Rh6DG034800

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000144
Physical Location & Seq
Forward (+)
3550624 .. 3565663
15040 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG034800.1

Sequence Viewer

Length: 1569 bp
ATGAGTGAGGGGCGTCTGTTTTTCGCAAATGGAAACCTGCGATACTTCCTGGCCTTTGCCAAATCACTATACTTCAAGTTCAAGAAACTACTTGAATACAAGGGAGAGCAAAAGTGCAGTAGCCTCAGTAGTGATTATGGATGCTGGCATGGGTTACCTGAAGAAATCTTGGAAAAAATTGTGCAGAATCTGAGGTTAAGTGATCGAATACGCTTGAGCATCCTTTGCAAGTCTTGGAGGCCAGTTGTTATGAATAGTCCCGCACATGAATTTCCCTGGTTAGTACTTCCTCAATCCCCGGATTGCAGCAATGACAAAACCCTAAGCTTTTTCAGCCTCTCTGATGGCAAAGTTGTCGATTTGAAGCTGCCCAAGCAAGTTCAAGGAGGATGGGTTTATGGATCCTCTAAAGGTTGGCTGATGATGATCAAGGAACAAGGACTAAACTCTCAGATATTTCTACTCAATCCAATTTCAGGGGACCTACACCAGCTTCCATCCTTGGCAACAATTCCATCTTTTCAAAATGGTAAGCTATACGCCTTCATTGCTAGTAAGATTAAGAAAGACATGATTGTAGCTCGGACCTTAAGATCTGGAGATCATGCACTGGAACTTGTGATGGTCTATGTTGGTAAAATCGAACCGATTGAAGAGATTGAAGGACCTGGAGGCAATTCATGGAGTGTCTTTCGTCCTTTAGATCTTGAACACGACTGTGGCGCGCACGCCCTTGCCAAATTATTATTTTCCAGTGGTAAGCTATACGCCTTGATTGGTGGTGATATTGAGAAAGAAAGGATTGTAGCTCGGACCTTAAGATTTGGAGATCATGCACTGGAACTGATGATGGTCTATGTTGATGTAAACCGTACAGCCGAACTACTAGGGGAGAATGTGGAGACTGAGGAGCACAATGACCACACAGTCTACTTACAATGTCTAATTAGCTCATTCTTCGTAGAATCAACCAACGAAGAAGTCCTACTGATCTATAAAGTGGACGACAAGTTTATAATGGGAAACAATGATGCCGACGAGGATGAGGAAGAGGACATTCTTGAAGGCGTGGATGAAGGCAATGACAGTGAAGAAGAAGACATTCTTGATCAAGACGAGGATGAAGGCAATGACATGGAAGAAGAGGGCAATTATGATGAAGGAGATGATAATGAGAATGATGGGGATGAAGAAGAAGGTGAAGGTCATGATGAATACAACGATTGGGATCAGTCCATGTATGCAAGGACAAGCAGCTTTGATGTATTTAAGATTGACTCCAAGATTGAAGGAAACAATTTTTGTACTAGGGTACAAAGTTTGGGAGACCAAATGGTTTTTTTGGCCAAGCATGGTGCTTTGTCTATCTCTGCAACCGACCTTAAAGAATCCGAAAAGAATTGCATTTATTTTGCAACAAATGGAACAACGACACCTGTAATTTCAAGACCACGTATATCTCATGAGATTGGTGTCTTCTACTTAGATACCGGTAAGATTAAGAAATCTTTTCCAAGCATCAACTTTTCAACTCGGTCTCGAACAAGTTGGTATATTCCAAGTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

522

Amino Acids

59.02

Weight (kDa)

