Rorug04G0003000

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000144
Physical Location & Seq
Reverse (-)
602248 .. 609352
7105 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0003000.1

Sequence Viewer

Length: 1683 bp
ATGGCTGCAATTGATGTTCTCAAGTATGCTCATAGTCCTGCACACAAAGCCATAGTCACCAAGGACTATGCCAGTCTCAGGAGGATTCTTGCTGCTCTTCCGCGGCTCTCTAATCCTGCCGAGATTCAAACTGAGTCAGCTTCATTAGCTGAAGAAGAGAAGGCCGAAGCCATTGCTGCCGTCATTGATCGACGGGATGTCCCAAACCGTGACACCCCTCTTCACTTGGCTGTCAAACTTGGGGACCAGACAGCCACTGAAATGCTTATGGTTGCCGGGGCAGACTGGAGCTTGCAGAATGAGCAGGGGTGGAGTGCACTCCAGGAAGCAATTTGCAATAGAGAAGAAGCAATTTCCATGATTATAGTTAGGCACTATCAGCCATTGGCTTGGGCAAAATGGTGCAGAAGGTTGCCTCGTTTAATTGGAACTATGCGGAGGATGAGAGACTTCTACATGGAAATTACATTCCACTTCGAGAGTTCTGTGATTCCTTTCATTTCAAGGATTGCTCCATCAGACACATACAAGATCTGGAAAAGGGGTGCAAATTTGAGAGCAGACATGACATTGGCTGGTTTCGATGGTTTTAGGATTCAGCGTTCTGATCAGAGTGTTCTTTTTCTTGGTGATGGGTCTGACGATGGCAAGGTGCCTCCTGGGTCACTTTGCATGATCTCACACAAGGATAGGGAGGTGATGAATGCCTTGGATGGTGCTGGGTCTCAAGCAACTGAAGAAGAGGTTCGGCAAGAGGTGGTTGCAATGTCTCAGACTAATATATTCAGGCCTGGCATTGATGTGACTCAGGCAGTTCTCTTACCTCAGTTGACTTGGAGGCGGCAGGAGAAAACAGAAACGGTTGGATCATGGAAGGCTAAGGTATATGATATGCATAATGTGGTTGTGAGTATCAAGTCTAGGCAGGTCCCTGGGGCTATGACAGATGATGAGTTTTTCTCATCTTGCAATGAAAATGAAACAGAAAGTGAGGAACTTGATGATATTTTGACAGAGGATGAGAGGAGGCAACTTGAAGTTGCACTGAAACTGGATTCATCTGAATCGACCAACGAGAGTGGTGATGGAATTATTGAGCATCGTCATAGTTGTTATGAGGCAAGAGAAATTCCTGTTGAGGATGTAAGCAATTGTAGAAATGGAGAGACCAAGCAGGAAAAGAAAGGATGGTTTGGTGGATGGAGGAAACGAGATACCAAAAATGAAGGACATAAAAAGACTGTCCCACCAAGAAGTTCTCTTTGTGTGGATGAGAAGGTGAGTGATCTGCTAGGAGATTCTCCATCCAGAAATCAAAGCAGACCCAGAAGAAATAATGTGGACGCTGTTGTGAGGGGCGATGATCACAGGAGAGGAAGGGATATAAAAGCATCTTCCTCGCTGGGTTCTGATAGCAGAAGTCGTCATAAGGATGCAAGCAAGGAGAATGAGTATAAGAAAGGGCTAAGGCCTATTCTCTGGCTTTCCCCCAACTTTCCGCTACAAACAGAGGAACTGTTGCCGTTGCTTGATATTCTAGCAAACAAGGTTAAGGCCATCCGTCGTTTGAGGGAACTGCTTACTACCAAACTTCCGGTGGGAACATTTCCCGTCAAGTTTCTGAGTGGTTCCCATGTGTTTACATCTAGGTTGCTATCCCAGTGGTTCCCACTATCAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

560

Amino Acids

63.28

Weight (kDa)

6.54

Isoelectric Point (pI)

