RchiOBHm_Chr4g0388171

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000144
Physical Location & Seq
Reverse (-)
3328548 .. 3330044
1497 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36142

Sequence Viewer

Length: 1497 bp
ATGTTTTCTTTAATCTCTTCGTTAGTTAGTTACTTTAGCCAGAAAATTGAGACACTGGTCGTTTGCGGCTGCTTATTGTTTGGTTGTGTGACGATTCGAAGAATATTCCGTCGCAAACCTACTTGGCAGACACTACCTGCCGATATCTTGGAGATGATTGTACAACGCCTCACAATAGGTGATCGTATACGCGTAAGCAACGTTTCCAAGACTTGGAGGTCCGTTGCTATGCGCAGAGATATCCCTAGTGCTCCACATCAACTCCCCTGGTTAGTAATCCCTCAATCTTCCAACCACTACTTAAGCTTTTTCGACCTATCCGATGGCAAAGTTGGCAAGGTGGAGCTGCCTGAATCAGTACGAGGAGGGTGGTTTCTAGGATCTTGTAAAGGTTGGTTTGTCATTGTCAAGGAAGAAGACCTAAACTCTATGATGTTTCTTGTAAACCCAATTTCAGGAGCCCAACACCAACTCCCACCCTTGAGCACAATTCCATCTTTCAAAAAGTATATAGAAACAACCGAATGGAAATGCGCTGGTGGCTTGGCTTTCTGCAATGGCATTGCTTTATCTACCTCCGATGTTACCTCATGTACGGTAGCTGCATCTTTCGATGGTGATGATAAAACATTGTGCTTTTGCAGACCTGGAGACGATGCGTGGAGTATTTTTGAGGTACTAGATACAAATGACGCCTTTACTGATTTATTGTTTTCTTCTGGCGTGCTATACGCGTTGGTTTTGAGTGATAATAAGAATGGCATCGCTGCATCTCCTCGCACCTTAAGTTTTAGAGATCGTGCAGTGGAACTGAAGTTGGTTTATGACACAGTAGCAAACTATACGGTTGGCTTTGAAGAATATGTTGACTATCAGATTGATTTAAGCGATAGCTTCAAGTCACATTTGTTAGAGTCATCAACCAACAATGAAGTCTTTGTCATCCACGAAATCACAGATGTATTTTTAAAGAAGGATGACGCCCACGACAACCATGAGGATGGACCTGATGAGGAGGTGCTGGATGATAATAATGACAATGGCAATGAGGAGGACAACCAGGATGCACCTGATGAGGAGGAGGATGATAATAATGACGATGGCAATGAGGAAGACAACAACTTGGAAGGTAATTTTCAAATCCATGGTGCCGATGAAGAGTATAGTGACCTTTTTCCATACCTGAGAACAAGTGGTTTTGAAGTATACAAGCTTGATCCAGCGAATGACAGGATTGTTCCTGTAGAATGTTTGAAGGACCAACTTCTGTTTTTGTCGAACACTGGTTCCTTGTCCCTTCCAGCAAGGGATATCAAAGGGTTACTAGGGAATAGCATTTACTTTGCAACAAATAGGATCATGAGTTTTCATTCAAAAACATATATATGTCGGGAGATGGGTGAGTTCTACTTCAACAAAGGAAGAATTAAGCGATCATTTCCAAGTGTTGAGATGTCACTACGATCTCAAGTAAGTTGGTTCTCTCCAAGTTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

498

Amino Acids

56.16

Weight (kDa)

4.6

Isoelectric Point (pI)

