RLG00000013040

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000144
Physical Location & Seq
Reverse (-)
25313128 .. 25314576
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013040

Sequence Viewer

Length: 1449 bp
ATGGGGAATTGGAACATGCTCGCAAACAGGATAGATCGGACTCTATTTTTAGTTTTGGATAAACTGGTAGACTACCTCTACAGCCTTGTAGACTATGTGTCGTTAATCAGGTGTGTTTTCTTCAGGAAGCTTCAATACAAGAATCAAAAGTGCAGTAGCTCCTGGCAGGAAGCACCTGAAGATGTCATAGAGATGATTCTGAAGCACACGAACCTTAGTGGTCGAGTACGATTCAGCAGTTTGTGCAAGTTTTGGAGGTGTGTTTCGATGCGAAAAGACATTCATGCTCCACCACAACTCCCATGGTTAGTTCACCCTCAAGTCCCAGCCTTCCCTAGCTACTTGAGCTTCTCAAGCCTCTCTGAGGGAAAAATTTTCAAGTTTAGGTTCCCTAGGACAAATTACGGTACGTTGTTTTGTGGCTCTTCCAAAGGTTGGCTGTTTATGTCTAAGATGTACGGATGGCTGAGTTCTGAACAATTGTTTTTACTGAATCCAATTTCAGGAGCACGGCACCAACTACCCTACTTGGTGCATTGTTCCACTGTTGAGGTACTCGCGTTATCCAGCAATGATATCTCAGAATGTATAGTGGCAATAGTTCTTAATGATGACAAAGAATTGGGATTGTGTAGACCTGGAGACAAAAGCTGGAGCGTGTTCCAAGTATTAGATGAGATCAACTATGTGGGCGACATAACCAGCTTATTGTTTTCCTCTTCGGGTACGCTATTGGCCTTGGTTGAGTACTGTAGTGGTGCCAATGGTGTTGGTGCAGTTCGGACTTTGAAACTTGGAGGGGACATTGAAGTGAAATTGCAGTTGGTCTATTACGAACAAAATTGGTGGATAAATAATGGGCTGATCGATGTCTTTCCCGGAGTGGCATACCATGCATATTTGTTAGAATCAACCAACAACGAAGTTCTGTTGATCCGTCATTTTTATGATCATGTTGATGGAGAAGATGTGAATGAGGATAACATGGAAGGCAACAACAACAACAACAACCACGAACAAGGAGATGAGGTCCTCATCGAGGAACTAGGTAATGAGGATATGGGAGGAGAAGGCAATAATGAGGAGAATGAGGATGAAAATCCAGCTGGCTTTGTTTACCTTAGGACAAAATGTTTCGGAATATATAAGATTGATGCTGACAATGGCAACTTTCTAAAGGTTGAAACTTTGGGGGACCAAATATTATTTGTGGCAAACTATGGTTCTTCCTTGGCCCTTCCGGCTTCTGATTTCAAAGAGTTGCAGGGGAATTGCATATATTTTGCAACAATAGGAGGCTTTAGTCCACATCTAGAATCCTGTATATCACGTGAGATTGGCATCTTCTACCTAGATAGTGGAAGAGTCGAGCGACCCTTTCCAAGTATGATGATACCAACAGACGGCTGTGGACCGAGTTGGTTTACTCCAAGTTTAATGGACAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

483

Amino Acids

54.47

Weight (kDa)

4.86

Isoelectric Point (pI)

