Malate dehydrogenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04410 AT5G43330 |
| fragaria_vesca | FvH4_4g03630 |
| malus_domestica | MD13G1214000.v1.1 MD16G1219000.v1.1 |
| prunus_persica | Prupe.1G039300_v2.0.a1 Prupe.1G039300_v2.0.a1 |
| pyrus_communis | pycom13g18720 pycom16g18250 |
| rosa_chinensis | RchiOBHm_Chr4g0393011 |
| rosa_laevigata | RLG00000009775 |
| rosa_multiflora | Rmu_sc0008339.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00338110 |
| rosa_rugosa | Rorug04G0003000 |
| rosa_samantha | Rh4BG041300 Rh4CG048900 |
| rosa_wichuraiana | Rw4G003570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 124 |
| AccBSI | CCGCTC | 1 cut(s) | 365 |
| AccI | GTMKAC | 1 cut(s) | 816 |
| AciI | CCGC | 1 cut(s) | 363 |
| AclWI | GGATC | 1 cut(s) | 412 |
| AcoI | YGGCCR | 1 cut(s) | 390 |
| AcsI | RAATTY | 2 cut(s) | 428, 668 |
| AcuI | CTGAAG | 1 cut(s) | 165 |
| AfaI | GTAC | 5 cut(s) | 66, 238, 578, 796, 983 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 124, 487, 772 |
| AflIII | ACRYGT | 1 cut(s) | 120 |
| AgsI | TTSAA | 2 cut(s) | 154, 686 |
| AleI | CACNNNNGTG | 1 cut(s) | 765 |
| AluBI | AGCT | 7 cut(s) | 38, 140, 149, 637, 698, 747, 958 |
| AluI | AGCT | 7 cut(s) | 38, 140, 149, 637, 698, 747, 958 |
| Alw21I | GWGCWC | 3 cut(s) | 27, 639, 960 |
| Alw26I | GTCTC | 2 cut(s) | 339, 879 |
| AlwI | GGATC | 1 cut(s) | 412 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 143, 530 |
| Ama87I | CYCGRG | 1 cut(s) | 274 |
| AoxI | GGCC | 2 cut(s) | 390, 904 |
| ApeKI | GCWGC | 7 cut(s) | 38, 140, 182, 341, 344, 698, 740 |
| ApoI | RAATTY | 2 cut(s) | 428, 668 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 15 |
| AspLEI | GCGC | 1 cut(s) | 733 |
| AspS9I | GGNCC | 1 cut(s) | 775 |
| AsuC2I | CCSGG | 1 cut(s) | 398 |
| AsuNHI | GCTAGC | 1 cut(s) | 743 |
| AvaI | CYCGRG | 1 cut(s) | 274 |
| AvaII | GGWCC | 1 cut(s) | 775 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 786, 819 |
| BalI | TGGCCA | 1 cut(s) | 392 |
| BanII | GRGCYC | 2 cut(s) | 639, 960 |
| Bbv12I | GWGCWC | 3 cut(s) | 27, 639, 960 |
| BbvI | GCAGC | 7 cut(s) | 25, 127, 169, 328, 331, 685, 727 |
| BccI | CCATC | 6 cut(s) | 160, 332, 445, 818, 850, 931 |
| BceAI | ACGGC | 1 cut(s) | 209 |
| BclI | TGATCA | 1 cut(s) | 546 |
| BcnI | CCSGG | 1 cut(s) | 398 |
| BcoDI | GTCTC | 2 cut(s) | 339, 879 |
