FvH4_2g04880

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000144
Physical Location & Seq
Forward (+)
3788030 .. 3790262
2233 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g04880.t1

Sequence Viewer

Length: 1569 bp
ATGATCGAGTCTCTATTCGCTTGCTTTAATCCGCGATGCAATTCGAGCGGGATTAGGCTGCTAAAGAGAAAAAAAATCCTGAAGAAACTAAAGAGAGAGCAGAAGGAAAACGAAGATGAGCAGTACAGAATTAGTGAGTGTAGCAATTGGCAGTCACCTCCTCCTGATATCATGGAGAAAGTTCTGCAGCGTACTAGAGTAAGTGATCAAATAAGGCTAAGCATTGCCTGCAAGTCTTGGATGTCGATCGTTACGCGTAGAGATATTCACAGTGCTTCTCATGAACTCCCATGGTTGCTAGTCCCTCGAACCCAACATTGCAGCAACAAGTACCTGACTTTTGCCAGCCTCTCCGACGAAAAATTTGTCAAGCTGAAGCTACCCAAGAAAGTTCGCGGATGGTGGATATATGGGTCTTCTAAAGGTTGGTTGATCATGGTCAAGGAAAATGGATTAAACTCTACCATGTGTCTACTAAACCCAATTTCCGGAGTTCTACACCAACTTCCGCCCTTGAGAACACTACCATCTTTCTCATTTTTTGTAAAAACGAGTAATTGGAAGCTTTTCGGTGCCAATGAATACGTTCTTCATGTTGCATTACTTACCCCGAGCGATATTAATTCTTCAGACCCTTTTACGGTAGCCATAGTTTTTCAAGATTTTAAGCTCCGGAAGACATTGGGTTTATGCAAACTTGGAGACCTGACTTGGAGTGTCTTCCAGGTGTTAGACGACGATGAGCAAAACAACGAATCACTTGGAGGTGTATTGTTTTCTTCAAACACTCTGTTTGCTTTGGTCAGTGGTGAAACAGATGGTGTCGTCGCAGCCACTCGCACTCTAAACTTGGGAGATCATGAACTGAAACTGAAATTGGTTCATGACAAGCATGAAAACAAGAATGTGAGAGTTGATGAATTTAATATTGACTATGTCAAAATTTTCAATGGAGACTACAACTCACTATTGCTAGAATCCACCGGCAATGAAATCTTGGTAATCCATCAAATGTTAGATTTTGTTTATTTCAGACAACATGACCTTGATGATCTCGATGACAATGAAGCTGGTGGTGACAATGTTGTTGTAGATAATCAGGAAGGCATATATCAAGGCAATGATGATGATGATGAAGGTAATCATGACAATGATCCTGAGGTTGGCAACTTAATGGAAGATCAAGATGGAGGAGAAGTTAATGATGTTGTTATTGATATAGACGCACCCGGCTTTAATCCACTTTGCAGAACAAGGAGTTTTAGAGTATACAAAATTGATCAAAATAATAACAATTTAGTTCCGTTGAATAACTTGGGGGACCAATTGTTATTTATCGGAGATGCTGGTTCTACCTCTCTTCCGGCTAGTATATTTCCAGGAGTAGAAAGGAATTGCGTATATTTTACAACAAATACTTTTTGGGATATGGAATTGACTCGTAGAACATATAAGTCTCGTGAGATCGGCGTATTTTACTTGGATAATGAAAGAATTAGGAGATCTTTTCCGAGTGTCAACATGTCATTGTCGCACCAAGCCACGTGGTTCACTCCAAGTTTAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

523

Amino Acids

59.58

Weight (kDa)

5.41

Isoelectric Point (pI)

