Rroxscaffold_7G00205920

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000144
Physical Location & Seq
Reverse (-)
55587156 .. 55588595
1440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00205920.1

Sequence Viewer

Length: 1440 bp
ATGGTCATGCTCTCTCTATTTTCGTCTTGCAGTAACCTGGGAAACTACCTCAGCTGGTTCACCAGGTCTGTTTCCTTCAAGCAATTACAAGAACACAAAATATCTGCAGGCAAGAGAAAACAAATTGAGAACTGCAACGACGACCAAATAATTATTTGTCACGGGTCAGTCGGGTGCTGGCAGACACCATCACAAGACATCATGGAGGAGATTCTACAGAAAATGGGTTTAATTGCTCGTACACGCTTAGCCAAGGTCTGCATGTCTTGGAGCTCACTTGTTATGAGACCTGACATCCGCAGTGCTCCACAACTGCCATGGTTAGTCCACCCTCAAACCCCAAACACTAACTACTTAACCTTTTCCAACCTCTCTGAGGGTGAAGTTTTGAACTTGGAGCTCCCAAAGCGATTCCGAGGACATGGCGAGTTCAAGTTTCGAGCGGCTTCTCAAGGTTGGTTGATCATTTTACAAGAAAAAGGACTCACCTTTGATATGTTCCTTTACAATCCTATTTCCAGATCCCAACACCAACTTCCTTCTTTGGACACTATTCCATCTTTCCAATCTTACCAACAAGCTTCGCTACGGAAGGGTCATAATGCCGAGGATTTTGTAATTAAAGTTGTGTTGTCTAGTCCAAATATCTCCGAATGCATTGTGGCAGCCGTTTTCGAACCTCAGAAGGTATTGGGTTTGTGCAGACCTGGAGACAAAAGCTGGACTGTCTTTGAGATACTGAATCATGGTGAGAACGACTTTCTCATAGATTTACTTTTTTCGCGGGGCATGCTATACGGCTTAGTTGATATTTCTTGTAATAAAAAGTCCACCAAGAATGGCATCAGCGCAGCTCGCTCCTTAAACTTTGGAGATGATCAGGCAATGACAGTGGAATTGAAGTTGGTGTACGACCAAAAAGAAGTTGGTCATACTACAGAATATCATGATGGCTATCTAACTTCTTTAAATAGTGACTACAACTCATATGTGTTAGAATCAGCAACCAATAGCGACAAGGAAATCTTGTTGATCCATCAAATGCTCGATTGTTTAATGCTTGACTGTGAAGATGATAATGAGTGGGAAATCGAATATCAGAGGACAAGAGGGTTTATAGTATACAAGATTGACCTCGAGTGTGGCAACTTTCGTGAGGTACAAAATTTGGGGGACCAAATAATATTTTTGGCAGAGCATAGCTCTTCCTCGTCCTTTCCAGCAAGTGATTTCAAACTACAAGGAAATTGCATTTATTTTGCAACAAGCGGATATGGAGCTATCTGCCTTCCTCGTAAGACGCCTCTTGGACCAAATATATCTCGTGAAATCGGAATCTTTAGTTTAGATAACGGAAAAGTTAAGCGACCCTTTCCAAGTATTGATGTTGTTGGCATTAATTCACCTTGTCAACTGAGTTGGTTCAGTCCGAGTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

479

Amino Acids

54.12

Weight (kDa)

5.72

Isoelectric Point (pI)

46.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 122 - 446 2.9e-35 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 443
AccI GTMKAC 1 cut(s) 1122
AccII CGCG 1 cut(s) 784
AciI CCGC 4 cut(s) 298, 443, 784, 1269
