Rroxscaffold_7G00187880

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000144
Physical Location & Seq
Reverse (-)
27302082 .. 27303608
1527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00187880.1

Sequence Viewer

Length: 1527 bp
ATGCTCTTAACTGTGACTAAGACTCTATTTTTGGCTCAGAAGAATGTGGGAGACTACCTCGCTCTAACCATATCTGGTTTCCTCAAGAGCCTTCAAACTTATTGTTACCAGAGACTAGACAACAAGAAAAAGCAAAATGACTTGGATCATTGGCAGGAACCACCTGAAGATATCAAAGAGATGATTGTTCAGCACATGAGTTTCAGTGGTCGAGTTCGTTTAAGCAGTTTGTGCAAGTCTTGGAGGTTGGTTTCTATGCGAAGAGATATCCGTGCTCCTAGACAACTCCCATGGTTAGTACACCCTCAACTACCAAACTGTCATACCTACTTGAGATTCTCAAGCCTCTCTGAGGGCAAAGTTTTCAAGCTGAGGCTGCCTAGGCCGATTTTCATGAAGTCGAGGCTGGCCAGGCTAGTTCCGAGATGTTTCCATGTGCAATGGTTTATTTGTTCTTCCAAAGGTTGGTTGATTTTGTGGAAGTGGGACTATGTCGGGCTAAAACGTGAGATGTTTATCTTTCTATTAAATCCAGTTTCAGGAGCCCAACACCAACTTCCATCGTTAAAAACAATTCCATCTTATGGAATACATTCTACCATTGATGGATTGGTTTTATCCAGCCCAGACATCTCGGAATGTATGGTGGCAGCAGTTCATAATAGTGGCGAACTGGCTTTGTGTAGACCTAGAGACAAAAGCTGGAGTGTCTACCAAGTATTTGAAGAACATGAAAATCTTGTCGAGAGAGTCAACAGAATATTGTTTTCCAGCACTGGCGTGCTATATGCCTTGATTACAGGTAGCCGCAATGGTGGTGGTGTTGATGCAGACCGCACTTTAAAGTTCGGAGATGAGGAAGTGAAATTGAAGCTGATCTATGACATAGAGGAGTGGTGGATTGATGCCGGGGTTGGTCCGGTAGGGCTTTTGTGCATGTCATACTTGTTGGAATCAACAAACAACGAAATTTTATTGATCCATCAAATTCTGAGAATGGATGTTGATGAAGATGATGAGGAATTTATGGAAGGCCATGAGGACAACGAGGAAGGCAATTACAACGAAGAAGAAGAAGAAGAAGGGGATGATAATAACATGGAAGATAATGAGGAGCATGAGAGCATTCTTGAGTGGGCTGGACAAATCTTACTCAGTGTTTATGCTAAAGCAAAGCAACTAAACCCAGATTTTAATGTTGACAAGGAAGATGCAGAGACAATATGTTTTAGAGTATACAAGATTGATCCAGACAATAACTACTATCATAAGGTAGAAAACCTAGGGGATCAAATATTTTTTGTGGCAGAGGATGGTTCTTCCTTGTCCCTTCTAGCTAGTGATTTCAAAGAGTTACAAGGGAATTGCATCTATTTTGCAACAACAGGAAGTAATATAGAAACTTCCTGCATCTCTTGTGAGGTCGGCATTTTCTACCTGGATAGTGGAAAAATTGAGCAACCCTTCCCAATTGTTAAGATGCCAAGGTACTCTCATCTTAGTTGGTTCACCCCGAGTTTATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

508

Amino Acids

58.59

Weight (kDa)