33.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 114 - 492 7.4e-34 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 572
AccBSI CCGCTC 1 cut(s) 48
AccI GTMKAC 2 cut(s) 472, 1269
AccII CGCG 3 cut(s) 34, 256, 396
AccIII TCCGGA 2 cut(s) 488, 672
AciI CCGC 4 cut(s) 32, 48, 396, 509
AclWI GGATC 1 cut(s) 1148
AcsI RAATTY 3 cut(s) 362, 920, 942
AcuI CTGAAG 3 cut(s) 101, 395, 612
AcvI CACGTG 1 cut(s) 1545
AfaI GTAC 3 cut(s) 125, 193, 332
AfiI CCNNNNNNNGG 3 cut(s) 488, 640, 1163
AflIII ACRYGT 2 cut(s) 254, 1521
AgsI TTSAA 4 cut(s) 659, 783, 949, 1309
AjnI CCWGG 2 cut(s) 723, 1378
AjuI GAANNNNNNNTTGG 2 cut(s) 860, 892
AluBI AGCT 5 cut(s) 373, 379, 565, 670, 1070
AluI AGCT 5 cut(s) 373, 379, 565, 670, 1070
Alw26I GTCTC 4 cut(s) 15, 696, 948, 1461
AlwI GGATC 1 cut(s) 1148
Ama87I CYCGRG 1 cut(s) 610
Aor13HI TCCGGA 2 cut(s) 488, 672
ApeKI GCWGC 4 cut(s) 58, 187, 321, 830
ApoI RAATTY 3 cut(s) 362, 920, 942
ArsI GACNNNNNNTTYG 4 cut(s) 347, 351, 379, 383
AseI ATTAAT 1 cut(s) 621
Asp700I GAANNNNTTC 2 cut(s) 566, 585
AspS9I GGNCC 1 cut(s) 1321
AsuC2I CCSGG 1 cut(s) 1230
AsuHPI GGTGA 3 cut(s) 147, 821, 1088
AvaI CYCGRG 1 cut(s) 610
AvaII GGWCC 1 cut(s) 1321
AxyI CCTNAGG 1 cut(s) 1158
BanI GGYRCC 1 cut(s) 572
BauI CACGAG 1 cut(s) 1458
BbrPI CACGTG 1 cut(s) 1545
BbsI GAAGAC 3 cut(s) 408, 683, 712
BbvI GCAGC 4 cut(s) 45, 199, 333, 842
BccI CCATC 5 cut(s) 393, 535, 812, 1014, 1181
BciT130I CCWGG 2 cut(s) 725, 1380
BclI TGATCA 3 cut(s) 205, 432, 1279
BcnI CCSGG 1 cut(s) 1230
BcoDI GTCTC 4 cut(s) 15, 696, 948, 1461
BfaI CTAG 4 cut(s) 195, 299, 974, 1368
BfmI CTRYAG 1 cut(s) 185
BglII AGATCT 1 cut(s) 1502
BisI GCNGC 4 cut(s) 59, 188, 322, 831
BlpI GCTNAGC 1 cut(s) 218
BlsI GCNGC 4 cut(s) 60, 189, 323, 832
Bme1390I CCNGG 3 cut(s) 725, 1230, 1380
Bme18I GGWCC 1 cut(s) 1321
BmeT110I CYCGRG 1 cut(s) 610
BmgT120I GGNCC 1 cut(s) 1321
BmiI GGNNCC 2 cut(s) 574, 1322
BmrFI CCNGG 3 cut(s) 725, 1230, 1380
BmsI GCATC 2 cut(s) 26, 1333
BpiI GAAGAC 3 cut(s) 408, 683, 712
Bpu1102I GCTNAGC 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 535
BpuMI CCSGG 1 cut(s) 1230
BsaAI YACGTR 1 cut(s) 1545
BsaBI GATNNNNATC 1 cut(s) 245
BsaI GGTCTC 1 cut(s) 696
BsaJI CCNNGG 1 cut(s) 290
BsaWI WCCGGW 2 cut(s) 488, 672
BsaXI ACNNNNNCTCC 2 cut(s) 1182, 1212
Bsc4I CCNNNNNNNGG 3 cut(s) 488, 640, 1163
Bse118I RCCGGY 1 cut(s) 983
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 4 cut(s) 222, 316, 994, 1126
