Rroxscaffold_7G00210640

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000144
Physical Location & Seq
Reverse (-)
61138963 .. 61149678
10716 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00210640.1

Sequence Viewer

Length: 1950 bp
ATGACTATGGTTGACAAATCCGATCGGGGCTACGGCTCACAGAAACCAGGCCATTGGCAATCTCTCCAAGTCAAGACTGAAAGCAGGTCGATCGCCGTTCTACTTCTTCATAACGTTTCTAAAGAAGTAGGGTTCATAGTAGCTCGATTTCTGCCGAAAAGGAGATCGATGATGATCGAGTCTCTATTCGCTTGCTTCAATCCTCGATGCAATACGAGCAAGCTTAGGCTGCTAAAGAGAAAAAAACTCCCAAAGAAATTAGAGAGAGAGCAGAAGGAGAATGAAGATGATAAGTACAGAAACCAAACCAGTTCTAATGAATGTACCTCTTGGCAGCCACCACCTCCTGATATCATGGAGCAAGTTCTGCCGCGTGTCAGAGTTAGTGATCAAATAAGGCTAAGCATTGCCTGCAAGTCTTGGATGTCAATCGTTATGCGTAGAGACATCAGCAGTGCTTCTCATGAATTCCCATGGTTACTACTCCCTCAAACCCCACATTGCAGCAACAAGTACGTAAGCTTTGCCAGCGTGTCAGAGGGGAGAGTTGTCAAGTTGAAGCTACCTAAGCAAGTTCGTGGATGGTGGATTTATGGGTCTTCTAAAGGTTGGTTGATCATGATCAAGGAAAGAGGTCTAAATTCCAAGATGTGTCTACTTAACCCAATTTCAGGAGCCCTACTCCAACTTCCACCCTTGAGAACACTTCCTTCTCTGAAAGATTTTGTGAAAACCGAGGACTGGAAACTTTTTGGTGCCAATGCATTCGACTTAAGGATTGCACTATCAGCCTCTGATGGAATTGCTTTAGAATCAAAGCGTTGTACGGTAGCAGCAGTTTTTAATGATAAGTCGAAATTGAGTTGGTGCAGACCTGGAGACAGAACATGGAGTGACTTTCAAGTATTAGATACTAATCAAAACGACTCGATTGCTGATTTATTGTTTTCTTCCGGCAGTCTATATGTTTTGGTTCGTAGTAGTCAAAAGGAAAGCTTTGTAGACTCAGTTACTCAAACCTTGAACTTTGGTTTTGGAGATGCAGAAAATTTGAAAATGAAGTTGATCTACGACAAGCATGAAAACAGGAACCTGAACGTTAATGAATGTCATAGTGACTATAAGATCGTTTACAATGCATTATACTTCTCAAGATTGTTAGAATCAACCAGCAATGAAGTCTTATTGATCCATCAAATGGTAGATTATGTTGTGGGAAGAAGAGAGGATATTGTTGGTGACAATAATGAGAATAATGGAGGCGGCAATATGGAGAATGATGATGGTGAGCAACACATTCATCATGATAATGACGACGGAAATCTTGAGGTTGATGGGGTAGACATCGATCAGAATGATGAGGATGATGATGAAGCCAACAACTTAGAAGATATTGATCAGCAAAATGGAGGAAACATTATTTATGGTGATGAAGGCAGTAATGAGAATGATGGTGGCGACAGCAATATGGAAAATGATGATGGTGGTGAAGGCCATAACGACAATAATGATGTTGATGTGGGAGACATTAATCAGAATCCTGAAGGTGATGAGGAAGACAACAATAACCCAGAAGATAATGGTCAGCAAGGAGAAACTATTGATGAAGATGCACCGGGATTTAATGCATATATGACAACAATGAGTTTTAGAGTATACAAGACTGACGACGACAACTTTATTCCATTGCAATGCTTGGGGGATCAATTATTCTTTCTTGGAGATTGTGGTTCCTTCTCCTTTGGAGTCAGTAATATGAAAAAATCAGAAAGGAATTGTATTTATTTTGCATCAAATTTGATGTACGATTGGGAGGCAGCTCCAAAAACGTATGCATCTCGTGACATTGGTATATTCTACCTAGATAGCCAAAGAATTGAGCGGTCATTTCCGAGTGTTGAGATGTCTCTACGGTATCAAGGGACTTGGTTCACTCCAAGTTTATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