39.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 42 - 78 2.6e-07 F-box domain
F-box-like PF12937 42 - 78 9.3e-06 F-box-like
Beta-prop_KIB1-4 PF03478 103 - 451 3.8e-34 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 217
Acc16I TGCGCA 1 cut(s) 233
Acc36I ACCTGC 1 cut(s) 145
AccB1I GGYRCC 1 cut(s) 1148
AccB7I CCANNNNNTGG 1 cut(s) 213
AccI GTMKAC 2 cut(s) 187, 1206
AccII CGCG 2 cut(s) 192, 734
AciI CCGC 1 cut(s) 66
AclI AACGTT 1 cut(s) 201
AclWI GGATC 3 cut(s) 388, 1211, 1364
AcuI CTGAAG 1 cut(s) 833
AcyI GRCGYC 2 cut(s) 693, 981
AfaI GTAC 4 cut(s) 162, 360, 595, 678
AfiI CCNNNNNNNGG 2 cut(s) 213, 455
AflII CTTAAG 2 cut(s) 301, 784
AflIII ACRYGT 2 cut(s) 190, 732
AgsI TTSAA 8 cut(s) 502, 857, 898, 1139, 1202, 1255, 1374, 1414
AjnI CCWGG 3 cut(s) 266, 646, 1059
AloI GAACNNNNNNTCC 2 cut(s) 1271, 1303
AluBI AGCT 5 cut(s) 306, 346, 602, 894, 1213
AluI AGCT 5 cut(s) 306, 346, 602, 894, 1213
Alw21I GWGCWC 2 cut(s) 253, 488
Alw26I GTCTC 2 cut(s) 44, 645
AlwI GGATC 3 cut(s) 388, 1211, 1364
ApeKI GCWGC 4 cut(s) 69, 346, 602, 767
AspLEI GCGC 2 cut(s) 234, 536
AspS9I GGNCC 3 cut(s) 219, 1004, 1258
AsuHPI GGTGA 3 cut(s) 191, 629, 1412
AsuII TTCGAA 1 cut(s) 97
AvaII GGWCC 3 cut(s) 219, 1004, 1258
BanI GGYRCC 1 cut(s) 1148
BanII GRGCYC 1 cut(s) 463
BbsI GAAGAC 2 cut(s) 423, 1119
Bbv12I GWGCWC 2 cut(s) 253, 488
BbvI GCAGC 4 cut(s) 56, 333, 589, 754
BccI CCATC 6 cut(s) 317, 502, 608, 995, 1094, 1390
BciT130I CCWGG 3 cut(s) 268, 648, 1061
BcoDI GTCTC 2 cut(s) 44, 645
BfaI CTAG 4 cut(s) 246, 377, 680, 1325
BfmI CTRYAG 1 cut(s) 1242
BfrI CTTAAG 2 cut(s) 301, 784
BfuAI ACCTGC 1 cut(s) 145
BisI GCNGC 5 cut(s) 67, 70, 347, 603, 768
BlsI GCNGC 5 cut(s) 68, 71, 348, 604, 769
Bme1390I CCNGG 3 cut(s) 268, 648, 1061
Bme18I GGWCC 3 cut(s) 219, 1004, 1258
BmgT120I GGNCC 3 cut(s) 219, 1004, 1258
BmiI GGNNCC 3 cut(s) 460, 1150, 1288
BmrFI CCNGG 3 cut(s) 268, 648, 1061
BmsI GCATC 5 cut(s) 614, 646, 771, 779, 1054
BoxI GACNNNNGTC 1 cut(s) 56
BpiI GAAGAC 2 cut(s) 423, 1119
BpmI CTGGAG 1 cut(s) 669
Bpu14I TTCGAA 1 cut(s) 97
BpuEI CTTGAG 2 cut(s) 502, 1452
BsaHI GRCGYC 2 cut(s) 693, 981
BsaJI CCNNGG 2 cut(s) 266, 1144
BsaXI ACNNNNNCTCC 4 cut(s) 246, 276, 456, 486
Bsc4I CCNNNNNNNGG 2 cut(s) 213, 455
Bse1I ACTGG 2 cut(s) 60, 1288
Bse3DI GCAATG 4 cut(s) 561, 562, 1051, 1111
BseBI CCWGG 3 cut(s) 268, 648, 1061
BseDI CCNNGG 2 cut(s) 266, 1144
BseGI GGATG 6 cut(s) 942, 982, 1006, 1030, 1069, 1090
BseLI CCNNNNNNNGG 2 cut(s) 213, 455
BseMI GCAATG 4 cut(s) 561, 562, 1051, 1111
BseMII CTCAG 1 cut(s) 1175
BseNI ACTGG 2 cut(s) 60, 1288
BseRI GAGGAG 6 cut(s) 378, 765, 1028, 1064, 1091, 1094