34.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 117 - 449 2.8e-33 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 513, 758
AccB7I CCANNNNNTGG 1 cut(s) 435
AccI GTMKAC 3 cut(s) 69, 90, 634
AccII CGCG 1 cut(s) 560
AclWI GGATC 1 cut(s) 928
AcsI RAATTY 1 cut(s) 372
AcuI CTGAAG 3 cut(s) 106, 198, 221
AcvI CACGTG 1 cut(s) 1331
AfaI GTAC 6 cut(s) 228, 409, 458, 555, 727, 749
AfiI CCNNNNNNNGG 5 cut(s) 364, 435, 503, 1039, 1403
AgsI TTSAA 6 cut(s) 134, 379, 790, 809, 1184, 1255
AhdI GACNNNNNGTC 1 cut(s) 97
AjnI CCWGG 2 cut(s) 161, 637
AjuI GAANNNNNNNTTGG 2 cut(s) 806, 838
AluBI AGCT 7 cut(s) 130, 159, 339, 348, 651, 705, 1106
AluI AGCT 7 cut(s) 130, 159, 339, 348, 651, 705, 1106
Alw21I GWGCWC 1 cut(s) 511
Alw26I GTCTC 1 cut(s) 636
AlwI GGATC 1 cut(s) 928
AoxI GGCC 2 cut(s) 735, 1233
ApoI RAATTY 1 cut(s) 372
AspA2I CCTAGG 1 cut(s) 392
AspS9I GGNCC 4 cut(s) 1030, 1195, 1234, 1412
AsuC2I CCSGG 1 cut(s) 879
AsuHPI GGTGA 1 cut(s) 305
AvaII GGWCC 3 cut(s) 1030, 1195, 1412
AvrII CCTAGG 1 cut(s) 392
AxyI CCTNAGG 1 cut(s) 1121
BaeI ACNNNNGTAYC 2 cut(s) 545, 578
BanI GGYRCC 2 cut(s) 513, 758
BarI GAAGNNNNNNTAC 2 cut(s) 119, 151
BbrPI CACGTG 1 cut(s) 1331
Bbv12I GWGCWC 1 cut(s) 511
BccI CCATC 2 cut(s) 456, 953
BceAI ACGGC 2 cut(s) 527, 1420
BciT130I CCWGG 2 cut(s) 163, 639
BclI TGATCA 1 cut(s) 949
BcnI CCSGG 1 cut(s) 879
BcoDI GTCTC 1 cut(s) 636
BfaI CTAG 5 cut(s) 336, 393, 1046, 1313, 1352
BfmI CTRYAG 2 cut(s) 79, 751
BglI GCCNNNNNGGC 1 cut(s) 1241
BlnI CCTAGG 1 cut(s) 392
BmcAI AGTACT 1 cut(s) 749
Bme1390I CCNGG 3 cut(s) 163, 639, 879
Bme18I GGWCC 3 cut(s) 1030, 1195, 1412
BmeRI GACNNNNNGTC 1 cut(s) 97
BmgT120I GGNCC 4 cut(s) 1030, 1195, 1234, 1412
BmiI GGNNCC 4 cut(s) 389, 515, 760, 1196
BmrFI CCNGG 3 cut(s) 163, 639, 879
BmsI GCATC 3 cut(s) 258, 1144, 1350
BpmI CTGGAG 2 cut(s) 660, 673
BpuEI CTTGAG 3 cut(s) 303, 337, 364
BpuMI CCSGG 1 cut(s) 879
Bsa29I ATCGAT 1 cut(s) 867
BsaAI YACGTR 1 cut(s) 1331
BsaBI GATNNNNATC 2 cut(s) 1098, 1340
BsaJI CCNNGG 4 cut(s) 302, 392, 738, 1230
BsaXI ACNNNNNCTCC 6 cut(s) 282, 312, 954, 984, 1014, 1044
Bsc4I CCNNNNNNNGG 5 cut(s) 364, 435, 503, 1039, 1403
Bse1I ACTGG 1 cut(s) 69
Bse21I CCTNAGG 1 cut(s) 1121
Bse3DI GCAATG 1 cut(s) 577
Bse8I GATNNNNATC 2 cut(s) 1098, 1340
BseBI CCWGG 2 cut(s) 163, 639
BseCI ATCGAT 1 cut(s) 867
BseDI CCNNGG 4 cut(s) 302, 392, 738, 1230
BseGI GGATG 2 cut(s) 467, 1099
BseJI GATNNNNATC 2 cut(s) 1098, 1340
BseLI CCNNNNNNNGG 5 cut(s) 364, 435, 503, 1039, 1403
BseMI GCAATG 1 cut(s) 577
