Rmu_sc0007839.1_g000011

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007839.1
OG0000144
Physical Location & Seq
Forward (+)
35472 .. 38277
2806 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007839.1_g000011.1.cds

Sequence Viewer

Length: 1269 bp
atgcccaggcccaaaatccatcaagaggccacgacatctccttcttgcttgcacttctcccgtcgtcccaccgccggcagcgcctttgtcgccaccagcttttcgcctgttgcacgctggccgtctctccacccaaacatcatcccctgcactccagccaaacacgccacctctcctaaccattcccctcaccagatcggatccaccgaaaccaaaccagataggaatcttctgatcagatcacggcccggccgatcccagcctcaccgttcccccaccaggccgtcaatgcttcaatctaggggcatgccgtctgacagggcatctacttttccgttcgcggcgcgctttaggtttttagagcctctttcgacccatgttttctttaacctgagaaacgacctcagctggttcaccaggtctgtttccttcaagcaattacatgaacacaaaatatctgcaggcaagagaaaacagctcgagaactgcaacgacaaccaaattacttgtcatgggtcagtcgggtgctggcagacaccaccacaagacatcatggaggagattctacagaaaatgggtttaattgctcgtacacacttagccaaggtctgcatgtcttggagctcacttgttatgagtgctgacatccgcattgtgaacttggagctcccaaacccaaagcgattcggaggacaaggcgaattcaagtttcgagaggcttctcaaggttggttgatcattttacgagaaaaaggactcagctttgatatgttcctatacaatccgatttctagagcccaacaccaacttccttccttcgacactattccatctttccaatcttaccagcaagctttgctacggaagggtcataatgccgagaattttgtaactagagttgtgttgtcgagtccaaatatctccgaatgcattgtggcagccgtacgtttcgaccctcagatggaattgggtttgtgcagacctggagacaaaagctggactgtctttgagatactgaatcatgatgagaaccctttaggtttactttttttgcggggcatgctgtacggcttagttgatatttcttgtaataaaaagtccaccaagaatggcatcagcgcagctcgctccttaaactttggggatgatcaggcaatgacagtggaattgaagttggtgtacgaccaaaaagaagttgatcatactacagaatatcatgatgactatctaatttttttaaatagagactgcaactcatatttgttataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

422

Amino Acids

47.88

Weight (kDa)

9.22

Isoelectric Point (pI)

