RchiOBHm_Chr6g0247891

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000144
Physical Location & Seq
Forward (+)
3889921 .. 3891450
1530 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22222

Sequence Viewer

Length: 1530 bp
ATGAGTGAGGGGCGTCTGTTTTTCGCAAATGGAAACCTGCGATACTTCCTGGCCTTTGCCAAATCACTATACTTCAAGTTCAAGAAACTACTTGAATACAAGGGAGAGCAAAAGTGCAGTAGCCTCAGTAGTGATTATGGATGCTGGCATGGGTTACCTGAAGAAATCTTGGAGAAAATTGTGCAGAATCTGGGGTTAAGTGATCGAATACGCTTGAGCATCCTTTGCAAGTCTTGGAGGCCAGTTGTTATGAATAGTTCCGCACATGAATTTCCCTGGTTAGTACTTCCTCAATCCCCGGATTGCAGCAATGACAAAACTCTAAGCTTTTTCAGCCTCTCCGATGGCAAAGTTGTCGATTTGAAGCTGCCCAAGCAAGTTCAAGGAGGATGGTTTTATGGATCTTCTAAAGGGTGGCTGATTATGATCAAGGAACAAGGACTAAACTCTCAGATATTTCTACTCAATCCAATTTCAGGGGACCTACACCAGCTTCCATCCTTGGCAACAATTCCATCTTTTCAAAAGTATGTAGAAGACAAAAAATGGAAACTTTACGGCGGCTCCCTTTTCTTTCATCAAATTGTGTTATCTACCTCAAATGTTAATTCAGATCAATGTGTTGTAGCAGCAAGTTTTGATTCTTGCGATGAACTGGCGTTGTGCAGACCTGGAGGCAAAACATGGAGTGTCTTTCGTCCATTAGATCATGAACACGAAGGCCTTGCCCAATTATTATTTTCCAGTGGTAAGCTATACGCCTTGATTGGTGGTGAGATTAAGAAAGAAGGTATTGTAGCTCAGACCTTAAGATTTGGAGATCATGCACTGGAACTGATGATGGTCTATGTTGGTGCATTAATCATACCGCCAATAGGGGAGATTGAGGAGTACAATGACCACGAAGTCTACTTACAAGGTCTGACTAGCTCATTCTTGTTAGAATCAACCAACAATGAAGTCCTACTGATTCATAAAGTGGACGACTATTTTATAATGGTAAATAACGATTCCGAGGAGGACTCGGAAGCAGATATTCTTGAAGGCGAGGATGAAGGCAACGACATGGAAGAAGAAGGCAATTACGATGAAGGTGATGATAATTATAATGATAATGATGCTGAAGATGTGGAAGGTAATGATGAGGATGAAGAAGAAGAAGATGAATACTATAATGAAAACAATGATTGGAACGAGTCTATGTATGCGAGGACAAACAGCTTTAAAGTATATAAGATTGATTCCAAAACTGACACAAACAATTTTCTTAGGTTACAAAGTTTGGGAGACCAGATGTTGTTTTTGGCCGAGCACGGTTCTTTGTCTCTCTGCGCAACGGATTTTAAAGAATCCGAAAAGAATTGCATTTATTTTGCAACAAAGGCAACAATGAGACATGTGCTTCCAAAACCACAAACATCTCGCGAGATTGGTCTCTTCAACTTGGATACAGGTAAAATTAAGAGATCTTTTCCAAGCATCAACTTTTCAACTCGGTCTCGAACAAGTTGGTATGTTCCAATTTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

509

Amino Acids

57.88

Weight (kDa)