BseMII CTCAG 3 cut(s) 354, 458, 594
BseNI ACTGG 1 cut(s) 69
BseRI GAGGAG 2 cut(s) 1080, 1097
BseYI CCCAGC 1 cut(s) 325
BsgI GTGCAG 2 cut(s) 172, 795
Bsh1236I CGCG 1 cut(s) 560
BshFI GGCC 2 cut(s) 737, 1235
BshNI GGYRCC 2 cut(s) 513, 758
BshVI ATCGAT 1 cut(s) 867
BsiHKAI GWGCWC 1 cut(s) 511
BsiSI CCGG 2 cut(s) 879, 1241
BslFI GGGAC 3 cut(s) 308, 815, 1208
BslI CCNNNNNNNGG 5 cut(s) 364, 435, 503, 1039, 1403
BsmAI GTCTC 1 cut(s) 636
BsmFI GGGAC 3 cut(s) 308, 815, 1208
BsnI GGCC 2 cut(s) 737, 1235
Bsp1286I GDGCHC 1 cut(s) 511
Bsp143I GATC 5 cut(s) 34, 678, 864, 933, 949
Bsp19I CCATGG 1 cut(s) 302
BspANI GGCC 2 cut(s) 737, 1235
BspCNI CTCAG 3 cut(s) 355, 459, 593
BspDI ATCGAT 1 cut(s) 867
BspFNI CGCG 1 cut(s) 560
BspLI GGNNCC 4 cut(s) 389, 515, 760, 1196
BspPI GGATC 1 cut(s) 928
BspQI GCTCTTC 1 cut(s) 430
BspT107I GGYRCC 2 cut(s) 513, 758
BsrDI GCAATG 1 cut(s) 577
BsrI ACTGG 1 cut(s) 69
BssECI CCNNGG 4 cut(s) 302, 392, 738, 1230
BssMI GATC 5 cut(s) 34, 678, 864, 933, 949
BssT1I CCWWGG 4 cut(s) 302, 392, 738, 1230
Bst2UI CCWGG 2 cut(s) 163, 639
Bst4CI ACNGT 3 cut(s) 407, 547, 752
Bst6I CTCTTC 3 cut(s) 430, 724, 1357
BstAPI GCANNNNNTGC 2 cut(s) 243, 893
BstBAI YACGTR 1 cut(s) 1331
BstC8I GCNNGC 2 cut(s) 21, 1108
BstDEI CTNAG 6 cut(s) 215, 363, 450, 467, 580, 1121
BstDSI CCRYGG 1 cut(s) 302
BstENI CCTNNNNNAGG 2 cut(s) 362, 1037
BstF5I GGATG 2 cut(s) 467, 1099
BstFNI CGCG 1 cut(s) 560
BstKTI GATC 5 cut(s) 37, 681, 867, 936, 952
BstMAI GTCTC 1 cut(s) 636
BstMBI GATC 5 cut(s) 34, 678, 864, 933, 949
BstMWI GCNNNNNNNGC 5 cut(s) 243, 345, 354, 893, 1241
BstNI CCWGG 2 cut(s) 163, 639
BstNSI RCATGY 1 cut(s) 19
BstSCI CCNGG 3 cut(s) 161, 637, 877
BstSFI CTRYAG 2 cut(s) 79, 751
BstUI CGCG 1 cut(s) 560
Bsu15I ATCGAT 1 cut(s) 867
Bsu36I CCTNAGG 1 cut(s) 1121
BsuRI GGCC 2 cut(s) 737, 1235
BsuTUI ATCGAT 1 cut(s) 867
BtgI CCRYGG 1 cut(s) 302
BtsCI GGATG 2 cut(s) 467, 1099
BtsIMutI CAGTG 1 cut(s) 543
Cac8I GCNNGC 2 cut(s) 21, 1108
Cfr13I GGNCC 4 cut(s) 1030, 1195, 1234, 1412
ClaI ATCGAT 1 cut(s) 867
Csp6I GTAC 6 cut(s) 227, 408, 457, 554, 726, 748
CspCI CAANNNNNGTGG 2 cut(s) 827, 862
CviAII CATG 6 cut(s) 16, 284, 303, 893, 953, 985
CviQI GTAC 6 cut(s) 227, 408, 457, 554, 726, 748
DdeI CTNAG 6 cut(s) 215, 363, 450, 467, 580, 1121
DpnI GATC 5 cut(s) 36, 680, 866, 935, 951
DpnII GATC 5 cut(s) 34, 678, 864, 933, 949
DriI GACNNNNNGTC 1 cut(s) 97
Eam1104I CTCTTC 3 cut(s) 430, 724, 1357
Eam1105I GACNNNNNGTC 1 cut(s) 97
EarI CTCTTC 3 cut(s) 430, 724, 1357
Eco130I CCWWGG 4 cut(s) 302, 392, 738, 1230