AclWI GGATC 2 cut(s) 516, 1027
AcsI RAATTY 1 cut(s) 1165
AcyI GRCGYC 1 cut(s) 1301
AfaI GTAC 3 cut(s) 241, 911, 1161
AfiI CCNNNNNNNGG 1 cut(s) 376
AgsI TTSAA 5 cut(s) 79, 391, 433, 901, 1234
AjnI CCWGG 3 cut(s) 36, 62, 706
AjuI GAANNNNNNNTTGG 2 cut(s) 519, 551
AluBI AGCT 8 cut(s) 54, 273, 400, 581, 720, 854, 1203, 1280
AluI AGCT 8 cut(s) 54, 273, 400, 581, 720, 854, 1203, 1280
Alw21I GWGCWC 3 cut(s) 275, 307, 402
Alw26I GTCTC 2 cut(s) 280, 705
AlwI GGATC 2 cut(s) 516, 1027
Ama87I CYCGRG 1 cut(s) 1136
ApeKI GCWGC 2 cut(s) 665, 851
ApoI RAATTY 1 cut(s) 1165
AseI ATTAAT 1 cut(s) 1398
AspLEI GCGC 1 cut(s) 851
AspS9I GGNCC 2 cut(s) 1174, 1310
AsuHPI GGTGA 5 cut(s) 52, 392, 478, 761, 1395
AsuII TTCGAA 1 cut(s) 675
AvaI CYCGRG 1 cut(s) 1136
AvaII GGWCC 2 cut(s) 1174, 1310
BanII GRGCYC 2 cut(s) 275, 402
BarI GAAGNNNNNNTAC 2 cut(s) 893, 925
BauI CACGAG 1 cut(s) 1323
Bbv12I GWGCWC 3 cut(s) 275, 307, 402
BbvCI CCTCAGC 1 cut(s) 50
BbvI GCAGC 2 cut(s) 677, 863
BccI CCATC 4 cut(s) 196, 565, 944, 1044
BceAI ACGGC 2 cut(s) 653, 814
BciT130I CCWGG 3 cut(s) 38, 64, 708
BclI TGATCA 2 cut(s) 462, 877
BcoDI GTCTC 2 cut(s) 280, 705
BfaI CTAG 1 cut(s) 636
BfmI CTRYAG 3 cut(s) 105, 215, 936
BisI GCNGC 3 cut(s) 444, 666, 852
BlpI GCTNAGC 1 cut(s) 247
BlsI GCNGC 3 cut(s) 445, 667, 853
Bme1390I CCNGG 3 cut(s) 38, 64, 708
Bme18I GGWCC 2 cut(s) 1174, 1310
BmeT110I CYCGRG 1 cut(s) 1136
BmgT120I GGNCC 2 cut(s) 1174, 1310
BmiI GGNNCC 1 cut(s) 1175
BmrFI CCNGG 3 cut(s) 38, 64, 708
BmsI GCATC 1 cut(s) 852
BplI GAGNNNNNCTC 2 cut(s) 1187, 1219
BpmI CTGGAG 1 cut(s) 729
Bpu10I CCTNAGC 1 cut(s) 50
Bpu1102I GCTNAGC 1 cut(s) 247
Bpu14I TTCGAA 1 cut(s) 675
BpuEI CTTGAG 1 cut(s) 435
BsaBI GATNNNNATC 1 cut(s) 954
BsaHI GRCGYC 1 cut(s) 1301
BsaI GGTCTC 1 cut(s) 280
BsaJI CCNNGG 5 cut(s) 37, 252, 317, 415, 606
Bsc4I CCNNNNNNNGG 1 cut(s) 376
Bse3DI GCAATG 1 cut(s) 891
Bse8I GATNNNNATC 1 cut(s) 954
BseBI CCWGG 3 cut(s) 38, 64, 708
BseDI CCNNGG 5 cut(s) 37, 252, 317, 415, 606
BseGI GGATG 1 cut(s) 294
BseJI GATNNNNATC 1 cut(s) 954
BseLI CCNNNNNNNGG 1 cut(s) 376