Bse8I GATNNNNATC 1 cut(s) 245
BseAI TCCGGA 2 cut(s) 488, 672
BseBI CCWGG 2 cut(s) 725, 1380
BseDI CCNNGG 1 cut(s) 290
BseGI GGATG 2 cut(s) 246, 404
BseJI GATNNNNATC 1 cut(s) 245
BseLI CCNNNNNNNGG 3 cut(s) 488, 640, 1163
BseMI GCAATG 4 cut(s) 222, 316, 994, 1126
BseMII CTCAG 1 cut(s) 1149
BseRI GAGGAG 2 cut(s) 150, 1206
BseXI GCAGC 4 cut(s) 45, 199, 333, 842
Bsh1236I CGCG 3 cut(s) 34, 256, 396
Bsh1285I CGRYCG 1 cut(s) 249
BshNI GGYRCC 1 cut(s) 572
BsiEI CGRYCG 1 cut(s) 249
BsiHKCI CYCGRG 1 cut(s) 610
BsiSI CCGG 5 cut(s) 489, 673, 984, 1230, 1364
BslFI GGGAC 2 cut(s) 287, 1334
BslI CCNNNNNNNGG 3 cut(s) 488, 640, 1163
BsmAI GTCTC 4 cut(s) 15, 696, 948, 1461
BsmFI GGGAC 2 cut(s) 287, 1334
Bso31I GGTCTC 1 cut(s) 696
BsoBI CYCGRG 1 cut(s) 610
Bsp13I TCCGGA 2 cut(s) 488, 672
Bsp1720I GCTNAGC 1 cut(s) 218
Bsp19I CCATGG 1 cut(s) 290
BspACI CCGC 4 cut(s) 32, 48, 396, 509
BspCNI CTCAG 1 cut(s) 1150
BspEI TCCGGA 2 cut(s) 488, 672
BspFNI CGCG 3 cut(s) 34, 256, 396
BspHI TCATGA 4 cut(s) 280, 859, 883, 1144
BspLI GGNNCC 2 cut(s) 574, 1322
BspMAI CTGCAG 1 cut(s) 189
BspPI GGATC 1 cut(s) 1148
BspT107I GGYRCC 1 cut(s) 572
BspTNI GGTCTC 1 cut(s) 696
BsrBI CCGCTC 1 cut(s) 48
BsrDI GCAATG 4 cut(s) 222, 316, 994, 1126
BsrFI RCCGGY 1 cut(s) 983
BssAI RCCGGY 1 cut(s) 983
BssECI CCNNGG 1 cut(s) 290
BssNAI GTATAC 1 cut(s) 1270
BssSI CACGAG 1 cut(s) 1458
BssT1I CCWWGG 1 cut(s) 290
Bst1107I GTATAC 1 cut(s) 1270
Bst2BI CACGAG 1 cut(s) 1458
Bst2UI CCWGG 2 cut(s) 725, 1380
Bst4CI ACNGT 2 cut(s) 272, 643
Bst6I CTCTTC 1 cut(s) 1365
BstAPI GCANNNNNTGC 1 cut(s) 228
BstBAI YACGTR 1 cut(s) 1545
BstC8I GCNNGC 3 cut(s) 22, 229, 346
BstDEI CTNAG 2 cut(s) 218, 1158
BstDSI CCRYGG 1 cut(s) 290
BstF5I GGATG 2 cut(s) 246, 404
BstFNI CGCG 3 cut(s) 34, 256, 396
BstMAI GTCTC 4 cut(s) 15, 696, 948, 1461
BstMCI CGRYCG 1 cut(s) 249
BstMWI GCNNNNNNNGC 2 cut(s) 45, 228
BstNI CCWGG 2 cut(s) 725, 1380
BstNSI RCATGY 1 cut(s) 1525
BstSCI CCNGG 3 cut(s) 723, 1228, 1378
BstSFI CTRYAG 1 cut(s) 185
BstUI CGCG 3 cut(s) 34, 256, 396
BstV1I GCAGC 4 cut(s) 45, 199, 333, 842
BstV2I GAAGAC 3 cut(s) 408, 683, 712
BstX2I RGATCY 1 cut(s) 1502
BstYI RGATCY 1 cut(s) 1502
BstZ17I GTATAC 1 cut(s) 1270
Bsu36I CCTNAGG 1 cut(s) 1158
BtgI CCRYGG 1 cut(s) 290
BtgZI GCGATG 1 cut(s) 49
BtsCI GGATG 2 cut(s) 246, 404
BtsIMutI CAGTG 2 cut(s) 277, 811
Cac8I GCNNGC 3 cut(s) 22, 229, 346
CciI TCATGA 4 cut(s) 280, 859, 883, 1144