60.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1267
AccII CGCG 2 cut(s) 341, 346
AciI CCGC 4 cut(s) 72, 341, 649, 1054
AclWI GGATC 3 cut(s) 195, 208, 249
AcoI YGGCCR 2 cut(s) 119, 250
AcsI RAATTY 2 cut(s) 701, 883
AfaI GTAC 4 cut(s) 592, 945, 1067, 1181
AfiI CCNNNNNNNGG 4 cut(s) 25, 74, 279, 961
AgsI TTSAA 4 cut(s) 296, 433, 706, 1171
AjnI CCWGG 4 cut(s) 5, 278, 416, 982
AjuI GAANNNNNNNTTGG 2 cut(s) 792, 824
AluBI AGCT 9 cut(s) 99, 408, 478, 624, 667, 762, 854, 996, 1124
AluI AGCT 9 cut(s) 99, 408, 478, 624, 667, 762, 854, 996, 1124
Alw21I GWGCWC 2 cut(s) 626, 669
Alw26I GTCTC 3 cut(s) 129, 981, 1239
AlwI GGATC 3 cut(s) 195, 208, 249
Ama87I CYCGRG 1 cut(s) 479
AoxI GGCC 6 cut(s) 8, 27, 119, 245, 250, 281
ApeKI GCWGC 3 cut(s) 78, 938, 1121
ApoI RAATTY 2 cut(s) 701, 883
ArsI GACNNNNNNTTYG 2 cut(s) 493, 525
AspLEI GCGC 4 cut(s) 83, 346, 348, 1121
AspS9I GGNCC 2 cut(s) 9, 246
AsuC2I CCSGG 1 cut(s) 249
AsuHPI GGTGA 3 cut(s) 182, 257, 406
AvaI CYCGRG 1 cut(s) 479
BamHI GGATCC 1 cut(s) 200
BanII GRGCYC 3 cut(s) 626, 669, 799
BarI GAAGNNNNNNTAC 2 cut(s) 1163, 1195
Bbv12I GWGCWC 2 cut(s) 626, 669
BbvCI CCTCAGC 1 cut(s) 404
BbvI GCAGC 3 cut(s) 90, 950, 1133
BccI CCATC 3 cut(s) 27, 838, 955
BceAI ACGGC 6 cut(s) 106, 260, 268, 295, 926, 1084
BciT130I CCWGG 4 cut(s) 7, 280, 418, 984
BclI TGATCA 4 cut(s) 234, 735, 1147, 1198
BcnI CCSGG 1 cut(s) 249
BcoDI GTCTC 3 cut(s) 129, 981, 1239
BfaI CTAG 3 cut(s) 300, 792, 894
BfmI CTRYAG 3 cut(s) 459, 566, 1206
BfoI RGCGCY 1 cut(s) 84
BisI GCNGC 4 cut(s) 79, 342, 939, 1122
BlsI GCNGC 4 cut(s) 80, 343, 940, 1123
Bme1390I CCNGG 5 cut(s) 7, 249, 280, 418, 984
BmeT110I CYCGRG 1 cut(s) 479
BmgT120I GGNCC 2 cut(s) 9, 246
BmiI GGNNCC 1 cut(s) 202
BmrFI CCNGG 5 cut(s) 7, 249, 280, 418, 984
BmsI GCATC 2 cut(s) 332, 1122
BpmI CTGGAG 2 cut(s) 138, 1005
Bpu10I CCTNAGC 1 cut(s) 404
BpuEI CTTGAG 1 cut(s) 708
BpuMI CCSGG 1 cut(s) 249
BsaBI GATNNNNATC 2 cut(s) 225, 1224
BsaJI CCNNGG 2 cut(s) 5, 603
BsaXI ACNNNNNCTCC 2 cut(s) 22, 52
Bsc4I CCNNNNNNNGG 4 cut(s) 25, 74, 279, 961
Bse118I RCCGGY 1 cut(s) 74
Bse3DI GCAATG 1 cut(s) 1161
Bse8I GATNNNNATC 2 cut(s) 225, 1224
BseBI CCWGG 4 cut(s) 7, 280, 418, 984
BseDI CCNNGG 2 cut(s) 5, 603
BseGI GGATG 3 cut(s) 141, 645, 1150
BseJI GATNNNNATC 2 cut(s) 225, 1224
BseLI CCNNNNNNNGG 4 cut(s) 25, 74, 279, 961
BseMI GCAATG 1 cut(s) 1161
BseMII CTCAG 4 cut(s) 383, 418, 772, 971
BsePI GCGCGC 1 cut(s) 344
BseRI GAGGAG 1 cut(s) 572
BseX3I CGGCCG 1 cut(s) 250
BseXI GCAGC 3 cut(s) 90, 950, 1133
BseYI CCCAGC 1 cut(s) 258
BsgI GTGCAG 2 cut(s) 133, 997
Bsh1236I CGCG 2 cut(s) 341, 346
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 6 cut(s) 10, 29, 121, 247, 252, 283
BsiEI CGRYCG 1 cut(s) 253
BsiHKAI GWGCWC 2 cut(s) 626, 669
