTACCTGAAAACTGTTGCTGAGCTTCTAATGTGTGATGTGAAGGCACTGGAAGATTCTTTTTGCAAATGTGTAATTGTAACTCGTGATGAAACAATCACAAAGTGGCTGGATACTAAAGCTGCAGCCGCCAGCAGAGATGCTCTGGCTAAAGCTGTGTACACCAGGCTGTTTGATTTGCTTGTAGACAAGATTAACAATTCAATTGGGCAACACCCCAACTCAAAGGTTTTAATTGGTGTTCTGGACTTTTATGGATTTGAGAGTTTCAAGACTAACAGTTTTGAGCAGTTTTGTGTCAATCTGACGAATGAGAAGCTTCAGCAGCATTTCAATCAGTACGTTTTTAAAATGGGGCAAGACGAGTATACAAAAGAAGAAATTGGTTGGAGTTGCTTTGATTTCGTTGACGATCAAGATATCCTAGATCTAATTGAAAAGAAACCTCGTGGCATAATTGCTCTTCTAGATGAAGCTTGTATGTTTCCAAGATCAACTCATGAAACATTTGCCCAGAAGTTATATCAGACATTCAAGAATCATCAACGCTTCAGTAAACCAAAATTGTCACGGACTGACTTCACAATTGGCCATTATGCTGGTGATGTCACTTATCAAACAGAATTGTTTCTGGACAAGAACAAGGACTATGCAGTTGCTGAACATCGGGCACTTTTATGTGCTTCCAAATGTTCCTTTGTGACAGGCTTGTTTCTGTCTGTAGCTGAGGATTCAGCCAAGTCGTCAAAGTTCTCTTCTATTGGTTCTCAGTTTAAGCTACAATTGCAACAATTGCTTGAAACTCTGAGTCACACAGAGCCTCATTATATTTGCTGTGTAAAACCCAATAATGTTCTTAAACCTGCAATCTTTGAGAACAAGAATGTTTTACAACAACTACGGTGTGGGGGTGTCATGGAGGCAATCAGGATAAGTTGTGCTGGATATTGTACTAGAAGAGCGTTTGCTGAATTTGTAGACCGATTTGGCCTTCTTGCACCTGAAGTTTTGGATGGAAGTACTGATGAGGTCAATGCTTGCAAAAGACTTTTAGAGAAGGTGGCCTTAGAAGGCTATCAGATTGGTAAAACGAAGGTCTTTCTTAGAGCTGGGCGGATGGCAGGGATACTCGTAGAACCAAGGTCTTAG

Protein Analysis

540

Amino Acids

61.16

Weight (kDa)

7.77

Isoelectric Point (pI)

38.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_head PF00063 2 - 527 5.4e-187 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1345
AccBSI CCGCTC 1 cut(s) 102
AccI GTMKAC 3 cut(s) 660, 842, 1452
AciI CCGC 3 cut(s) 102, 603, 1588
AclWI GGATC 1 cut(s) 116
AcoI YGGCCR 1 cut(s) 1063
AcsI RAATTY 1 cut(s) 1445
AcuI CTGAAG 4 cut(s) 333, 779, 1009, 1497
AcvI CACGTG 1 cut(s) 152
AdeI CACNNNGTG 1 cut(s) 579
AfaI GTAC 7 cut(s) 236, 320, 358, 635, 815, 1426, 1495
AflIII ACRYGT 1 cut(s) 151
AgsI TTSAA 6 cut(s) 678, 745, 808, 911, 1009, 1274
AjnI CCWGG 1 cut(s) 638
AluBI AGCT 9 cut(s) 119, 499, 596, 629, 793, 950, 1199, 1252, 1583
AluI AGCT 9 cut(s) 119, 499, 596, 629, 793, 950, 1199, 1252, 1583
Alw26I GTCTC 2 cut(s) 169, 474
AlwI GGATC 1 cut(s) 116
AlwNI CAGNNNCTG 1 cut(s) 1133
AoxI GGCC 3 cut(s) 1063, 1462, 1536
ApeKI GCWGC 6 cut(s) 119, 209, 392, 596, 599, 799
ApoI RAATTY 1 cut(s) 1445
Asp700I GAANNNNTTC 1 cut(s) 1101
AspS9I GGNCC 1 cut(s) 8
AsuHPI GGTGA 1 cut(s) 1088