4.68

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 49 - 85 2.5e-08 F-box domain
Beta-prop_KIB1-4 PF03478 110 - 481 3.1e-39 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 995, 1107, 1528
AasI GACNNNNNNGTC 1 cut(s) 905
Acc16I TGCGCA 1 cut(s) 1333
Acc36I ACCTGC 1 cut(s) 45
AccI GTMKAC 1 cut(s) 909
AccII CGCG 1 cut(s) 1425
AciI CCGC 3 cut(s) 261, 561, 869
AclWI GGATC 1 cut(s) 409
AcoI YGGCCR 1 cut(s) 1305
AcsI RAATTY 1 cut(s) 269
AcuI CTGAAG 2 cut(s) 180, 1143
AcyI GRCGYC 1 cut(s) 13
AfaI GTAC 2 cut(s) 285, 893
AfiI CCNNNNNNNGG 2 cut(s) 476, 875
AflII CTTAAG 1 cut(s) 808
AflIII ACRYGT 1 cut(s) 1396
AgsI TTSAA 9 cut(s) 76, 82, 95, 364, 383, 524, 1043, 1441, 1491
AjnI CCWGG 3 cut(s) 48, 275, 670
AluBI AGCT 7 cut(s) 327, 367, 493, 754, 800, 930, 1221
AluI AGCT 7 cut(s) 327, 367, 493, 754, 800, 930, 1221
Alw21I GWGCWC 1 cut(s) 1314
Alw26I GTCTC 5 cut(s) 1281, 1329, 1387, 1439, 1503
AlwI GGATC 1 cut(s) 409
AlwNI CAGNNNCTG 1 cut(s) 190
AoxI GGCC 4 cut(s) 51, 239, 721, 1305
ApeKI GCWGC 3 cut(s) 306, 367, 629
ApoI RAATTY 1 cut(s) 269
AseI ATTAAT 1 cut(s) 860
AspLEI GCGC 1 cut(s) 1334
AspS9I GGNCC 1 cut(s) 481
AsuC2I CCSGG 1 cut(s) 299
AsuHPI GGTGA 2 cut(s) 785, 1106
AvaII GGWCC 1 cut(s) 481
BarI GAAGNNNNNNTAC 2 cut(s) 897, 929
BbsI GAAGAC 1 cut(s) 543
Bbv12I GWGCWC 1 cut(s) 1314
BbvI GCAGC 3 cut(s) 318, 354, 641
BccI CCATC 5 cut(s) 338, 384, 505, 523, 835
BceAI ACGGC 1 cut(s) 574
BcgI CGANNNNNNTGC 4 cut(s) 337, 371, 707, 741
BciT130I CCWGG 3 cut(s) 50, 277, 672
BciVI GTATCC 1 cut(s) 1441
BclI TGATCA 1 cut(s) 426
BcnI CCSGG 1 cut(s) 299
BcoDI GTCTC 5 cut(s) 1281, 1329, 1387, 1439, 1503
BfaI CTAG 1 cut(s) 927
BfrI CTTAAG 1 cut(s) 808
BfuAI ACCTGC 1 cut(s) 45
BfuI GTATCC 1 cut(s) 1441
BglII AGATCT 1 cut(s) 1466
BisI GCNGC 4 cut(s) 307, 368, 562, 630
BlsI GCNGC 4 cut(s) 308, 369, 563, 631
BmcAI AGTACT 1 cut(s) 285
Bme1390I CCNGG 4 cut(s) 50, 277, 299, 672
Bme18I GGWCC 1 cut(s) 481
BmgT120I GGNCC 1 cut(s) 481
BmiI GGNNCC 2 cut(s) 482, 565
BmrFI CCNGG 4 cut(s) 50, 277, 299, 672
BmsI GCATC 4 cut(s) 131, 228, 1108, 1488
BpiI GAAGAC 1 cut(s) 543
BplI GAGNNNNNCTC 2 cut(s) 1007, 1039
BpmI CTGGAG 1 cut(s) 693
BpuEI CTTGAG 1 cut(s) 235
BpuMI CCSGG 1 cut(s) 299
BsaBI GATNNNNATC 1 cut(s) 425
BsaHI GRCGYC 1 cut(s) 13
BsaI GGTCTC 3 cut(s) 1281, 1439, 1503
BsaJI CCNNGG 4 cut(s) 275, 297, 501, 1014
BsaXI ACNNNNNCTCC 2 cut(s) 548, 578
Bsc4I CCNNNNNNNGG 2 cut(s) 476, 875
Bse1I ACTGG 4 cut(s) 242, 660, 744, 834
Bse3DI GCAATG 1 cut(s) 316
Bse8I GATNNNNATC 1 cut(s) 425
BseBI CCWGG 3 cut(s) 50, 277, 672
BseDI CCNNGG 4 cut(s) 275, 297, 501, 1014