Cfr10I RCCGGY 1 cut(s) 983
Cfr13I GGNCC 1 cut(s) 1321
CseI GACGC 1 cut(s) 1232
Csp6I GTAC 3 cut(s) 124, 192, 331
CspCI CAANNNNNGTGG 2 cut(s) 1526, 1561
CviQI GTAC 3 cut(s) 124, 192, 331
DdeI CTNAG 2 cut(s) 218, 1158
DraI TTTAAA 1 cut(s) 1563
Eam1104I CTCTTC 1 cut(s) 1365
EarI CTCTTC 1 cut(s) 1365
EciI GGCGGA 1 cut(s) 498
Eco130I CCWWGG 1 cut(s) 290
Eco31I GGTCTC 1 cut(s) 696
Eco32I GATATC 1 cut(s) 169
Eco47I GGWCC 1 cut(s) 1321
Eco57I CTGAAG 3 cut(s) 101, 395, 612
Eco72I CACGTG 1 cut(s) 1545
Eco81I CCTNAGG 1 cut(s) 1158
Eco88I CYCGRG 1 cut(s) 610
EcoRII CCWGG 2 cut(s) 723, 1378
EcoRV GATATC 1 cut(s) 169
EcoT14I CCWWGG 1 cut(s) 290
ErhI CCWWGG 1 cut(s) 290
FaqI GGGAC 2 cut(s) 287, 1334
FauI CCCGC 1 cut(s) 41
FbaI TGATCA 3 cut(s) 205, 432, 1279
FblI GTMKAC 2 cut(s) 472, 1269
Fnu4HI GCNGC 4 cut(s) 59, 188, 322, 831
FokI GGATG 2 cut(s) 253, 411
Fsp4HI GCNGC 4 cut(s) 59, 188, 322, 831
FspBI CTAG 4 cut(s) 195, 299, 974, 1368
GluI GCNGC 4 cut(s) 59, 188, 322, 831
HapII CCGG 5 cut(s) 489, 673, 984, 1230, 1364
HgaI GACGC 1 cut(s) 1232
HincII GTYRAC 1 cut(s) 1519
HindII GTYRAC 1 cut(s) 1519
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 4 cut(s) 8, 755, 977, 1438
HpaII CCGG 5 cut(s) 489, 673, 984, 1230, 1364
HphI GGTGA 3 cut(s) 147, 821, 1088
Hpy166II GTNNAC 4 cut(s) 473, 1270, 1519, 1551
Hpy188I TCNGA 5 cut(s) 355, 631, 1034, 1340, 1512
Hpy8I GTNNAC 4 cut(s) 473, 1270, 1519, 1551
Hpy99I CGWCG 3 cut(s) 359, 740, 830
HpyAV CCTTC 3 cut(s) 97, 1097, 1130
HpyCH4III ACNGT 2 cut(s) 272, 643
HpyCH4IV ACGT 2 cut(s) 585, 1544
HpyCH4V TGCA 7 cut(s) 39, 187, 231, 321, 599, 693, 1248
HpyF10VI GCNNNNNNNGC 2 cut(s) 45, 228
HpyF3I CTNAG 2 cut(s) 218, 1158
HpySE526I ACGT 2 cut(s) 585, 1544
Kpn2I TCCGGA 2 cut(s) 488, 672
Ksp22I TGATCA 3 cut(s) 205, 432, 1279
LmnI GCTCC 1 cut(s) 675
Lsp1109I GCAGC 4 cut(s) 45, 199, 333, 842
LweI GCATC 2 cut(s) 26, 1333
MaeI CTAG 4 cut(s) 195, 299, 974, 1368
MaeII ACGT 2 cut(s) 585, 1544
MaeIII GTNAC 3 cut(s) 153, 250, 1076
MbiI CCGCTC 1 cut(s) 48
MfeI CAATTG 2 cut(s) 145, 1325
MflI RGATCY 1 cut(s) 1502
MluI ACGCGT 1 cut(s) 254
MlyI GAGTC 2 cut(s) 17, 1432
MmeI TCCRAC 1 cut(s) 378
MnlI CCTC 8 cut(s) 168, 171, 315, 359, 758, 1153, 1184, 1366
MroI TCCGGA 2 cut(s) 488, 672
MroXI GAANNNNTTC 2 cut(s) 566, 585
MseI TTAA 9 cut(s) 27, 455, 621, 666, 924, 1172, 1200, 1236, 1562
MslI CAYNNNNRTG 1 cut(s) 1149
MspI CCGG 5 cut(s) 489, 673, 984, 1230, 1364