BseMI GCAATG 1 cut(s) 891
BseMII CTCAG 4 cut(s) 64, 366, 695, 1406
BseRI GAGGAG 1 cut(s) 221
BseXI GCAGC 2 cut(s) 677, 863
BsgI GTGCAG 1 cut(s) 721
Bsh1236I CGCG 1 cut(s) 784
BsiHKAI GWGCWC 3 cut(s) 275, 307, 402
BsiHKCI CYCGRG 1 cut(s) 1136
BslFI GGGAC 1 cut(s) 1187
BslI CCNNNNNNNGG 1 cut(s) 376
BsmAI GTCTC 2 cut(s) 280, 705
BsmFI GGGAC 1 cut(s) 1187
BsmI GAATGC 1 cut(s) 659
Bso31I GGTCTC 1 cut(s) 280
BsoBI CYCGRG 1 cut(s) 1136
Bsp119I TTCGAA 1 cut(s) 675
Bsp1286I GDGCHC 3 cut(s) 275, 307, 402
Bsp143I GATC 4 cut(s) 462, 521, 877, 1032
Bsp1720I GCTNAGC 1 cut(s) 247
Bsp19I CCATGG 1 cut(s) 317
BspACI CCGC 4 cut(s) 298, 443, 784, 1269
BspCNI CTCAG 4 cut(s) 63, 367, 694, 1407
BspFNI CGCG 1 cut(s) 784
BspHI TCATGA 1 cut(s) 946
BspLI GGNNCC 1 cut(s) 1175
BspMAI CTGCAG 1 cut(s) 109
BspPI GGATC 2 cut(s) 516, 1027
BspQI GCTCTTC 1 cut(s) 1210
BspT104I TTCGAA 1 cut(s) 675
BspTNI GGTCTC 1 cut(s) 280
BsrBI CCGCTC 1 cut(s) 443
BsrDI GCAATG 1 cut(s) 891
BssECI CCNNGG 5 cut(s) 37, 252, 317, 415, 606
BssMI GATC 4 cut(s) 462, 521, 877, 1032
BssNAI GTATAC 1 cut(s) 1123
BssNI GRCGYC 1 cut(s) 1301
BssSI CACGAG 1 cut(s) 1323
BssT1I CCWWGG 2 cut(s) 252, 317
Bst1107I GTATAC 1 cut(s) 1123
Bst2BI CACGAG 1 cut(s) 1323
Bst2UI CCWGG 3 cut(s) 38, 64, 708
Bst4CI ACNGT 3 cut(s) 727, 892, 1067
Bst6I CTCTTC 1 cut(s) 1210
BstACI GRCGYC 1 cut(s) 1301
BstBI TTCGAA 1 cut(s) 675
BstC8I GCNNGC 4 cut(s) 109, 179, 791, 856
BstDEI CTNAG 6 cut(s) 50, 247, 375, 681, 802, 1415
BstDSI CCRYGG 1 cut(s) 317
BstENI CCTNNNNNAGG 1 cut(s) 374
BstF5I GGATG 1 cut(s) 294
BstFNI CGCG 1 cut(s) 784
BstHHI GCGC 1 cut(s) 851
BstKTI GATC 4 cut(s) 465, 524, 880, 1035
BstMAI GTCTC 2 cut(s) 280, 705
BstMBI GATC 4 cut(s) 462, 521, 877, 1032
BstMWI GCNNNNNNNGC 3 cut(s) 406, 790, 855
BstNI CCWGG 3 cut(s) 38, 64, 708
BstNSI RCATGY 2 cut(s) 265, 793
BstSCI CCNGG 3 cut(s) 36, 62, 706
BstSFI CTRYAG 3 cut(s) 105, 215, 936
BstUI CGCG 1 cut(s) 784
BstV1I GCAGC 2 cut(s) 677, 863
BstX2I RGATCY 1 cut(s) 521
BstYI RGATCY 1 cut(s) 521
BstZ17I GTATAC 1 cut(s) 1123
