Rmu_sc0001432.1_g000004

Protein of unknown function (DUF295)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001432.1
Physical Location & Seq
Reverse (-)
10410 .. 11366
957 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001432.1_g000004.1.cds

Sequence Viewer

Length: 639 bp
atgttttcgaagaatgtgggagactacctcgctctaaccatatctggtttcctcaagagccttcaaacttattgttatcagagactagacaacaagaaaaagcaaaatgacttgggtcattggcaggaaccacctgaagatatcaaagagatgattgttcagcacatgtgtttcagtggtcgagttcgtttaagcagtttgtgcaagtcttggaggttggtttctatgcgaagagatatccgtgctcctagacaactcccatgcatggttatcgaggctggccaggctagttccgagatgtttccatctgcaatggtttatttgttcttccaaaggttggttgattttgtggaagtgggactatgtcgggctaaaaccccagacatctcagaatgtatggtggcagcagttcataatagtggcgaactggctttgtgtagacctagagacaaaagctggagtgtctaccaagtatttgaagaaaatgaaaatcttgtcgagagagtcaacagaatattgttttccagcactggcgtgctatatgccttggttacaggtaaccgcaatggtcgtggtgttgatgcagaccgcactttaaagtttggagatgaggcagttgttagaactacactagtctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

212

Amino Acids

24.18

Weight (kDa)

8.68

Isoelectric Point (pI)