BseGI GGATG 6 cut(s) 146, 219, 395, 497, 1057, 1153
BseJI GATNNNNATC 1 cut(s) 425
BseLI CCNNNNNNNGG 2 cut(s) 476, 875
BseMI GCAATG 1 cut(s) 316
BseMII CTCAG 3 cut(s) 139, 464, 815
BseNI ACTGG 4 cut(s) 242, 660, 744, 834
BseRI GAGGAG 2 cut(s) 902, 1031
BseXI GCAGC 3 cut(s) 318, 354, 641
BsgI GTGCAG 3 cut(s) 136, 203, 685
Bsh1236I CGCG 1 cut(s) 1425
BshFI GGCC 4 cut(s) 53, 241, 723, 1307
BsiHKAI GWGCWC 1 cut(s) 1314
BsiSI CCGG 1 cut(s) 299
BslFI GGGAC 1 cut(s) 494
BslI CCNNNNNNNGG 2 cut(s) 476, 875
BsmAI GTCTC 5 cut(s) 1281, 1329, 1387, 1439, 1503
BsmFI GGGAC 1 cut(s) 494
BsnI GGCC 4 cut(s) 53, 241, 723, 1307
Bso31I GGTCTC 3 cut(s) 1281, 1439, 1503
Bsp1286I GDGCHC 1 cut(s) 1314
Bsp143I GATC 7 cut(s) 202, 401, 426, 613, 706, 820, 1466
Bsp68I TCGCGA 1 cut(s) 1425
BspACI CCGC 3 cut(s) 261, 561, 869
BspANI GGCC 4 cut(s) 53, 241, 723, 1307
BspCNI CTCAG 3 cut(s) 138, 463, 814
BspFNI CGCG 1 cut(s) 1425
BspHI TCATGA 1 cut(s) 709
BspLI GGNNCC 2 cut(s) 482, 565
BspMI ACCTGC 1 cut(s) 45
BspPI GGATC 1 cut(s) 409
BspTI CTTAAG 1 cut(s) 808
BspTNI GGTCTC 3 cut(s) 1281, 1439, 1503
BsrDI GCAATG 1 cut(s) 316
BsrI ACTGG 4 cut(s) 242, 660, 744, 834
BssECI CCNNGG 4 cut(s) 275, 297, 501, 1014
BssMI GATC 7 cut(s) 202, 401, 426, 613, 706, 820, 1466
BssNI GRCGYC 1 cut(s) 13
BssT1I CCWWGG 1 cut(s) 501
Bst2UI CCWGG 3 cut(s) 50, 277, 672
Bst4CI ACNGT 1 cut(s) 1316
Bst6I CTCTTC 1 cut(s) 1442
BstACI GRCGYC 1 cut(s) 13
BstAFI CTTAAG 1 cut(s) 808
BstAPI GCANNNNNTGC 1 cut(s) 225
BstC8I GCNNGC 1 cut(s) 146
BstDEI CTNAG 5 cut(s) 125, 323, 450, 801, 1268
BstEII GGTNACC 1 cut(s) 153
BstF5I GGATG 6 cut(s) 146, 219, 395, 497, 1057, 1153
BstFNI CGCG 1 cut(s) 1425
BstHHI GCGC 1 cut(s) 1334
BstKTI GATC 7 cut(s) 205, 404, 429, 616, 709, 823, 1469
BstMAI GTCTC 5 cut(s) 1281, 1329, 1387, 1439, 1503
BstMBI GATC 7 cut(s) 202, 401, 426, 613, 706, 820, 1466
BstMWI GCNNNNNNNGC 4 cut(s) 225, 333, 373, 1382
BstNI CCWGG 3 cut(s) 50, 277, 672
BstNSI RCATGY 1 cut(s) 1400
BstPI GGTNACC 1 cut(s) 153
BstSCI CCNGG 4 cut(s) 48, 275, 297, 670
BstUI CGCG 1 cut(s) 1425
BstV1I GCAGC 3 cut(s) 318, 354, 641
BstV2I GAAGAC 1 cut(s) 543
BstX2I RGATCY 2 cut(s) 401, 1466
BstYI RGATCY 2 cut(s) 401, 1466
BsuI GTATCC 1 cut(s) 1441
BsuRI GGCC 4 cut(s) 53, 241, 723, 1307
BtgZI GCGATG 1 cut(s) 663
BtsCI GGATG 6 cut(s) 146, 219, 395, 497, 1057, 1153
BtsIMutI CAGTG 2 cut(s) 751, 827
BtuMI TCGCGA 1 cut(s) 1425
BveI ACCTGC 1 cut(s) 45
Cac8I GCNNGC 1 cut(s) 146
CaiI CAGNNNCTG 1 cut(s) 190
CciI TCATGA 1 cut(s) 709
CfoI GCGC 1 cut(s) 1334
Cfr13I GGNCC 1 cut(s) 481
CseI GACGC 1 cut(s) 2