65.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANKRD13_C PF11904 186 - 539 6.7e-96 ANKRD13 C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 916
AccB1I GGYRCC 1 cut(s) 652
AccII CGCG 1 cut(s) 103
AciI CCGC 5 cut(s) 101, 103, 436, 841, 1499
AclWI GGATC 1 cut(s) 874
AcsI RAATTY 2 cut(s) 550, 1128
AcuI CTGAAG 2 cut(s) 171, 756
AfiI CCNNNNNNNGG 1 cut(s) 78
AgsI TTSAA 3 cut(s) 128, 504, 1037
AhdI GACNNNNNGTC 1 cut(s) 197
AjnI CCWGG 4 cut(s) 321, 658, 790, 931
AloI GAACNNNNNNTCC 2 cut(s) 586, 618
AluBI AGCT 3 cut(s) 140, 149, 291
AluI AGCT 3 cut(s) 140, 149, 291
Alw21I GWGCWC 1 cut(s) 319
Alw26I GTCTC 5 cut(s) 80, 441, 729, 774, 1160
Alw44I GTGCAC 1 cut(s) 315
AlwI GGATC 1 cut(s) 874
AlwNI CAGNNNCTG 1 cut(s) 257
AoxI GGCC 4 cut(s) 162, 788, 1469, 1554
ApaLI GTGCAC 1 cut(s) 315
ApeKI GCWGC 3 cut(s) 5, 92, 176
ApoI RAATTY 2 cut(s) 550, 1128
ArsI GACNNNNNNTTYG 2 cut(s) 39, 71
Asp700I GAANNNNTTC 1 cut(s) 744
AspS9I GGNCC 2 cut(s) 244, 928
AsuC2I CCSGG 1 cut(s) 277
AsuHPI GGTGA 5 cut(s) 49, 641, 709, 1094, 1291
AvaII GGWCC 2 cut(s) 244, 928
BaeGI GKGCMC 1 cut(s) 319
BanI GGYRCC 1 cut(s) 652
Bbv12I GWGCWC 1 cut(s) 319
BbvI GCAGC 2 cut(s) 79, 163
BceAI ACGGC 2 cut(s) 164, 1507
BcgI CGANNNNNNTGC 4 cut(s) 155, 189, 1380, 1414
BciT130I CCWGG 4 cut(s) 323, 660, 792, 933
BclI TGATCA 2 cut(s) 607, 1363
BcnI CCSGG 1 cut(s) 277
BcoDI GTCTC 5 cut(s) 80, 441, 729, 774, 1160
BfaI CTAG 4 cut(s) 921, 1292, 1538, 1647
BfuAI ACCTGC 1 cut(s) 916
BglII AGATCT 1 cut(s) 531
BisI GCNGC 5 cut(s) 6, 93, 104, 177, 842
BlsI GCNGC 5 cut(s) 7, 94, 105, 178, 843
Bme1390I CCNGG 5 cut(s) 277, 323, 660, 792, 933
Bme18I GGWCC 2 cut(s) 244, 928
BmeRI GACNNNNNGTC 1 cut(s) 197
BmgT120I GGNCC 2 cut(s) 244, 928
BmiI GGNNCC 5 cut(s) 245, 654, 930, 1630, 1667
BmrFI CCNGG 5 cut(s) 277, 323, 660, 792, 933
BmrI ACTGGG 1 cut(s) 1654
BmsI GCATC 3 cut(s) 1108, 1400, 1423
BmuI ACTGGG 1 cut(s) 1654
BplI GAGNNNNNCTC 2 cut(s) 944, 976
BpmI CTGGAG 2 cut(s) 305, 307
Bpu10I CCTNAGC 2 cut(s) 879, 1466
BpuEI CTTGAG 2 cut(s) 5, 711
BpuMI CCSGG 1 cut(s) 277
BsaI GGTCTC 2 cut(s) 729, 1160
BsaJI CCNNGG 7 cut(s) 60, 101, 276, 659, 708, 931, 932
BsaWI WCCGGW 1 cut(s) 1594