5.05

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 114 - 460 1.6e-31 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 465, 584
AccI GTMKAC 3 cut(s) 685, 711, 1236
AciI CCGC 2 cut(s) 808, 835
AclWI GGATC 4 cut(s) 153, 973, 1241, 1296
AcoI YGGCCR 1 cut(s) 408
AcsI RAATTY 3 cut(s) 969, 987, 1022
AcuI CTGAAG 1 cut(s) 186
AfaI GTAC 2 cut(s) 300, 1490
AfiI CCNNNNNNNGG 4 cut(s) 352, 465, 539, 584
AgsI TTSAA 5 cut(s) 95, 367, 725, 871, 1348
AjnI CCWGG 2 cut(s) 410, 1437
AjuI GAANNNNNNNTTGG 2 cut(s) 540, 572
AleI CACNNNNGTG 1 cut(s) 779
AluBI AGCT 4 cut(s) 370, 702, 874, 1337
AluI AGCT 4 cut(s) 370, 702, 874, 1337
Alw21I GWGCWC 1 cut(s) 277
Alw26I GTCTC 4 cut(s) 45, 106, 687, 1211
AlwI GGATC 4 cut(s) 153, 973, 1241, 1296
Ama87I CYCGRG 1 cut(s) 1513
AoxI GGCC 3 cut(s) 383, 408, 1033
ApeKI GCWGC 2 cut(s) 376, 650
ApoI RAATTY 3 cut(s) 969, 987, 1022
ArsI GACNNNNNNTTYG 2 cut(s) 13, 45
Asp700I GAANNNNTTC 1 cut(s) 592
AspA2I CCTAGG 2 cut(s) 380, 1282
AspS9I GGNCC 1 cut(s) 917
AsuC2I CCSGG 1 cut(s) 910
AsuHPI GGTGA 1 cut(s) 1501
AvaI CYCGRG 1 cut(s) 1513
AvaII GGWCC 1 cut(s) 917
AvrII CCTAGG 2 cut(s) 380, 1282
BalI TGGCCA 1 cut(s) 410
BanII GRGCYC 1 cut(s) 547
Bbv12I GWGCWC 1 cut(s) 277
BbvCI CCTCAGC 1 cut(s) 371
BbvI GCAGC 2 cut(s) 363, 662
BccI CCATC 5 cut(s) 568, 586, 599, 990, 1307
BciT130I CCWGG 2 cut(s) 412, 1439
BcnI CCSGG 1 cut(s) 910
BcoDI GTCTC 4 cut(s) 45, 106, 687, 1211
BfaI CTAG 8 cut(s) 116, 279, 381, 416, 690, 1283, 1334, 1338
BisI GCNGC 3 cut(s) 377, 651, 808
BlnI CCTAGG 2 cut(s) 380, 1282
BlsI GCNGC 3 cut(s) 378, 652, 809
Bme1390I CCNGG 3 cut(s) 412, 910, 1439
Bme18I GGWCC 1 cut(s) 917
BmeT110I CYCGRG 1 cut(s) 1513
BmgT120I GGNCC 1 cut(s) 917
BmiI GGNNCC 2 cut(s) 159, 544
BmrFI CCNGG 3 cut(s) 412, 910, 1439
BmsI GCATC 6 cut(s) 817, 895, 1201, 1377, 1419, 1470
BplI GAGNNNNNCTC 2 cut(s) 42, 74
BpmI CTGGAG 1 cut(s) 724
Bpu10I CCTNAGC 1 cut(s) 371
BpuEI CTTGAG 4 cut(s) 68, 325, 352, 1151
BpuMI CCSGG 1 cut(s) 910
BsaBI GATNNNNATC 1 cut(s) 515
BsaJI CCNNGG 5 cut(s) 290, 380, 909, 1282, 1484
BsaWI WCCGGW 1 cut(s) 919
Bsc4I CCNNNNNNNGG 4 cut(s) 352, 465, 539, 584
Bse1I ACTGG 3 cut(s) 533, 678, 781
Bse3DI GCAATG 2 cut(s) 446, 817
Bse8I GATNNNNATC 1 cut(s) 515
BseBI CCWGG 2 cut(s) 412, 1439
BseDI CCNNGG 5 cut(s) 290, 380, 909, 1282, 1484
BseGI GGATG 3 cut(s) 1006, 1093, 1318
BseJI GATNNNNATC 1 cut(s) 515
BseLI CCNNNNNNNGG 4 cut(s) 352, 465, 539, 584
BseMI GCAATG 2 cut(s) 446, 817
BseMII CTCAG 5 cut(s) 50, 342, 362, 983, 1168
BseNI ACTGG 3 cut(s) 533, 678, 781