AvaII GGWCC 1 cut(s) 8
BaeGI GKGCMC 1 cut(s) 1147
BalI TGGCCA 1 cut(s) 1065
BauI CACGAG 2 cut(s) 558, 921
BbrPI CACGTG 1 cut(s) 152
BbvCI CCTCAGC 1 cut(s) 1200
BbvI GCAGC 6 cut(s) 106, 196, 404, 583, 611, 811
BccI CCATC 3 cut(s) 290, 1481, 1585
BciT130I CCWGG 1 cut(s) 640
BciVI GTATCC 2 cut(s) 580, 1593
BcoDI GTCTC 2 cut(s) 169, 474
BfaI CTAG 3 cut(s) 899, 941, 1428
BfmI CTRYAG 2 cut(s) 597, 1194
BfuAI ACCTGC 1 cut(s) 1345
BfuI GTATCC 2 cut(s) 580, 1593
BglII AGATCT 1 cut(s) 901
BisI GCNGC 7 cut(s) 120, 210, 393, 597, 600, 603, 800
BlpI GCTNAGC 1 cut(s) 495
BlsI GCNGC 7 cut(s) 121, 211, 394, 598, 601, 604, 801
BmcAI AGTACT 2 cut(s) 358, 1495
Bme1390I CCNGG 1 cut(s) 640
Bme18I GGWCC 1 cut(s) 8
BmgT120I GGNCC 1 cut(s) 8
BmrFI CCNGG 1 cut(s) 640
BmsI GCATC 3 cut(s) 361, 412, 604
BpmI CTGGAG 2 cut(s) 43, 135
Bpu10I CCTNAGC 1 cut(s) 1200
Bpu1102I GCTNAGC 1 cut(s) 495
BsaAI YACGTR 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 169
BsaJI CCNNGG 1 cut(s) 1613
BsaXI ACNNNNNCTCC 4 cut(s) 41, 71, 74, 104
Bse1I ACTGG 2 cut(s) 60, 528
Bse3DI GCAATG 2 cut(s) 187, 345
BseBI CCWGG 1 cut(s) 640
BseDI CCNNGG 1 cut(s) 1613
BseGI GGATG 5 cut(s) 229, 301, 376, 1492, 1596
BseMI GCAATG 2 cut(s) 187, 345
BseMII CTCAG 5 cut(s) 165, 486, 1191, 1256, 1271
BseNI ACTGG 2 cut(s) 60, 528
BseSI GKGCMC 1 cut(s) 1147
BseXI GCAGC 6 cut(s) 106, 196, 404, 583, 611, 811
BseYI CCCAGC 1 cut(s) 1583
BshFI GGCC 3 cut(s) 1065, 1464, 1538
BslFI GGGAC 1 cut(s) 258
BsmAI GTCTC 2 cut(s) 169, 474
BsmFI GGGAC 1 cut(s) 258
BsnI GGCC 3 cut(s) 1065, 1464, 1538
Bso31I GGTCTC 1 cut(s) 169
Bsp1286I GDGCHC 1 cut(s) 1147
Bsp1407I TGTACA 1 cut(s) 633
Bsp143I GATC 5 cut(s) 108, 146, 886, 901, 965
Bsp1720I GCTNAGC 1 cut(s) 495
BspACI CCGC 3 cut(s) 102, 603, 1588
BspANI GGCC 3 cut(s) 1065, 1464, 1538
BspCNI CTCAG 5 cut(s) 166, 487, 1192, 1255, 1272
BspHI TCATGA 1 cut(s) 973
BspMAI CTGCAG 1 cut(s) 601
BspMI ACCTGC 1 cut(s) 1345
BspPI GGATC 1 cut(s) 116
BspQI GCTCTTC 2 cut(s) 942, 1426
BspTNI GGTCTC 1 cut(s) 169
BsrBI CCGCTC 1 cut(s) 102
BsrDI GCAATG 2 cut(s) 187, 345
BsrGI TGTACA 1 cut(s) 633
BsrI ACTGG 2 cut(s) 60, 528
BssECI CCNNGG 1 cut(s) 1613
BssMI GATC 5 cut(s) 108, 146, 886, 901, 965
BssNAI GTATAC 1 cut(s) 843
BssSI CACGAG 2 cut(s) 558, 921