BsaXI ACNNNNNCTCC 2 cut(s) 1436, 1466
Bsc4I CCNNNNNNNGG 1 cut(s) 78
Bse1I ACTGG 4 cut(s) 72, 290, 1056, 1660
Bse3DI GCAATG 3 cut(s) 171, 771, 976
BseBI CCWGG 4 cut(s) 323, 660, 792, 933
BseDI CCNNGG 7 cut(s) 60, 101, 276, 659, 708, 931, 932
BseLI CCNNNNNNNGG 1 cut(s) 78
BseMI GCAATG 3 cut(s) 171, 771, 976
BseMII CTCAG 6 cut(s) 91, 123, 785, 821, 839, 1613
BseNI ACTGG 4 cut(s) 72, 290, 1056, 1660
BseRI GAGGAG 1 cut(s) 1039
BseSI GKGCMC 1 cut(s) 319
BseXI GCAGC 2 cut(s) 79, 163
BseYI CCCAGC 2 cut(s) 719, 1402
BsgI GTGCAG 2 cut(s) 24, 424
Bsh1236I CGCG 1 cut(s) 103
BshFI GGCC 4 cut(s) 164, 790, 1471, 1556
BshNI GGYRCC 1 cut(s) 652
BsiHKAI GWGCWC 1 cut(s) 319
BsiSI CCGG 2 cut(s) 276, 1595
BslFI GGGAC 4 cut(s) 185, 257, 914, 1229
BslI CCNNNNNNNGG 1 cut(s) 78
BsmAI GTCTC 5 cut(s) 80, 441, 729, 774, 1160
BsmFI GGGAC 4 cut(s) 185, 257, 914, 1229
BsmI GAATGC 1 cut(s) 709
BsnI GGCC 4 cut(s) 164, 790, 1471, 1556
Bso31I GGTCTC 2 cut(s) 729, 1160
Bsp1286I GDGCHC 1 cut(s) 319
Bsp143I GATC 7 cut(s) 187, 531, 607, 675, 866, 1285, 1363
BspACI CCGC 5 cut(s) 101, 103, 436, 841, 1499
BspANI GGCC 4 cut(s) 164, 790, 1471, 1556
BspCNI CTCAG 6 cut(s) 90, 124, 784, 820, 838, 1614
BspFNI CGCG 1 cut(s) 103
BspLI GGNNCC 5 cut(s) 245, 654, 930, 1630, 1667
BspMI ACCTGC 1 cut(s) 916
BspPI GGATC 1 cut(s) 874
BspQI GCTCTTC 1 cut(s) 102
BspT107I GGYRCC 1 cut(s) 652
BspTNI GGTCTC 2 cut(s) 729, 1160
BsrDI GCAATG 3 cut(s) 171, 771, 976
BsrI ACTGG 4 cut(s) 72, 290, 1056, 1660
BssECI CCNNGG 7 cut(s) 60, 101, 276, 659, 708, 931, 932
BssMI GATC 7 cut(s) 187, 531, 607, 675, 866, 1285, 1363
BssT1I CCWWGG 2 cut(s) 60, 708
Bst2UI CCWGG 4 cut(s) 323, 660, 792, 933
Bst4CI ACNGT 4 cut(s) 209, 862, 1243, 1518
Bst6I CTCTTC 4 cut(s) 102, 150, 225, 735
BstC8I GCNNGC 2 cut(s) 293, 1438
BstDEI CTNAG 8 cut(s) 77, 132, 771, 807, 825, 879, 1466, 1622
BstDSI CCRYGG 1 cut(s) 101
BstFNI CGCG 1 cut(s) 103
BstKTI GATC 7 cut(s) 190, 534, 610, 678, 869, 1288, 1366
BstMAI GTCTC 5 cut(s) 80, 441, 729, 774, 1160
BstMBI GATC 7 cut(s) 187, 531, 607, 675, 866, 1285, 1363
BstMWI GCNNNNNNNGC 5 cut(s) 47, 146, 176, 301, 379