MspR9I CCNGG 3 cut(s) 725, 1230, 1380
MunI CAATTG 2 cut(s) 145, 1325
MvaI CCWGG 2 cut(s) 725, 1380
MvnI CGCG 3 cut(s) 34, 256, 396
MwoI GCNNNNNNNGC 2 cut(s) 45, 228
NciI CCSGG 1 cut(s) 1230
NcoI CCATGG 1 cut(s) 290
NlaIV GGNNCC 2 cut(s) 574, 1322
NmuCI GTSAC 2 cut(s) 153, 1076
NspI RCATGY 1 cut(s) 1525
PagI TCATGA 4 cut(s) 280, 859, 883, 1144
PciI ACATGT 1 cut(s) 1521
PdmI GAANNNNTTC 2 cut(s) 566, 585
PfeI GAWTC 2 cut(s) 755, 977
PflFI GACNNNGTC 1 cut(s) 935
PfoI TCCNGGA 1 cut(s) 1378
PkrI GCNGC 4 cut(s) 60, 189, 323, 832
Ple19I CGATCG 1 cut(s) 249
PleI GAGTC 2 cut(s) 16, 1432
PmaCI CACGTG 1 cut(s) 1545
PmlI CACGTG 1 cut(s) 1545
PpsI GAGTC 2 cut(s) 16, 1432
Ppu21I YACGTR 1 cut(s) 1545
PscI ACATGT 1 cut(s) 1521
PshBI ATTAAT 1 cut(s) 621
Psp6I CCWGG 2 cut(s) 723, 1378
PspCI CACGTG 1 cut(s) 1545
PspGI CCWGG 2 cut(s) 723, 1378
PspN4I GGNNCC 2 cut(s) 574, 1322
PspPI GGNCC 1 cut(s) 1321
PstI CTGCAG 1 cut(s) 189
PsuI RGATCY 1 cut(s) 1502
PsyI GACNNNGTC 1 cut(s) 935
PvuI CGATCG 1 cut(s) 249
RsaI GTAC 3 cut(s) 125, 193, 332
RsaNI GTAC 3 cut(s) 124, 192, 331
RseI CAYNNNNRTG 1 cut(s) 1149
SaqAI TTAA 9 cut(s) 27, 455, 621, 666, 924, 1172, 1200, 1236, 1562
SatI GCNGC 4 cut(s) 59, 188, 322, 831
Sau96I GGNCC 1 cut(s) 1321
SchI GAGTC 2 cut(s) 17, 1432
ScrFI CCNGG 3 cut(s) 725, 1230, 1380
SfaNI GCATC 2 cut(s) 26, 1333
SfcI CTRYAG 1 cut(s) 185
SinI GGWCC 1 cut(s) 1321
SmiMI CAYNNNNRTG 1 cut(s) 1149
SmlI CTYRAG 1 cut(s) 514
SmoI CTYRAG 1 cut(s) 514
SsiI CCGC 4 cut(s) 32, 48, 396, 509
SspI AATATT 1 cut(s) 928
SspMI CTAG 4 cut(s) 195, 299, 974, 1368
StyD4I CCNGG 3 cut(s) 723, 1228, 1378
StyI CCWWGG 1 cut(s) 290
TaaI ACNGT 2 cut(s) 272, 643
TaiI ACGT 2 cut(s) 588, 1547
TaqI TCGA 5 cut(s) 6, 44, 245, 307, 1056
TatI WGTACW 1 cut(s) 123
TfiI GAWTC 2 cut(s) 755, 977
Tru1I TTAA 9 cut(s) 27, 455, 621, 666, 924, 1172, 1200, 1236, 1562
Tru9I TTAA 9 cut(s) 27, 455, 621, 666, 924, 1172, 1200, 1236, 1562
TscAI CASTG 2 cut(s) 277, 811
TseFI GTSAC 2 cut(s) 153, 1076
TseI GCWGC 4 cut(s) 58, 187, 321, 830
Tsp45I GTSAC 2 cut(s) 153, 1076
TspGWI ACGGA 1 cut(s) 1293
TspRI CASTG 2 cut(s) 277, 811
Tth111I GACNNNGTC 1 cut(s) 935
VpaK11BI GGWCC 1 cut(s) 1321
VspI ATTAAT 1 cut(s) 621
XapI RAATTY 3 cut(s) 362, 920, 942
XceI RCATGY 1 cut(s) 1525
XmiI GTMKAC 2 cut(s) 472, 1269
XmnI GAANNNNTTC 2 cut(s) 566, 585
XspI CTAG 4 cut(s) 195, 299, 974, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.