BtgI CCRYGG 1 cut(s) 317
BtsCI GGATG 1 cut(s) 294
BtsI GCAGTG 1 cut(s) 307
BtsIMutI CAGTG 2 cut(s) 307, 897
Cac8I GCNNGC 4 cut(s) 109, 179, 791, 856
CciI TCATGA 1 cut(s) 946
CfoI GCGC 1 cut(s) 851
Cfr13I GGNCC 2 cut(s) 1174, 1310
CseI GACGC 1 cut(s) 1309
CsiI ACCWGGT 1 cut(s) 62
Csp6I GTAC 3 cut(s) 240, 910, 1160
CspCI CAANNNNNGTGG 2 cut(s) 873, 908
CviAII CATG 8 cut(s) 7, 202, 262, 318, 422, 746, 790, 947
CviQI GTAC 3 cut(s) 240, 910, 1160
DdeI CTNAG 6 cut(s) 50, 247, 375, 681, 802, 1415
DpnI GATC 4 cut(s) 464, 523, 879, 1034
DpnII GATC 4 cut(s) 462, 521, 877, 1032
DraI TTTAAA 1 cut(s) 969
Eam1104I CTCTTC 1 cut(s) 1210
EarI CTCTTC 1 cut(s) 1210
Ecl136II GAGCTC 2 cut(s) 273, 400
Eco130I CCWWGG 2 cut(s) 252, 317
Eco24I GRGCYC 2 cut(s) 275, 402
Eco31I GGTCTC 1 cut(s) 280
Eco47I GGWCC 2 cut(s) 1174, 1310
Eco53kI GAGCTC 2 cut(s) 273, 400
Eco88I CYCGRG 1 cut(s) 1136
EcoICRI GAGCTC 2 cut(s) 273, 400
EcoNI CCTNNNNNAGG 1 cut(s) 374
EcoRII CCWGG 3 cut(s) 36, 62, 706
EcoT14I CCWWGG 2 cut(s) 252, 317
EcoT22I ATGCAT 1 cut(s) 659
EcoT38I GRGCYC 2 cut(s) 275, 402
ErhI CCWWGG 2 cut(s) 252, 317
FaeI CATG 8 cut(s) 10, 205, 265, 321, 425, 749, 793, 950
FalI AAGNNNNNCTT 4 cut(s) 1010, 1042, 1355, 1387
FaqI GGGAC 1 cut(s) 1187
FatI CATG 8 cut(s) 6, 201, 261, 317, 421, 745, 789, 946
FauI CCCGC 1 cut(s) 777
FauNDI CATATG 1 cut(s) 988
FbaI TGATCA 2 cut(s) 462, 877
FblI GTMKAC 1 cut(s) 1122
Fnu4HI GCNGC 3 cut(s) 444, 666, 852
FokI GGATG 1 cut(s) 281
FriOI GRGCYC 2 cut(s) 275, 402
Fsp4HI GCNGC 3 cut(s) 444, 666, 852
FspBI CTAG 1 cut(s) 636
GlaI GCGC 1 cut(s) 850
GluI GCNGC 3 cut(s) 444, 666, 852
GsuI CTGGAG 1 cut(s) 729
HgaI GACGC 1 cut(s) 1309
HhaI GCGC 1 cut(s) 851
Hin1I GRCGYC 1 cut(s) 1301
Hin1II CATG 8 cut(s) 10, 205, 265, 321, 425, 749, 793, 950
Hin6I GCGC 1 cut(s) 849
HinP1I GCGC 1 cut(s) 849
HincII GTYRAC 1 cut(s) 1412
HindII GTYRAC 1 cut(s) 1412
HindIII AAGCTT 1 cut(s) 579
HinfI GANTC 6 cut(s) 211, 411, 483, 742, 998, 1335
HphI GGTGA 5 cut(s) 52, 392, 478, 761, 1395
Hpy166II GTNNAC 7 cut(s) 60, 242, 328, 831, 910, 1123, 1412