4.63

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 49 - 85 6.2e-08 F-box domain
Beta-prop_KIB1-4 PF03478 110 - 493 1.2e-26 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1016
AasI GACNNNNNNGTC 1 cut(s) 926
Acc36I ACCTGC 1 cut(s) 45
AccI GTMKAC 1 cut(s) 930
AccII CGCG 1 cut(s) 725
AciI CCGC 1 cut(s) 261
AclWI GGATC 3 cut(s) 396, 409, 1236
AcoI YGGCCR 1 cut(s) 1344
AcsI RAATTY 1 cut(s) 269
AcuI CTGAAG 1 cut(s) 180
AcyI GRCGYC 1 cut(s) 13
AfaI GTAC 4 cut(s) 285, 874, 1306, 1314
AfiI CCNNNNNNNGG 1 cut(s) 476
AflII CTTAAG 2 cut(s) 589, 817
AgeI ACCGGT 1 cut(s) 1490
AjnI CCWGG 3 cut(s) 48, 275, 667
AleI CACNNNNGTG 1 cut(s) 717
AluBI AGCT 9 cut(s) 327, 367, 493, 535, 581, 763, 809, 951, 1257
AluI AGCT 9 cut(s) 327, 367, 493, 535, 581, 763, 809, 951, 1257
Alw21I GWGCWC 1 cut(s) 915
Alw26I GTCTC 3 cut(s) 896, 1320, 1542
AlwI GGATC 3 cut(s) 396, 409, 1236
AlwNI CAGNNNCTG 1 cut(s) 190
AoxI GGCC 3 cut(s) 51, 239, 1344
ApeKI GCWGC 3 cut(s) 306, 367, 1254
ApoI RAATTY 1 cut(s) 269
AsiGI ACCGGT 1 cut(s) 1490
Asp700I GAANNNNTTC 1 cut(s) 1101
AspLEI GCGC 2 cut(s) 725, 727
AspS9I GGNCC 4 cut(s) 481, 585, 665, 813
AsuC2I CCSGG 1 cut(s) 299
AsuHPI GGTGA 2 cut(s) 794, 1211
AvaII GGWCC 4 cut(s) 481, 585, 665, 813
BalI TGGCCA 1 cut(s) 1346
BamHI GGATCC 1 cut(s) 401
BarI GAAGNNNNNNTAC 2 cut(s) 969, 1001
BbsI GAAGAC 2 cut(s) 1104, 1468
Bbv12I GWGCWC 1 cut(s) 915
BbvI GCAGC 3 cut(s) 318, 354, 1266
BccI CCATC 7 cut(s) 338, 384, 505, 523, 616, 844, 1175
BcgI CGANNNNNNTGC 2 cut(s) 337, 371
BciT130I CCWGG 3 cut(s) 50, 277, 669
BclI TGATCA 2 cut(s) 426, 1108
BcnI CCSGG 1 cut(s) 299
BcoDI GTCTC 3 cut(s) 896, 1320, 1542
BfaI CTAG 3 cut(s) 552, 887, 1308
BfrI CTTAAG 2 cut(s) 589, 817
BfuAI ACCTGC 1 cut(s) 45
BglII AGATCT 2 cut(s) 593, 703
BisI GCNGC 3 cut(s) 307, 368, 1255
BlsI GCNGC 3 cut(s) 308, 369, 1256
BmcAI AGTACT 1 cut(s) 285
Bme1390I CCNGG 4 cut(s) 50, 277, 299, 669
Bme18I GGWCC 4 cut(s) 481, 585, 665, 813
BmgT120I GGNCC 4 cut(s) 481, 585, 665, 813
BmiI GGNNCC 2 cut(s) 403, 482
BmrFI CCNGG 4 cut(s) 50, 277, 299, 669
BmsI GCATC 4 cut(s) 131, 228, 1021, 1527
BpiI GAAGAC 2 cut(s) 1104, 1468
BpmI CTGGAG 2 cut(s) 618, 690
Bpu10I CCTNAGC 1 cut(s) 323
BpuEI CTTGAG 1 cut(s) 235
BpuMI CCSGG 1 cut(s) 299
BsaAI YACGTR 1 cut(s) 1454
BsaBI GATNNNNATC 2 cut(s) 425, 1227
BsaHI GRCGYC 1 cut(s) 13
BsaI GGTCTC 2 cut(s) 1320, 1542
BsaJI CCNNGG 3 cut(s) 275, 297, 501
BsaWI WCCGGW 1 cut(s) 1490
BsaXI ACNNNNNCTCC 2 cut(s) 378, 408
Bsc4I CCNNNNNNNGG 1 cut(s) 476
Bse118I RCCGGY 1 cut(s) 1490