31.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 337
AccI GTMKAC 2 cut(s) 439, 465
AciI CCGC 2 cut(s) 562, 589
AcoI YGGCCR 1 cut(s) 280
AcuI CTGAAG 1 cut(s) 156
AfiI CCNNNNNNNGG 2 cut(s) 265, 337
AflIII ACRYGT 1 cut(s) 165
AgsI TTSAA 2 cut(s) 65, 479
AhlI ACTAGT 1 cut(s) 631
AjnI CCWGG 1 cut(s) 282
AleI CACNNNNGTG 1 cut(s) 533
AluBI AGCT 1 cut(s) 456
AluI AGCT 1 cut(s) 456
Alw21I GWGCWC 1 cut(s) 247
Alw26I GTCTC 3 cut(s) 15, 76, 441
AoxI GGCC 1 cut(s) 280
ApeKI GCWGC 1 cut(s) 404
AsuII TTCGAA 1 cut(s) 8
BalI TGGCCA 1 cut(s) 282
Bbv12I GWGCWC 1 cut(s) 247
BbvI GCAGC 1 cut(s) 416
BccI CCATC 1 cut(s) 313
BcgI CGANNNNNNTGC 2 cut(s) 253, 287
BciT130I CCWGG 1 cut(s) 284
BcoDI GTCTC 3 cut(s) 15, 76, 441
BcuI ACTAGT 1 cut(s) 631
BfaI CTAG 5 cut(s) 86, 249, 288, 444, 632
BisI GCNGC 1 cut(s) 405
BlsI GCNGC 1 cut(s) 406
Bme1390I CCNGG 1 cut(s) 284
BmiI GGNNCC 1 cut(s) 129
BmrFI CCNGG 1 cut(s) 284
BmsI GCATC 1 cut(s) 571
BoxI GACNNNNGTC 1 cut(s) 114
BplI GAGNNNNNCTC 2 cut(s) 12, 44
BpmI CTGGAG 1 cut(s) 478
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 1 cut(s) 38
BsaJI CCNNGG 1 cut(s) 546
Bsc4I CCNNNNNNNGG 2 cut(s) 265, 337
Bse1I ACTGG 2 cut(s) 432, 535
Bse3DI GCAATG 2 cut(s) 318, 571
BseBI CCWGG 1 cut(s) 284
BseDI CCNNGG 1 cut(s) 546
BseLI CCNNNNNNNGG 2 cut(s) 265, 337
BseMI GCAATG 2 cut(s) 318, 571
BseMII CTCAG 1 cut(s) 402
BseNI ACTGG 2 cut(s) 432, 535
BseXI GCAGC 1 cut(s) 416
BshFI GGCC 1 cut(s) 282
BsiHKAI GWGCWC 1 cut(s) 247
BslFI GGGAC 1 cut(s) 372
BslI CCNNNNNNNGG 2 cut(s) 265, 337
BsmAI GTCTC 3 cut(s) 15, 76, 441
BsmFI GGGAC 1 cut(s) 372
BsnI GGCC 1 cut(s) 282
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 1 cut(s) 247
BspACI CCGC 2 cut(s) 562, 589
BspANI GGCC 1 cut(s) 282
BspCNI CTCAG 1 cut(s) 401
BspLI GGNNCC 1 cut(s) 129
BspT104I TTCGAA 1 cut(s) 8
BsrDI GCAATG 2 cut(s) 318, 571
BsrI ACTGG 2 cut(s) 432, 535
BssECI CCNNGG 1 cut(s) 546
BssT1I CCWWGG 1 cut(s) 546
Bst2UI CCWGG 1 cut(s) 284
Bst6I CTCTTC 1 cut(s) 226
BstAPI GCANNNNNTGC 1 cut(s) 201
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 2 cut(s) 280, 536
BstDEI CTNAG 1 cut(s) 388
BstEII GGTNACC 1 cut(s) 557
BstMAI GTCTC 3 cut(s) 15, 76, 441
BstMWI GCNNNNNNNGC 2 cut(s) 201, 284
BstNI CCWGG 1 cut(s) 284
BstNSI RCATGY 1 cut(s) 169
BstPAI GACNNNNGTC 1 cut(s) 114
BstPI GGTNACC 1 cut(s) 557
BstSCI CCNGG 1 cut(s) 282
BstV1I GCAGC 1 cut(s) 416
BsuRI GGCC 1 cut(s) 282
BtsIMutI CAGTG 2 cut(s) 181, 528
Cac8I GCNNGC 2 cut(s) 280, 536
CspCI CAANNNNNGTGG 2 cut(s) 553, 588
CviAII CATG 3 cut(s) 166, 261, 265
CviJI RGCY 7 cut(s) 60, 278, 282, 287, 371, 431, 456
CviKI_1 RGCY 7 cut(s) 60, 278, 282, 287, 371, 431, 456
DdeI CTNAG 1 cut(s) 388
DraI TTTAAA 1 cut(s) 597
EaeI YGGCCR 1 cut(s) 280
Eam1104I CTCTTC 1 cut(s) 226
EarI CTCTTC 1 cut(s) 226
Eco130I CCWWGG 1 cut(s) 546
Eco32I GATATC 2 cut(s) 142, 238
Eco57I CTGAAG 1 cut(s) 156
Eco91I GGTNACC 1 cut(s) 557
EcoO65I GGTNACC 1 cut(s) 557
EcoRII CCWGG 1 cut(s) 282