BstNI CCWGG 4 cut(s) 323, 660, 792, 933
BstSCI CCNGG 5 cut(s) 275, 321, 658, 790, 931
BstSLI GKGCMC 1 cut(s) 319
BstUI CGCG 1 cut(s) 103
BstV1I GCAGC 2 cut(s) 79, 163
BstX2I RGATCY 1 cut(s) 531
BstXI CCANNNNNNTGG 1 cut(s) 390
BstYI RGATCY 1 cut(s) 531
BsuRI GGCC 4 cut(s) 164, 790, 1471, 1556
BtgI CCRYGG 1 cut(s) 101
BtgZI GCGATG 1 cut(s) 1374
BtsIMutI CAGTG 3 cut(s) 255, 1043, 1667
BveI ACCTGC 1 cut(s) 916
Cac8I GCNNGC 2 cut(s) 293, 1438
CaiI CAGNNNCTG 1 cut(s) 257
Cfr13I GGNCC 2 cut(s) 244, 928
Cfr42I CCGCGG 1 cut(s) 104
CseI GACGC 1 cut(s) 1352
CspCI CAANNNNNGTGG 2 cut(s) 1060, 1095
CviAII CATG 6 cut(s) 358, 457, 565, 673, 870, 1634
DdeI CTNAG 8 cut(s) 77, 132, 771, 807, 825, 879, 1466, 1622
DpnI GATC 7 cut(s) 189, 533, 609, 677, 868, 1287, 1365
DpnII GATC 7 cut(s) 187, 531, 607, 675, 866, 1285, 1363
DriI GACNNNNNGTC 1 cut(s) 197
Eam1104I CTCTTC 4 cut(s) 102, 150, 225, 735
Eam1105I GACNNNNNGTC 1 cut(s) 197
EarI CTCTTC 4 cut(s) 102, 150, 225, 735
Eco130I CCWWGG 2 cut(s) 60, 708
Eco147I AGGCCT 2 cut(s) 790, 1471
Eco31I GGTCTC 2 cut(s) 729, 1160
Eco47I GGWCC 2 cut(s) 244, 928
Eco57I CTGAAG 2 cut(s) 171, 756
EcoO109I RGGNCCY 1 cut(s) 928
EcoRII CCWGG 4 cut(s) 321, 658, 790, 931
EcoT14I CCWWGG 2 cut(s) 60, 708
EcoT22I ATGCAT 1 cut(s) 897
ErhI CCWWGG 2 cut(s) 60, 708
FaeI CATG 6 cut(s) 361, 460, 568, 676, 873, 1637
FaqI GGGAC 4 cut(s) 185, 257, 914, 1229
FatI CATG 6 cut(s) 357, 456, 564, 672, 869, 1633
FbaI TGATCA 2 cut(s) 607, 1363
Fnu4HI GCNGC 5 cut(s) 6, 93, 104, 177, 842
Fsp4HI GCNGC 5 cut(s) 6, 93, 104, 177, 842
FspBI CTAG 4 cut(s) 921, 1292, 1538, 1647
GluI GCNGC 5 cut(s) 6, 93, 104, 177, 842
GsaI CCCAGC 2 cut(s) 723, 1406
GsuI CTGGAG 2 cut(s) 305, 307
HaeIII GGCC 4 cut(s) 164, 790, 1471, 1556
HapII CCGG 2 cut(s) 276, 1595
HgaI GACGC 1 cut(s) 1352
Hin1II CATG 6 cut(s) 361, 460, 568, 676, 873, 1637
HincII GTYRAC 1 cut(s) 831
HindII GTYRAC 1 cut(s) 831
HinfI GANTC 9 cut(s) 85, 124, 134, 490, 595, 805, 1055, 1064, 1298
HpaII CCGG 2 cut(s) 276, 1595
HphI GGTGA 5 cut(s) 49, 641, 709, 1094, 1291
Hpy166II GTNNAC 4 cut(s) 317, 831, 1342, 1641
