Rroxscaffold_7G00205770

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000144
Physical Location & Seq
Forward (+)
55394701 .. 55396795
2095 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00205770.1

Sequence Viewer

Length: 1551 bp
ATGGTCATGCTCTCTCTATATTTGTCTTACAGTAACTTGGGACACTACCTCCGCTGGTTTACCAGGTCTGTTTCCTTCAAGCAATTACATGAACACAAAATATCTGCAGGCAAGAGAAAACAAATCGAGAACTGCAACGACGACCAAATTACTTGTCATGGGTCAGTTGGGTGCTGGCAGACACCGCCACAAGACATCATGGAGGAGATTCTACAGAAAATGGGTTTAATTGCTCGTACACGCTTAGCCAAGGTCTGCATGTCTTGGAGTTCACTTGTTATGAGAGCTGATATCCGCAGTGCTCCGCAACTGCCATGGTTAGTACACCCTCAAACCCCAAACACCAACTACTTAACCTTTTCCAGCCTCTCTGAGGGTGAAGTTGTGAACTTGGAGCTCCCAAAGCGATTCCGAGGACAAGGCAAGTTCAAGTTTCGAGCGGCTTCTAAAGGTTGGTTGATCATTTTACAAGAAAAAGGATTCGGCTTTGATATGTTCCTATACAATCCGATTTCTAGAGCCCAACACCAACTTCCTTCCTTAAACACTATTCCATCTTTCCTATCTTTCCAACTAGCAAGAATGCTAGGGAAGGTTATCAACAATCATGCCAACAAACATGCCGAGAATTTTGTATCTAAAGTTGTGTTGTCTAGTCCAAATGTCTCAGAATGCATTGTGGCTGCCGTTTTCGAACCTCAGCATGAATTGGGATTATGCAGACCTGGAGACAAAAGCTGGACTGTCTTTGAGATACTGAATCATGAGGACGACTTCCTCATGGATTTACTTTTTTCGCAGGGCATGCTATACGGCTTTGTTGATAATAGCAAGTCCACCAAGAATGGCATCGGCGCAGCTCGCATCTTAAACTTTGGAGATGATCAGGCAATGACAGTGGAATTGAAGTTGGTCTACGGCCATAAAGAAGTTGGTAATACTACAGAATATCATGATGGCTTTCTAATCTTTTTAAATAGAGACTACAACTCATATTTGTTAGAATCAACAACAAATAGCGACAAGGAAATCTTGTTGATCCATCAAATGCTCGATTGTTTAATCCCCAACTGTGATGATGATGATGATGATGATGATGATGATGATGAGTCGGAAATCGAATATCAGAGGACAAGCGGGTTTGCAGTATACAAGATTGACCTCGAGTATGGCAACTTTCATGAGGTACAAAATTTGGGGGACCAAATAATATTTTTGGCAGAACATAGCTCTGCCTTGTCCTTTCCTGCAAGTGATTTCAACTTACAAGGAAATTGCATTTATTTTGCAACAAGCGGATACGCAACTATCAACCTACCTCGTAAGACCCTTCTTGGATCAAATATATCTCGTGAAATCGGAATCTTTAGTTTAGATGACGGAAAAATTAAGCGACCGTTTCCAAGTCTTGATGTTGCTGGCATTTCATCACCTAGTCAACTGAGTTGGTTTAGTCCAAGCATTGTGGCTGCTGCCGTTCGTTTTCTCACCTCAGAAGGAATTGGCATTGTGCAGACCTGGAAACAAAAGCTGGACTGTCCTTTGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

516

Amino Acids

58.26

Weight (kDa)

