Rroxscaffold_7G00205990

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000144
Physical Location & Seq
Reverse (-)
55647170 .. 55648609
1440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00205990.1

Sequence Viewer

Length: 1440 bp
ATGGTCATGCTCTCTATATATTTGTCTTACAGTAACCTGGGAAACTACCTCAGCTGGTTCACCAGGTCTGTTTCCTTCAAGCAATTACATGAACACAAAATATCTGCAGGCAAGAGAAAACAACTCGAGAACTGCAACGACAACCAAATTACTTGTCATGGGTCAGTCGGGTGCTGGCAGACACCACCACAAGACATCATGGAGGAGATTCTACAGAAAATGGGTTTAATTGCTCGTGCACGCTTAGCCAAGGTCTGCATGTCTTGGAGCTCACTTGTTATGAGAGCTGACATCCGCAGTGCTCCGCAACTGCCATGGTTAGTACACCCTCAAACCCCAAACACCAACTACTTAACCTTTTCCAGCCTCTCTGAGGGTGAAGTTGTGAACCTGGAGCTCCCAAACCCAAAGCGATTCAGAGGACAAGGCGAATTCAAGTTTCGAGCGGCTTCTCAAGGTTGGTTGATCATTTTACAAGAAAAAGGACTCAGCTTTGATATGTTCCTATACAATCCGATTTCCAGAGCCCAACACCAACTTCCTTCCTTCGACACTATTCCATTTTTCCAATCTTACCAGCAAGCTTCGCTACGGAAGGGTCATAATGCCGAGAATTTTGTAACTAAAGTTGTGTTGTCTAGTCCAAACATCTCCGAATGCATTGTGGCAGCCGTTTTCGGCCCTCAGAAGGAATTGGGTTTGTGCAGACCTGGAGACAAAATCTGGACTGTTTTTGAGATACTGAATCATGATGAGAACGACTTTCTCATAGATTTACTTTTTTCGCGGGGCATGCTATACGGCTTAGTTGATATTTCTTGTAATAACAAGTCCACCAAAAATGGCATCGGCGCAGCTCGCTCCTTAAACTTTGGAGATGATCAGGCAATGACAGTGGAATTGAAGTTGGTGTACGACCATAAAGAAGTTGGTCATACTACAGAGTATCATGATGACTATCTAATTTTTTTAAATAGAGGCTGCAACTCATATTTGTTAGAATTAACAACAATTAGCGATAAGGAAATCTTGTTGATCCATCAAATGCTCGATTGTTTAATGCTCAACTGTGTTGATGATAATGAGTGGGAAATCGAATATCAGAGGACAAGAGGGTTTATAGTATACAAGATTGACCTCGAGTGTGGCAACTTTCGTGAGGTACAAAATTTGGGGGACCAAATAATATTCTTGGCAGAGCATAGCTCTTCCTTGTCCTTTCCAGCAAGTGATTTCAAACTACAAGGAAATTGCATTTATTTCGCAACAAGCGGATATGCAGCTATCCGCCTGCCTCGTAAGACACCTCTTGGACCAAATATATCTCGTGAAATCGGAATCTTTAGTTTAGATGACGGAAAAGTTAAGCGACCCTTTCCAAGTCTTGATTTTATTGGCTATTCACCTTGTCAACTGAGTTGGTTCAGTCCGAGTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

479

Amino Acids

54.49

Weight (kDa)

6.08

Isoelectric Point (pI)