BseRI GAGGAG 2 cut(s) 905, 1127
BseXI GCAGC 2 cut(s) 363, 662
BshFI GGCC 3 cut(s) 385, 410, 1035
BsiHKAI GWGCWC 1 cut(s) 277
BsiHKCI CYCGRG 1 cut(s) 1513
BsiSI CCGG 2 cut(s) 909, 920
BslFI GGGAC 2 cut(s) 500, 1312
BslI CCNNNNNNNGG 4 cut(s) 352, 465, 539, 584
BsmAI GTCTC 4 cut(s) 45, 106, 687, 1211
BsmFI GGGAC 2 cut(s) 500, 1312
BsmI GAATGC 1 cut(s) 1125
BsnI GGCC 3 cut(s) 385, 410, 1035
BsoBI CYCGRG 1 cut(s) 1513
Bsp1286I GDGCHC 2 cut(s) 277, 547
Bsp143I GATC 5 cut(s) 145, 876, 978, 1246, 1288
Bsp19I CCATGG 1 cut(s) 290
BspACI CCGC 2 cut(s) 808, 835
BspANI GGCC 3 cut(s) 385, 410, 1035
BspCNI CTCAG 5 cut(s) 49, 343, 363, 984, 1167
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 2 cut(s) 159, 544
BspPI GGATC 4 cut(s) 153, 973, 1241, 1296
BsrDI GCAATG 2 cut(s) 446, 817
BsrI ACTGG 3 cut(s) 533, 678, 781
BssECI CCNNGG 5 cut(s) 290, 380, 909, 1282, 1484
BssMI GATC 5 cut(s) 145, 876, 978, 1246, 1288
BssNAI GTATAC 1 cut(s) 1237
BssT1I CCWWGG 4 cut(s) 290, 380, 1282, 1484
Bst1107I GTATAC 1 cut(s) 1237
Bst2UI CCWGG 2 cut(s) 412, 1439
Bst4CI ACNGT 2 cut(s) 13, 320
Bst6I CTCTTC 1 cut(s) 256
BstAPI GCANNNNNTGC 1 cut(s) 231
BstC8I GCNNGC 2 cut(s) 408, 782
BstDEI CTNAG 7 cut(s) 18, 36, 351, 371, 992, 1154, 1499
BstDSI CCRYGG 1 cut(s) 290
BstENI CCTNNNNNAGG 1 cut(s) 350
BstF5I GGATG 3 cut(s) 1006, 1093, 1318
BstKTI GATC 5 cut(s) 148, 879, 981, 1249, 1291
BstMAI GTCTC 4 cut(s) 45, 106, 687, 1211
BstMBI GATC 5 cut(s) 145, 876, 978, 1246, 1288
BstMWI GCNNNNNNNGC 4 cut(s) 231, 376, 382, 412
BstNI CCWGG 2 cut(s) 412, 1439
BstNSI RCATGY 1 cut(s) 940
BstSCI CCNGG 3 cut(s) 410, 908, 1437
BstV1I GCAGC 2 cut(s) 363, 662
BstZ17I GTATAC 1 cut(s) 1237
BsuRI GGCC 3 cut(s) 385, 410, 1035
BtgI CCRYGG 1 cut(s) 290
BtsCI GGATG 3 cut(s) 1006, 1093, 1318
BtsIMutI CAGTG 3 cut(s) 211, 774, 1162
Cac8I GCNNGC 2 cut(s) 408, 782
CciI TCATGA 1 cut(s) 393
Cfr13I GGNCC 1 cut(s) 917
Csp6I GTAC 2 cut(s) 299, 1489
CspCI CAANNNNNGTGG 2 cut(s) 799, 834
CviAII CATG 9 cut(s) 196, 291, 394, 434, 731, 937, 1037, 1099, 1118
CviQI GTAC 2 cut(s) 299, 1489
DdeI CTNAG 7 cut(s) 18, 36, 351, 371, 992, 1154, 1499
DpnI GATC 5 cut(s) 147, 878, 980, 1248, 1290
DpnII GATC 5 cut(s) 145, 876, 978, 1246, 1288
DraI TTTAAA 1 cut(s) 843
EaeI YGGCCR 1 cut(s) 408
Eam1104I CTCTTC 1 cut(s) 256
EarI CTCTTC 1 cut(s) 256
Eco130I CCWWGG 4 cut(s) 290, 380, 1282, 1484
Eco24I GRGCYC 1 cut(s) 547
Eco32I GATATC 2 cut(s) 172, 268
Eco47I GGWCC 1 cut(s) 917
Eco57I CTGAAG 1 cut(s) 186
Eco88I CYCGRG 1 cut(s) 1513
EcoNI CCTNNNNNAGG 1 cut(s) 350