BssT1I CCWWGG 1 cut(s) 1613
Bst1107I GTATAC 1 cut(s) 843
Bst2BI CACGAG 2 cut(s) 558, 921
Bst2UI CCWGG 1 cut(s) 640
Bst4CI ACNGT 4 cut(s) 43, 490, 755, 1377
Bst6I CTCTTC 4 cut(s) 309, 942, 1234, 1426
BstAPI GCANNNNNTGC 1 cut(s) 1267
BstAUI TGTACA 1 cut(s) 633
BstBAI YACGTR 1 cut(s) 152
BstC8I GCNNGC 2 cut(s) 607, 1513
BstDEI CTNAG 8 cut(s) 174, 495, 1200, 1242, 1280, 1540, 1577, 1620
BstF5I GGATG 5 cut(s) 229, 301, 376, 1492, 1596
BstKTI GATC 5 cut(s) 111, 149, 889, 904, 968
BstMAI GTCTC 2 cut(s) 169, 474
BstMBI GATC 5 cut(s) 108, 146, 886, 901, 965
BstMWI GCNNNNNNNGC 4 cut(s) 602, 799, 1258, 1267
BstNI CCWGG 1 cut(s) 640
BstNSI RCATGY 1 cut(s) 202
BstSCI CCNGG 1 cut(s) 638
BstSFI CTRYAG 2 cut(s) 597, 1194
BstSLI GKGCMC 1 cut(s) 1147
BstV1I GCAGC 6 cut(s) 106, 196, 404, 583, 611, 811
BstX2I RGATCY 2 cut(s) 108, 901
BstXI CCANNNNNNTGG 1 cut(s) 1073
BstYI RGATCY 2 cut(s) 108, 901
BstZ17I GTATAC 1 cut(s) 843
BsuI GTATCC 2 cut(s) 580, 1593
BsuRI GGCC 3 cut(s) 1065, 1464, 1538
BtsCI GGATG 5 cut(s) 229, 301, 376, 1492, 1596
BtsIMutI CAGTG 1 cut(s) 521
BveI ACCTGC 1 cut(s) 1345
Cac8I GCNNGC 2 cut(s) 607, 1513
CaiI CAGNNNCTG 1 cut(s) 1133
CciI TCATGA 1 cut(s) 973
Cfr13I GGNCC 1 cut(s) 8
Csp6I GTAC 7 cut(s) 235, 319, 357, 634, 814, 1425, 1494
CviAII CATG 4 cut(s) 199, 451, 974, 1390
CviQI GTAC 7 cut(s) 235, 319, 357, 634, 814, 1425, 1494
DdeI CTNAG 8 cut(s) 174, 495, 1200, 1242, 1280, 1540, 1577, 1620
DpnI GATC 5 cut(s) 110, 148, 888, 903, 967
DpnII GATC 5 cut(s) 108, 146, 886, 901, 965
DraI TTTAAA 2 cut(s) 270, 823
DraIII CACNNNGTG 1 cut(s) 579
EaeI YGGCCR 1 cut(s) 1063
Eam1104I CTCTTC 4 cut(s) 309, 942, 1234, 1426
EarI CTCTTC 4 cut(s) 309, 942, 1234, 1426
EciI GGCGGA 1 cut(s) 1603
Eco130I CCWWGG 1 cut(s) 1613
Eco31I GGTCTC 1 cut(s) 169
Eco32I GATATC 1 cut(s) 895
Eco47I GGWCC 1 cut(s) 8
Eco57I CTGAAG 4 cut(s) 333, 779, 1009, 1497
Eco72I CACGTG 1 cut(s) 152
EcoRII CCWGG 1 cut(s) 638
EcoRV GATATC 1 cut(s) 895
EcoT14I CCWWGG 1 cut(s) 1613
ErhI CCWWGG 1 cut(s) 1613
FaeI CATG 4 cut(s) 202, 454, 977, 1393
FalI AAGNNNNNCTT 2 cut(s) 1523, 1555
FaqI GGGAC 1 cut(s) 258
FatI CATG 4 cut(s) 198, 450, 973, 1389
FblI GTMKAC 3 cut(s) 660, 842, 1452
Fnu4HI GCNGC 7 cut(s) 120, 210, 393, 597, 600, 603, 800
