pycom10g14900
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
18270707 .. 18275404
4698 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g14900.1

Sequence Viewer

Length: 1557 bp
ATGGCTGCTGCTATTAGTCTTGTGGTTGGATCTCTTGTTTGGGTCGAGGATCCTGAAGAAGCTTGGCTAGATGGTGAAATTGTGGAGATTAAAAGTGAAAACTACAAGGTTCTCTGTACTTCAGGGAAGACGGTTGTCGTTAAATCCTCCAGTGTCTATCCTAAAGATGCCGAGGCCCCACCCTGTGGAGTGGATGATATGACAAAGCTGGCTTATTTGCATGAACCAGGTGTCCTGGATAATTTAAGATCAAGATATGATATCAACGAAATATATACTTACACAGGGAGCATTTTGATTGCCGTAAACCCTTTTTGTAGACTACCTCATCTGTATGATAGCCATATGATGGAACAATATAAAGGGGCAGATTTTGGTGAACTGAGCCCACACCCGTTTGCTGTTGCAGACGCGGCATATAGACTTATGATTAACGACGGAATAAGTCAGTCAATATTGGTTAGTGGTGAGAGTGGGGCTGGTAAAACTGAAAGCACCAAATTGCTTATGCGCTATCTTGCCTACATGGGAGGGAGAGGTGTTGCTGAAGGGAGGAGTGTTGAGCAGCAAGTCTTGGAGTCAAATCCTGTTTTAGAAGCATTTGGAAATGCAAAGACTGTTAGAAACAATAACTCCAGTCGTTTTGGTAAGTTTGTGGAGCTTCAGTTTGATCAGAATGGGAGGATCTCTGGAGCTGCAATAAGAACTTATTTGCTTGAAAGATCACGCGTTTGTCAGGTGTCCAATCCTGAGAGAAATTATCATTGTTTCTACATGCTTTGTGCTGCACCACCTGAGGATGTTCAGAGGTTCAAATTGGGACCCGCAAAAACGTTTCATTATTTGAATCAATCAGATTGTATTGAATTGGATGCGCTTGATGATGCTGAAGAATACATTGCTACAAGGAAGGCAATGGAGGTTGTTGGAATAAGTTCTGAAGAACAGGATGCCATATTTCGAGTTGTGGCAGCAATTCTACATCTTGGAAACATTGAATTTGCAAAGGGTAAGGAAATGGACTCTTCCATGCCGAAGGACGACAAATCTTGGTTCCACCTAAAAACTGCTGCCCAGCTTTTCATGTGTGATGTGAAGGCGCTAGAAGATTCTCTATGCAAACGCATTATTGTTACTCGTGATGAAACAATCACAAAATGGCTGGATCCAGAAGCCGCAGCTGTCAGTAGAGATGCTTTGGCTAAGGTTGTGTACTCGAGGTTGTTTGATTGGCTTGTGGATAAGATTAACAATTCAATTGGTCAAGATCCTGACTCAAAGTTCTTAATTGGAGTTTTGGACATTTATGGATTTGAGAGTTTCAAAACAAACAGTTTTGAGCAATTTTGCATCAATTTGACGAATGAGAAGCTTCAGCAACATTTCAATCAGCACGTTTTCAAAATGGAGCAAGAAGAATATACAAAAGAAGAGATTGATTGGAGTTACATTGAATTTGTTGACAACAAAGATATCCTAGATTTGATTGAAAAGAAACCTGGTGGCATAATTGCTCTTCTCGATGAAGCTTGTATGTTTCCAAGATCGATCACATGA

Protein Analysis

519

Amino Acids

58.33

Weight (kDa)

4.9

Isoelectric Point (pI)