Bse1I ACTGG 4 cut(s) 242, 615, 753, 843
Bse3DI GCAATG 4 cut(s) 316, 546, 1087, 1135
Bse8I GATNNNNATC 2 cut(s) 425, 1227
BseBI CCWGG 3 cut(s) 50, 277, 669
BseDI CCNNGG 3 cut(s) 275, 297, 501
BseGI GGATG 8 cut(s) 146, 219, 395, 497, 1048, 1078, 1126, 1192
BseJI GATNNNNATC 2 cut(s) 425, 1227
BseLI CCNNNNNNNGG 1 cut(s) 476
BseMI GCAATG 4 cut(s) 316, 546, 1087, 1135
BseMII CTCAG 4 cut(s) 139, 182, 464, 897
BseNI ACTGG 4 cut(s) 242, 615, 753, 843
BsePI GCGCGC 1 cut(s) 723
BseRI GAGGAG 1 cut(s) 923
BseXI GCAGC 3 cut(s) 318, 354, 1266
BsgI GTGCAG 2 cut(s) 136, 203
Bsh1236I CGCG 1 cut(s) 725
BshFI GGCC 3 cut(s) 53, 241, 1346
BshTI ACCGGT 1 cut(s) 1490
BsiHKAI GWGCWC 1 cut(s) 915
BsiSI CCGG 2 cut(s) 299, 1491
BslFI GGGAC 2 cut(s) 243, 494
BslI CCNNNNNNNGG 1 cut(s) 476
BsmAI GTCTC 3 cut(s) 896, 1320, 1542
BsmFI GGGAC 2 cut(s) 243, 494
BsnI GGCC 3 cut(s) 53, 241, 1346
Bso31I GGTCTC 2 cut(s) 1320, 1542
Bsp1286I GDGCHC 1 cut(s) 915
BspACI CCGC 1 cut(s) 261
BspANI GGCC 3 cut(s) 53, 241, 1346
BspCNI CTCAG 4 cut(s) 138, 183, 463, 898
BspFNI CGCG 1 cut(s) 725
BspHI TCATGA 2 cut(s) 1207, 1462
BspLI GGNNCC 2 cut(s) 403, 482
BspMI ACCTGC 1 cut(s) 45
BspPI GGATC 3 cut(s) 396, 409, 1236
BspTI CTTAAG 2 cut(s) 589, 817
BspTNI GGTCTC 2 cut(s) 1320, 1542
BsrDI GCAATG 4 cut(s) 316, 546, 1087, 1135
BsrFI RCCGGY 1 cut(s) 1490
BsrI ACTGG 4 cut(s) 242, 615, 753, 843
BssAI RCCGGY 1 cut(s) 1490
BssECI CCNNGG 3 cut(s) 275, 297, 501
BssHII GCGCGC 1 cut(s) 723
BssNI GRCGYC 1 cut(s) 13
BssT1I CCWWGG 1 cut(s) 501
Bst2UI CCWGG 3 cut(s) 50, 277, 669
Bst4CI ACNGT 4 cut(s) 719, 872, 928, 1088
Bst6I CTCTTC 3 cut(s) 648, 1044, 1137
BstACI GRCGYC 1 cut(s) 13
BstAFI CTTAAG 2 cut(s) 589, 817
BstAPI GCANNNNNTGC 1 cut(s) 225
BstBAI YACGTR 1 cut(s) 1454
BstC8I GCNNGC 3 cut(s) 146, 725, 729
BstDEI CTNAG 6 cut(s) 125, 191, 323, 450, 906, 1483
BstEII GGTNACC 1 cut(s) 153
BstF5I GGATG 8 cut(s) 146, 219, 395, 497, 1048, 1078, 1126, 1192
BstFNI CGCG 1 cut(s) 725
BstHHI GCGC 2 cut(s) 725, 727
BstMAI GTCTC 3 cut(s) 896, 1320, 1542
BstMWI GCNNNNNNNGC 4 cut(s) 225, 333, 373, 548
BstNI CCWGG 3 cut(s) 50, 277, 669
BstPI GGTNACC 1 cut(s) 153
BstSCI CCNGG 4 cut(s) 48, 275, 297, 667
BstUI CGCG 1 cut(s) 725
BstV1I GCAGC 3 cut(s) 318, 354, 1266
BstV2I GAAGAC 2 cut(s) 1104, 1468
BstX2I RGATCY 3 cut(s) 401, 593, 703
BstYI RGATCY 3 cut(s) 401, 593, 703
BsuRI GGCC 3 cut(s) 53, 241, 1346
BtsCI GGATG 8 cut(s) 146, 219, 395, 497, 1048, 1078, 1126, 1192
BtsIMutI CAGTG 4 cut(s) 608, 760, 836, 1093
BveI ACCTGC 1 cut(s) 45