FokI GGATG 5 cut(s) 236, 308, 383, 1499, 1603
Fsp4HI GCNGC 7 cut(s) 120, 210, 393, 597, 600, 603, 800
FspBI CTAG 3 cut(s) 899, 941, 1428
GluI GCNGC 7 cut(s) 120, 210, 393, 597, 600, 603, 800
GsaI CCCAGC 1 cut(s) 1587
GsuI CTGGAG 2 cut(s) 43, 135
HaeIII GGCC 3 cut(s) 1065, 1464, 1538
Hin1II CATG 4 cut(s) 202, 454, 977, 1393
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HindIII AAGCTT 2 cut(s) 791, 948
HinfI GANTC 7 cut(s) 85, 308, 443, 530, 1012, 1205, 1282
HphI GGTGA 1 cut(s) 1088
Hpy166II GTNNAC 7 cut(s) 634, 636, 661, 843, 883, 1031, 1453
Hpy188I TCNGA 7 cut(s) 231, 280, 313, 780, 1002, 1281, 1554
Hpy8I GTNNAC 7 cut(s) 634, 636, 661, 843, 883, 1031, 1453
HpyAV CCTTC 6 cut(s) 99, 511, 1475, 1525, 1538, 1561
HpyCH4III ACNGT 4 cut(s) 43, 490, 755, 1377
HpyCH4IV ACGT 2 cut(s) 151, 816
HpyF10VI GCNNNNNNNGC 4 cut(s) 602, 799, 1258, 1267
HpyF3I CTNAG 8 cut(s) 174, 495, 1200, 1242, 1280, 1540, 1577, 1620
HpySE526I ACGT 2 cut(s) 151, 816
Hsp92II CATG 4 cut(s) 202, 454, 977, 1393
Kzo9I GATC 5 cut(s) 108, 146, 886, 901, 965
LguI GCTCTTC 2 cut(s) 942, 1426
LmnI GCTCC 3 cut(s) 116, 197, 217
Lsp1109I GCAGC 6 cut(s) 106, 196, 404, 583, 611, 811
LweI GCATC 3 cut(s) 361, 412, 604
MaeI CTAG 3 cut(s) 899, 941, 1428
MaeII ACGT 2 cut(s) 151, 816
MaeIII GTNAC 5 cut(s) 553, 1041, 1081, 1174, 1283
MalI GATC 5 cut(s) 110, 148, 888, 903, 967
MbiI CCGCTC 1 cut(s) 102
MboI GATC 5 cut(s) 108, 146, 886, 901, 965
MboII GAAGA 7 cut(s) 326, 355, 539, 863, 929, 1221, 1443
MfeI CAATTG 4 cut(s) 678, 1059, 1256, 1265
MflI RGATCY 2 cut(s) 108, 901
MhlI GDGCHC 1 cut(s) 1147
MlsI TGGCCA 1 cut(s) 1065
MluNI TGGCCA 1 cut(s) 1065
MlyI GAGTC 2 cut(s) 437, 1291
MmeI TCCRAC 3 cut(s) 273, 331, 842
MnlI CCTC 7 cut(s) 214, 225, 930, 1195, 1305, 1387, 1495
Mox20I TGGCCA 1 cut(s) 1065
MroXI GAANNNNTTC 1 cut(s) 1101
MscI TGGCCA 1 cut(s) 1065
MseI TTAA 6 cut(s) 269, 669, 707, 822, 1248, 1332
MslI CAYNNNNRTG 1 cut(s) 1150
Msp20I TGGCCA 1 cut(s) 1065
MspR9I CCNGG 1 cut(s) 640
MunI CAATTG 4 cut(s) 678, 1059, 1256, 1265
MvaI CCWGG 1 cut(s) 640
MwoI GCNNNNNNNGC 4 cut(s) 602, 799, 1258, 1267
NdeII GATC 5 cut(s) 108, 146, 886, 901, 965
NlaIII CATG 4 cut(s) 202, 454, 977, 1393
NmuCI GTSAC 4 cut(s) 1041, 1081, 1174, 1283
NspI RCATGY 1 cut(s) 202