45.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_N PF02736 9 - 52 7.3e-15 Myosin N-terminal SH3-like domain
Myosin_head PF00063 64 - 516 2.5e-190 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 185, 349
AccI GTMKAC 1 cut(s) 319
AccII CGCG 2 cut(s) 413, 729
AciI CCGC 3 cut(s) 413, 825, 1176
AclI AACGTT 1 cut(s) 833
AclWI GGATC 7 cut(s) 37, 44, 57, 692, 1160, 1173, 1262
AcsI RAATTY 2 cut(s) 998, 1454
AcuI CTGAAG 7 cut(s) 75, 105, 567, 647, 909, 960, 1358
AdeI CACNNNGTG 1 cut(s) 185
AfaI GTAC 2 cut(s) 118, 1214
AfiI CCNNNNNNNGG 2 cut(s) 185, 349
AflIII ACRYGT 1 cut(s) 727
AjnI CCWGG 3 cut(s) 226, 234, 1498
AloI GAACNNNNNNTCC 2 cut(s) 216, 248
AluBI AGCT 8 cut(s) 62, 208, 661, 695, 1078, 1181, 1372, 1529
AluI AGCT 8 cut(s) 62, 208, 661, 695, 1078, 1181, 1372, 1529
AlwI GGATC 7 cut(s) 37, 44, 57, 692, 1160, 1173, 1262
Ama87I CYCGRG 1 cut(s) 1216
AoxI GGCC 1 cut(s) 174
ApeKI GCWGC 8 cut(s) 5, 8, 565, 695, 785, 971, 1070, 1178
ApoI RAATTY 2 cut(s) 998, 1454
Asp700I GAANNNNTTC 1 cut(s) 934
AspLEI GCGC 3 cut(s) 513, 877, 1102
AspS9I GGNCC 2 cut(s) 175, 821
AsuHPI GGTGA 3 cut(s) 86, 389, 479
AvaI CYCGRG 1 cut(s) 1216
AvaII GGWCC 1 cut(s) 821
AxyI CCTNAGG 1 cut(s) 795
BamHI GGATCC 2 cut(s) 49, 1165
BanII GRGCYC 1 cut(s) 389
BauI CACGAG 1 cut(s) 1137
BbsI GAAGAC 1 cut(s) 134
BbvI GCAGC 6 cut(s) 577, 682, 772, 983, 1057, 1190
BccI CCATC 2 cut(s) 65, 343
BceAI ACGGC 1 cut(s) 287
BciT130I CCWGG 3 cut(s) 228, 236, 1500
BclI TGATCA 1 cut(s) 670
BfaI CTAG 3 cut(s) 68, 1103, 1478
BfoI RGCGCY 1 cut(s) 1103
Bme1390I CCNGG 3 cut(s) 228, 236, 1500
Bme18I GGWCC 1 cut(s) 821
BmeT110I CYCGRG 1 cut(s) 1216
BmgT120I GGNCC 2 cut(s) 175, 821
BmiI GGNNCC 6 cut(s) 51, 177, 822, 823, 1055, 1167
BmrFI CCNGG 3 cut(s) 228, 236, 1500
BmsI GCATC 6 cut(s) 157, 862, 874, 940, 1183, 1359
BoxI GACNNNNGTC 1 cut(s) 134
BpiI GAAGAC 1 cut(s) 134
BpmI CTGGAG 3 cut(s) 133, 619, 711
Bpu10I CCTNAGC 1 cut(s) 1203
Bsa29I ATCGAT 1 cut(s) 1547
BsaJI CCNNGG 1 cut(s) 171
BsaXI ACNNNNNCTCC 4 cut(s) 617, 647, 650, 680
Bsc4I CCNNNNNNNGG 2 cut(s) 185, 349
Bse1I ACTGG 2 cut(s) 150, 636
Bse21I CCTNAGG 1 cut(s) 795
Bse3DI GCAATG 2 cut(s) 897, 921
BseBI CCWGG 3 cut(s) 228, 236, 1500
BseCI ATCGAT 1 cut(s) 1547
BseDI CCNNGG 1 cut(s) 171
BseGI GGATG 4 cut(s) 199, 805, 877, 955
BseLI CCNNNNNNNGG 2 cut(s) 185, 349
BseMI GCAATG 2 cut(s) 897, 921
BseMII CTCAG 3 cut(s) 374, 741, 786