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 3 cut(s) 1030, 1195, 1412
Eco57I CTGAAG 3 cut(s) 106, 198, 221
Eco72I CACGTG 1 cut(s) 1331
Eco81I CCTNAGG 1 cut(s) 1121
EcoNI CCTNNNNNAGG 2 cut(s) 362, 1037
EcoO109I RGGNCCY 1 cut(s) 1030
EcoRII CCWGG 2 cut(s) 161, 637
EcoRV GATATC 1 cut(s) 577
EcoT14I CCWWGG 4 cut(s) 302, 392, 738, 1230
EcoT22I ATGCAT 1 cut(s) 898
ErhI CCWWGG 4 cut(s) 302, 392, 738, 1230
FaeI CATG 6 cut(s) 19, 287, 306, 896, 956, 988
FaqI GGGAC 3 cut(s) 308, 815, 1208
FatI CATG 6 cut(s) 15, 283, 302, 892, 952, 984
FbaI TGATCA 1 cut(s) 949
FblI GTMKAC 3 cut(s) 69, 90, 634
FokI GGATG 2 cut(s) 474, 1106
FspBI CTAG 5 cut(s) 336, 393, 1046, 1313, 1352
GsaI CCCAGC 1 cut(s) 329
GsuI CTGGAG 2 cut(s) 660, 673
HaeIII GGCC 2 cut(s) 737, 1235
HapII CCGG 2 cut(s) 879, 1241
Hin1II CATG 6 cut(s) 19, 287, 306, 896, 956, 988
HindIII AAGCTT 1 cut(s) 128
HinfI GANTC 8 cut(s) 40, 142, 196, 231, 493, 908, 1316, 1365
HpaII CCGG 2 cut(s) 879, 1241
HphI GGTGA 1 cut(s) 305
Hpy166II GTNNAC 8 cut(s) 70, 91, 313, 635, 1117, 1307, 1412, 1425
Hpy188I TCNGA 8 cut(s) 39, 201, 364, 475, 583, 783, 1139, 1249
Hpy188III TCNNGA 3 cut(s) 124, 504, 1313
Hpy8I GTNNAC 8 cut(s) 70, 91, 313, 635, 1117, 1307, 1412, 1425
HpyAV CCTTC 4 cut(s) 340, 983, 1064, 1247
HpyCH4III ACNGT 3 cut(s) 407, 547, 752
HpyCH4IV ACGT 2 cut(s) 410, 1330
HpyCH4V TGCA 9 cut(s) 153, 246, 535, 776, 820, 896, 1264, 1275, 1286
HpyF10VI GCNNNNNNNGC 5 cut(s) 243, 345, 354, 893, 1241
HpyF3I CTNAG 6 cut(s) 215, 363, 450, 467, 580, 1121
HpySE526I ACGT 2 cut(s) 410, 1330
Hsp92II CATG 6 cut(s) 19, 287, 306, 896, 956, 988
Ksp22I TGATCA 1 cut(s) 949
Kzo9I GATC 5 cut(s) 34, 678, 864, 933, 949
LguI GCTCTTC 1 cut(s) 430
LmnI GCTCC 4 cut(s) 164, 292, 506, 654
LweI GCATC 3 cut(s) 258, 1144, 1350
MaeI CTAG 5 cut(s) 336, 393, 1046, 1313, 1352
MaeII ACGT 2 cut(s) 410, 1330
MalI GATC 5 cut(s) 36, 680, 866, 935, 951
MboI GATC 5 cut(s) 34, 678, 864, 933, 949
MboII GAAGA 8 cut(s) 112, 191, 417, 711, 977, 1218, 1336, 1374
MfeI CAATTG 1 cut(s) 479
MhlI GDGCHC 1 cut(s) 511
MluCI AATT 9 cut(s) 7, 372, 400, 479, 498, 620, 815, 841, 1270
MlyI GAGTC 2 cut(s) 34, 1374
Mph1103I ATGCAT 1 cut(s) 898
MseI TTAA 3 cut(s) 104, 606, 1436
MslI CAYNNNNRTG 4 cut(s) 191, 809, 945, 957
MspA1I CMGCKG 1 cut(s) 1106
MspI CCGG 2 cut(s) 879, 1241
MspR9I CCNGG 3 cut(s) 163, 639, 879
MunI CAATTG 1 cut(s) 479
MvaI CCWGG 2 cut(s) 163, 639
MvnI CGCG 1 cut(s) 560
MwoI GCNNNNNNNGC 5 cut(s) 243, 345, 354, 893, 1241
NciI CCSGG 1 cut(s) 879
NcoI CCATGG 1 cut(s) 302