Cac8I GCNNGC 3 cut(s) 146, 725, 729
CaiI CAGNNNCTG 1 cut(s) 190
CciI TCATGA 2 cut(s) 1207, 1462
CfoI GCGC 2 cut(s) 725, 727
Cfr10I RCCGGY 1 cut(s) 1490
Cfr13I GGNCC 4 cut(s) 481, 585, 665, 813
CseI GACGC 1 cut(s) 2
Csp6I GTAC 4 cut(s) 284, 873, 1305, 1313
CspAI ACCGGT 1 cut(s) 1490
CviQI GTAC 4 cut(s) 284, 873, 1305, 1313
DdeI CTNAG 6 cut(s) 125, 191, 323, 450, 906, 1483
DrdI GACNNNNNNGTC 1 cut(s) 926
DseDI GACNNNNNNGTC 1 cut(s) 926
EaeI YGGCCR 1 cut(s) 1344
Eam1104I CTCTTC 3 cut(s) 648, 1044, 1137
EarI CTCTTC 3 cut(s) 648, 1044, 1137
Eco130I CCWWGG 1 cut(s) 501
Eco31I GGTCTC 2 cut(s) 1320, 1542
Eco47I GGWCC 4 cut(s) 481, 585, 665, 813
Eco57I CTGAAG 1 cut(s) 180
Eco91I GGTNACC 1 cut(s) 153
EcoO109I RGGNCCY 2 cut(s) 481, 665
EcoO65I GGTNACC 1 cut(s) 153
EcoRII CCWGG 3 cut(s) 48, 275, 667
EcoT14I CCWWGG 1 cut(s) 501
ErhI CCWWGG 1 cut(s) 501
FalI AAGNNNNNCTT 2 cut(s) 1089, 1121
FaqI GGGAC 2 cut(s) 243, 494
FauI CCCGC 1 cut(s) 268
FbaI TGATCA 2 cut(s) 426, 1108
FblI GTMKAC 1 cut(s) 930
Fnu4HI GCNGC 3 cut(s) 307, 368, 1255
FokI GGATG 8 cut(s) 153, 206, 402, 484, 1055, 1085, 1133, 1199
Fsp4HI GCNGC 3 cut(s) 307, 368, 1255
FspBI CTAG 3 cut(s) 552, 887, 1308
GlaI GCGC 2 cut(s) 724, 726
GluI GCNGC 3 cut(s) 307, 368, 1255
GsuI CTGGAG 2 cut(s) 618, 690
HaeIII GGCC 3 cut(s) 53, 241, 1346
HapII CCGG 2 cut(s) 299, 1491
HgaI GACGC 1 cut(s) 2
HhaI GCGC 2 cut(s) 725, 727
Hin1I GRCGYC 1 cut(s) 13
Hin6I GCGC 2 cut(s) 723, 725
HinP1I GCGC 2 cut(s) 723, 725
HindIII AAGCTT 1 cut(s) 325
HinfI GANTC 4 cut(s) 187, 965, 1277, 1388
HpaII CCGG 2 cut(s) 299, 1491
HphI GGTGA 2 cut(s) 794, 1211
Hpy166II GTNNAC 3 cut(s) 868, 931, 1003
Hpy188I TCNGA 6 cut(s) 192, 343, 453, 585, 813, 1393
Hpy8I GTNNAC 3 cut(s) 868, 931, 1003
Hpy99I CGWCG 1 cut(s) 1040
HpyAV CCTTC 9 cut(s) 553, 656, 1058, 1070, 1118, 1154, 1190, 1196, 1283
HpyCH4III ACNGT 4 cut(s) 719, 872, 928, 1088
HpyCH4IV ACGT 1 cut(s) 1453
HpyF10VI GCNNNNNNNGC 4 cut(s) 225, 333, 373, 548
HpyF3I CTNAG 6 cut(s) 125, 191, 323, 450, 906, 1483
HpySE526I ACGT 1 cut(s) 1453
Hsp92I GRCGYC 1 cut(s) 13
HspAI GCGC 2 cut(s) 723, 725
Ksp22I TGATCA 2 cut(s) 426, 1108
LmnI GCTCC 1 cut(s) 910
Lsp1109I GCAGC 3 cut(s) 318, 354, 1266
LweI GCATC 4 cut(s) 131, 228, 1021, 1527
MaeI CTAG 3 cut(s) 552, 887, 1308
MaeII ACGT 1 cut(s) 1453
MaeIII GTNAC 1 cut(s) 153
MflI RGATCY 3 cut(s) 401, 593, 703
MhlI GDGCHC 1 cut(s) 915
MlsI TGGCCA 1 cut(s) 1346
MluNI TGGCCA 1 cut(s) 1346
MlyI GAGTC 1 cut(s) 1271
Mox20I TGGCCA 1 cut(s) 1346
MroXI GAANNNNTTC 1 cut(s) 1101