BseNI ACTGG 2 cut(s) 150, 636
BseRI GAGGAG 1 cut(s) 568
BseXI GCAGC 6 cut(s) 577, 682, 772, 983, 1057, 1190
BseYI CCCAGC 1 cut(s) 1074
BsgI GTGCAG 1 cut(s) 771
Bsh1236I CGCG 2 cut(s) 413, 729
BshFI GGCC 1 cut(s) 176
BshVI ATCGAT 1 cut(s) 1547
BsiHKCI CYCGRG 1 cut(s) 1216
BslFI GGGAC 1 cut(s) 834
BslI CCNNNNNNNGG 2 cut(s) 185, 349
BsmFI GGGAC 1 cut(s) 834
BsnI GGCC 1 cut(s) 176
BsoBI CYCGRG 1 cut(s) 1216
Bsp1286I GDGCHC 1 cut(s) 389
BspACI CCGC 3 cut(s) 413, 825, 1176
BspANI GGCC 1 cut(s) 176
BspCNI CTCAG 3 cut(s) 375, 742, 787
BspDI ATCGAT 1 cut(s) 1547
BspFNI CGCG 2 cut(s) 413, 729
BspLI GGNNCC 6 cut(s) 51, 177, 822, 823, 1055, 1167
BspPI GGATC 7 cut(s) 37, 44, 57, 692, 1160, 1173, 1262
BspQI GCTCTTC 1 cut(s) 1521
BsrDI GCAATG 2 cut(s) 897, 921
BsrI ACTGG 2 cut(s) 150, 636
BssECI CCNNGG 1 cut(s) 171
BssSI CACGAG 1 cut(s) 1137
Bst2BI CACGAG 1 cut(s) 1137
Bst2UI CCWGG 3 cut(s) 228, 236, 1500
Bst4CI ACNGT 3 cut(s) 133, 619, 1334
Bst6I CTCTTC 3 cut(s) 1030, 1425, 1521
BstC8I GCNNGC 1 cut(s) 210
BstDEI CTNAG 4 cut(s) 383, 750, 795, 1203
BstF5I GGATG 4 cut(s) 199, 805, 877, 955
BstFNI CGCG 2 cut(s) 413, 729
BstH2I RGCGCY 1 cut(s) 1103
BstHHI GCGC 3 cut(s) 513, 877, 1102
BstMWI GCNNNNNNNGC 1 cut(s) 413
BstNI CCWGG 3 cut(s) 228, 236, 1500
BstNSI RCATGY 1 cut(s) 778
BstPAI GACNNNNGTC 1 cut(s) 134
BstSCI CCNGG 3 cut(s) 226, 234, 1498
BstUI CGCG 2 cut(s) 413, 729
BstV1I GCAGC 6 cut(s) 577, 682, 772, 983, 1057, 1190
BstV2I GAAGAC 1 cut(s) 134
BstX2I RGATCY 5 cut(s) 29, 49, 684, 1165, 1267
BstYI RGATCY 5 cut(s) 29, 49, 684, 1165, 1267
Bsu15I ATCGAT 1 cut(s) 1547
Bsu36I CCTNAGG 1 cut(s) 795
BsuRI GGCC 1 cut(s) 176
BsuTUI ATCGAT 1 cut(s) 1547
BtsCI GGATG 4 cut(s) 199, 805, 877, 955
BtsIMutI CAGTG 1 cut(s) 157
Cac8I GCNNGC 1 cut(s) 210
CfoI GCGC 3 cut(s) 513, 877, 1102
Cfr13I GGNCC 2 cut(s) 175, 821
ClaI ATCGAT 1 cut(s) 1547
CseI GACGC 1 cut(s) 419
CsiI ACCWGGT 2 cut(s) 226, 1498
Csp6I GTAC 2 cut(s) 117, 1213
CviAII CATG 6 cut(s) 221, 526, 775, 1030, 1084, 1554
CviQI GTAC 2 cut(s) 117, 1213
DdeI CTNAG 4 cut(s) 383, 750, 795, 1203
DraIII CACNNNGTG 1 cut(s) 185
Eam1104I CTCTTC 3 cut(s) 1030, 1425, 1521
EarI CTCTTC 3 cut(s) 1030, 1425, 1521
Eco24I GRGCYC 1 cut(s) 389
Eco32I GATATC 2 cut(s) 262, 1474
Eco47I GGWCC 1 cut(s) 821
Eco57I CTGAAG 7 cut(s) 75, 105, 567, 647, 909, 960, 1358
Eco81I CCTNAGG 1 cut(s) 795
Eco88I CYCGRG 1 cut(s) 1216
EcoO109I RGGNCCY 2 cut(s) 175, 821