5.55

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 120 - 456 1.1e-37 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 440
AccI GTMKAC 2 cut(s) 915, 1149
AciI CCGC 7 cut(s) 52, 185, 295, 305, 440, 1137, 1296
AclWI GGATC 2 cut(s) 1033, 1345
AcoI YGGCCR 1 cut(s) 919
AcsI RAATTY 2 cut(s) 628, 1192
AfaI GTAC 3 cut(s) 238, 324, 1188
AfiI CCNNNNNNNGG 1 cut(s) 373
AgsI TTSAA 4 cut(s) 79, 430, 907, 1261
AjnI CCWGG 3 cut(s) 62, 724, 1517
AjuI GAANNNNNNNTTGG 2 cut(s) 516, 548
AluBI AGCT 6 cut(s) 287, 397, 738, 860, 1230, 1531
AluI AGCT 6 cut(s) 287, 397, 738, 860, 1230, 1531
Alw21I GWGCWC 2 cut(s) 304, 399
Alw26I GTCTC 3 cut(s) 670, 723, 975
AlwI GGATC 2 cut(s) 1033, 1345
Ama87I CYCGRG 1 cut(s) 1163
AoxI GGCC 1 cut(s) 919
ApeKI GCWGC 4 cut(s) 683, 857, 1469, 1472
ApoI RAATTY 2 cut(s) 628, 1192
ArsI GACNNNNNNTTYG 2 cut(s) 139, 171
AspLEI GCGC 1 cut(s) 857
AspS9I GGNCC 1 cut(s) 1201
AsuHPI GGTGA 3 cut(s) 389, 1422, 1480
AsuII TTCGAA 1 cut(s) 693
AvaI CYCGRG 1 cut(s) 1163
AvaII GGWCC 1 cut(s) 1201
BanII GRGCYC 2 cut(s) 399, 523
BarI GAAGNNNNNNTAC 2 cut(s) 899, 931
BauI CACGAG 1 cut(s) 1350
Bbv12I GWGCWC 2 cut(s) 304, 399
BbvCI CCTCAGC 1 cut(s) 699
BbvI GCAGC 4 cut(s) 670, 869, 1456, 1459
BccI CCATC 3 cut(s) 562, 950, 1050
BceAI ACGGC 4 cut(s) 671, 829, 934, 1460
BciT130I CCWGG 3 cut(s) 64, 726, 1519
BciVI GTATCC 1 cut(s) 1292
BclI TGATCA 2 cut(s) 459, 883
BcoDI GTCTC 3 cut(s) 670, 723, 975
BfaI CTAG 5 cut(s) 516, 575, 587, 654, 1434
BfmI CTRYAG 3 cut(s) 105, 212, 942
BfuI GTATCC 1 cut(s) 1292
BisI GCNGC 5 cut(s) 441, 684, 858, 1470, 1473
BlpI GCTNAGC 1 cut(s) 244
BlsI GCNGC 5 cut(s) 442, 685, 859, 1471, 1474
Bme1390I CCNGG 3 cut(s) 64, 726, 1519
Bme18I GGWCC 1 cut(s) 1201
BmeT110I CYCGRG 1 cut(s) 1163
BmgT120I GGNCC 1 cut(s) 1201
BmiI GGNNCC 1 cut(s) 1202
BmrFI CCNGG 3 cut(s) 64, 726, 1519
BmsI GCATC 2 cut(s) 858, 873
BpmI CTGGAG 1 cut(s) 747
Bpu10I CCTNAGC 1 cut(s) 699
Bpu1102I GCTNAGC 1 cut(s) 244
Bpu14I TTCGAA 1 cut(s) 693
BsaJI CCNNGG 3 cut(s) 249, 314, 412
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bsc4I CCNNNNNNNGG 1 cut(s) 373
Bse3DI GCAATG 1 cut(s) 897
BseBI CCWGG 3 cut(s) 64, 726, 1519
BseDI CCNNGG 3 cut(s) 249, 314, 412
BseLI CCNNNNNNNGG 1 cut(s) 373
BseMI GCAATG 1 cut(s) 897
BseMII CTCAG 5 cut(s) 363, 681, 713, 1433, 1506
BseRI GAGGAG 1 cut(s) 218
BseXI GCAGC 4 cut(s) 670, 869, 1456, 1459
BsgI GTGCAG 1 cut(s) 1532
