FvH4_2g06581

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000144
Physical Location & Seq
Forward (+)
5456235 .. 5462253
6019 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g06581.t1

Sequence Viewer

Length: 1470 bp
ATGGTTGCGGCAGTGGCAGTGGCGGATTCGTTGATGAAAGTCCCGGCTGGATTCATGCAACGTTGTGGCACAGTCGAGGCATCAGGCAATGACGATGATAACGACGACCCTGATGACGACGTCGGTAGTGCTAGTGTTGGTGGCTTGGACAACAACATCGTGGAGCTACCTGCGACCGCACAGAGTGTTGGTTTCTTGGCAGTAATTGTGTTGGGGTTGGTGGCTTCAGTGGCTCTCGGGGCAGTGGGGAGGATAGCTGGACTCGAGGAAACTAGTCCGTCCTGCCTCCACCTCGAGGTCGCTTGTTTCTCCACTCGATTTAGGTCAAAACTGCAACAACACCGGGGCCAAGGGGAGAGTAACCAAGGCGAGTGCATGGCGTGGTTTTTTTCCCACCTCTTGGTCAACCTCTCCTCTCTGTTGCTTTGCACACTGGCGACTTTTGCTGGAGATGGGAAGGGTTCCACCTCTCTAATCTGTACTTGCCAGCGCTCTTTGGCGAAGAGAGGTGCCAAAGACATTATTGACAATAGCCCCAGCATCATCTTCTATGGGAGCTTGGGTGAAATTTTGATATGTGAGCCGTTGCCTGGTTGGTTAAGGATGTTAACTAATAACTTTGAGGCCATGGGTTCAAACCTCACTGACATATGTAGGAGGAGGGAGAAGGTGTTCGGCCTGTTAGAGTTTAGCGCAAGAAAACTCCATGGCATGCTGGAGGCTCTCCCGTGGCGGAGGTCTGGTGCCCAAACCCTAGGCAAGGAAAAACAAATCGAGAATGGCAACGACGACCAATTTACTTGTCATGGGTCAGCCGAGTGCTGGCAGTCACCGCCACAAGACAACATGGAGGAGATTCTACAGAAAATGGGTTTAATCGCTCGTACTCGCTTAGTCAATGTCTGCATGTCTTGGAGCTCACTTGTTAAGAGAGCTGACATCCGCAGTGCTCATCATCTGCCATGGTTAGTTCACCCTCAAACCCTAAACACCGACTACTTAACCTTTTCGAGCCTCTGTGAGGGTGAACTTAAGGAATTGGCATTGTGCAGACCTGGAGACAAAACCTGGACAGTTTTTGAGATTTTGAATACTGAGGACGACCATCTCATGGATTTACTCTTTTCGGGGGGCATGCTATACGGCATAGTTGATAATGTTACAAACGGTCATAACACAAAGAATGGCATAGGCGCAGCTCGCATCCTAAACTTTGGAGATGATCACACAATGAGAGTGGAATTGAAGTTGGTGTATGGCCATAAAGAAGTTGGTTATACGACCGAAAACATAGCTCTTCCTTTGCCTTTGCGGCAAGTGATTTCAAACTACAAGGAAATTGCATCTATTTTGCAACAAGCGGATATGACCCAACCTACCTACCTCGATGTTAAGAATCTGTATACAGCCATAACTTCAGCAGCAATAGAGCTTGATAACAGCCATAACTTCAGCAGCAATAGAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

490

Amino Acids

53.49

Weight (kDa)

5.28

Isoelectric Point (pI)