Hpy188I TCNGA 9 cut(s) 520, 607, 612, 640, 774, 1063, 1411, 1623, 1678
Hpy188III TCNNGA 4 cut(s) 79, 478, 535, 1308
Hpy8I GTNNAC 4 cut(s) 317, 831, 1342, 1641
Hpy99I CGWCG 2 cut(s) 195, 1566
HpyAV CCTTC 6 cut(s) 154, 402, 868, 1220, 1270, 1371
HpyCH4III ACNGT 4 cut(s) 209, 862, 1243, 1518
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 146, 176, 301, 379
HpyF3I CTNAG 8 cut(s) 77, 132, 771, 807, 825, 879, 1466, 1622
Hsp92II CATG 6 cut(s) 361, 460, 568, 676, 873, 1637
Ksp22I TGATCA 2 cut(s) 607, 1363
KspI CCGCGG 1 cut(s) 104
Kzo9I GATC 7 cut(s) 187, 531, 607, 675, 866, 1285, 1363
LguI GCTCTTC 1 cut(s) 102
LmnI GCTCC 2 cut(s) 288, 517
Lsp1109I GCAGC 2 cut(s) 79, 163
LweI GCATC 3 cut(s) 1108, 1400, 1423
MaeI CTAG 4 cut(s) 921, 1292, 1538, 1647
MaeIII GTNAC 4 cut(s) 55, 209, 663, 802
MalI GATC 7 cut(s) 189, 533, 609, 677, 868, 1287, 1365
MboI GATC 7 cut(s) 187, 531, 607, 675, 866, 1285, 1363
MboII GAAGA 9 cut(s) 89, 164, 167, 212, 356, 749, 752, 1341, 1386
MfeI CAATTG 2 cut(s) 9, 1150
MflI RGATCY 1 cut(s) 531
MhlI GDGCHC 1 cut(s) 319
MluCI AATT 9 cut(s) 9, 330, 351, 423, 462, 550, 1089, 1128, 1150
MlyI GAGTC 2 cut(s) 143, 799
MmeI TCCRAC 1 cut(s) 844
Mph1103I ATGCAT 1 cut(s) 897
MroXI GAANNNNTTC 1 cut(s) 744
MseI TTAA 2 cut(s) 422, 1551
MslI CAYNNNNRTG 3 cut(s) 260, 800, 1431
MspA1I CMGCKG 1 cut(s) 103
MspI CCGG 2 cut(s) 276, 1595
MspR9I CCNGG 5 cut(s) 277, 323, 660, 792, 933
MunI CAATTG 2 cut(s) 9, 1150
Mva1269I GAATGC 1 cut(s) 709
MvaI CCWGG 4 cut(s) 323, 660, 792, 933
MvnI CGCG 1 cut(s) 103
MwoI GCNNNNNNNGC 5 cut(s) 47, 146, 176, 301, 379
NciI CCSGG 1 cut(s) 277
NdeII GATC 7 cut(s) 187, 531, 607, 675, 866, 1285, 1363
NlaIII CATG 6 cut(s) 361, 460, 568, 676, 873, 1637
NlaIV GGNNCC 5 cut(s) 245, 654, 930, 1630, 1667
NmeAIII GCCGAG 1 cut(s) 145
NmuCI GTSAC 4 cut(s) 55, 209, 663, 802
NsiI ATGCAT 1 cut(s) 897
PasI CCCWGGG 1 cut(s) 932
PceI AGGCCT 2 cut(s) 790, 1471
PciSI GCTCTTC 1 cut(s) 102
PctI GAATGC 1 cut(s) 709
PdmI GAANNNNTTC 1 cut(s) 744
PfeI GAWTC 7 cut(s) 85, 124, 490, 595, 1055, 1064, 1298
PfoI TCCNGGA 1 cut(s) 321
PkrI GCNGC 5 cut(s) 7, 94, 105, 178, 843