40.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 121 - 448 1.9e-35 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 446
AccI GTMKAC 1 cut(s) 1125
AccII CGCG 1 cut(s) 787
AciI CCGC 6 cut(s) 295, 305, 446, 787, 1272, 1288
AclWI GGATC 1 cut(s) 1030
AcsI RAATTY 3 cut(s) 431, 613, 1168
AfaI GTAC 3 cut(s) 324, 914, 1164
AfiI CCNNNNNNNGG 2 cut(s) 373, 688
AgsI TTSAA 4 cut(s) 79, 436, 904, 1237
AjnI CCWGG 4 cut(s) 36, 62, 390, 709
AjuI GAANNNNNNNTTGG 2 cut(s) 522, 554
AluBI AGCT 9 cut(s) 54, 270, 287, 397, 492, 584, 857, 1206, 1283
AluI AGCT 9 cut(s) 54, 270, 287, 397, 492, 584, 857, 1206, 1283
Alw21I GWGCWC 4 cut(s) 241, 272, 304, 399
Alw26I GTCTC 1 cut(s) 708
Alw44I GTGCAC 1 cut(s) 237
AlwI GGATC 1 cut(s) 1030
Ama87I CYCGRG 2 cut(s) 125, 1139
AoxI GGCC 1 cut(s) 679
ApaLI GTGCAC 1 cut(s) 237
ApeKI GCWGC 4 cut(s) 668, 854, 981, 1280
ApoI RAATTY 3 cut(s) 431, 613, 1168
ArsI GACNNNNNNTTYG 2 cut(s) 139, 171
AspLEI GCGC 1 cut(s) 854
AspS9I GGNCC 3 cut(s) 680, 1177, 1313
AsuHPI GGTGA 3 cut(s) 52, 389, 1395
AvaI CYCGRG 2 cut(s) 125, 1139
AvaII GGWCC 2 cut(s) 1177, 1313
BaeGI GKGCMC 1 cut(s) 241
BanII GRGCYC 3 cut(s) 272, 399, 529
BarI GAAGNNNNNNTAC 2 cut(s) 896, 928
BauI CACGAG 2 cut(s) 234, 1326
Bbv12I GWGCWC 4 cut(s) 241, 272, 304, 399
BbvCI CCTCAGC 1 cut(s) 50
BbvI GCAGC 4 cut(s) 680, 866, 968, 1292
BccI CCATC 1 cut(s) 1047
BceAI ACGGC 2 cut(s) 656, 817
BcgI CGANNNNNNTGC 2 cut(s) 1243, 1277
BciT130I CCWGG 4 cut(s) 38, 64, 392, 711
BclI TGATCA 2 cut(s) 465, 880
BcoDI GTCTC 1 cut(s) 708
BfaI CTAG 1 cut(s) 639
BfmI CTRYAG 3 cut(s) 105, 212, 939
BisI GCNGC 5 cut(s) 447, 669, 855, 982, 1281
BlpI GCTNAGC 1 cut(s) 244
BlsI GCNGC 5 cut(s) 448, 670, 856, 983, 1282
Bme1390I CCNGG 4 cut(s) 38, 64, 392, 711
Bme18I GGWCC 2 cut(s) 1177, 1313
BmeT110I CYCGRG 2 cut(s) 125, 1139
BmgT120I GGNCC 3 cut(s) 680, 1177, 1313
BmiI GGNNCC 1 cut(s) 1178
BmrFI CCNGG 4 cut(s) 38, 64, 392, 711
BmsI GCATC 1 cut(s) 855
BplI GAGNNNNNCTC 2 cut(s) 1190, 1222
BpmI CTGGAG 2 cut(s) 413, 732
Bpu10I CCTNAGC 1 cut(s) 50
Bpu1102I GCTNAGC 1 cut(s) 244
BpuEI CTTGAG 1 cut(s) 438
BsaBI GATNNNNATC 1 cut(s) 957
BsaJI CCNNGG 3 cut(s) 37, 249, 314
Bsc4I CCNNNNNNNGG 2 cut(s) 373, 688
Bse3DI GCAATG 1 cut(s) 894
Bse8I GATNNNNATC 1 cut(s) 957
BseBI CCWGG 4 cut(s) 38, 64, 392, 711
BseDI CCNNGG 3 cut(s) 37, 249, 314
BseGI GGATG 1 cut(s) 291
BseJI GATNNNNATC 1 cut(s) 957
BseLI CCNNNNNNNGG 2 cut(s) 373, 688
BseMI GCAATG 1 cut(s) 894
BseMII CTCAG 5 cut(s) 64, 363, 502, 698, 1406
BseRI GAGGAG 1 cut(s) 218
BseSI GKGCMC 1 cut(s) 241
BseXI GCAGC 4 cut(s) 680, 866, 968, 1292