649

Amino Acids

73.7

Weight (kDa)

4.81

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 175 - 399 8.1e-21 KIB1-4 beta-propeller
Beta-prop_KIB1-4 PF03478 544 - 619 1e-08 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 75
AccB1I GGYRCC 1 cut(s) 755
AccB7I CCANNNNNTGG 1 cut(s) 1198
AccBSI CCGCTC 1 cut(s) 1882
AccI GTMKAC 4 cut(s) 655, 1002, 1341, 1656
AccII CGCG 1 cut(s) 373
AciI CCGC 3 cut(s) 371, 1263, 1882
AclI AACGTT 2 cut(s) 114, 1098
AclWI GGATC 2 cut(s) 1183, 1710
AcsI RAATTY 4 cut(s) 467, 640, 1048, 1795
AcuI CTGAAG 1 cut(s) 1563
AfaI GTAC 5 cut(s) 296, 325, 515, 826, 1805
AfiI CCNNNNNNNGG 3 cut(s) 671, 741, 1198
AflII CTTAAG 1 cut(s) 772
AgsI TTSAA 5 cut(s) 199, 559, 902, 1024, 1054
AjnI CCWGG 2 cut(s) 46, 874
AluBI AGCT 6 cut(s) 143, 223, 522, 562, 996, 1820
AluI AGCT 6 cut(s) 143, 223, 522, 562, 996, 1820
Alw26I GTCTC 5 cut(s) 186, 438, 873, 1518, 1911
AlwI GGATC 2 cut(s) 1183, 1710
AlwNI CAGNNNCTG 1 cut(s) 794
AoxI GGCC 2 cut(s) 49, 1492
ApeKI GCWGC 5 cut(s) 229, 334, 504, 833, 1817
ApoI RAATTY 4 cut(s) 467, 640, 1048, 1795
AseI ATTAAT 1 cut(s) 1530
AsuC2I CCSGG 1 cut(s) 1617
AsuHPI GGTGA 5 cut(s) 1250, 1298, 1439, 1499, 1559
BanI GGYRCC 1 cut(s) 755
BanII GRGCYC 1 cut(s) 679
BarI GAAGNNNNNNTAC 2 cut(s) 1052, 1084
BauI CACGAG 1 cut(s) 1839
BbsI GAAGAC 2 cut(s) 591, 1563
BbvI GCAGC 5 cut(s) 216, 346, 516, 845, 1829
BccI CCATC 7 cut(s) 576, 791, 1200, 1277, 1328, 1445, 1475
BceAI ACGGC 2 cut(s) 49, 80
BcgI CGANNNNNNTGC 4 cut(s) 73, 107, 914, 948
BciT130I CCWGG 2 cut(s) 48, 876
BclI TGATCA 4 cut(s) 388, 615, 621, 1396
BcnI CCSGG 1 cut(s) 1617
BcoDI GTCTC 5 cut(s) 186, 438, 873, 1518, 1911
BfaI CTAG 1 cut(s) 1862
BfrI CTTAAG 1 cut(s) 772
BfuAI ACCTGC 1 cut(s) 75
BisI GCNGC 7 cut(s) 230, 335, 371, 505, 834, 1264, 1818
BlpI GCTNAGC 1 cut(s) 401
BlsI GCNGC 7 cut(s) 231, 336, 372, 506, 835, 1265, 1819
Bme1390I CCNGG 3 cut(s) 48, 876, 1617
BmiI GGNNCC 4 cut(s) 676, 757, 1091, 1732