EcoRII CCWGG 3 cut(s) 226, 234, 1498
EcoRV GATATC 2 cut(s) 262, 1474
EcoT38I GRGCYC 1 cut(s) 389
FaeI CATG 6 cut(s) 224, 529, 778, 1033, 1087, 1557
FaqI GGGAC 1 cut(s) 834
FatI CATG 6 cut(s) 220, 525, 774, 1029, 1083, 1553
FauI CCCGC 1 cut(s) 832
FauNDI CATATG 1 cut(s) 345
FbaI TGATCA 1 cut(s) 670
FblI GTMKAC 1 cut(s) 319
FokI GGATG 4 cut(s) 206, 812, 884, 962
FriOI GRGCYC 1 cut(s) 389
FspBI CTAG 3 cut(s) 68, 1103, 1478
GlaI GCGC 3 cut(s) 512, 876, 1101
GsaI CCCAGC 1 cut(s) 1078
GsuI CTGGAG 3 cut(s) 133, 619, 711
HaeII RGCGCY 1 cut(s) 1103
HaeIII GGCC 1 cut(s) 176
HgaI GACGC 1 cut(s) 419
HhaI GCGC 3 cut(s) 513, 877, 1102
Hin1II CATG 6 cut(s) 224, 529, 778, 1033, 1087, 1557
Hin6I GCGC 3 cut(s) 511, 875, 1100
HinP1I GCGC 3 cut(s) 511, 875, 1100
HincII GTYRAC 1 cut(s) 1462
HindII GTYRAC 1 cut(s) 1462
HindIII AAGCTT 3 cut(s) 60, 1370, 1527
HinfI GANTC 5 cut(s) 578, 847, 1022, 1109, 1274
HphI GGTGA 3 cut(s) 86, 389, 479
Hpy166II GTNNAC 5 cut(s) 307, 320, 380, 1213, 1462
Hpy188I TCNGA 4 cut(s) 675, 807, 856, 940
Hpy188III TCNNGA 9 cut(s) 53, 252, 690, 749, 1139, 1169, 1265, 1271, 1520
Hpy8I GTNNAC 5 cut(s) 307, 320, 380, 1213, 1462
Hpy99I CGWCG 1 cut(s) 440
HpyAV CCTTC 4 cut(s) 542, 904, 1030, 1090
HpyCH4III ACNGT 3 cut(s) 133, 619, 1334
HpyCH4IV ACGT 2 cut(s) 833, 1395
HpyCH4V TGCA 8 cut(s) 220, 407, 611, 698, 788, 1004, 1119, 1350
HpyF10VI GCNNNNNNNGC 1 cut(s) 413
HpyF3I CTNAG 4 cut(s) 383, 750, 795, 1203
HpySE526I ACGT 2 cut(s) 833, 1395
Hsp92II CATG 6 cut(s) 224, 529, 778, 1033, 1087, 1557
HspAI GCGC 3 cut(s) 511, 875, 1100
KflI GGGWCCC 1 cut(s) 821
Ksp22I TGATCA 1 cut(s) 670
LguI GCTCTTC 1 cut(s) 1521
LmnI GCTCC 4 cut(s) 288, 658, 692, 1408
Lsp1109I GCAGC 6 cut(s) 577, 682, 772, 983, 1057, 1190
LweI GCATC 6 cut(s) 157, 862, 874, 940, 1183, 1359
MabI ACCWGGT 2 cut(s) 226, 1498
MaeI CTAG 3 cut(s) 68, 1103, 1478
MaeII ACGT 2 cut(s) 833, 1395
MaeIII GTNAC 2 cut(s) 1132, 1445
MboII GAAGA 9 cut(s) 68, 139, 902, 953, 1017, 1118, 1427, 1442, 1508
MfeI CAATTG 1 cut(s) 1257
MflI RGATCY 5 cut(s) 29, 49, 684, 1165, 1267
MhlI GDGCHC 1 cut(s) 389
MluI ACGCGT 1 cut(s) 727
MlyI GAGTC 3 cut(s) 587, 1016, 1268
MmeI TCCRAC 2 cut(s) 7, 907
MroXI GAANNNNTTC 1 cut(s) 934
MseI TTAA 6 cut(s) 90, 141, 245, 432, 1248, 1286
MslI CAYNNNNRTG 1 cut(s) 333
MspA1I CMGCKG 1 cut(s) 1181
MspR9I CCNGG 3 cut(s) 228, 236, 1500
MunI CAATTG 1 cut(s) 1257