NdeII GATC 5 cut(s) 34, 678, 864, 933, 949
NlaIII CATG 6 cut(s) 19, 287, 306, 896, 956, 988
NlaIV GGNNCC 4 cut(s) 389, 515, 760, 1196
NsiI ATGCAT 1 cut(s) 898
NspI RCATGY 1 cut(s) 19
PciSI GCTCTTC 1 cut(s) 430
PfeI GAWTC 6 cut(s) 142, 196, 231, 493, 908, 1316
PflMI CCANNNNNTGG 1 cut(s) 435
PfoI TCCNGGA 1 cut(s) 877
PleI GAGTC 2 cut(s) 34, 1373
PmaCI CACGTG 1 cut(s) 1331
PmlI CACGTG 1 cut(s) 1331
PpsI GAGTC 2 cut(s) 34, 1373
Ppu21I YACGTR 1 cut(s) 1331
PpuMI RGGWCCY 1 cut(s) 1030
Psp5II RGGWCCY 1 cut(s) 1030
Psp6I CCWGG 2 cut(s) 161, 637
PspCI CACGTG 1 cut(s) 1331
PspFI CCCAGC 1 cut(s) 325
PspGI CCWGG 2 cut(s) 161, 637
PspN4I GGNNCC 4 cut(s) 389, 515, 760, 1196
PspPI GGNCC 4 cut(s) 1030, 1195, 1234, 1412
PspPPI RGGWCCY 1 cut(s) 1030
PvuII CAGCTG 1 cut(s) 1106
RsaI GTAC 6 cut(s) 228, 409, 458, 555, 727, 749
RsaNI GTAC 6 cut(s) 227, 408, 457, 554, 726, 748
RseI CAYNNNNRTG 4 cut(s) 191, 809, 945, 957
SapI GCTCTTC 1 cut(s) 430
SaqAI TTAA 3 cut(s) 104, 606, 1436
Sau3AI GATC 5 cut(s) 34, 678, 864, 933, 949
Sau96I GGNCC 4 cut(s) 1030, 1195, 1234, 1412
ScaI AGTACT 1 cut(s) 749
SchI GAGTC 2 cut(s) 34, 1374
ScrFI CCNGG 3 cut(s) 163, 639, 879
SduI GDGCHC 1 cut(s) 511
SfaNI GCATC 3 cut(s) 258, 1144, 1350
SfcI CTRYAG 2 cut(s) 79, 751
SinI GGWCC 3 cut(s) 1030, 1195, 1412
SmiMI CAYNNNNRTG 4 cut(s) 191, 809, 945, 957
SmlI CTYRAG 3 cut(s) 318, 343, 352
SmoI CTYRAG 3 cut(s) 318, 343, 352
Sse9I AATT 9 cut(s) 7, 372, 400, 479, 498, 620, 815, 841, 1270
SspI AATATT 1 cut(s) 1203
SspMI CTAG 5 cut(s) 336, 393, 1046, 1313, 1352
StyD4I CCNGG 3 cut(s) 161, 637, 877
StyI CCWWGG 4 cut(s) 302, 392, 738, 1230
TaaI ACNGT 3 cut(s) 407, 547, 752
TaiI ACGT 2 cut(s) 413, 1333
TaqI TCGA 5 cut(s) 223, 266, 867, 1038, 1368
TaqII GACCGA 1 cut(s) 1429
TasI AATT 9 cut(s) 7, 372, 400, 479, 498, 620, 815, 841, 1270
TatI WGTACW 1 cut(s) 747
TfiI GAWTC 6 cut(s) 142, 196, 231, 493, 908, 1316
Tru1I TTAA 3 cut(s) 104, 606, 1436
Tru9I TTAA 3 cut(s) 104, 606, 1436
TscAI CASTG 1 cut(s) 550
TspDTI ATGAA 2 cut(s) 272, 1110
TspGWI ACGGA 2 cut(s) 474, 926
TspRI CASTG 1 cut(s) 550
Van91I CCANNNNNTGG 1 cut(s) 435
VpaK11BI GGWCC 3 cut(s) 1030, 1195, 1412
XagI CCTNNNNNAGG 2 cut(s) 362, 1037
XapI RAATTY 1 cut(s) 372
XbaI TCTAGA 1 cut(s) 1312
XceI RCATGY 1 cut(s) 19
XcmI CCANNNNNNNNNTGG 1 cut(s) 300
XmaJI CCTAGG 1 cut(s) 392
XmiI GTMKAC 3 cut(s) 69, 90, 634
XspI CTAG 5 cut(s) 336, 393, 1046, 1313, 1352
ZrmI AGTACT 1 cut(s) 749
Zsp2I ATGCAT 1 cut(s) 898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.