BsgI GTGCAG 1 cut(s) 724
Bsh1236I CGCG 1 cut(s) 787
BshFI GGCC 1 cut(s) 681
BsiHKAI GWGCWC 4 cut(s) 241, 272, 304, 399
BsiHKCI CYCGRG 2 cut(s) 125, 1139
BslFI GGGAC 1 cut(s) 1190
BslI CCNNNNNNNGG 2 cut(s) 373, 688
BsmAI GTCTC 1 cut(s) 708
BsmFI GGGAC 1 cut(s) 1190
BsmI GAATGC 1 cut(s) 662
BsnI GGCC 1 cut(s) 681
BsoBI CYCGRG 2 cut(s) 125, 1139
Bsp1286I GDGCHC 5 cut(s) 241, 272, 304, 399, 529
Bsp143I GATC 3 cut(s) 465, 880, 1035
Bsp1720I GCTNAGC 1 cut(s) 244
Bsp19I CCATGG 1 cut(s) 314
BspACI CCGC 6 cut(s) 295, 305, 446, 787, 1272, 1288
BspANI GGCC 1 cut(s) 681
BspCNI CTCAG 5 cut(s) 63, 364, 501, 697, 1407
BspFNI CGCG 1 cut(s) 787
BspHI TCATGA 2 cut(s) 748, 949
BspLI GGNNCC 1 cut(s) 1178
BspMAI CTGCAG 1 cut(s) 109
BspPI GGATC 1 cut(s) 1030
BspQI GCTCTTC 1 cut(s) 1213
BsrBI CCGCTC 1 cut(s) 446
BsrDI GCAATG 1 cut(s) 894
BssECI CCNNGG 3 cut(s) 37, 249, 314
BssMI GATC 3 cut(s) 465, 880, 1035
BssNAI GTATAC 1 cut(s) 1126
BssSI CACGAG 2 cut(s) 234, 1326
BssT1I CCWWGG 2 cut(s) 249, 314
Bst1107I GTATAC 1 cut(s) 1126
Bst2BI CACGAG 2 cut(s) 234, 1326
Bst2UI CCWGG 4 cut(s) 38, 64, 392, 711
Bst4CI ACNGT 4 cut(s) 32, 730, 895, 1070
Bst6I CTCTTC 1 cut(s) 1213
BstC8I GCNNGC 7 cut(s) 109, 176, 241, 582, 794, 859, 1292
BstDEI CTNAG 7 cut(s) 50, 244, 372, 488, 684, 805, 1415
BstDSI CCRYGG 1 cut(s) 314
BstENI CCTNNNNNAGG 1 cut(s) 371
BstF5I GGATG 1 cut(s) 291
BstFNI CGCG 1 cut(s) 787
BstHHI GCGC 1 cut(s) 854
BstKTI GATC 3 cut(s) 468, 883, 1038
BstMAI GTCTC 1 cut(s) 708
BstMBI GATC 3 cut(s) 465, 880, 1035
BstMWI GCNNNNNNNGC 4 cut(s) 245, 586, 793, 858
BstNI CCWGG 4 cut(s) 38, 64, 392, 711
BstNSI RCATGY 2 cut(s) 262, 796
BstSCI CCNGG 4 cut(s) 36, 62, 390, 709
BstSFI CTRYAG 3 cut(s) 105, 212, 939
BstSLI GKGCMC 1 cut(s) 241
BstUI CGCG 1 cut(s) 787
BstV1I GCAGC 4 cut(s) 680, 866, 968, 1292
BstZ17I GTATAC 1 cut(s) 1126
BsuRI GGCC 1 cut(s) 681
BtgI CCRYGG 1 cut(s) 314
BtsCI GGATG 1 cut(s) 291
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 2 cut(s) 304, 900
Cac8I GCNNGC 7 cut(s) 109, 176, 241, 582, 794, 859, 1292
CciI TCATGA 2 cut(s) 748, 949
CfoI GCGC 1 cut(s) 854
Cfr13I GGNCC 3 cut(s) 680, 1177, 1313
CsiI ACCWGGT 1 cut(s) 62
Csp6I GTAC 3 cut(s) 323, 913, 1163
CspCI CAANNNNNGTGG 2 cut(s) 876, 911
CviAII CATG 9 cut(s) 7, 89, 158, 199, 259, 315, 749, 793, 950
CviQI GTAC 3 cut(s) 323, 913, 1163
DdeI CTNAG 7 cut(s) 50, 244, 372, 488, 684, 805, 1415
DpnI GATC 3 cut(s) 467, 882, 1037
DpnII GATC 3 cut(s) 465, 880, 1035
DraI TTTAAA 1 cut(s) 972
Eam1104I CTCTTC 1 cut(s) 1213
EarI CTCTTC 1 cut(s) 1213
EciI GGCGGA 1 cut(s) 1277
Ecl136II GAGCTC 2 cut(s) 270, 397