| BfaI | CTAG | 2 cut(s) | 726, 744 |
| BfmI | CTRYAG | 3 cut(s) | 39, 678, 948 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 398 |
| BglII | AGATCT | 1 cut(s) | 501 |
| BisI | GCNGC | 8 cut(s) | 39, 141, 183, 342, 345, 363, 699, 741 |
| BlsI | GCNGC | 8 cut(s) | 40, 142, 184, 343, 346, 364, 700, 742 |
| Bme1390I | CCNGG | 1 cut(s) | 398 |
| Bme18I | GGWCC | 1 cut(s) | 775 |
| BmeT110I | CYCGRG | 1 cut(s) | 274 |
| BmgT120I | GGNCC | 1 cut(s) | 775 |
| BmiI | GGNNCC | 1 cut(s) | 776 |
| BmrFI | CCNGG | 1 cut(s) | 398 |
| BmrI | ACTGGG | 1 cut(s) | 781 |
| BmsI | GCATC | 3 cut(s) | 169, 211, 640 |
| BmtI | GCTAGC | 1 cut(s) | 747 |
| BmuI | ACTGGG | 1 cut(s) | 781 |
| BpmI | CTGGAG | 6 cut(s) | 54, 120, 261, 636, 771, 910 |
| BpuEI | CTTGAG | 2 cut(s) | 407, 944 |
| BpuMI | CCSGG | 1 cut(s) | 398 |
| Bsa29I | ATCGAT | 1 cut(s) | 177 |
| BsaJI | CCNNGG | 5 cut(s) | 275, 348, 778, 807, 901 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 234, 264 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 124, 487, 772 |
| Bse1I | ACTGG | 6 cut(s) | 14, 37, 244, 524, 776, 893 |
| Bse3DI | GCAATG | 1 cut(s) | 886 |
| BseCI | ATCGAT | 1 cut(s) | 177 |
| BseDI | CCNNGG | 5 cut(s) | 275, 348, 778, 807, 901 |
| BseGI | GGATG | 4 cut(s) | 239, 307, 566, 762 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 124, 487, 772 |
| BseMI | GCAATG | 1 cut(s) | 886 |
| BseMII | CTCAG | 2 cut(s) | 350, 498 |
| BseNI | ACTGG | 6 cut(s) | 14, 37, 244, 524, 776, 893 |
| BseRI | GAGGAG | 1 cut(s) | 968 |
| BseXI | GCAGC | 7 cut(s) | 25, 127, 169, 328, 331, 685, 727 |
| BsgI | GTGCAG | 1 cut(s) | 623 |
| BshFI | GGCC | 2 cut(s) | 392, 906 |
| BshVI | ATCGAT | 1 cut(s) | 177 |
| BsiHKAI | GWGCWC | 3 cut(s) | 27, 639, 960 |
| BsiHKCI | CYCGRG | 1 cut(s) | 274 |
| BsiSI | CCGG | 1 cut(s) | 398 |
| BslFI | GGGAC | 1 cut(s) | 510 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 124, 487, 772 |
| BsmAI | GTCTC | 2 cut(s) | 339, 879 |
| BsmFI | GGGAC | 1 cut(s) | 510 |
| BsnI | GGCC | 2 cut(s) | 392, 906 |
| BsoBI | CYCGRG | 1 cut(s) | 274 |
| Bsp1286I | GDGCHC | 3 cut(s) | 27, 639, 960 |
| Bsp143I | GATC | 4 cut(s) | 174, 417, 501, 546 |
| Bsp19I | CCATGG | 1 cut(s) | 807 |
| BspACI | CCGC | 1 cut(s) | 363 |
| BspANI | GGCC | 2 cut(s) | 392, 906 |
| BspCNI | CTCAG | 2 cut(s) | 349, 499 |