BmrFI CCNGG 3 cut(s) 48, 876, 1617
BmsI GCATC 5 cut(s) 197, 1030, 1600, 1799, 1844
BpiI GAAGAC 2 cut(s) 591, 1563
BplI GAGNNNNNCTC 2 cut(s) 666, 698
BpmI CTGGAG 1 cut(s) 897
Bpu10I CCTNAGC 2 cut(s) 224, 567
Bpu1102I GCTNAGC 1 cut(s) 401
BpuEI CTTGAG 3 cut(s) 718, 1135, 1346
BpuMI CCSGG 1 cut(s) 1617
Bsa29I ATCGAT 2 cut(s) 167, 1347
BsaAI YACGTR 1 cut(s) 517
BsaBI GATNNNNATC 5 cut(s) 173, 428, 620, 915, 1395
BsaJI CCNNGG 2 cut(s) 473, 735
Bsc4I CCNNNNNNNGG 3 cut(s) 671, 741, 1198
Bse1I ACTGG 2 cut(s) 309, 746
Bse3DI GCAATG 5 cut(s) 405, 499, 1180, 1685, 1697
Bse8I GATNNNNATC 5 cut(s) 173, 428, 620, 915, 1395
BseBI CCWGG 2 cut(s) 48, 876
BseCI ATCGAT 2 cut(s) 167, 1347
BseDI CCNNGG 2 cut(s) 473, 735
BseGI GGATG 3 cut(s) 429, 587, 1369
BseJI GATNNNNATC 5 cut(s) 173, 428, 620, 915, 1395
BseLI CCNNNNNNNGG 3 cut(s) 671, 741, 1198
BseMI GCAATG 5 cut(s) 405, 499, 1180, 1685, 1697
BseMII CTCAG 1 cut(s) 1020
BseNI ACTGG 2 cut(s) 309, 746
BseXI GCAGC 5 cut(s) 216, 346, 516, 845, 1829
BsgI GTGCAG 1 cut(s) 889
Bsh1236I CGCG 1 cut(s) 373
Bsh1285I CGRYCG 2 cut(s) 25, 93
BshFI GGCC 2 cut(s) 51, 1494
BshNI GGYRCC 1 cut(s) 755
BshVI ATCGAT 2 cut(s) 167, 1347
BsiEI CGRYCG 2 cut(s) 25, 93
BsiSI CCGG 2 cut(s) 954, 1616
BslFI GGGAC 1 cut(s) 1936
BslI CCNNNNNNNGG 3 cut(s) 671, 741, 1198
BsmAI GTCTC 5 cut(s) 186, 438, 873, 1518, 1911
BsmFI GGGAC 1 cut(s) 1936
BsmI GAATGC 1 cut(s) 764
BsnI GGCC 2 cut(s) 51, 1494
Bsp1286I GDGCHC 1 cut(s) 679
Bsp1720I GCTNAGC 1 cut(s) 401
Bsp19I CCATGG 1 cut(s) 473
BspACI CCGC 3 cut(s) 371, 1263, 1882
BspANI GGCC 2 cut(s) 51, 1494
BspCNI CTCAG 1 cut(s) 1019
BspDI ATCGAT 2 cut(s) 167, 1347
BspFNI CGCG 1 cut(s) 373
BspHI TCATGA 3 cut(s) 463, 618, 1303
BspLI GGNNCC 4 cut(s) 676, 757, 1091, 1732
BspMI ACCTGC 1 cut(s) 75
BspPI GGATC 2 cut(s) 1183, 1710
BspT107I GGYRCC 1 cut(s) 755
BspTI CTTAAG 1 cut(s) 772
BsrBI CCGCTC 1 cut(s) 1882
BsrDI GCAATG 5 cut(s) 405, 499, 1180, 1685, 1697
BsrI ACTGG 2 cut(s) 309, 746
BssECI CCNNGG 2 cut(s) 473, 735
BssNAI GTATAC 1 cut(s) 1657
BssSI CACGAG 1 cut(s) 1839
BssT1I CCWWGG 1 cut(s) 473
Bst1107I GTATAC 1 cut(s) 1657