Hpy188I TCNGA 7 cut(s) 376, 416, 652, 684, 1101, 1334, 1431
Hpy188III TCNNGA 4 cut(s) 519, 947, 1154, 1325
Hpy8I GTNNAC 7 cut(s) 60, 242, 328, 831, 910, 1123, 1412
Hpy99I CGWCG 1 cut(s) 143
HpyAV CCTTC 5 cut(s) 85, 549, 586, 679, 1298
HpyCH4III ACNGT 3 cut(s) 727, 892, 1067
HpyCH4V TGCA 8 cut(s) 30, 107, 135, 261, 657, 702, 1251, 1262
HpyF10VI GCNNNNNNNGC 3 cut(s) 406, 790, 855
HpyF3I CTNAG 6 cut(s) 50, 247, 375, 681, 802, 1415
Hsp92I GRCGYC 1 cut(s) 1301
Hsp92II CATG 8 cut(s) 10, 205, 265, 321, 425, 749, 793, 950
HspAI GCGC 1 cut(s) 849
Ksp22I TGATCA 2 cut(s) 462, 877
Kzo9I GATC 4 cut(s) 462, 521, 877, 1032
LguI GCTCTTC 1 cut(s) 1210
LmnI GCTCC 6 cut(s) 270, 310, 397, 405, 863, 1277
Lsp1109I GCAGC 2 cut(s) 677, 863
LweI GCATC 1 cut(s) 852
MabI ACCWGGT 1 cut(s) 62
MaeI CTAG 1 cut(s) 636
MaeIII GTNAC 3 cut(s) 32, 158, 974
MalI GATC 4 cut(s) 464, 523, 879, 1034
MbiI CCGCTC 1 cut(s) 443
MboI GATC 4 cut(s) 462, 521, 877, 1032
MboII GAAGA 2 cut(s) 1082, 1197
MflI RGATCY 1 cut(s) 521
MhlI GDGCHC 3 cut(s) 275, 307, 402
MluCI AATT 9 cut(s) 83, 123, 150, 231, 618, 896, 1165, 1246, 1399
MlyI GAGTC 1 cut(s) 477
MmeI TCCRAC 1 cut(s) 390
Mph1103I ATGCAT 1 cut(s) 659
MseI TTAA 8 cut(s) 230, 356, 621, 863, 968, 1055, 1362, 1398
MspA1I CMGCKG 1 cut(s) 54
MspR9I CCNGG 3 cut(s) 38, 64, 708
Mva1269I GAATGC 1 cut(s) 659
MvaI CCWGG 3 cut(s) 38, 64, 708
MvnI CGCG 1 cut(s) 784
MwoI GCNNNNNNNGC 3 cut(s) 406, 790, 855
NcoI CCATGG 1 cut(s) 317
NdeI CATATG 1 cut(s) 988
NdeII GATC 4 cut(s) 462, 521, 877, 1032
NlaIII CATG 8 cut(s) 10, 205, 265, 321, 425, 749, 793, 950
NlaIV GGNNCC 1 cut(s) 1175
NmeAIII GCCGAG 1 cut(s) 631
NmuCI GTSAC 2 cut(s) 158, 974
NsiI ATGCAT 1 cut(s) 659
NspI RCATGY 2 cut(s) 265, 793
NspV TTCGAA 1 cut(s) 675
PaeI GCATGC 1 cut(s) 793
PaeR7I CTCGAG 1 cut(s) 1136
PagI TCATGA 1 cut(s) 946
PciSI GCTCTTC 1 cut(s) 1210
PctI GAATGC 1 cut(s) 659
PfeI GAWTC 5 cut(s) 211, 411, 742, 998, 1335
PkrI GCNGC 3 cut(s) 445, 667, 853
PleI GAGTC 1 cut(s) 477
PpsI GAGTC 1 cut(s) 477
PshBI ATTAAT 1 cut(s) 1398