| BspDI | ATCGAT | 1 cut(s) | 177 |
| BspLI | GGNNCC | 1 cut(s) | 776 |
| BspMAI | CTGCAG | 2 cut(s) | 43, 952 |
| BspOI | GCTAGC | 1 cut(s) | 747 |
| BspPI | GGATC | 1 cut(s) | 412 |
| BsrBI | CCGCTC | 1 cut(s) | 365 |
| BsrDI | GCAATG | 1 cut(s) | 886 |
| BsrI | ACTGG | 6 cut(s) | 14, 37, 244, 524, 776, 893 |
| BssECI | CCNNGG | 5 cut(s) | 275, 348, 778, 807, 901 |
| BssMI | GATC | 4 cut(s) | 174, 417, 501, 546 |
| BssNAI | GTATAC | 1 cut(s) | 817 |
| BssT1I | CCWWGG | 4 cut(s) | 348, 778, 807, 901 |
| Bst1107I | GTATAC | 1 cut(s) | 817 |
| Bst4CI | ACNGT | 3 cut(s) | 158, 576, 682 |
| Bst6I | CTCTTC | 2 cut(s) | 198, 960 |
| BstC8I | GCNNGC | 3 cut(s) | 360, 521, 745 |
| BstDEI | CTNAG | 2 cut(s) | 336, 507 |
| BstDSI | CCRYGG | 1 cut(s) | 807 |
| BstF5I | GGATG | 4 cut(s) | 239, 307, 566, 762 |
| BstHHI | GCGC | 1 cut(s) | 733 |
| BstKTI | GATC | 4 cut(s) | 177, 420, 504, 549 |
| BstMAI | GTCTC | 2 cut(s) | 339, 879 |
| BstMBI | GATC | 4 cut(s) | 174, 417, 501, 546 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 146, 398, 737, 749, 834 |
| BstNSI | RCATGY | 2 cut(s) | 124, 362 |
| BstSCI | CCNGG | 1 cut(s) | 396 |
| BstSFI | CTRYAG | 3 cut(s) | 39, 678, 948 |
| BstV1I | GCAGC | 7 cut(s) | 25, 127, 169, 328, 331, 685, 727 |
| BstX2I | RGATCY | 1 cut(s) | 501 |
| BstYI | RGATCY | 1 cut(s) | 501 |
| BstZ17I | GTATAC | 1 cut(s) | 817 |
| Bsu15I | ATCGAT | 1 cut(s) | 177 |
| BsuRI | GGCC | 2 cut(s) | 392, 906 |
| BsuTUI | ATCGAT | 1 cut(s) | 177 |
| BtgI | CCRYGG | 1 cut(s) | 807 |
| BtsCI | GGATG | 4 cut(s) | 239, 307, 566, 762 |
| BtsIMutI | CAGTG | 1 cut(s) | 531 |
| Cac8I | GCNNGC | 3 cut(s) | 360, 521, 745 |
| CaiI | CAGNNNCTG | 2 cut(s) | 143, 530 |
| CfoI | GCGC | 1 cut(s) | 733 |
| Cfr13I | GGNCC | 1 cut(s) | 775 |
| ClaI | ATCGAT | 1 cut(s) | 177 |
| Csp6I | GTAC | 5 cut(s) | 65, 237, 577, 795, 982 |
| CviAII | CATG | 7 cut(s) | 88, 121, 359, 593, 654, 808, 987 |
| CviQI | GTAC | 5 cut(s) | 65, 237, 577, 795, 982 |
| DdeI | CTNAG | 2 cut(s) | 336, 507 |
| DpnI | GATC | 4 cut(s) | 176, 419, 503, 548 |
| DpnII | GATC | 4 cut(s) | 174, 417, 501, 546 |
| EaeI | YGGCCR | 1 cut(s) | 390 |
| Eam1104I | CTCTTC | 2 cut(s) | 198, 960 |
| EarI | CTCTTC | 2 cut(s) | 198, 960 |
| Ecl136II | GAGCTC | 2 cut(s) | 637, 958 |
| Eco130I | CCWWGG | 4 cut(s) | 348, 778, 807, 901 |