Eco130I CCWWGG 2 cut(s) 249, 314
Eco24I GRGCYC 3 cut(s) 272, 399, 529
Eco47I GGWCC 2 cut(s) 1177, 1313
Eco53kI GAGCTC 2 cut(s) 270, 397
Eco88I CYCGRG 2 cut(s) 125, 1139
EcoICRI GAGCTC 2 cut(s) 270, 397
EcoNI CCTNNNNNAGG 1 cut(s) 371
EcoRI GAATTC 1 cut(s) 431
EcoRII CCWGG 4 cut(s) 36, 62, 390, 709
EcoT14I CCWWGG 2 cut(s) 249, 314
EcoT22I ATGCAT 1 cut(s) 662
EcoT38I GRGCYC 3 cut(s) 272, 399, 529
ErhI CCWWGG 2 cut(s) 249, 314
FaeI CATG 9 cut(s) 10, 92, 161, 202, 262, 318, 752, 796, 953
FalI AAGNNNNNCTT 4 cut(s) 1013, 1045, 1358, 1390
FaqI GGGAC 1 cut(s) 1190
FatI CATG 9 cut(s) 6, 88, 157, 198, 258, 314, 748, 792, 949
FauI CCCGC 1 cut(s) 780
FbaI TGATCA 2 cut(s) 465, 880
FblI GTMKAC 1 cut(s) 1125
Fnu4HI GCNGC 5 cut(s) 447, 669, 855, 982, 1281
FokI GGATG 1 cut(s) 278
FriOI GRGCYC 3 cut(s) 272, 399, 529
Fsp4HI GCNGC 5 cut(s) 447, 669, 855, 982, 1281
FspBI CTAG 1 cut(s) 639
GlaI GCGC 1 cut(s) 853
GluI GCNGC 5 cut(s) 447, 669, 855, 982, 1281
GsuI CTGGAG 2 cut(s) 413, 732
HaeIII GGCC 1 cut(s) 681
HhaI GCGC 1 cut(s) 854
Hin1II CATG 9 cut(s) 10, 92, 161, 202, 262, 318, 752, 796, 953
Hin6I GCGC 1 cut(s) 852
HinP1I GCGC 1 cut(s) 852
HincII GTYRAC 1 cut(s) 1412
HindII GTYRAC 1 cut(s) 1412
HindIII AAGCTT 1 cut(s) 582
HinfI GANTC 6 cut(s) 208, 414, 486, 745, 1338, 1432
HphI GGTGA 3 cut(s) 52, 389, 1395
Hpy166II GTNNAC 8 cut(s) 60, 239, 325, 388, 834, 913, 1126, 1412
Hpy188I TCNGA 8 cut(s) 373, 419, 516, 655, 687, 1104, 1337, 1431
Hpy188III TCNNGA 8 cut(s) 127, 522, 724, 749, 950, 1157, 1328, 1385
Hpy8I GTNNAC 8 cut(s) 60, 239, 325, 388, 834, 913, 1126, 1412
HpyAV CCTTC 5 cut(s) 85, 552, 556, 589, 682
HpyCH4III ACNGT 4 cut(s) 32, 730, 895, 1070
HpyCH4V TGCA 9 cut(s) 107, 135, 239, 258, 660, 705, 984, 1254, 1280
HpyF10VI GCNNNNNNNGC 4 cut(s) 245, 586, 793, 858
HpyF3I CTNAG 7 cut(s) 50, 244, 372, 488, 684, 805, 1415
Hsp92II CATG 9 cut(s) 10, 92, 161, 202, 262, 318, 752, 796, 953
HspAI GCGC 1 cut(s) 852
Ksp22I TGATCA 2 cut(s) 465, 880
Kzo9I GATC 3 cut(s) 465, 880, 1035
LguI GCTCTTC 1 cut(s) 1213
LmnI GCTCC 5 cut(s) 267, 307, 394, 402, 866
Lsp1109I GCAGC 4 cut(s) 680, 866, 968, 1292
LweI GCATC 1 cut(s) 855
MabI ACCWGGT 1 cut(s) 62
MaeI CTAG 1 cut(s) 639
MaeIII GTNAC 2 cut(s) 32, 619
MalI GATC 3 cut(s) 467, 882, 1037
MbiI CCGCTC 1 cut(s) 446
MboI GATC 3 cut(s) 465, 880, 1035
MboII GAAGA 1 cut(s) 1200
MhlI GDGCHC 5 cut(s) 241, 272, 304, 399, 529
MlyI GAGTC 1 cut(s) 480
Mph1103I ATGCAT 1 cut(s) 662
MseI TTAA 7 cut(s) 227, 353, 866, 971, 1004, 1058, 1365
MspA1I CMGCKG 1 cut(s) 54
MspR9I CCNGG 4 cut(s) 38, 64, 392, 711