PagI TCATGA 1 cut(s) 973
PciSI GCTCTTC 2 cut(s) 942, 1426
PdmI GAANNNNTTC 1 cut(s) 1101
PfeI GAWTC 5 cut(s) 85, 308, 530, 1012, 1205
PkrI GCNGC 7 cut(s) 121, 211, 394, 598, 601, 604, 801
PleI GAGTC 2 cut(s) 437, 1290
PmaCI CACGTG 1 cut(s) 152
PmlI CACGTG 1 cut(s) 152
PpsI GAGTC 2 cut(s) 437, 1290
Ppu21I YACGTR 1 cut(s) 152
Psp6I CCWGG 1 cut(s) 638
PspCI CACGTG 1 cut(s) 152
PspFI CCCAGC 1 cut(s) 1583
PspGI CCWGG 1 cut(s) 638
PspPI GGNCC 1 cut(s) 8
PstI CTGCAG 1 cut(s) 601
PstNI CAGNNNCTG 1 cut(s) 1133
PsuI RGATCY 2 cut(s) 108, 901
RsaI GTAC 7 cut(s) 236, 320, 358, 635, 815, 1426, 1495
RsaNI GTAC 7 cut(s) 235, 319, 357, 634, 814, 1425, 1494
RseI CAYNNNNRTG 1 cut(s) 1150
SapI GCTCTTC 2 cut(s) 942, 1426
SaqAI TTAA 6 cut(s) 269, 669, 707, 822, 1248, 1332
SatI GCNGC 7 cut(s) 120, 210, 393, 597, 600, 603, 800
Sau3AI GATC 5 cut(s) 108, 146, 886, 901, 965
Sau96I GGNCC 1 cut(s) 8
ScaI AGTACT 2 cut(s) 358, 1495
SchI GAGTC 2 cut(s) 437, 1291
ScrFI CCNGG 1 cut(s) 640
SduI GDGCHC 1 cut(s) 1147
SfaNI GCATC 3 cut(s) 361, 412, 604
SfcI CTRYAG 2 cut(s) 597, 1194
SinI GGWCC 1 cut(s) 8
SmiI ATTTAAAT 1 cut(s) 270
SmiMI CAYNNNNRTG 1 cut(s) 1150
SsiI CCGC 3 cut(s) 102, 603, 1588
SspI AATATT 1 cut(s) 378
SspMI CTAG 3 cut(s) 899, 941, 1428
StyD4I CCNGG 1 cut(s) 638
StyI CCWWGG 1 cut(s) 1613
SwaI ATTTAAAT 1 cut(s) 270
TaaI ACNGT 4 cut(s) 43, 490, 755, 1377
TaiI ACGT 2 cut(s) 154, 819
TaqI TCGA 2 cut(s) 141, 382
TaqII GACCGA 1 cut(s) 1470
TatI WGTACW 5 cut(s) 318, 356, 633, 1424, 1493
TauI GCSGC 1 cut(s) 605
TfiI GAWTC 5 cut(s) 85, 308, 530, 1012, 1205
Tru1I TTAA 6 cut(s) 269, 669, 707, 822, 1248, 1332
Tru9I TTAA 6 cut(s) 269, 669, 707, 822, 1248, 1332
TscAI CASTG 1 cut(s) 528
TseFI GTSAC 4 cut(s) 1041, 1081, 1174, 1283
TseI GCWGC 6 cut(s) 119, 209, 392, 596, 599, 799
Tsp45I GTSAC 4 cut(s) 1041, 1081, 1174, 1283
TspDTI ATGAA 7 cut(s) 251, 356, 378, 477, 579, 960, 990
TspGWI ACGGA 2 cut(s) 455, 1060
TspRI CASTG 1 cut(s) 528
VpaK11BI GGWCC 1 cut(s) 8
XapI RAATTY 1 cut(s) 1445
XbaI TCTAGA 1 cut(s) 940
XceI RCATGY 1 cut(s) 202
XmiI GTMKAC 3 cut(s) 660, 842, 1452
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 3 cut(s) 899, 941, 1428
ZrmI AGTACT 2 cut(s) 358, 1495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.