| Eco147I | AGGCCT | 1 cut(s) | 906 |
| Eco24I | GRGCYC | 2 cut(s) | 639, 960 |
| Eco47I | GGWCC | 1 cut(s) | 775 |
| Eco53kI | GAGCTC | 2 cut(s) | 637, 958 |
| Eco57I | CTGAAG | 1 cut(s) | 165 |
| Eco88I | CYCGRG | 1 cut(s) | 274 |
| EcoICRI | GAGCTC | 2 cut(s) | 637, 958 |
| EcoO109I | RGGNCCY | 1 cut(s) | 775 |
| EcoT14I | CCWWGG | 4 cut(s) | 348, 778, 807, 901 |
| EcoT22I | ATGCAT | 1 cut(s) | 655 |
| EcoT38I | GRGCYC | 2 cut(s) | 639, 960 |
| ErhI | CCWWGG | 4 cut(s) | 348, 778, 807, 901 |
| FaeI | CATG | 7 cut(s) | 91, 124, 362, 596, 657, 811, 990 |
| FaqI | GGGAC | 1 cut(s) | 510 |
| FatI | CATG | 7 cut(s) | 87, 120, 358, 592, 653, 807, 986 |
| FbaI | TGATCA | 1 cut(s) | 546 |
| FblI | GTMKAC | 1 cut(s) | 816 |
| Fnu4HI | GCNGC | 8 cut(s) | 39, 141, 183, 342, 345, 363, 699, 741 |
| FokI | GGATG | 4 cut(s) | 246, 314, 553, 749 |
| FriOI | GRGCYC | 2 cut(s) | 639, 960 |
| Fsp4HI | GCNGC | 8 cut(s) | 39, 141, 183, 342, 345, 363, 699, 741 |
| FspBI | CTAG | 2 cut(s) | 726, 744 |
| GlaI | GCGC | 1 cut(s) | 732 |
| GluI | GCNGC | 8 cut(s) | 39, 141, 183, 342, 345, 363, 699, 741 |
| GsuI | CTGGAG | 6 cut(s) | 54, 120, 261, 636, 771, 910 |
| HaeIII | GGCC | 2 cut(s) | 392, 906 |
| HapII | CCGG | 1 cut(s) | 398 |
| HhaI | GCGC | 1 cut(s) | 733 |
| Hin1II | CATG | 7 cut(s) | 91, 124, 362, 596, 657, 811, 990 |
| Hin6I | GCGC | 1 cut(s) | 731 |
| HinP1I | GCGC | 1 cut(s) | 731 |
| HincII | GTYRAC | 1 cut(s) | 589 |
| HindII | GTYRAC | 1 cut(s) | 589 |
| HindIII | AAGCTT | 1 cut(s) | 147 |
| HinfI | GANTC | 1 cut(s) | 243 |
| HpaII | CCGG | 1 cut(s) | 398 |
| Hpy166II | GTNNAC | 2 cut(s) | 589, 817 |
| Hpy188I | TCNGA | 5 cut(s) | 53, 508, 532, 823, 912 |
| Hpy188III | TCNNGA | 4 cut(s) | 274, 615, 788, 846 |
| Hpy8I | GTNNAC | 2 cut(s) | 589, 817 |
| HpyAV | CCTTC | 5 cut(s) | 278, 292, 871, 917, 964 |
| HpyCH4III | ACNGT | 3 cut(s) | 158, 576, 682 |
| HpyCH4IV | ACGT | 3 cut(s) | 543, 691, 797 |
| HpyCH4V | TGCA | 8 cut(s) | 41, 77, 375, 434, 604, 653, 701, 950 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 146, 398, 737, 749, 834 |
| HpyF3I | CTNAG | 2 cut(s) | 336, 507 |
| HpySE526I | ACGT | 3 cut(s) | 543, 691, 797 |
| Hsp92II | CATG | 7 cut(s) | 91, 124, 362, 596, 657, 811, 990 |
| HspAI | GCGC | 1 cut(s) | 731 |
| Ksp22I | TGATCA | 1 cut(s) | 546 |