Csp6I GTAC 2 cut(s) 284, 892
CviAII CATG 7 cut(s) 149, 266, 684, 710, 824, 1066, 1397
CviQI GTAC 2 cut(s) 284, 892
DdeI CTNAG 5 cut(s) 125, 323, 450, 801, 1268
DpnI GATC 7 cut(s) 204, 403, 428, 615, 708, 822, 1468
DpnII GATC 7 cut(s) 202, 401, 426, 613, 706, 820, 1466
DraI TTTAAA 2 cut(s) 1225, 1345
DrdI GACNNNNNNGTC 1 cut(s) 905
DseDI GACNNNNNNGTC 1 cut(s) 905
EaeI YGGCCR 1 cut(s) 1305
Eam1104I CTCTTC 1 cut(s) 1442
EarI CTCTTC 1 cut(s) 1442
Eco130I CCWWGG 1 cut(s) 501
Eco147I AGGCCT 1 cut(s) 723
Eco31I GGTCTC 3 cut(s) 1281, 1439, 1503
Eco47I GGWCC 1 cut(s) 481
Eco57I CTGAAG 2 cut(s) 180, 1143
Eco91I GGTNACC 1 cut(s) 153
EcoO109I RGGNCCY 1 cut(s) 481
EcoO65I GGTNACC 1 cut(s) 153
EcoRII CCWGG 3 cut(s) 48, 275, 670
EcoT14I CCWWGG 1 cut(s) 501
ErhI CCWWGG 1 cut(s) 501
FaeI CATG 7 cut(s) 152, 269, 687, 713, 827, 1069, 1400
FaqI GGGAC 1 cut(s) 494
FatI CATG 7 cut(s) 148, 265, 683, 709, 823, 1065, 1396
FbaI TGATCA 1 cut(s) 426
FblI GTMKAC 1 cut(s) 909
Fnu4HI GCNGC 4 cut(s) 307, 368, 562, 630
FokI GGATG 6 cut(s) 153, 206, 402, 484, 1064, 1160
Fsp4HI GCNGC 4 cut(s) 307, 368, 562, 630
FspBI CTAG 1 cut(s) 927
FspI TGCGCA 1 cut(s) 1333
GlaI GCGC 1 cut(s) 1333
GluI GCNGC 4 cut(s) 307, 368, 562, 630
GsuI CTGGAG 1 cut(s) 693
HaeIII GGCC 4 cut(s) 53, 241, 723, 1307
HapII CCGG 1 cut(s) 299
HgaI GACGC 1 cut(s) 2
HhaI GCGC 1 cut(s) 1334
Hin1I GRCGYC 1 cut(s) 13
Hin1II CATG 7 cut(s) 152, 269, 687, 713, 827, 1069, 1400
Hin6I GCGC 1 cut(s) 1332
HinP1I GCGC 1 cut(s) 1332
HindIII AAGCTT 1 cut(s) 325
HinfI GANTC 9 cut(s) 187, 641, 944, 970, 1010, 1022, 1196, 1241, 1349
HpaII CCGG 1 cut(s) 299
HphI GGTGA 2 cut(s) 785, 1106
Hpy166II GTNNAC 2 cut(s) 910, 982
Hpy188I TCNGA 8 cut(s) 343, 453, 613, 804, 924, 1015, 1027, 1354
Hpy188III TCNNGA 5 cut(s) 82, 710, 1040, 1424, 1500
Hpy8I GTNNAC 2 cut(s) 910, 982
HpyAV CCTTC 7 cut(s) 713, 782, 1037, 1049, 1070, 1085, 1127
HpyCH4III ACNGT 1 cut(s) 1316
HpyCH4V TGCA 9 cut(s) 117, 184, 228, 306, 666, 827, 857, 1365, 1376
HpyF10VI GCNNNNNNNGC 4 cut(s) 225, 333, 373, 1382
HpyF3I CTNAG 5 cut(s) 125, 323, 450, 801, 1268
Hsp92I GRCGYC 1 cut(s) 13
Hsp92II CATG 7 cut(s) 152, 269, 687, 713, 827, 1069, 1400
HspAI GCGC 1 cut(s) 1332
Ksp22I TGATCA 1 cut(s) 426
Kzo9I GATC 7 cut(s) 202, 401, 426, 613, 706, 820, 1466
LmnI GCTCC 1 cut(s) 569
Lsp1109I GCAGC 3 cut(s) 318, 354, 641
LweI GCATC 4 cut(s) 131, 228, 1108, 1488
MaeI CTAG 1 cut(s) 927
MaeIII GTNAC 2 cut(s) 153, 1272
MalI GATC 7 cut(s) 204, 403, 428, 615, 708, 822, 1468
MboI GATC 7 cut(s) 202, 401, 426, 613, 706, 820, 1466
MflI RGATCY 2 cut(s) 401, 1466
MhlI GDGCHC 1 cut(s) 1314