PleI GAGTC 2 cut(s) 142, 799
PpsI GAGTC 2 cut(s) 142, 799
PpuMI RGGWCCY 1 cut(s) 928
Psp5II RGGWCCY 1 cut(s) 928
Psp6I CCWGG 4 cut(s) 321, 658, 790, 931
PspFI CCCAGC 2 cut(s) 719, 1402
PspGI CCWGG 4 cut(s) 321, 658, 790, 931
PspN4I GGNNCC 5 cut(s) 245, 654, 930, 1630, 1667
PspPI GGNCC 2 cut(s) 244, 928
PspPPI RGGWCCY 1 cut(s) 928
PstNI CAGNNNCTG 1 cut(s) 257
PsuI RGATCY 1 cut(s) 531
RseI CAYNNNNRTG 3 cut(s) 260, 800, 1431
SacII CCGCGG 1 cut(s) 104
SapI GCTCTTC 1 cut(s) 102
SaqAI TTAA 2 cut(s) 422, 1551
SatI GCNGC 5 cut(s) 6, 93, 104, 177, 842
Sau3AI GATC 7 cut(s) 187, 531, 607, 675, 866, 1285, 1363
Sau96I GGNCC 2 cut(s) 244, 928
SchI GAGTC 2 cut(s) 143, 799
ScrFI CCNGG 5 cut(s) 277, 323, 660, 792, 933
SduI GDGCHC 1 cut(s) 319
SfaNI GCATC 3 cut(s) 1108, 1400, 1423
Sfr303I CCGCGG 1 cut(s) 104
SgrBI CCGCGG 1 cut(s) 104
SinI GGWCC 2 cut(s) 244, 928
SmiMI CAYNNNNRTG 3 cut(s) 260, 800, 1431
SmlI CTYRAG 2 cut(s) 20, 726
SmoI CTYRAG 2 cut(s) 20, 726
Sse9I AATT 9 cut(s) 9, 330, 351, 423, 462, 550, 1089, 1128, 1150
SseBI AGGCCT 2 cut(s) 790, 1471
SsiI CCGC 5 cut(s) 101, 103, 436, 841, 1499
SspMI CTAG 4 cut(s) 921, 1292, 1538, 1647
StuI AGGCCT 2 cut(s) 790, 1471
StyD4I CCNGG 5 cut(s) 275, 321, 658, 790, 931
StyI CCWWGG 2 cut(s) 60, 708
TaaI ACNGT 4 cut(s) 209, 862, 1243, 1518
TaqI TCGA 4 cut(s) 190, 477, 582, 1067
TasI AATT 9 cut(s) 9, 330, 351, 423, 462, 550, 1089, 1128, 1150
TauI GCSGC 2 cut(s) 106, 844
TfiI GAWTC 7 cut(s) 85, 124, 490, 595, 1055, 1064, 1298
Tru1I TTAA 2 cut(s) 422, 1551
Tru9I TTAA 2 cut(s) 422, 1551
TscAI CASTG 3 cut(s) 262, 1050, 1667
TseFI GTSAC 4 cut(s) 55, 209, 663, 802
TseI GCWGC 3 cut(s) 5, 92, 176
Tsp45I GTSAC 4 cut(s) 55, 209, 663, 802
TspDTI ATGAA 7 cut(s) 132, 487, 716, 987, 993, 1047, 1239
TspGWI ACGGA 1 cut(s) 1550
TspRI CASTG 3 cut(s) 262, 1050, 1667
VneI GTGCAC 1 cut(s) 315
VpaK11BI GGWCC 2 cut(s) 244, 928
XapI RAATTY 2 cut(s) 550, 1128
XcmI CCANNNNNNNNNTGG 1 cut(s) 1594
XmnI GAANNNNTTC 1 cut(s) 744
XspI CTAG 4 cut(s) 921, 1292, 1538, 1647
Zsp2I ATGCAT 1 cut(s) 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.