| Kzo9I | GATC | 4 cut(s) | 174, 417, 501, 546 |
| LmnI | GCTCC | 4 cut(s) | 35, 370, 695, 955 |
| Lsp1109I | GCAGC | 7 cut(s) | 25, 127, 169, 328, 331, 685, 727 |
| LweI | GCATC | 3 cut(s) | 169, 211, 640 |
| MaeI | CTAG | 2 cut(s) | 726, 744 |
| MaeII | ACGT | 3 cut(s) | 543, 691, 797 |
| MaeIII | GTNAC | 4 cut(s) | 28, 755, 767, 868 |
| MalI | GATC | 4 cut(s) | 176, 419, 503, 548 |
| MbiI | CCGCTC | 1 cut(s) | 365 |
| MboI | GATC | 4 cut(s) | 174, 417, 501, 546 |
| MboII | GAAGA | 4 cut(s) | 185, 943, 946, 977 |
| MflI | RGATCY | 1 cut(s) | 501 |
| MhlI | GDGCHC | 3 cut(s) | 27, 639, 960 |
| MlsI | TGGCCA | 1 cut(s) | 392 |
| MluCI | AATT | 2 cut(s) | 428, 668 |
| MluNI | TGGCCA | 1 cut(s) | 392 |
| MlyI | GAGTC | 1 cut(s) | 252 |
| MmeI | TCCRAC | 2 cut(s) | 105, 639 |
| Mox20I | TGGCCA | 1 cut(s) | 392 |
| Mph1103I | ATGCAT | 1 cut(s) | 655 |
| MroXI | GAANNNNTTC | 1 cut(s) | 15 |
| MscI | TGGCCA | 1 cut(s) | 392 |
| MseI | TTAA | 4 cut(s) | 162, 198, 537, 997 |
| MslI | CAYNNNNRTG | 1 cut(s) | 765 |
| Msp20I | TGGCCA | 1 cut(s) | 392 |
| MspA1I | CMGCKG | 1 cut(s) | 140 |
| MspI | CCGG | 1 cut(s) | 398 |
| MspR9I | CCNGG | 1 cut(s) | 398 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 146, 398, 737, 749, 834 |
| NciI | CCSGG | 1 cut(s) | 398 |
| NcoI | CCATGG | 1 cut(s) | 807 |
| NdeII | GATC | 4 cut(s) | 174, 417, 501, 546 |
| NheI | GCTAGC | 1 cut(s) | 743 |
| NlaIII | CATG | 7 cut(s) | 91, 124, 362, 596, 657, 811, 990 |
| NlaIV | GGNNCC | 1 cut(s) | 776 |
| NmuCI | GTSAC | 2 cut(s) | 755, 767 |
| NsiI | ATGCAT | 1 cut(s) | 655 |
| NspI | RCATGY | 2 cut(s) | 124, 362 |
| OliI | CACNNNNGTG | 1 cut(s) | 765 |
| PaeI | GCATGC | 1 cut(s) | 362 |
| PceI | AGGCCT | 1 cut(s) | 906 |
| PciI | ACATGT | 1 cut(s) | 120 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 645 |
| PdmI | GAANNNNTTC | 1 cut(s) | 15 |
| PflFI | GACNNNGTC | 2 cut(s) | 610, 773 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 124 |
| PkrI | GCNGC | 8 cut(s) | 40, 142, 184, 343, 346, 364, 700, 742 |
| PleI | GAGTC | 1 cut(s) | 251 |
| PpsI | GAGTC | 1 cut(s) | 251 |
| PpuMI | RGGWCCY | 1 cut(s) | 775 |
| PscI | ACATGT | 1 cut(s) | 120 |
| Psp124BI | GAGCTC | 2 cut(s) | 639, 960 |
| Psp5II | RGGWCCY | 1 cut(s) | 775 |
| PspN4I | GGNNCC | 1 cut(s) | 776 |
| PspPI | GGNCC | 1 cut(s) | 775 |