Bsh1285I CGRYCG 1 cut(s) 1397
BshFI GGCC 1 cut(s) 921
BsiEI CGRYCG 1 cut(s) 1397
BsiHKAI GWGCWC 2 cut(s) 304, 399
BsiHKCI CYCGRG 1 cut(s) 1163
BslFI GGGAC 2 cut(s) 54, 1214
BslI CCNNNNNNNGG 1 cut(s) 373
BsmAI GTCTC 3 cut(s) 670, 723, 975
BsmFI GGGAC 2 cut(s) 54, 1214
BsmI GAATGC 2 cut(s) 588, 677
BsnI GGCC 1 cut(s) 921
BsoBI CYCGRG 1 cut(s) 1163
Bsp119I TTCGAA 1 cut(s) 693
Bsp1286I GDGCHC 3 cut(s) 304, 399, 523
Bsp143I GATC 4 cut(s) 459, 883, 1038, 1337
Bsp1720I GCTNAGC 1 cut(s) 244
Bsp19I CCATGG 1 cut(s) 314
BspACI CCGC 7 cut(s) 52, 185, 295, 305, 440, 1137, 1296
BspANI GGCC 1 cut(s) 921
BspCNI CTCAG 5 cut(s) 364, 680, 712, 1434, 1505
BspHI TCATGA 3 cut(s) 763, 952, 1180
BspLI GGNNCC 1 cut(s) 1202
BspMAI CTGCAG 1 cut(s) 109
BspPI GGATC 2 cut(s) 1033, 1345
BspT104I TTCGAA 1 cut(s) 693
BsrBI CCGCTC 1 cut(s) 440
BsrDI GCAATG 1 cut(s) 897
BssECI CCNNGG 3 cut(s) 249, 314, 412
BssMI GATC 4 cut(s) 459, 883, 1038, 1337
BssNAI GTATAC 1 cut(s) 1150
BssSI CACGAG 1 cut(s) 1350
BssT1I CCWWGG 2 cut(s) 249, 314
Bst1107I GTATAC 1 cut(s) 1150
Bst2BI CACGAG 1 cut(s) 1350
Bst2UI CCWGG 3 cut(s) 64, 726, 1519
Bst4CI ACNGT 6 cut(s) 32, 745, 898, 1073, 1398, 1538
BstAPI GCANNNNNTGC 1 cut(s) 805
BstBI TTCGAA 1 cut(s) 693
BstC8I GCNNGC 5 cut(s) 109, 176, 806, 862, 1420
BstDEI CTNAG 6 cut(s) 244, 372, 667, 699, 1442, 1492
BstDSI CCRYGG 1 cut(s) 314
BstENI CCTNNNNNAGG 1 cut(s) 371
BstHHI GCGC 1 cut(s) 857
BstKTI GATC 4 cut(s) 462, 886, 1041, 1340
BstMAI GTCTC 3 cut(s) 670, 723, 975
BstMBI GATC 4 cut(s) 459, 883, 1038, 1337
BstMCI CGRYCG 1 cut(s) 1397
BstMWI GCNNNNNNNGC 4 cut(s) 184, 403, 805, 861
BstNI CCWGG 3 cut(s) 64, 726, 1519
BstNSI RCATGY 3 cut(s) 262, 623, 808
BstSCI CCNGG 3 cut(s) 62, 724, 1517
BstSFI CTRYAG 3 cut(s) 105, 212, 942
BstV1I GCAGC 4 cut(s) 670, 869, 1456, 1459
BstZ17I GTATAC 1 cut(s) 1150
BsuI GTATCC 1 cut(s) 1292
BsuRI GGCC 1 cut(s) 921
BtgI CCRYGG 1 cut(s) 314
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 2 cut(s) 304, 903
Cac8I GCNNGC 5 cut(s) 109, 176, 806, 862, 1420
CciI TCATGA 3 cut(s) 763, 952, 1180
CfoI GCGC 1 cut(s) 857
Cfr13I GGNCC 1 cut(s) 1201
CsiI ACCWGGT 1 cut(s) 62
Csp6I GTAC 3 cut(s) 237, 323, 1187
CspCI CAANNNNNGTGG 4 cut(s) 879, 914, 1446, 1481
CviQI GTAC 3 cut(s) 237, 323, 1187
DdeI CTNAG 6 cut(s) 244, 372, 667, 699, 1442, 1492
DpnI GATC 4 cut(s) 461, 885, 1040, 1339
DpnII GATC 4 cut(s) 459, 883, 1038, 1337
DraI TTTAAA 1 cut(s) 975