BseXI GCAGC 4 cut(s) 56, 333, 589, 754
BsgI GTGCAG 1 cut(s) 822
Bsh1236I CGCG 2 cut(s) 192, 734
BshNI GGYRCC 1 cut(s) 1148
BsiHKAI GWGCWC 2 cut(s) 253, 488
BslFI GGGAC 1 cut(s) 1279
BslI CCNNNNNNNGG 2 cut(s) 213, 455
BsmAI GTCTC 2 cut(s) 44, 645
BsmBI CGTCTC 1 cut(s) 645
BsmFI GGGAC 1 cut(s) 1279
Bsp119I TTCGAA 1 cut(s) 97
Bsp1286I GDGCHC 3 cut(s) 253, 463, 488
Bsp1407I TGTACA 1 cut(s) 160
Bsp143I GATC 7 cut(s) 181, 380, 796, 1216, 1356, 1433, 1463
Bsp19I CCATGG 1 cut(s) 1144
BspACI CCGC 1 cut(s) 66
BspCNI CTCAG 1 cut(s) 1176
BspFNI CGCG 2 cut(s) 192, 734
BspHI TCATGA 1 cut(s) 1359
BspLI GGNNCC 3 cut(s) 460, 1150, 1288
BspMI ACCTGC 1 cut(s) 145
BspPI GGATC 3 cut(s) 388, 1211, 1364
BspT104I TTCGAA 1 cut(s) 97
BspT107I GGYRCC 1 cut(s) 1148
BspTI CTTAAG 2 cut(s) 301, 784
BsrDI GCAATG 4 cut(s) 561, 562, 1051, 1111
BsrGI TGTACA 1 cut(s) 160
BsrI ACTGG 2 cut(s) 60, 1288
BssECI CCNNGG 2 cut(s) 266, 1144
BssMI GATC 7 cut(s) 181, 380, 796, 1216, 1356, 1433, 1463
BssNAI GTATAC 2 cut(s) 188, 1207
BssNI GRCGYC 2 cut(s) 693, 981
BssT1I CCWWGG 1 cut(s) 1144
Bst1107I GTATAC 2 cut(s) 188, 1207
Bst2UI CCWGG 3 cut(s) 268, 648, 1061
Bst4CI ACNGT 3 cut(s) 598, 832, 847
Bst6I CTCTTC 2 cut(s) 22, 1152
BstACI GRCGYC 2 cut(s) 693, 981
BstAFI CTTAAG 2 cut(s) 301, 784
BstAUI TGTACA 1 cut(s) 160
BstBI TTCGAA 1 cut(s) 97
BstC8I GCNNGC 1 cut(s) 725
BstDEI CTNAG 1 cut(s) 1184
BstDSI CCRYGG 1 cut(s) 1144
BstF5I GGATG 6 cut(s) 942, 982, 1006, 1030, 1069, 1090
BstFNI CGCG 2 cut(s) 192, 734
BstHHI GCGC 2 cut(s) 234, 536
BstKTI GATC 7 cut(s) 184, 383, 799, 1219, 1359, 1436, 1466
BstMAI GTCTC 2 cut(s) 44, 645
BstMBI GATC 7 cut(s) 181, 380, 796, 1216, 1356, 1433, 1463
BstMWI GCNNNNNNNGC 2 cut(s) 333, 540
BstNI CCWGG 3 cut(s) 268, 648, 1061
BstPAI GACNNNNGTC 1 cut(s) 56
BstSCI CCNGG 3 cut(s) 266, 646, 1059
BstSFI CTRYAG 1 cut(s) 1242
BstUI CGCG 2 cut(s) 192, 734
BstV1I GCAGC 4 cut(s) 56, 333, 589, 754
BstV2I GAAGAC 2 cut(s) 423, 1119
BstX2I RGATCY 1 cut(s) 380
BstXI CCANNNNNNTGG 1 cut(s) 1001
BstYI RGATCY 1 cut(s) 380
BstZ17I GTATAC 2 cut(s) 188, 1207
BtgI CCRYGG 1 cut(s) 1144
BtgZI GCGATG 1 cut(s) 748
BtsCI GGATG 6 cut(s) 942, 982, 1006, 1030, 1069, 1090
BtsI GCAGTG 1 cut(s) 810
BtsIMutI CAGTG 3 cut(s) 53, 810, 1281
BveI ACCTGC 1 cut(s) 145
Cac8I GCNNGC 1 cut(s) 725
CciI TCATGA 1 cut(s) 1359
CfoI GCGC 2 cut(s) 234, 536
Cfr13I GGNCC 3 cut(s) 219, 1004, 1258
CseI GACGC 2 cut(s) 701, 989
Csp6I GTAC 4 cut(s) 161, 359, 594, 677
CviAII CATG 4 cut(s) 591, 995, 1145, 1360
CviQI GTAC 4 cut(s) 161, 359, 594, 677
DdeI CTNAG 1 cut(s) 1184