MvaI CCWGG 3 cut(s) 228, 236, 1500
MvnI CGCG 2 cut(s) 413, 729
MwoI GCNNNNNNNGC 1 cut(s) 413
NdeI CATATG 1 cut(s) 345
NlaIII CATG 6 cut(s) 224, 529, 778, 1033, 1087, 1557
NlaIV GGNNCC 6 cut(s) 51, 177, 822, 823, 1055, 1167
NmeAIII GCCGAG 1 cut(s) 196
NspI RCATGY 1 cut(s) 778
PaeR7I CTCGAG 1 cut(s) 1216
PciSI GCTCTTC 1 cut(s) 1521
PdmI GAANNNNTTC 1 cut(s) 934
PfeI GAWTC 2 cut(s) 847, 1109
PflMI CCANNNNNTGG 2 cut(s) 185, 349
PfoI TCCNGGA 1 cut(s) 234
PleI GAGTC 3 cut(s) 586, 1016, 1268
PpsI GAGTC 3 cut(s) 586, 1016, 1268
PpuMI RGGWCCY 1 cut(s) 821
PshAI GACNNNNGTC 1 cut(s) 134
Psp1406I AACGTT 1 cut(s) 833
Psp5II RGGWCCY 1 cut(s) 821
Psp6I CCWGG 3 cut(s) 226, 234, 1498
PspFI CCCAGC 1 cut(s) 1074
PspGI CCWGG 3 cut(s) 226, 234, 1498
PspN4I GGNNCC 6 cut(s) 51, 177, 822, 823, 1055, 1167
PspPI GGNCC 2 cut(s) 175, 821
PspPPI RGGWCCY 1 cut(s) 821
PspXI VCTCGAGB 1 cut(s) 1216
PsuI RGATCY 5 cut(s) 29, 49, 684, 1165, 1267
PvuII CAGCTG 1 cut(s) 1181
RsaI GTAC 2 cut(s) 118, 1214
RsaNI GTAC 2 cut(s) 117, 1213
RseI CAYNNNNRTG 1 cut(s) 333
SapI GCTCTTC 1 cut(s) 1521
SaqAI TTAA 6 cut(s) 90, 141, 245, 432, 1248, 1286
Sau96I GGNCC 2 cut(s) 175, 821
SchI GAGTC 3 cut(s) 587, 1016, 1268
ScrFI CCNGG 3 cut(s) 228, 236, 1500
SduI GDGCHC 1 cut(s) 389
SexAI ACCWGGT 2 cut(s) 226, 1498
SfaNI GCATC 6 cut(s) 157, 862, 874, 940, 1183, 1359
Sfr274I CTCGAG 1 cut(s) 1216
SinI GGWCC 1 cut(s) 821
SlaI CTCGAG 1 cut(s) 1216
SmiMI CAYNNNNRTG 1 cut(s) 333
SmlI CTYRAG 1 cut(s) 1216
SmoI CTYRAG 1 cut(s) 1216
SsiI CCGC 3 cut(s) 413, 825, 1176
SspI AATATT 1 cut(s) 456
SspMI CTAG 3 cut(s) 68, 1103, 1478
StyD4I CCNGG 3 cut(s) 226, 234, 1498
TaaI ACNGT 3 cut(s) 133, 619, 1334
TaiI ACGT 2 cut(s) 836, 1398
TaqI TCGA 5 cut(s) 45, 961, 1217, 1521, 1547
TatI WGTACW 2 cut(s) 116, 1212
TauI GCSGC 2 cut(s) 416, 1178
TfiI GAWTC 2 cut(s) 847, 1109
Tru1I TTAA 6 cut(s) 90, 141, 245, 432, 1248, 1286
Tru9I TTAA 6 cut(s) 90, 141, 245, 432, 1248, 1286
TscAI CASTG 1 cut(s) 157
TseI GCWGC 8 cut(s) 5, 8, 565, 695, 785, 971, 1070, 1178
TspDTI ATGAA 5 cut(s) 237, 827, 1072, 1158, 1539
TspGWI ACGGA 1 cut(s) 453
TspRI CASTG 1 cut(s) 157
Van91I CCANNNNNTGG 2 cut(s) 185, 349
VpaK11BI GGWCC 1 cut(s) 821
XapI RAATTY 2 cut(s) 998, 1454
XceI RCATGY 1 cut(s) 778
XhoI CTCGAG 1 cut(s) 1216
XmiI GTMKAC 1 cut(s) 319
XmnI GAANNNNTTC 1 cut(s) 934
XspI CTAG 3 cut(s) 68, 1103, 1478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.