EaeI YGGCCR 1 cut(s) 919
Ecl136II GAGCTC 1 cut(s) 397
Eco130I CCWWGG 2 cut(s) 249, 314
Eco24I GRGCYC 2 cut(s) 399, 523
Eco32I GATATC 1 cut(s) 292
Eco47I GGWCC 1 cut(s) 1201
Eco53kI GAGCTC 1 cut(s) 397
Eco88I CYCGRG 1 cut(s) 1163
EcoICRI GAGCTC 1 cut(s) 397
EcoNI CCTNNNNNAGG 1 cut(s) 371
EcoRII CCWGG 3 cut(s) 62, 724, 1517
EcoRV GATATC 1 cut(s) 292
EcoT14I CCWWGG 2 cut(s) 249, 314
EcoT22I ATGCAT 1 cut(s) 677
EcoT38I GRGCYC 2 cut(s) 399, 523
ErhI CCWWGG 2 cut(s) 249, 314
FalI AAGNNNNNCTT 2 cut(s) 1016, 1048
FaqI GGGAC 2 cut(s) 54, 1214
FauI CCCGC 1 cut(s) 1130
FbaI TGATCA 2 cut(s) 459, 883
FblI GTMKAC 2 cut(s) 915, 1149
Fnu4HI GCNGC 5 cut(s) 441, 684, 858, 1470, 1473
FriOI GRGCYC 2 cut(s) 399, 523
Fsp4HI GCNGC 5 cut(s) 441, 684, 858, 1470, 1473
FspBI CTAG 5 cut(s) 516, 575, 587, 654, 1434
GlaI GCGC 1 cut(s) 856
GluI GCNGC 5 cut(s) 441, 684, 858, 1470, 1473
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 1 cut(s) 921
HhaI GCGC 1 cut(s) 857
Hin6I GCGC 1 cut(s) 855
HinP1I GCGC 1 cut(s) 855
HincII GTYRAC 1 cut(s) 1439
HindII GTYRAC 1 cut(s) 1439
HinfI GANTC 7 cut(s) 208, 408, 480, 760, 1004, 1109, 1362
HphI GGTGA 3 cut(s) 389, 1422, 1480
Hpy166II GTNNAC 9 cut(s) 60, 239, 272, 325, 388, 837, 916, 1150, 1439
Hpy188I TCNGA 8 cut(s) 373, 413, 510, 670, 1114, 1128, 1361, 1495
Hpy188III TCNNGA 7 cut(s) 127, 516, 764, 953, 1181, 1352, 1409
Hpy8I GTNNAC 9 cut(s) 60, 239, 272, 325, 388, 837, 916, 1150, 1439
Hpy99I CGWCG 1 cut(s) 143
HpyAV CCTTC 5 cut(s) 85, 546, 586, 1340, 1490
HpyCH4III ACNGT 6 cut(s) 32, 745, 898, 1073, 1398, 1538
HpyF10VI GCNNNNNNNGC 4 cut(s) 184, 403, 805, 861
HpyF3I CTNAG 6 cut(s) 244, 372, 667, 699, 1442, 1492
HspAI GCGC 1 cut(s) 855
Ksp22I TGATCA 2 cut(s) 459, 883
Kzo9I GATC 4 cut(s) 459, 883, 1038, 1337
LmnI GCTCC 3 cut(s) 307, 394, 402
Lsp1109I GCAGC 4 cut(s) 670, 869, 1456, 1459
LweI GCATC 2 cut(s) 858, 873
MabI ACCWGGT 1 cut(s) 62
MaeI CTAG 5 cut(s) 516, 575, 587, 654, 1434
MaeIII GTNAC 1 cut(s) 32
MalI GATC 4 cut(s) 461, 885, 1040, 1339
MbiI CCGCTC 1 cut(s) 440
MboI GATC 4 cut(s) 459, 883, 1038, 1337
MhlI GDGCHC 3 cut(s) 304, 399, 523
MlyI GAGTC 1 cut(s) 1118
MmeI TCCRAC 2 cut(s) 595, 1092
Mph1103I ATGCAT 1 cut(s) 677
MseI TTAA 7 cut(s) 227, 353, 542, 869, 974, 1061, 1389
MspA1I CMGCKG 1 cut(s) 54
MspR9I CCNGG 3 cut(s) 64, 726, 1519
Mva1269I GAATGC 2 cut(s) 588, 677
MvaI CCWGG 3 cut(s) 64, 726, 1519
MwoI GCNNNNNNNGC 4 cut(s) 184, 403, 805, 861