Bst2BI CACGAG 1 cut(s) 1839
Bst2UI CCWGG 2 cut(s) 48, 876
Bst4CI ACNGT 2 cut(s) 829, 1914
Bst6I CTCTTC 1 cut(s) 1216
BstAFI CTTAAG 1 cut(s) 772
BstAPI GCANNNNNTGC 2 cut(s) 367, 411
BstBAI YACGTR 1 cut(s) 517
BstC8I GCNNGC 4 cut(s) 193, 221, 412, 529
BstDEI CTNAG 5 cut(s) 224, 401, 567, 1006, 1384
BstDSI CCRYGG 1 cut(s) 473
BstF5I GGATG 3 cut(s) 429, 587, 1369
BstFNI CGCG 1 cut(s) 373
BstMAI GTCTC 5 cut(s) 186, 438, 873, 1518, 1911
BstMCI CGRYCG 2 cut(s) 25, 93
BstMWI GCNNNNNNNGC 7 cut(s) 216, 229, 367, 411, 528, 568, 788
BstNI CCWGG 2 cut(s) 48, 876
BstSCI CCNGG 3 cut(s) 46, 874, 1615
BstSNI TACGTA 1 cut(s) 517
BstUI CGCG 1 cut(s) 373
BstV1I GCAGC 5 cut(s) 216, 346, 516, 845, 1829
BstV2I GAAGAC 2 cut(s) 591, 1563
BstXI CCANNNNNNTGG 1 cut(s) 54
BstZ17I GTATAC 1 cut(s) 1657
Bsu15I ATCGAT 2 cut(s) 167, 1347
BsuRI GGCC 2 cut(s) 51, 1494
BsuTUI ATCGAT 2 cut(s) 167, 1347
BtgI CCRYGG 1 cut(s) 473
BtsCI GGATG 3 cut(s) 429, 587, 1369
BtsI GCAGTG 1 cut(s) 460
BtsIMutI CAGTG 1 cut(s) 460
BveI ACCTGC 1 cut(s) 75
Cac8I GCNNGC 4 cut(s) 193, 221, 412, 529
CaiI CAGNNNCTG 1 cut(s) 794
CciI TCATGA 3 cut(s) 463, 618, 1303
ClaI ATCGAT 2 cut(s) 167, 1347
Csp6I GTAC 5 cut(s) 295, 324, 514, 825, 1804
CviAII CATG 7 cut(s) 355, 464, 474, 619, 888, 1079, 1304
CviQI GTAC 5 cut(s) 295, 324, 514, 825, 1804
DdeI CTNAG 5 cut(s) 224, 401, 567, 1006, 1384
Eam1104I CTCTTC 1 cut(s) 1216
EarI CTCTTC 1 cut(s) 1216
Eco105I TACGTA 1 cut(s) 517
Eco130I CCWWGG 1 cut(s) 473
Eco24I GRGCYC 1 cut(s) 679
Eco32I GATATC 1 cut(s) 352
Eco57I CTGAAG 1 cut(s) 1563
EcoRI GAATTC 1 cut(s) 467
EcoRII CCWGG 2 cut(s) 46, 874
EcoRV GATATC 1 cut(s) 352
EcoT14I CCWWGG 1 cut(s) 473
EcoT22I ATGCAT 4 cut(s) 766, 1141, 1630, 1837
EcoT38I GRGCYC 1 cut(s) 679
ErhI CCWWGG 1 cut(s) 473
FaeI CATG 7 cut(s) 358, 467, 477, 622, 891, 1082, 1307
FalI AAGNNNNNCTT 2 cut(s) 980, 1012
FaqI GGGAC 1 cut(s) 1936
FatI CATG 7 cut(s) 354, 463, 473, 618, 887, 1078, 1303
FbaI TGATCA 4 cut(s) 388, 615, 621, 1396
FblI GTMKAC 4 cut(s) 655, 1002, 1341, 1656
Fnu4HI GCNGC 7 cut(s) 230, 335, 371, 505, 834, 1264, 1818