BsiHKCI CYCGRG 1 cut(s) 479
BsiSI CCGG 2 cut(s) 75, 249
BsiWI CGTACG 1 cut(s) 943
BslFI GGGAC 1 cut(s) 51
BslI CCNNNNNNNGG 4 cut(s) 25, 74, 279, 961
BsmAI GTCTC 3 cut(s) 129, 981, 1239
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 1 cut(s) 51
BsmI GAATGC 1 cut(s) 932
BsnI GGCC 6 cut(s) 10, 29, 121, 247, 252, 283
BsoBI CYCGRG 1 cut(s) 479
Bsp1286I GDGCHC 3 cut(s) 626, 669, 799
Bsp143I GATC 8 cut(s) 195, 200, 234, 239, 254, 735, 1147, 1198
BspACI CCGC 4 cut(s) 72, 341, 649, 1054
BspANI GGCC 6 cut(s) 10, 29, 121, 247, 252, 283
BspCNI CTCAG 4 cut(s) 384, 417, 771, 970
BspFNI CGCG 2 cut(s) 341, 346
BspHI TCATGA 2 cut(s) 1021, 1216
BspLI GGNNCC 1 cut(s) 202
BspMAI CTGCAG 1 cut(s) 463
BspPI GGATC 3 cut(s) 195, 208, 249
BsrDI GCAATG 1 cut(s) 1161
BsrFI RCCGGY 1 cut(s) 74
BssAI RCCGGY 1 cut(s) 74
BssECI CCNNGG 2 cut(s) 5, 603
BssHII GCGCGC 1 cut(s) 344
BssMI GATC 8 cut(s) 195, 200, 234, 239, 254, 735, 1147, 1198
BssT1I CCWWGG 1 cut(s) 603
Bst2UI CCWGG 4 cut(s) 7, 280, 418, 984
Bst4CI ACNGT 3 cut(s) 269, 1003, 1162
BstAPI GCANNNNNTGC 1 cut(s) 856
BstDEI CTNAG 6 cut(s) 392, 404, 598, 758, 957, 1072
BstF5I GGATG 3 cut(s) 141, 645, 1150
BstFNI CGCG 2 cut(s) 341, 346
BstH2I RGCGCY 1 cut(s) 84
BstHHI GCGC 4 cut(s) 83, 346, 348, 1121
BstKTI GATC 8 cut(s) 198, 203, 237, 242, 257, 738, 1150, 1201
BstMAI GTCTC 3 cut(s) 129, 981, 1239
BstMBI GATC 8 cut(s) 195, 200, 234, 239, 254, 735, 1147, 1198
BstMCI CGRYCG 1 cut(s) 253
BstMWI GCNNNNNNNGC 7 cut(s) 80, 89, 164, 289, 856, 1060, 1125
BstNI CCWGG 4 cut(s) 7, 280, 418, 984
BstNSI RCATGY 3 cut(s) 310, 616, 1063
BstSCI CCNGG 5 cut(s) 5, 247, 278, 416, 982
BstSFI CTRYAG 3 cut(s) 459, 566, 1206
BstUI CGCG 2 cut(s) 341, 346
BstV1I GCAGC 3 cut(s) 90, 950, 1133
BstX2I RGATCY 1 cut(s) 200
BstYI RGATCY 1 cut(s) 200
BstZI CGGCCG 1 cut(s) 250
BsuRI GGCC 6 cut(s) 10, 29, 121, 247, 252, 283
BtsCI GGATG 3 cut(s) 141, 645, 1150
BtsIMutI CAGTG 1 cut(s) 1167
CciI TCATGA 2 cut(s) 1021, 1216
CfoI GCGC 4 cut(s) 83, 346, 348, 1121
Cfr10I RCCGGY 1 cut(s) 74
Cfr13I GGNCC 2 cut(s) 9, 246
CsiI ACCWGGT 1 cut(s) 416
Csp6I GTAC 4 cut(s) 591, 944, 1066, 1180
CspCI CAANNNNNGTGG 2 cut(s) 1143, 1178
CviAII CATG 9 cut(s) 307, 377, 443, 512, 553, 613, 1022, 1060, 1217
CviQI GTAC 4 cut(s) 591, 944, 1066, 1180
DdeI CTNAG 6 cut(s) 392, 404, 598, 758, 957, 1072
DpnI GATC 8 cut(s) 197, 202, 236, 241, 256, 737, 1149, 1200
DpnII GATC 8 cut(s) 195, 200, 234, 239, 254, 735, 1147, 1198
DraI TTTAAA 1 cut(s) 1239
EaeI YGGCCR 2 cut(s) 119, 250
EagI CGGCCG 1 cut(s) 250
Ecl136II GAGCTC 2 cut(s) 624, 667
EclXI CGGCCG 1 cut(s) 250
Eco130I CCWWGG 1 cut(s) 603
Eco24I GRGCYC 3 cut(s) 626, 669, 799
Eco52I CGGCCG 1 cut(s) 250
Eco53kI GAGCTC 2 cut(s) 624, 667
Eco88I CYCGRG 1 cut(s) 479
EcoICRI GAGCTC 2 cut(s) 624, 667