NcoI CCATGG 1 cut(s) 314
NdeII GATC 4 cut(s) 459, 883, 1038, 1337
NlaIV GGNNCC 1 cut(s) 1202
NmeAIII GCCGAG 1 cut(s) 649
NsiI ATGCAT 1 cut(s) 677
NspI RCATGY 3 cut(s) 262, 623, 808
NspV TTCGAA 1 cut(s) 693
PaeI GCATGC 1 cut(s) 808
PaeR7I CTCGAG 1 cut(s) 1163
PagI TCATGA 3 cut(s) 763, 952, 1180
PctI GAATGC 2 cut(s) 588, 677
PfeI GAWTC 6 cut(s) 208, 408, 480, 760, 1004, 1362
PkrI GCNGC 5 cut(s) 442, 685, 859, 1471, 1474
PleI GAGTC 1 cut(s) 1117
PpsI GAGTC 1 cut(s) 1117
Psp124BI GAGCTC 1 cut(s) 399
Psp6I CCWGG 3 cut(s) 62, 724, 1517
PspGI CCWGG 3 cut(s) 62, 724, 1517
PspN4I GGNNCC 1 cut(s) 1202
PspPI GGNCC 1 cut(s) 1201
PspXI VCTCGAGB 1 cut(s) 1163
PstI CTGCAG 1 cut(s) 109
RsaI GTAC 3 cut(s) 238, 324, 1188
RsaNI GTAC 3 cut(s) 237, 323, 1187
SacI GAGCTC 1 cut(s) 399
SaqAI TTAA 7 cut(s) 227, 353, 542, 869, 974, 1061, 1389
SatI GCNGC 5 cut(s) 441, 684, 858, 1470, 1473
Sau3AI GATC 4 cut(s) 459, 883, 1038, 1337
Sau96I GGNCC 1 cut(s) 1201
SchI GAGTC 1 cut(s) 1118
ScrFI CCNGG 3 cut(s) 64, 726, 1519
SduI GDGCHC 3 cut(s) 304, 399, 523
SexAI ACCWGGT 1 cut(s) 62
SfaNI GCATC 2 cut(s) 858, 873
SfcI CTRYAG 3 cut(s) 105, 212, 942
Sfr274I CTCGAG 1 cut(s) 1163
SfuI TTCGAA 1 cut(s) 693
SinI GGWCC 1 cut(s) 1201
SlaI CTCGAG 1 cut(s) 1163
SmlI CTYRAG 1 cut(s) 1163
SmoI CTYRAG 1 cut(s) 1163
SphI GCATGC 1 cut(s) 808
SsiI CCGC 7 cut(s) 52, 185, 295, 305, 440, 1137, 1296
SspI AATATT 1 cut(s) 1212
SspMI CTAG 5 cut(s) 516, 575, 587, 654, 1434
SstI GAGCTC 1 cut(s) 399
StyD4I CCNGG 3 cut(s) 62, 724, 1517
StyI CCWWGG 2 cut(s) 249, 314
TaaI ACNGT 6 cut(s) 32, 745, 898, 1073, 1398, 1538
TaqI TCGA 6 cut(s) 126, 436, 693, 1053, 1119, 1164
TatI WGTACW 1 cut(s) 322
TauI GCSGC 1 cut(s) 443
TfiI GAWTC 6 cut(s) 208, 408, 480, 760, 1004, 1362
Tru1I TTAA 7 cut(s) 227, 353, 542, 869, 974, 1061, 1389
Tru9I TTAA 7 cut(s) 227, 353, 542, 869, 974, 1061, 1389
TscAI CASTG 2 cut(s) 304, 903
TseI GCWGC 4 cut(s) 683, 857, 1469, 1472
TspDTI ATGAA 4 cut(s) 105, 720, 1169, 1416
TspGWI ACGGA 1 cut(s) 1395
TspRI CASTG 2 cut(s) 304, 903
VpaK11BI GGWCC 1 cut(s) 1201
XagI CCTNNNNNAGG 1 cut(s) 371
XapI RAATTY 2 cut(s) 628, 1192
XbaI TCTAGA 1 cut(s) 515
XceI RCATGY 3 cut(s) 262, 623, 808
XcmI CCANNNNNNNNNTGG 1 cut(s) 929
XhoI CTCGAG 1 cut(s) 1163
XmiI GTMKAC 2 cut(s) 915, 1149
XspI CTAG 5 cut(s) 516, 575, 587, 654, 1434
Zsp2I ATGCAT 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.