FokI GGATG 3 cut(s) 436, 594, 1376
FriOI GRGCYC 1 cut(s) 679
Fsp4HI GCNGC 7 cut(s) 230, 335, 371, 505, 834, 1264, 1818
FspBI CTAG 1 cut(s) 1862
GluI GCNGC 7 cut(s) 230, 335, 371, 505, 834, 1264, 1818
GsuI CTGGAG 1 cut(s) 897
HaeIII GGCC 2 cut(s) 51, 1494
HapII CCGG 2 cut(s) 954, 1616
Hin1II CATG 7 cut(s) 358, 467, 477, 622, 891, 1082, 1307
HincII GTYRAC 1 cut(s) 13
HindII GTYRAC 1 cut(s) 13
HindIII AAGCTT 3 cut(s) 221, 520, 994
HinfI GANTC 7 cut(s) 179, 812, 926, 1004, 1163, 1537, 1746
HpaII CCGG 2 cut(s) 954, 1616
HphI GGTGA 5 cut(s) 1250, 1298, 1439, 1499, 1559
Hpy166II GTNNAC 7 cut(s) 13, 656, 1003, 1132, 1342, 1657, 1932
Hpy188I TCNGA 9 cut(s) 22, 380, 538, 717, 796, 1353, 1536, 1768, 1893
Hpy8I GTNNAC 7 cut(s) 13, 656, 1003, 1132, 1342, 1657, 1932
Hpy99I CGWCG 2 cut(s) 1319, 1673
HpyAV CCTTC 6 cut(s) 268, 720, 1427, 1484, 1538, 1744
HpyCH4III ACNGT 2 cut(s) 829, 1914
HpyCH4IV ACGT 4 cut(s) 114, 516, 1098, 1829
HpyF10VI GCNNNNNNNGC 7 cut(s) 216, 229, 367, 411, 528, 568, 788
HpyF3I CTNAG 5 cut(s) 224, 401, 567, 1006, 1384
HpySE526I ACGT 4 cut(s) 114, 516, 1098, 1829
Hsp92II CATG 7 cut(s) 358, 467, 477, 622, 891, 1082, 1307
Ksp22I TGATCA 4 cut(s) 388, 615, 621, 1396
LmnI GCTCC 3 cut(s) 358, 674, 1825
Lsp1109I GCAGC 5 cut(s) 216, 346, 516, 845, 1829
LweI GCATC 5 cut(s) 197, 1030, 1600, 1799, 1844
MaeI CTAG 1 cut(s) 1862
MaeII ACGT 4 cut(s) 114, 516, 1098, 1829
MaeIII GTNAC 6 cut(s) 477, 893, 1009, 1115, 1238, 1841
MbiI CCGCTC 1 cut(s) 1882
MhlI GDGCHC 1 cut(s) 679
MlyI GAGTC 4 cut(s) 188, 920, 998, 1755
MmeI TCCRAC 1 cut(s) 709
Mph1103I ATGCAT 4 cut(s) 766, 1141, 1630, 1837
MseI TTAA 6 cut(s) 660, 773, 843, 1101, 1530, 1623
MslI CAYNNNNRTG 2 cut(s) 1308, 1690
MspCI CTTAAG 1 cut(s) 772
MspI CCGG 2 cut(s) 954, 1616
MspR9I CCNGG 3 cut(s) 48, 876, 1617
Mva1269I GAATGC 1 cut(s) 764
MvaI CCWGG 2 cut(s) 48, 876
MvnI CGCG 1 cut(s) 373
MwoI GCNNNNNNNGC 7 cut(s) 216, 229, 367, 411, 528, 568, 788
NciI CCSGG 1 cut(s) 1617
NcoI CCATGG 1 cut(s) 473
NlaIII CATG 7 cut(s) 358, 467, 477, 622, 891, 1082, 1307
NlaIV GGNNCC 4 cut(s) 676, 757, 1091, 1732
NmuCI GTSAC 4 cut(s) 893, 1115, 1238, 1841