Mva1269I GAATGC 1 cut(s) 662
MvaI CCWGG 4 cut(s) 38, 64, 392, 711
MvnI CGCG 1 cut(s) 787
MwoI GCNNNNNNNGC 4 cut(s) 245, 586, 793, 858
NcoI CCATGG 1 cut(s) 314
NdeII GATC 3 cut(s) 465, 880, 1035
NlaIII CATG 9 cut(s) 10, 92, 161, 202, 262, 318, 752, 796, 953
NlaIV GGNNCC 1 cut(s) 1178
NmeAIII GCCGAG 1 cut(s) 634
NsiI ATGCAT 1 cut(s) 662
NspI RCATGY 2 cut(s) 262, 796
PaeI GCATGC 1 cut(s) 796
PaeR7I CTCGAG 2 cut(s) 125, 1139
PagI TCATGA 2 cut(s) 748, 949
PciSI GCTCTTC 1 cut(s) 1213
PctI GAATGC 1 cut(s) 662
PfeI GAWTC 4 cut(s) 208, 414, 745, 1338
PkrI GCNGC 5 cut(s) 448, 670, 856, 983, 1282
PleI GAGTC 1 cut(s) 480
PpsI GAGTC 1 cut(s) 480
Psp124BI GAGCTC 2 cut(s) 272, 399
Psp6I CCWGG 4 cut(s) 36, 62, 390, 709
PspGI CCWGG 4 cut(s) 36, 62, 390, 709
PspN4I GGNNCC 1 cut(s) 1178
PspPI GGNCC 3 cut(s) 680, 1177, 1313
PspXI VCTCGAGB 1 cut(s) 1139
PstI CTGCAG 1 cut(s) 109
PvuII CAGCTG 1 cut(s) 54
RsaI GTAC 3 cut(s) 324, 914, 1164
RsaNI GTAC 3 cut(s) 323, 913, 1163
SacI GAGCTC 2 cut(s) 272, 399
SapI GCTCTTC 1 cut(s) 1213
SaqAI TTAA 7 cut(s) 227, 353, 866, 971, 1004, 1058, 1365
SatI GCNGC 5 cut(s) 447, 669, 855, 982, 1281
Sau3AI GATC 3 cut(s) 465, 880, 1035
Sau96I GGNCC 3 cut(s) 680, 1177, 1313
SchI GAGTC 1 cut(s) 480
ScrFI CCNGG 4 cut(s) 38, 64, 392, 711
SduI GDGCHC 5 cut(s) 241, 272, 304, 399, 529
SexAI ACCWGGT 1 cut(s) 62
SfaNI GCATC 1 cut(s) 855
SfcI CTRYAG 3 cut(s) 105, 212, 939
Sfr274I CTCGAG 2 cut(s) 125, 1139
SinI GGWCC 2 cut(s) 1177, 1313
SlaI CTCGAG 2 cut(s) 125, 1139
SmlI CTYRAG 3 cut(s) 125, 453, 1139
SmoI CTYRAG 3 cut(s) 125, 453, 1139
SphI GCATGC 1 cut(s) 796
SsiI CCGC 6 cut(s) 295, 305, 446, 787, 1272, 1288
SspI AATATT 1 cut(s) 1188
SspMI CTAG 1 cut(s) 639
SstI GAGCTC 2 cut(s) 272, 399
StyD4I CCNGG 4 cut(s) 36, 62, 390, 709
StyI CCWWGG 2 cut(s) 249, 314
TaaI ACNGT 4 cut(s) 32, 730, 895, 1070
TaqI TCGA 6 cut(s) 126, 442, 549, 1050, 1095, 1140
TatI WGTACW 1 cut(s) 322
TauI GCSGC 1 cut(s) 449
TfiI GAWTC 4 cut(s) 208, 414, 745, 1338
Tru1I TTAA 7 cut(s) 227, 353, 866, 971, 1004, 1058, 1365
Tru9I TTAA 7 cut(s) 227, 353, 866, 971, 1004, 1058, 1365
TscAI CASTG 2 cut(s) 304, 900
TseI GCWGC 4 cut(s) 668, 854, 981, 1280
TspDTI ATGAA 1 cut(s) 105
TspGWI ACGGA 2 cut(s) 607, 1371
TspRI CASTG 2 cut(s) 304, 900
VneI GTGCAC 1 cut(s) 237
VpaK11BI GGWCC 2 cut(s) 1177, 1313
XagI CCTNNNNNAGG 1 cut(s) 371
XapI RAATTY 3 cut(s) 431, 613, 1168
XceI RCATGY 2 cut(s) 262, 796
XcmI CCANNNNNNNNNTGG 1 cut(s) 926
XhoI CTCGAG 2 cut(s) 125, 1139
XmiI GTMKAC 1 cut(s) 1125
XspI CTAG 1 cut(s) 639
Zsp2I ATGCAT 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.