DpnI GATC 7 cut(s) 183, 382, 798, 1218, 1358, 1435, 1465
DpnII GATC 7 cut(s) 181, 380, 796, 1216, 1356, 1433, 1463
DraI TTTAAA 1 cut(s) 969
DrdI GACNNNNNNGTC 1 cut(s) 217
DseDI GACNNNNNNGTC 1 cut(s) 217
Eam1104I CTCTTC 2 cut(s) 22, 1152
EarI CTCTTC 2 cut(s) 22, 1152
Eco130I CCWWGG 1 cut(s) 1144
Eco24I GRGCYC 1 cut(s) 463
Eco32I GATATC 3 cut(s) 145, 241, 1312
Eco47I GGWCC 3 cut(s) 219, 1004, 1258
Eco57I CTGAAG 1 cut(s) 833
EcoRII CCWGG 3 cut(s) 266, 646, 1059
EcoRV GATATC 3 cut(s) 145, 241, 1312
EcoT14I CCWWGG 1 cut(s) 1144
EcoT38I GRGCYC 1 cut(s) 463
ErhI CCWWGG 1 cut(s) 1144
Esp3I CGTCTC 1 cut(s) 645
FaeI CATG 4 cut(s) 594, 998, 1148, 1363
FaqI GGGAC 1 cut(s) 1279
FatI CATG 4 cut(s) 590, 994, 1144, 1359
FblI GTMKAC 2 cut(s) 187, 1206
Fnu4HI GCNGC 5 cut(s) 67, 70, 347, 603, 768
FokI GGATG 6 cut(s) 929, 989, 1013, 1037, 1076, 1097
FriOI GRGCYC 1 cut(s) 463
Fsp4HI GCNGC 5 cut(s) 67, 70, 347, 603, 768
FspBI CTAG 4 cut(s) 246, 377, 680, 1325
FspI TGCGCA 1 cut(s) 233
GlaI GCGC 2 cut(s) 233, 535
GluI GCNGC 5 cut(s) 67, 70, 347, 603, 768
GsuI CTGGAG 1 cut(s) 669
HgaI GACGC 2 cut(s) 701, 989
HhaI GCGC 2 cut(s) 234, 536
Hin1I GRCGYC 2 cut(s) 693, 981
Hin1II CATG 4 cut(s) 594, 998, 1148, 1363
Hin6I GCGC 2 cut(s) 232, 534
HinP1I GCGC 2 cut(s) 232, 534
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HindIII AAGCTT 2 cut(s) 304, 1211
HinfI GANTC 3 cut(s) 94, 353, 914
HphI GGTGA 3 cut(s) 191, 629, 1412
Hpy166II GTNNAC 4 cut(s) 188, 445, 868, 1207
Hpy188I TCNGA 3 cut(s) 322, 580, 876
Hpy188III TCNNGA 3 cut(s) 456, 1360, 1391
Hpy8I GTNNAC 4 cut(s) 188, 445, 868, 1207
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 4 cut(s) 967, 1121, 1249, 1307
HpyCH4III ACNGT 3 cut(s) 598, 832, 847
HpyCH4IV ACGT 1 cut(s) 201
HpyCH4V TGCA 7 cut(s) 555, 605, 642, 770, 803, 1067, 1346
HpyF10VI GCNNNNNNNGC 2 cut(s) 333, 540
HpyF3I CTNAG 1 cut(s) 1184
HpySE526I ACGT 1 cut(s) 201
Hsp92I GRCGYC 2 cut(s) 693, 981
Hsp92II CATG 4 cut(s) 594, 998, 1148, 1363
HspAI GCGC 2 cut(s) 232, 534
Kzo9I GATC 7 cut(s) 181, 380, 796, 1216, 1356, 1433, 1463
LmnI GCTCC 3 cut(s) 256, 343, 458
Lsp1109I GCAGC 4 cut(s) 56, 333, 589, 754
LweI GCATC 5 cut(s) 614, 646, 771, 779, 1054
MaeI CTAG 4 cut(s) 246, 377, 680, 1325
MaeII ACGT 1 cut(s) 201
MaeIII GTNAC 7 cut(s) 29, 88, 583, 900, 1166, 1320, 1455
MalI GATC 7 cut(s) 183, 382, 798, 1218, 1358, 1435, 1465
MboI GATC 7 cut(s) 181, 380, 796, 1216, 1356, 1433, 1463
MflI RGATCY 1 cut(s) 380
MhlI GDGCHC 3 cut(s) 253, 463, 488
MluCI AATT 5 cut(s) 45, 450, 489, 1132, 1425
MluI ACGCGT 2 cut(s) 190, 732
MlyI GAGTC 1 cut(s) 923
MmeI TCCRAC 1 cut(s) 315