Psp124BI GAGCTC 2 cut(s) 275, 402
Psp6I CCWGG 3 cut(s) 36, 62, 706
PspGI CCWGG 3 cut(s) 36, 62, 706
PspN4I GGNNCC 1 cut(s) 1175
PspPI GGNCC 2 cut(s) 1174, 1310
PspXI VCTCGAGB 1 cut(s) 1136
PstI CTGCAG 1 cut(s) 109
PsuI RGATCY 1 cut(s) 521
PvuII CAGCTG 1 cut(s) 54
RsaI GTAC 3 cut(s) 241, 911, 1161
RsaNI GTAC 3 cut(s) 240, 910, 1160
SacI GAGCTC 2 cut(s) 275, 402
SapI GCTCTTC 1 cut(s) 1210
SaqAI TTAA 8 cut(s) 230, 356, 621, 863, 968, 1055, 1362, 1398
SatI GCNGC 3 cut(s) 444, 666, 852
Sau3AI GATC 4 cut(s) 462, 521, 877, 1032
Sau96I GGNCC 2 cut(s) 1174, 1310
SchI GAGTC 1 cut(s) 477
ScrFI CCNGG 3 cut(s) 38, 64, 708
SduI GDGCHC 3 cut(s) 275, 307, 402
SexAI ACCWGGT 1 cut(s) 62
SfaNI GCATC 1 cut(s) 852
SfcI CTRYAG 3 cut(s) 105, 215, 936
Sfr274I CTCGAG 1 cut(s) 1136
SfuI TTCGAA 1 cut(s) 675
SinI GGWCC 2 cut(s) 1174, 1310
SlaI CTCGAG 1 cut(s) 1136
SmlI CTYRAG 2 cut(s) 450, 1136
SmoI CTYRAG 2 cut(s) 450, 1136
SphI GCATGC 1 cut(s) 793
Sse9I AATT 9 cut(s) 83, 123, 150, 231, 618, 896, 1165, 1246, 1399
SsiI CCGC 4 cut(s) 298, 443, 784, 1269
SspI AATATT 1 cut(s) 1185
SspMI CTAG 1 cut(s) 636
SstI GAGCTC 2 cut(s) 275, 402
StyD4I CCNGG 3 cut(s) 36, 62, 706
StyI CCWWGG 2 cut(s) 252, 317
TaaI ACNGT 3 cut(s) 727, 892, 1067
TaqI TCGA 5 cut(s) 439, 675, 1047, 1092, 1137
TasI AATT 9 cut(s) 83, 123, 150, 231, 618, 896, 1165, 1246, 1399
TauI GCSGC 1 cut(s) 446
TfiI GAWTC 5 cut(s) 211, 411, 742, 998, 1335
Tru1I TTAA 8 cut(s) 230, 356, 621, 863, 968, 1055, 1362, 1398
Tru9I TTAA 8 cut(s) 230, 356, 621, 863, 968, 1055, 1362, 1398
TscAI CASTG 2 cut(s) 307, 897
TseFI GTSAC 2 cut(s) 158, 974
TseI GCWGC 2 cut(s) 665, 851
Tsp45I GTSAC 2 cut(s) 158, 974
TspGWI ACGGA 2 cut(s) 604, 1368
TspRI CASTG 2 cut(s) 307, 897
VpaK11BI GGWCC 2 cut(s) 1174, 1310
VspI ATTAAT 1 cut(s) 1398
XagI CCTNNNNNAGG 1 cut(s) 374
XapI RAATTY 1 cut(s) 1165
XceI RCATGY 2 cut(s) 265, 793
XcmI CCANNNNNNNNNTGG 2 cut(s) 315, 923
XhoI CTCGAG 1 cut(s) 1136
XmiI GTMKAC 1 cut(s) 1122
XspI CTAG 1 cut(s) 636
Zsp2I ATGCAT 1 cut(s) 659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.