45.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 123
AbsI CCTCGAGG 1 cut(s) 293
Acc36I ACCTGC 1 cut(s) 178
AccB1I GGYRCC 2 cut(s) 509, 743
AccB7I CCANNNNNTGG 2 cut(s) 400, 1111
AccI GTMKAC 1 cut(s) 1403
AciI CCGC 8 cut(s) 8, 23, 177, 733, 833, 943, 1312, 1361
AclI AACGTT 1 cut(s) 61
AcoI YGGCCR 1 cut(s) 1258
AcsI RAATTY 1 cut(s) 567
AcuI CTGAAG 3 cut(s) 210, 1401, 1435
AcyI GRCGYC 1 cut(s) 120
AdeI CACNNNGTG 1 cut(s) 185
AfaI GTAC 2 cut(s) 481, 886
AfeI AGCGCT 1 cut(s) 491
AfiI CCNNNNNNNGG 7 cut(s) 295, 400, 590, 760, 822, 1021, 1111
AflII CTTAAG 1 cut(s) 1031
AgsI TTSAA 4 cut(s) 636, 1090, 1246, 1326
AhlI ACTAGT 1 cut(s) 272
AjnI CCWGG 3 cut(s) 589, 1054, 1067
AloI GAACNNNNNNTCC 2 cut(s) 656, 688
AluBI AGCT 9 cut(s) 166, 257, 558, 918, 935, 1199, 1295, 1432, 1466
AluI AGCT 9 cut(s) 166, 257, 558, 918, 935, 1199, 1295, 1432, 1466
Alw21I GWGCWC 2 cut(s) 920, 952
Alw26I GTCTC 1 cut(s) 1053
Ama87I CYCGRG 3 cut(s) 236, 263, 293
Aor51HI AGCGCT 1 cut(s) 491
AoxI GGCC 4 cut(s) 346, 624, 676, 1258
ApeKI GCWGC 3 cut(s) 1196, 1421, 1455
ApoI RAATTY 1 cut(s) 567
Asp700I GAANNNNTTC 1 cut(s) 671
AspA2I CCTAGG 1 cut(s) 754
AspLEI GCGC 3 cut(s) 492, 695, 1196
AspS9I GGNCC 1 cut(s) 346
AsuC2I CCSGG 2 cut(s) 44, 344
AsuHPI GGTGA 4 cut(s) 575, 822, 965, 1037
AvaI CYCGRG 3 cut(s) 236, 263, 293
AvrII CCTAGG 1 cut(s) 754
BaeGI GKGCMC 1 cut(s) 748
BalI TGGCCA 1 cut(s) 1260
BanI GGYRCC 2 cut(s) 509, 743
BanII GRGCYC 1 cut(s) 920
Bbv12I GWGCWC 2 cut(s) 920, 952
BbvI GCAGC 2 cut(s) 1208, 1433
BccI CCATC 2 cut(s) 446, 1113
BceAI ACGGC 2 cut(s) 568, 1159
BciT130I CCWGG 3 cut(s) 591, 1056, 1069
BclI TGATCA 1 cut(s) 1222
BcnI CCSGG 2 cut(s) 44, 344
BcoDI GTCTC 1 cut(s) 1053
BcuI ACTAGT 1 cut(s) 272
BfaI CTAG 3 cut(s) 132, 273, 755
BfmI CTRYAG 1 cut(s) 860
BfoI RGCGCY 1 cut(s) 493
BfrI CTTAAG 1 cut(s) 1031
BfuAI ACCTGC 1 cut(s) 178
BglI GCCNNNNNGGC 1 cut(s) 1312
BisI GCNGC 5 cut(s) 9, 1197, 1313, 1422, 1456
BlnI CCTAGG 1 cut(s) 754
BlsI GCNGC 5 cut(s) 10, 1198, 1314, 1423, 1457
Bme1390I CCNGG 5 cut(s) 44, 344, 591, 1056, 1069
BmeT110I CYCGRG 3 cut(s) 236, 263, 293
BmgT120I GGNCC 1 cut(s) 346
BmiI GGNNCC 4 cut(s) 347, 463, 511, 745
BmrFI CCNGG 5 cut(s) 44, 344, 591, 1056, 1069
BmsI GCATC 4 cut(s) 89, 549, 1212, 1352
BpmI CTGGAG 3 cut(s) 468, 737, 1077
BpuMI CCSGG 2 cut(s) 44, 344
BsaHI GRCGYC 1 cut(s) 120
BsaJI CCNNGG 8 cut(s) 343, 349, 364, 627, 706, 728, 754, 962
BsaXI ACNNNNNCTCC 6 cut(s) 547, 577, 656, 686, 727, 757
Bsc4I CCNNNNNNNGG 7 cut(s) 295, 400, 590, 760, 822, 1021, 1111
Bse1I ACTGG 1 cut(s) 438
Bse3DI GCAATG 1 cut(s) 94
BseBI CCWGG 3 cut(s) 591, 1056, 1069
BseDI CCNNGG 8 cut(s) 343, 349, 364, 627, 706, 728, 754, 962
BseGI GGATG 3 cut(s) 609, 939, 1203
BseLI CCNNNNNNNGG 7 cut(s) 295, 400, 590, 760, 822, 1021, 1111
BseMI GCAATG 1 cut(s) 94
BseMII CTCAG 1 cut(s) 1086
BseNI ACTGG 1 cut(s) 438
BseRI GAGGAG 3 cut(s) 403, 673, 866
BseSI GKGCMC 1 cut(s) 748