MscI TGGCCA 1 cut(s) 1346
MseI TTAA 7 cut(s) 197, 561, 590, 818, 1269, 1383, 1500
MslI CAYNNNNRTG 1 cut(s) 717
Msp20I TGGCCA 1 cut(s) 1346
MspCI CTTAAG 2 cut(s) 589, 817
MspI CCGG 2 cut(s) 299, 1491
MspR9I CCNGG 4 cut(s) 50, 277, 299, 669
MvaI CCWGG 3 cut(s) 50, 277, 669
MvnI CGCG 1 cut(s) 725
MwoI GCNNNNNNNGC 4 cut(s) 225, 333, 373, 548
NciI CCSGG 1 cut(s) 299
NlaIV GGNNCC 2 cut(s) 403, 482
OliI CACNNNNGTG 1 cut(s) 717
PagI TCATGA 2 cut(s) 1207, 1462
PauI GCGCGC 1 cut(s) 723
PdmI GAANNNNTTC 1 cut(s) 1101
PfeI GAWTC 3 cut(s) 187, 965, 1388
PinAI ACCGGT 1 cut(s) 1490
PkrI GCNGC 3 cut(s) 308, 369, 1256
PleI GAGTC 1 cut(s) 1271
PpsI GAGTC 1 cut(s) 1271
Ppu21I YACGTR 1 cut(s) 1454
PpuMI RGGWCCY 2 cut(s) 481, 665
PsiI TTATAA 1 cut(s) 1016
Psp5II RGGWCCY 2 cut(s) 481, 665
Psp6I CCWGG 3 cut(s) 48, 275, 667
PspEI GGTNACC 1 cut(s) 153
PspGI CCWGG 3 cut(s) 48, 275, 667
PspN4I GGNNCC 2 cut(s) 403, 482
PspPI GGNCC 4 cut(s) 481, 585, 665, 813
PspPPI RGGWCCY 2 cut(s) 481, 665
PstNI CAGNNNCTG 1 cut(s) 190
PsuI RGATCY 3 cut(s) 401, 593, 703
PteI GCGCGC 1 cut(s) 723
RsaI GTAC 4 cut(s) 285, 874, 1306, 1314
RsaNI GTAC 4 cut(s) 284, 873, 1305, 1313
RseI CAYNNNNRTG 1 cut(s) 717
SaqAI TTAA 7 cut(s) 197, 561, 590, 818, 1269, 1383, 1500
SatI GCNGC 3 cut(s) 307, 368, 1255
Sau96I GGNCC 4 cut(s) 481, 585, 665, 813
ScaI AGTACT 1 cut(s) 285
SchI GAGTC 1 cut(s) 1271
ScrFI CCNGG 4 cut(s) 50, 277, 299, 669
SduI GDGCHC 1 cut(s) 915
SfaNI GCATC 4 cut(s) 131, 228, 1021, 1527
SinI GGWCC 4 cut(s) 481, 585, 665, 813
SmiMI CAYNNNNRTG 1 cut(s) 717
SmlI CTYRAG 3 cut(s) 214, 589, 817
SmoI CTYRAG 3 cut(s) 214, 589, 817
SsiI CCGC 1 cut(s) 261
SspMI CTAG 3 cut(s) 552, 887, 1308
StyD4I CCNGG 4 cut(s) 48, 275, 297, 667
StyI CCWWGG 1 cut(s) 501
TaaI ACNGT 4 cut(s) 719, 872, 928, 1088
TaiI ACGT 1 cut(s) 1456
TaqI TCGA 4 cut(s) 205, 357, 642, 1540
TaqII GACCGA 1 cut(s) 1524
TatI WGTACW 2 cut(s) 283, 1304
TfiI GAWTC 3 cut(s) 187, 965, 1388
Tru1I TTAA 7 cut(s) 197, 561, 590, 818, 1269, 1383, 1500
Tru9I TTAA 7 cut(s) 197, 561, 590, 818, 1269, 1383, 1500
TscAI CASTG 4 cut(s) 615, 760, 843, 1093
TseI GCWGC 3 cut(s) 306, 367, 1254
TspDTI ATGAA 9 cut(s) 266, 282, 535, 669, 1089, 1137, 1173, 1203, 1227
TspRI CASTG 4 cut(s) 615, 760, 843, 1093
Vha464I CTTAAG 2 cut(s) 589, 817
VpaK11BI GGWCC 4 cut(s) 481, 585, 665, 813
XapI RAATTY 1 cut(s) 269
XmiI GTMKAC 1 cut(s) 930
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 3 cut(s) 552, 887, 1308
ZrmI AGTACT 1 cut(s) 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.