EcoRII CCWGG 2 cut(s) 410, 1437
EcoRV GATATC 2 cut(s) 172, 268
EcoT14I CCWWGG 4 cut(s) 290, 380, 1282, 1484
EcoT38I GRGCYC 1 cut(s) 547
ErhI CCWWGG 4 cut(s) 290, 380, 1282, 1484
FaeI CATG 9 cut(s) 199, 294, 397, 437, 734, 940, 1040, 1102, 1121
FaqI GGGAC 2 cut(s) 500, 1312
FatI CATG 9 cut(s) 195, 290, 393, 433, 730, 936, 1036, 1098, 1117
FblI GTMKAC 3 cut(s) 685, 711, 1236
Fnu4HI GCNGC 3 cut(s) 377, 651, 808
FokI GGATG 3 cut(s) 1013, 1100, 1325
FriOI GRGCYC 1 cut(s) 547
Fsp4HI GCNGC 3 cut(s) 377, 651, 808
FspBI CTAG 8 cut(s) 116, 279, 381, 416, 690, 1283, 1334, 1338
GluI GCNGC 3 cut(s) 377, 651, 808
GsuI CTGGAG 1 cut(s) 724
HaeIII GGCC 3 cut(s) 385, 410, 1035
HapII CCGG 2 cut(s) 909, 920
Hin1II CATG 9 cut(s) 199, 294, 397, 437, 734, 940, 1040, 1102, 1121
HincII GTYRAC 2 cut(s) 754, 1201
HindII GTYRAC 2 cut(s) 754, 1201
HinfI GANTC 4 cut(s) 22, 336, 750, 953
HpaII CCGG 2 cut(s) 909, 920
HphI GGTGA 1 cut(s) 1501
Hpy166II GTNNAC 7 cut(s) 301, 686, 712, 754, 1201, 1237, 1509
Hpy188I TCNGA 6 cut(s) 39, 352, 423, 637, 851, 993
Hpy188III TCNNGA 6 cut(s) 85, 394, 540, 745, 1130, 1250
Hpy8I GTNNAC 7 cut(s) 301, 686, 712, 754, 1201, 1237, 1509
HpyAV CCTTC 6 cut(s) 101, 1025, 1046, 1076, 1340, 1474
HpyCH4III ACNGT 2 cut(s) 13, 320
HpyCH4IV ACGT 1 cut(s) 505
HpyCH4V TGCA 8 cut(s) 234, 439, 830, 936, 1214, 1368, 1379, 1410
HpyF10VI GCNNNNNNNGC 4 cut(s) 231, 376, 382, 412
HpyF3I CTNAG 7 cut(s) 18, 36, 351, 371, 992, 1154, 1499
HpySE526I ACGT 1 cut(s) 505
Hsp92II CATG 9 cut(s) 199, 294, 397, 437, 734, 940, 1040, 1102, 1121
Kzo9I GATC 5 cut(s) 145, 876, 978, 1246, 1288
LmnI GCTCC 3 cut(s) 280, 542, 1114
Lsp1109I GCAGC 2 cut(s) 363, 662
LweI GCATC 6 cut(s) 817, 895, 1201, 1377, 1419, 1470
MaeI CTAG 8 cut(s) 116, 279, 381, 416, 690, 1283, 1334, 1338
MaeII ACGT 1 cut(s) 505
MaeIII GTNAC 3 cut(s) 13, 104, 1353
MalI GATC 5 cut(s) 147, 878, 980, 1248, 1290
MboI GATC 5 cut(s) 145, 876, 978, 1246, 1288
MfeI CAATTG 1 cut(s) 1470
MhlI GDGCHC 2 cut(s) 277, 547
MlsI TGGCCA 1 cut(s) 410
MluCI AATT 9 cut(s) 573, 866, 969, 987, 1022, 1057, 1363, 1452, 1470
MluNI TGGCCA 1 cut(s) 410
MlyI GAGTC 2 cut(s) 16, 759
MmeI TCCRAC 1 cut(s) 930
Mox20I TGGCCA 1 cut(s) 410
MroXI GAANNNNTTC 1 cut(s) 592
MscI TGGCCA 1 cut(s) 410
MseI TTAA 7 cut(s) 8, 221, 527, 566, 842, 1194, 1476
MslI CAYNNNNRTG 2 cut(s) 663, 779
Msp20I TGGCCA 1 cut(s) 410
MspI CCGG 2 cut(s) 909, 920
MspR9I CCNGG 3 cut(s) 412, 910, 1439
MunI CAATTG 1 cut(s) 1470
Mva1269I GAATGC 1 cut(s) 1125
MvaI CCWGG 2 cut(s) 412, 1439