EcoRI GAATTC 1 cut(s) 701
EcoRII CCWGG 4 cut(s) 5, 278, 416, 982
EcoT14I CCWWGG 1 cut(s) 603
EcoT22I ATGCAT 1 cut(s) 932
EcoT38I GRGCYC 3 cut(s) 626, 669, 799
ErhI CCWWGG 1 cut(s) 603
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 9 cut(s) 310, 380, 446, 515, 556, 616, 1025, 1063, 1220
FaqI GGGAC 1 cut(s) 51
FatI CATG 9 cut(s) 306, 376, 442, 511, 552, 612, 1021, 1059, 1216
FauI CCCGC 1 cut(s) 1047
FbaI TGATCA 4 cut(s) 234, 735, 1147, 1198
Fnu4HI GCNGC 4 cut(s) 79, 342, 939, 1122
FokI GGATG 3 cut(s) 128, 632, 1157
FriOI GRGCYC 3 cut(s) 626, 669, 799
Fsp4HI GCNGC 4 cut(s) 79, 342, 939, 1122
FspBI CTAG 3 cut(s) 300, 792, 894
GlaI GCGC 4 cut(s) 82, 345, 347, 1120
GluI GCNGC 4 cut(s) 79, 342, 939, 1122
GsaI CCCAGC 1 cut(s) 262
GsuI CTGGAG 2 cut(s) 138, 1005
HaeII RGCGCY 1 cut(s) 84
HaeIII GGCC 6 cut(s) 10, 29, 121, 247, 252, 283
HapII CCGG 2 cut(s) 75, 249
HhaI GCGC 4 cut(s) 83, 346, 348, 1121
Hin1II CATG 9 cut(s) 310, 380, 446, 515, 556, 616, 1025, 1063, 1220
Hin6I GCGC 4 cut(s) 81, 344, 346, 1119
HinP1I GCGC 4 cut(s) 81, 344, 346, 1119
HindIII AAGCTT 1 cut(s) 852
HinfI GANTC 6 cut(s) 226, 562, 684, 756, 910, 1018
HpaII CCGG 2 cut(s) 75, 249
HphI GGTGA 3 cut(s) 182, 257, 406
Hpy166II GTNNAC 6 cut(s) 414, 593, 658, 1043, 1101, 1180
Hpy188I TCNGA 8 cut(s) 200, 234, 239, 316, 689, 786, 925, 960
Hpy188III TCNNGA 6 cut(s) 23, 481, 713, 792, 1022, 1217
Hpy8I GTNNAC 6 cut(s) 414, 593, 658, 1043, 1101, 1180
Hpy99I CGWCG 1 cut(s) 66
HpyAV CCTTC 5 cut(s) 51, 439, 822, 826, 859
HpyCH4III ACNGT 3 cut(s) 269, 1003, 1162
HpyCH4IV ACGT 1 cut(s) 946
HpyCH4V TGCA 9 cut(s) 52, 113, 150, 461, 489, 612, 930, 978, 1251
HpyF10VI GCNNNNNNNGC 7 cut(s) 80, 89, 164, 289, 856, 1060, 1125
HpyF3I CTNAG 6 cut(s) 392, 404, 598, 758, 957, 1072
HpySE526I ACGT 1 cut(s) 946
Hsp92II CATG 9 cut(s) 310, 380, 446, 515, 556, 616, 1025, 1063, 1220
HspAI GCGC 4 cut(s) 81, 344, 346, 1119
KroI GCCGGC 1 cut(s) 74
KroNI GCCGGC 1 cut(s) 76
Ksp22I TGATCA 4 cut(s) 234, 735, 1147, 1198
Kzo9I GATC 8 cut(s) 195, 200, 234, 239, 254, 735, 1147, 1198
LmnI GCTCC 4 cut(s) 621, 664, 672, 1133
Lsp1109I GCAGC 3 cut(s) 90, 950, 1133
LweI GCATC 2 cut(s) 332, 1122
MabI ACCWGGT 1 cut(s) 416
MaeI CTAG 3 cut(s) 300, 792, 894
MaeII ACGT 1 cut(s) 946
MaeIII GTNAC 1 cut(s) 889
MalI GATC 8 cut(s) 197, 202, 236, 241, 256, 737, 1149, 1200
MboI GATC 8 cut(s) 195, 200, 234, 239, 254, 735, 1147, 1198
MboII GAAGA 1 cut(s) 221
MflI RGATCY 1 cut(s) 200
MhlI GDGCHC 3 cut(s) 626, 669, 799
MluCI AATT 8 cut(s) 437, 501, 582, 701, 883, 965, 1166, 1230
MlyI GAGTC 2 cut(s) 750, 919
Mph1103I ATGCAT 1 cut(s) 932
MroNI GCCGGC 1 cut(s) 74
MseI TTAA 4 cut(s) 387, 581, 1133, 1238
MspA1I CMGCKG 1 cut(s) 408
MspI CCGG 2 cut(s) 75, 249
MspR9I CCNGG 5 cut(s) 7, 249, 280, 418, 984