MlyI GAGTC 2 cut(s) 1016, 1205
MseI TTAA 8 cut(s) 197, 606, 780, 809, 860, 1224, 1344, 1461
MspCI CTTAAG 1 cut(s) 808
MspI CCGG 1 cut(s) 299
MspR9I CCNGG 4 cut(s) 50, 277, 299, 672
MvaI CCWGG 3 cut(s) 50, 277, 672
MvnI CGCG 1 cut(s) 1425
MwoI GCNNNNNNNGC 4 cut(s) 225, 333, 373, 1382
NciI CCSGG 1 cut(s) 299
NdeII GATC 7 cut(s) 202, 401, 426, 613, 706, 820, 1466
NlaIII CATG 7 cut(s) 152, 269, 687, 713, 827, 1069, 1400
NlaIV GGNNCC 2 cut(s) 482, 565
NmeAIII GCCGAG 1 cut(s) 1333
NruI TCGCGA 1 cut(s) 1425
NsbI TGCGCA 1 cut(s) 1333
NspI RCATGY 1 cut(s) 1400
PagI TCATGA 1 cut(s) 709
PceI AGGCCT 1 cut(s) 723
PciI ACATGT 1 cut(s) 1396
PfeI GAWTC 7 cut(s) 187, 641, 944, 970, 1010, 1241, 1349
PkrI GCNGC 4 cut(s) 308, 369, 563, 631
PleI GAGTC 2 cut(s) 1016, 1204
PpsI GAGTC 2 cut(s) 1016, 1204
PpuMI RGGWCCY 1 cut(s) 481
PscI ACATGT 1 cut(s) 1396
PshBI ATTAAT 1 cut(s) 860
PsiI TTATAA 3 cut(s) 995, 1107, 1528
Psp5II RGGWCCY 1 cut(s) 481
Psp6I CCWGG 3 cut(s) 48, 275, 670
PspEI GGTNACC 1 cut(s) 153
PspGI CCWGG 3 cut(s) 48, 275, 670
PspN4I GGNNCC 2 cut(s) 482, 565
PspPI GGNCC 1 cut(s) 481
PspPPI RGGWCCY 1 cut(s) 481
PstNI CAGNNNCTG 1 cut(s) 190
PsuI RGATCY 2 cut(s) 401, 1466
RruI TCGCGA 1 cut(s) 1425
RsaI GTAC 2 cut(s) 285, 893
RsaNI GTAC 2 cut(s) 284, 892
SaqAI TTAA 8 cut(s) 197, 606, 780, 809, 860, 1224, 1344, 1461
SatI GCNGC 4 cut(s) 307, 368, 562, 630
Sau3AI GATC 7 cut(s) 202, 401, 426, 613, 706, 820, 1466
Sau96I GGNCC 1 cut(s) 481
ScaI AGTACT 1 cut(s) 285
SchI GAGTC 2 cut(s) 1016, 1205
ScrFI CCNGG 4 cut(s) 50, 277, 299, 672
SduI GDGCHC 1 cut(s) 1314
SfaNI GCATC 4 cut(s) 131, 228, 1108, 1488
SinI GGWCC 1 cut(s) 481
SmlI CTYRAG 2 cut(s) 214, 808
SmoI CTYRAG 2 cut(s) 214, 808
SseBI AGGCCT 1 cut(s) 723
SsiI CCGC 3 cut(s) 261, 561, 869
SspMI CTAG 1 cut(s) 927
StuI AGGCCT 1 cut(s) 723
StyD4I CCNGG 4 cut(s) 48, 275, 297, 670
StyI CCWWGG 1 cut(s) 501
TaaI ACNGT 1 cut(s) 1316
TaqI TCGA 3 cut(s) 205, 357, 1501
TaqII GACCGA 1 cut(s) 1485
TatI WGTACW 2 cut(s) 283, 891
TauI GCSGC 1 cut(s) 564
TfiI GAWTC 7 cut(s) 187, 641, 944, 970, 1010, 1241, 1349
Tru1I TTAA 8 cut(s) 197, 606, 780, 809, 860, 1224, 1344, 1461
Tru9I TTAA 8 cut(s) 197, 606, 780, 809, 860, 1224, 1344, 1461
TscAI CASTG 2 cut(s) 751, 834
TseI GCWGC 3 cut(s) 306, 367, 629
TspGWI ACGGA 1 cut(s) 1352
TspRI CASTG 2 cut(s) 751, 834
Vha464I CTTAAG 1 cut(s) 808
VpaK11BI GGWCC 1 cut(s) 481
VspI ATTAAT 1 cut(s) 860
XapI RAATTY 1 cut(s) 269
XceI RCATGY 1 cut(s) 1400
XmiI GTMKAC 1 cut(s) 909
XspI CTAG 1 cut(s) 927
ZrmI AGTACT 1 cut(s) 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.