MwoI GCNNNNNNNGC 4 cut(s) 231, 376, 382, 412
NciI CCSGG 1 cut(s) 910
NcoI CCATGG 1 cut(s) 290
NdeII GATC 5 cut(s) 145, 876, 978, 1246, 1288
NlaIII CATG 9 cut(s) 199, 294, 397, 437, 734, 940, 1040, 1102, 1121
NlaIV GGNNCC 2 cut(s) 159, 544
NmuCI GTSAC 1 cut(s) 13
NspI RCATGY 1 cut(s) 940
OliI CACNNNNGTG 1 cut(s) 779
PagI TCATGA 1 cut(s) 393
PctI GAATGC 1 cut(s) 1125
PdmI GAANNNNTTC 1 cut(s) 592
PfeI GAWTC 2 cut(s) 336, 953
PflFI GACNNNGTC 1 cut(s) 491
PflMI CCANNNNNTGG 2 cut(s) 465, 584
PkrI GCNGC 3 cut(s) 378, 652, 809
PleI GAGTC 2 cut(s) 16, 758
PpsI GAGTC 2 cut(s) 16, 758
Psp6I CCWGG 2 cut(s) 410, 1437
PspGI CCWGG 2 cut(s) 410, 1437
PspN4I GGNNCC 2 cut(s) 159, 544
PspPI GGNCC 1 cut(s) 917
PsyI GACNNNGTC 1 cut(s) 491
RsaI GTAC 2 cut(s) 300, 1490
RsaNI GTAC 2 cut(s) 299, 1489
RseI CAYNNNNRTG 2 cut(s) 663, 779
SaqAI TTAA 7 cut(s) 8, 221, 527, 566, 842, 1194, 1476
SatI GCNGC 3 cut(s) 377, 651, 808
Sau3AI GATC 5 cut(s) 145, 876, 978, 1246, 1288
Sau96I GGNCC 1 cut(s) 917
SchI GAGTC 2 cut(s) 16, 759
ScrFI CCNGG 3 cut(s) 412, 910, 1439
SduI GDGCHC 2 cut(s) 277, 547
SfaNI GCATC 6 cut(s) 817, 895, 1201, 1377, 1419, 1470
SinI GGWCC 1 cut(s) 917
SmiMI CAYNNNNRTG 2 cut(s) 663, 779
SmlI CTYRAG 4 cut(s) 83, 331, 340, 1130
SmoI CTYRAG 4 cut(s) 83, 331, 340, 1130
Sse9I AATT 9 cut(s) 573, 866, 969, 987, 1022, 1057, 1363, 1452, 1470
SsiI CCGC 2 cut(s) 808, 835
SspI AATATT 2 cut(s) 762, 1296
SspMI CTAG 8 cut(s) 116, 279, 381, 416, 690, 1283, 1334, 1338
StyD4I CCNGG 3 cut(s) 410, 908, 1437
StyI CCWWGG 4 cut(s) 290, 380, 1282, 1484
TaaI ACNGT 2 cut(s) 13, 320
TaiI ACGT 1 cut(s) 508
TaqI TCGA 3 cut(s) 211, 401, 744
TasI AATT 9 cut(s) 573, 866, 969, 987, 1022, 1057, 1363, 1452, 1470
TatI WGTACW 1 cut(s) 298
TauI GCSGC 1 cut(s) 810
TfiI GAWTC 2 cut(s) 336, 953
Tru1I TTAA 7 cut(s) 8, 221, 527, 566, 842, 1194, 1476
Tru9I TTAA 7 cut(s) 8, 221, 527, 566, 842, 1194, 1476
TscAI CASTG 3 cut(s) 211, 781, 1162
TseFI GTSAC 1 cut(s) 13
TseI GCWGC 2 cut(s) 376, 650
Tsp45I GTSAC 1 cut(s) 13
TspDTI ATGAA 5 cut(s) 382, 410, 647, 747, 1023
TspGWI ACGGA 1 cut(s) 260
TspRI CASTG 3 cut(s) 211, 781, 1162
Tth111I GACNNNGTC 1 cut(s) 491
Van91I CCANNNNNTGG 2 cut(s) 465, 584
VpaK11BI GGWCC 1 cut(s) 917
XagI CCTNNNNNAGG 1 cut(s) 350
XapI RAATTY 3 cut(s) 969, 987, 1022
XceI RCATGY 1 cut(s) 940
XcmI CCANNNNNNNNNTGG 1 cut(s) 607
XmaJI CCTAGG 2 cut(s) 380, 1282
XmiI GTMKAC 3 cut(s) 685, 711, 1236
XmnI GAANNNNTTC 1 cut(s) 592
XspI CTAG 8 cut(s) 116, 279, 381, 416, 690, 1283, 1334, 1338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.