Mva1269I GAATGC 1 cut(s) 932
MvaI CCWGG 4 cut(s) 7, 280, 418, 984
MvnI CGCG 2 cut(s) 341, 346
MwoI GCNNNNNNNGC 7 cut(s) 80, 89, 164, 289, 856, 1060, 1125
NaeI GCCGGC 1 cut(s) 76
NciI CCSGG 1 cut(s) 249
NdeII GATC 8 cut(s) 195, 200, 234, 239, 254, 735, 1147, 1198
NgoMIV GCCGGC 1 cut(s) 74
NlaIII CATG 9 cut(s) 310, 380, 446, 515, 556, 616, 1025, 1063, 1220
NlaIV GGNNCC 1 cut(s) 202
NmeAIII GCCGAG 1 cut(s) 904
NsiI ATGCAT 1 cut(s) 932
NspI RCATGY 3 cut(s) 310, 616, 1063
PaeI GCATGC 2 cut(s) 310, 1063
PaeR7I CTCGAG 1 cut(s) 479
PagI TCATGA 2 cut(s) 1021, 1216
PauI GCGCGC 1 cut(s) 344
PcsI WCGNNNNNNNCGW 2 cut(s) 204, 250
PctI GAATGC 1 cut(s) 932
PdiI GCCGGC 1 cut(s) 76
PfeI GAWTC 4 cut(s) 226, 562, 684, 1018
Pfl23II CGTACG 1 cut(s) 943
PkrI GCNGC 4 cut(s) 80, 343, 940, 1123
PleI GAGTC 2 cut(s) 750, 918
PpsI GAGTC 2 cut(s) 750, 918
PsiI TTATAA 1 cut(s) 1267
Psp124BI GAGCTC 2 cut(s) 626, 669
Psp6I CCWGG 4 cut(s) 5, 278, 416, 982
PspFI CCCAGC 1 cut(s) 258
PspGI CCWGG 4 cut(s) 5, 278, 416, 982
PspLI CGTACG 1 cut(s) 943
PspN4I GGNNCC 1 cut(s) 202
PspPI GGNCC 2 cut(s) 9, 246
PstI CTGCAG 1 cut(s) 463
PsuI RGATCY 1 cut(s) 200
PteI GCGCGC 1 cut(s) 344
PvuII CAGCTG 1 cut(s) 408
RsaI GTAC 4 cut(s) 592, 945, 1067, 1181
RsaNI GTAC 4 cut(s) 591, 944, 1066, 1180
SacI GAGCTC 2 cut(s) 626, 669
SaqAI TTAA 4 cut(s) 387, 581, 1133, 1238
SatI GCNGC 4 cut(s) 79, 342, 939, 1122
Sau3AI GATC 8 cut(s) 195, 200, 234, 239, 254, 735, 1147, 1198
Sau96I GGNCC 2 cut(s) 9, 246
SchI GAGTC 2 cut(s) 750, 919
ScrFI CCNGG 5 cut(s) 7, 249, 280, 418, 984
SduI GDGCHC 3 cut(s) 626, 669, 799
SexAI ACCWGGT 1 cut(s) 416
SfaNI GCATC 2 cut(s) 332, 1122
SfcI CTRYAG 3 cut(s) 459, 566, 1206
Sfr274I CTCGAG 1 cut(s) 479
SlaI CTCGAG 1 cut(s) 479
SmlI CTYRAG 2 cut(s) 479, 723
SmoI CTYRAG 2 cut(s) 479, 723
SphI GCATGC 2 cut(s) 310, 1063
Sse9I AATT 8 cut(s) 437, 501, 582, 701, 883, 965, 1166, 1230
SsiI CCGC 4 cut(s) 72, 341, 649, 1054
SspMI CTAG 3 cut(s) 300, 792, 894
SstI GAGCTC 2 cut(s) 626, 669
StyD4I CCNGG 5 cut(s) 5, 247, 278, 416, 982
StyI CCWWGG 1 cut(s) 603
TaaI ACNGT 3 cut(s) 269, 1003, 1162
TaiI ACGT 1 cut(s) 949
TaqI TCGA 6 cut(s) 371, 480, 712, 819, 908, 951
TasI AATT 8 cut(s) 437, 501, 582, 701, 883, 965, 1166, 1230
TauI GCSGC 1 cut(s) 344
TfiI GAWTC 4 cut(s) 226, 562, 684, 1018
Tru1I TTAA 4 cut(s) 387, 581, 1133, 1238
Tru9I TTAA 4 cut(s) 387, 581, 1133, 1238
TscAI CASTG 1 cut(s) 1167
TseI GCWGC 3 cut(s) 78, 938, 1121
TspDTI ATGAA 1 cut(s) 459
TspGWI ACGGA 2 cut(s) 324, 877
TspRI CASTG 1 cut(s) 1167
XapI RAATTY 2 cut(s) 701, 883
XbaI TCTAGA 1 cut(s) 791
XceI RCATGY 3 cut(s) 310, 616, 1063
XhoI CTCGAG 1 cut(s) 479
XspI CTAG 3 cut(s) 300, 792, 894
Zsp2I ATGCAT 1 cut(s) 932
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.