MseI TTAA 6 cut(s) 11, 302, 785, 884, 968, 1428
MslI CAYNNNNRTG 2 cut(s) 999, 1384
MspCI CTTAAG 2 cut(s) 301, 784
MspR9I CCNGG 3 cut(s) 268, 648, 1061
MvaI CCWGG 3 cut(s) 268, 648, 1061
MvnI CGCG 2 cut(s) 192, 734
MwoI GCNNNNNNNGC 2 cut(s) 333, 540
NcoI CCATGG 1 cut(s) 1144
NdeII GATC 7 cut(s) 181, 380, 796, 1216, 1356, 1433, 1463
NlaIII CATG 4 cut(s) 594, 998, 1148, 1363
NlaIV GGNNCC 3 cut(s) 460, 1150, 1288
NmuCI GTSAC 4 cut(s) 88, 900, 1166, 1455
NsbI TGCGCA 1 cut(s) 233
NspV TTCGAA 1 cut(s) 97
PagI TCATGA 1 cut(s) 1359
PcsI WCGNNNNNNNCGW 1 cut(s) 318
PfeI GAWTC 2 cut(s) 94, 353
PflMI CCANNNNNTGG 1 cut(s) 213
PkrI GCNGC 5 cut(s) 68, 71, 348, 604, 769
PleI GAGTC 1 cut(s) 922
PpsI GAGTC 1 cut(s) 922
PshAI GACNNNNGTC 1 cut(s) 56
Psp1406I AACGTT 1 cut(s) 201
Psp6I CCWGG 3 cut(s) 266, 646, 1059
PspGI CCWGG 3 cut(s) 266, 646, 1059
PspN4I GGNNCC 3 cut(s) 460, 1150, 1288
PspPI GGNCC 3 cut(s) 219, 1004, 1258
PsuI RGATCY 1 cut(s) 380
RsaI GTAC 4 cut(s) 162, 360, 595, 678
RsaNI GTAC 4 cut(s) 161, 359, 594, 677
RseI CAYNNNNRTG 2 cut(s) 999, 1384
SaqAI TTAA 6 cut(s) 11, 302, 785, 884, 968, 1428
SatI GCNGC 5 cut(s) 67, 70, 347, 603, 768
Sau3AI GATC 7 cut(s) 181, 380, 796, 1216, 1356, 1433, 1463
Sau96I GGNCC 3 cut(s) 219, 1004, 1258
SchI GAGTC 1 cut(s) 923
ScrFI CCNGG 3 cut(s) 268, 648, 1061
SduI GDGCHC 3 cut(s) 253, 463, 488
SfaNI GCATC 5 cut(s) 614, 646, 771, 779, 1054
SfcI CTRYAG 1 cut(s) 1242
SfuI TTCGAA 1 cut(s) 97
SinI GGWCC 3 cut(s) 219, 1004, 1258
SmiMI CAYNNNNRTG 2 cut(s) 999, 1384
SmlI CTYRAG 4 cut(s) 301, 481, 784, 1467
SmoI CTYRAG 4 cut(s) 301, 481, 784, 1467
Sse9I AATT 5 cut(s) 45, 450, 489, 1132, 1425
SsiI CCGC 1 cut(s) 66
SspI AATATT 1 cut(s) 105
SspMI CTAG 4 cut(s) 246, 377, 680, 1325
StyD4I CCNGG 3 cut(s) 266, 646, 1059
StyI CCWWGG 1 cut(s) 1144
TaaI ACNGT 3 cut(s) 598, 832, 847
TaiI ACGT 1 cut(s) 204
TaqI TCGA 4 cut(s) 97, 312, 612, 1277
TasI AATT 5 cut(s) 45, 450, 489, 1132, 1425
TatI WGTACW 1 cut(s) 160
TauI GCSGC 1 cut(s) 69
TfiI GAWTC 2 cut(s) 94, 353
Tru1I TTAA 6 cut(s) 11, 302, 785, 884, 968, 1428
Tru9I TTAA 6 cut(s) 11, 302, 785, 884, 968, 1428
TscAI CASTG 3 cut(s) 60, 810, 1288
TseFI GTSAC 4 cut(s) 88, 900, 1166, 1455
TseI GCWGC 4 cut(s) 69, 346, 602, 767
Tsp45I GTSAC 4 cut(s) 88, 900, 1166, 1455
TspDTI ATGAA 3 cut(s) 945, 1170, 1358
TspGWI ACGGA 2 cut(s) 98, 211
TspRI CASTG 3 cut(s) 60, 810, 1288
Van91I CCANNNNNTGG 1 cut(s) 213
Vha464I CTTAAG 2 cut(s) 301, 784
VpaK11BI GGWCC 3 cut(s) 219, 1004, 1258
XmiI GTMKAC 2 cut(s) 187, 1206
XspI CTAG 4 cut(s) 246, 377, 680, 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.