| PspPPI | RGGWCCY | 1 cut(s) | 775 |
| PstI | CTGCAG | 2 cut(s) | 43, 952 |
| PstNI | CAGNNNCTG | 2 cut(s) | 143, 530 |
| PsuI | RGATCY | 1 cut(s) | 501 |
| PsyI | GACNNNGTC | 2 cut(s) | 610, 773 |
| PvuII | CAGCTG | 1 cut(s) | 140 |
| RsaI | GTAC | 5 cut(s) | 66, 238, 578, 796, 983 |
| RsaNI | GTAC | 5 cut(s) | 65, 237, 577, 795, 982 |
| RseI | CAYNNNNRTG | 1 cut(s) | 765 |
| SacI | GAGCTC | 2 cut(s) | 639, 960 |
| SaqAI | TTAA | 4 cut(s) | 162, 198, 537, 997 |
| SatI | GCNGC | 8 cut(s) | 39, 141, 183, 342, 345, 363, 699, 741 |
| Sau3AI | GATC | 4 cut(s) | 174, 417, 501, 546 |
| Sau96I | GGNCC | 1 cut(s) | 775 |
| SchI | GAGTC | 1 cut(s) | 252 |
| ScrFI | CCNGG | 1 cut(s) | 398 |
| SduI | GDGCHC | 3 cut(s) | 27, 639, 960 |
| SfaNI | GCATC | 3 cut(s) | 169, 211, 640 |
| SfcI | CTRYAG | 3 cut(s) | 39, 678, 948 |
| SinI | GGWCC | 1 cut(s) | 775 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 765 |
| SmlI | CTYRAG | 2 cut(s) | 422, 959 |
| SmoI | CTYRAG | 2 cut(s) | 422, 959 |
| SphI | GCATGC | 1 cut(s) | 362 |
| Sse9I | AATT | 2 cut(s) | 428, 668 |
| SseBI | AGGCCT | 1 cut(s) | 906 |
| SsiI | CCGC | 1 cut(s) | 363 |
| SspMI | CTAG | 2 cut(s) | 726, 744 |
| SstI | GAGCTC | 2 cut(s) | 639, 960 |
| StuI | AGGCCT | 1 cut(s) | 906 |
| StyD4I | CCNGG | 1 cut(s) | 396 |
| StyI | CCWWGG | 4 cut(s) | 348, 778, 807, 901 |
| TaaI | ACNGT | 3 cut(s) | 158, 576, 682 |
| TaiI | ACGT | 3 cut(s) | 546, 694, 800 |
| TaqI | TCGA | 1 cut(s) | 177 |
| TasI | AATT | 2 cut(s) | 428, 668 |
| TatI | WGTACW | 1 cut(s) | 236 |
| TauI | GCSGC | 1 cut(s) | 365 |
| Tru1I | TTAA | 4 cut(s) | 162, 198, 537, 997 |
| Tru9I | TTAA | 4 cut(s) | 162, 198, 537, 997 |
| TscAI | CASTG | 1 cut(s) | 531 |
| TseFI | GTSAC | 2 cut(s) | 755, 767 |
| TseI | GCWGC | 7 cut(s) | 38, 140, 182, 341, 344, 698, 740 |
| Tsp45I | GTSAC | 2 cut(s) | 755, 767 |
| TspDTI | ATGAA | 1 cut(s) | 933 |
| TspGWI | ACGGA | 3 cut(s) | 620, 678, 755 |
| TspRI | CASTG | 1 cut(s) | 531 |
| Tth111I | GACNNNGTC | 2 cut(s) | 610, 773 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 124 |
| VpaK11BI | GGWCC | 1 cut(s) | 775 |
| XapI | RAATTY | 2 cut(s) | 428, 668 |
| XceI | RCATGY | 2 cut(s) | 124, 362 |
| XmiI | GTMKAC | 1 cut(s) | 816 |
| XmnI | GAANNNNTTC | 1 cut(s) | 15 |
| XspI | CTAG | 2 cut(s) | 726, 744 |
| Zsp2I | ATGCAT | 1 cut(s) | 655 |