EcoRV GATATC 2 cut(s) 142, 238
EcoT14I CCWWGG 1 cut(s) 546
EcoT22I ATGCAT 1 cut(s) 266
ErhI CCWWGG 1 cut(s) 546
FaeI CATG 3 cut(s) 169, 264, 268
FaqI GGGAC 1 cut(s) 372
FatI CATG 3 cut(s) 165, 260, 264
FblI GTMKAC 2 cut(s) 439, 465
Fnu4HI GCNGC 1 cut(s) 405
Fsp4HI GCNGC 1 cut(s) 405
FspBI CTAG 5 cut(s) 86, 249, 288, 444, 632
GluI GCNGC 1 cut(s) 405
GsuI CTGGAG 1 cut(s) 478
HaeIII GGCC 1 cut(s) 282
Hin1II CATG 3 cut(s) 169, 264, 268
HincII GTYRAC 1 cut(s) 508
HindII GTYRAC 1 cut(s) 508
HinfI GANTC 1 cut(s) 504
Hpy166II GTNNAC 3 cut(s) 440, 466, 508
Hpy188I TCNGA 3 cut(s) 81, 295, 391
Hpy188III TCNNGA 2 cut(s) 55, 499
Hpy8I GTNNAC 3 cut(s) 440, 466, 508
HpyAV CCTTC 1 cut(s) 71
HpyCH4V TGCA 4 cut(s) 204, 264, 311, 584
HpyF10VI GCNNNNNNNGC 2 cut(s) 201, 284
HpyF3I CTNAG 1 cut(s) 388
Hsp92II CATG 3 cut(s) 169, 264, 268
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 1 cut(s) 416
LweI GCATC 1 cut(s) 571
MaeI CTAG 5 cut(s) 86, 249, 288, 444, 632
MaeIII GTNAC 2 cut(s) 550, 557
MboII GAAGA 5 cut(s) 22, 149, 243, 319, 491
MhlI GDGCHC 1 cut(s) 247
MlsI TGGCCA 1 cut(s) 282
MluNI TGGCCA 1 cut(s) 282
MlyI GAGTC 1 cut(s) 513
MnlI CCTC 5 cut(s) 38, 62, 207, 268, 604
Mox20I TGGCCA 1 cut(s) 282
Mph1103I ATGCAT 1 cut(s) 266
MscI TGGCCA 1 cut(s) 282
MseI TTAA 2 cut(s) 191, 596
MslI CAYNNNNRTG 2 cut(s) 417, 533
Msp20I TGGCCA 1 cut(s) 282
MspR9I CCNGG 1 cut(s) 284
MvaI CCWGG 1 cut(s) 284
MwoI GCNNNNNNNGC 2 cut(s) 201, 284
NlaIII CATG 3 cut(s) 169, 264, 268
NlaIV GGNNCC 1 cut(s) 129
NsiI ATGCAT 1 cut(s) 266
NspI RCATGY 1 cut(s) 169
NspV TTCGAA 1 cut(s) 8
OliI CACNNNNGTG 1 cut(s) 533
PciI ACATGT 1 cut(s) 165
PflFI GACNNNGTC 1 cut(s) 363
PflMI CCANNNNNTGG 1 cut(s) 337
PkrI GCNGC 1 cut(s) 406
PleI GAGTC 1 cut(s) 512
PpsI GAGTC 1 cut(s) 512
PscI ACATGT 1 cut(s) 165
PshAI GACNNNNGTC 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 282
PspEI GGTNACC 1 cut(s) 557
PspGI CCWGG 1 cut(s) 282
PspN4I GGNNCC 1 cut(s) 129
PsyI GACNNNGTC 1 cut(s) 363
RseI CAYNNNNRTG 2 cut(s) 417, 533
SaqAI TTAA 2 cut(s) 191, 596
SatI GCNGC 1 cut(s) 405
SchI GAGTC 1 cut(s) 513
ScrFI CCNGG 1 cut(s) 284
SduI GDGCHC 1 cut(s) 247
SetI ASST 7 cut(s) 30, 136, 218, 338, 445, 458, 559
SfaNI GCATC 1 cut(s) 571
SfuI TTCGAA 1 cut(s) 8
SmiMI CAYNNNNRTG 2 cut(s) 417, 533
SmlI CTYRAG 1 cut(s) 53
SmoI CTYRAG 1 cut(s) 53
SpeI ACTAGT 1 cut(s) 631
SsiI CCGC 2 cut(s) 562, 589
SspI AATATT 1 cut(s) 516
SspMI CTAG 5 cut(s) 86, 249, 288, 444, 632
StyD4I CCNGG 1 cut(s) 282
StyI CCWWGG 1 cut(s) 546
TaqI TCGA 4 cut(s) 8, 181, 273, 498
Tru1I TTAA 2 cut(s) 191, 596
Tru9I TTAA 2 cut(s) 191, 596
TscAI CASTG 2 cut(s) 181, 535
TseI GCWGC 1 cut(s) 404
TspDTI ATGAA 2 cut(s) 401, 501
TspGWI ACGGA 1 cut(s) 230
TspRI CASTG 2 cut(s) 181, 535
Tth111I GACNNNGTC 1 cut(s) 363
Van91I CCANNNNNTGG 1 cut(s) 337
XceI RCATGY 1 cut(s) 169
XmiI GTMKAC 2 cut(s) 439, 465
XspI CTAG 5 cut(s) 86, 249, 288, 444, 632
Zsp2I ATGCAT 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.