NsiI ATGCAT 4 cut(s) 766, 1141, 1630, 1837
PagI TCATGA 3 cut(s) 463, 618, 1303
PctI GAATGC 1 cut(s) 764
PfeI GAWTC 3 cut(s) 812, 1163, 1537
PflMI CCANNNNNTGG 1 cut(s) 1198
PkrI GCNGC 7 cut(s) 231, 336, 372, 506, 835, 1265, 1819
Ple19I CGATCG 2 cut(s) 25, 93
PleI GAGTC 4 cut(s) 187, 920, 998, 1754
PpsI GAGTC 4 cut(s) 187, 920, 998, 1754
Ppu21I YACGTR 1 cut(s) 517
PshBI ATTAAT 1 cut(s) 1530
Psp1406I AACGTT 2 cut(s) 114, 1098
Psp6I CCWGG 2 cut(s) 46, 874
PspGI CCWGG 2 cut(s) 46, 874
PspN4I GGNNCC 4 cut(s) 676, 757, 1091, 1732
PstNI CAGNNNCTG 1 cut(s) 794
PvuI CGATCG 2 cut(s) 25, 93
RsaI GTAC 5 cut(s) 296, 325, 515, 826, 1805
RsaNI GTAC 5 cut(s) 295, 324, 514, 825, 1804
RseI CAYNNNNRTG 2 cut(s) 1308, 1690
SaqAI TTAA 6 cut(s) 660, 773, 843, 1101, 1530, 1623
SatI GCNGC 7 cut(s) 230, 335, 371, 505, 834, 1264, 1818
SchI GAGTC 4 cut(s) 188, 920, 998, 1755
ScrFI CCNGG 3 cut(s) 48, 876, 1617
SduI GDGCHC 1 cut(s) 679
SfaNI GCATC 5 cut(s) 197, 1030, 1600, 1799, 1844
SmiMI CAYNNNNRTG 2 cut(s) 1308, 1690
SmlI CTYRAG 4 cut(s) 697, 772, 1150, 1325
SmoI CTYRAG 4 cut(s) 697, 772, 1150, 1325
SnaBI TACGTA 1 cut(s) 517
SsiI CCGC 3 cut(s) 371, 1263, 1882
SspMI CTAG 1 cut(s) 1862
StyD4I CCNGG 3 cut(s) 46, 874, 1615
StyI CCWWGG 1 cut(s) 473
TaaI ACNGT 2 cut(s) 829, 1914
TaiI ACGT 4 cut(s) 117, 519, 1101, 1832
TaqI TCGA 9 cut(s) 89, 145, 167, 177, 205, 768, 854, 929, 1347
TatI WGTACW 1 cut(s) 294
TauI GCSGC 2 cut(s) 373, 1266
TfiI GAWTC 3 cut(s) 812, 1163, 1537
Tru1I TTAA 6 cut(s) 660, 773, 843, 1101, 1530, 1623
Tru9I TTAA 6 cut(s) 660, 773, 843, 1101, 1530, 1623
TscAI CASTG 1 cut(s) 460
TseFI GTSAC 4 cut(s) 893, 1115, 1238, 1841
TseI GCWGC 5 cut(s) 229, 334, 504, 833, 1817
Tsp45I GTSAC 4 cut(s) 893, 1115, 1238, 1841
TspGWI ACGGA 1 cut(s) 1332
TspRI CASTG 1 cut(s) 460
Van91I CCANNNNNTGG 1 cut(s) 1198
Vha464I CTTAAG 1 cut(s) 772
VspI ATTAAT 1 cut(s) 1530
XapI RAATTY 4 cut(s) 467, 640, 1048, 1795
XmiI GTMKAC 4 cut(s) 655, 1002, 1341, 1656
XspI CTAG 1 cut(s) 1862
Zsp2I ATGCAT 4 cut(s) 766, 1141, 1630, 1837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.