BseXI GCAGC 2 cut(s) 1208, 1433
BseYI CCCAGC 1 cut(s) 536
BsgI GTGCAG 1 cut(s) 1069
Bsh1285I CGRYCG 2 cut(s) 177, 1284
BshFI GGCC 4 cut(s) 348, 626, 678, 1260
BshNI GGYRCC 2 cut(s) 509, 743
BsiEI CGRYCG 2 cut(s) 177, 1284
BsiHKAI GWGCWC 2 cut(s) 920, 952
BsiHKCI CYCGRG 3 cut(s) 236, 263, 293
BsiSI CCGG 2 cut(s) 44, 343
BslFI GGGAC 1 cut(s) 26
BslI CCNNNNNNNGG 7 cut(s) 295, 400, 590, 760, 822, 1021, 1111
BsmAI GTCTC 1 cut(s) 1053
BsmFI GGGAC 1 cut(s) 26
BsnI GGCC 4 cut(s) 348, 626, 678, 1260
BsoBI CYCGRG 3 cut(s) 236, 263, 293
Bsp1286I GDGCHC 3 cut(s) 748, 920, 952
Bsp143I GATC 1 cut(s) 1222
Bsp19I CCATGG 3 cut(s) 627, 706, 962
BspACI CCGC 8 cut(s) 8, 23, 177, 733, 833, 943, 1312, 1361
BspANI GGCC 4 cut(s) 348, 626, 678, 1260
BspCNI CTCAG 1 cut(s) 1087
BspLI GGNNCC 4 cut(s) 347, 463, 511, 745
BspMI ACCTGC 1 cut(s) 178
BspQI GCTCTTC 1 cut(s) 1302
BspT107I GGYRCC 2 cut(s) 509, 743
BspTI CTTAAG 1 cut(s) 1031
BsrDI GCAATG 1 cut(s) 94
BsrI ACTGG 1 cut(s) 438
BssECI CCNNGG 8 cut(s) 343, 349, 364, 627, 706, 728, 754, 962
BssMI GATC 1 cut(s) 1222
BssNAI GTATAC 1 cut(s) 1404
BssNI GRCGYC 1 cut(s) 120
BssT1I CCWWGG 6 cut(s) 349, 364, 627, 706, 754, 962
Bst1107I GTATAC 1 cut(s) 1404
Bst2UI CCWGG 3 cut(s) 591, 1056, 1069
Bst4CI ACNGT 3 cut(s) 73, 1075, 1169
Bst6I CTCTTC 2 cut(s) 497, 1302
BstACI GRCGYC 1 cut(s) 120
BstAFI CTTAAG 1 cut(s) 1031
BstC8I GCNNGC 5 cut(s) 488, 713, 824, 1136, 1201
BstDEI CTNAG 3 cut(s) 892, 1095, 1467
BstDSI CCRYGG 4 cut(s) 627, 706, 728, 962
BstENI CCTNNNNNAGG 2 cut(s) 758, 1019
BstF5I GGATG 3 cut(s) 609, 939, 1203
BstH2I RGCGCY 1 cut(s) 493
BstHHI GCGC 3 cut(s) 492, 695, 1196
BstKTI GATC 1 cut(s) 1225
BstMAI GTCTC 1 cut(s) 1053
BstMBI GATC 1 cut(s) 1222
BstMCI CGRYCG 2 cut(s) 177, 1284
BstMWI GCNNNNNNNGC 7 cut(s) 14, 230, 239, 443, 832, 1200, 1312
BstNI CCWGG 3 cut(s) 591, 1056, 1069
BstNSI RCATGY 3 cut(s) 715, 910, 1138
BstSCI CCNGG 5 cut(s) 42, 342, 589, 1054, 1067
BstSFI CTRYAG 1 cut(s) 860
BstSLI GKGCMC 1 cut(s) 748
BstV1I GCAGC 2 cut(s) 1208, 1433
BstZ17I GTATAC 1 cut(s) 1404
BsuRI GGCC 4 cut(s) 348, 626, 678, 1260
BtgI CCRYGG 4 cut(s) 627, 706, 728, 962
BtsCI GGATG 3 cut(s) 609, 939, 1203
BtsI GCAGTG 4 cut(s) 18, 24, 249, 952
BtsIMutI CAGTG 7 cut(s) 18, 24, 234, 249, 431, 642, 952
BveI ACCTGC 1 cut(s) 178
Cac8I GCNNGC 5 cut(s) 488, 713, 824, 1136, 1201
CfoI GCGC 3 cut(s) 492, 695, 1196
Cfr13I GGNCC 1 cut(s) 346
Csp6I GTAC 2 cut(s) 480, 885
CspCI CAANNNNNGTGG 2 cut(s) 1218, 1253
CviQI GTAC 2 cut(s) 480, 885
DdeI CTNAG 3 cut(s) 892, 1095, 1467
DpnI GATC 1 cut(s) 1224
DpnII GATC 1 cut(s) 1222
DraIII CACNNNGTG 1 cut(s) 185
EaeI YGGCCR 1 cut(s) 1258
Eam1104I CTCTTC 2 cut(s) 497, 1302
EarI CTCTTC 2 cut(s) 497, 1302
EciI GGCGGA 2 cut(s) 38, 748
Ecl136II GAGCTC 1 cut(s) 918
Eco130I CCWWGG 6 cut(s) 349, 364, 627, 706, 754, 962
Eco24I GRGCYC 1 cut(s) 920
Eco47III AGCGCT 1 cut(s) 491
Eco53kI GAGCTC 1 cut(s) 918
Eco57I CTGAAG 3 cut(s) 210, 1401, 1435
Eco88I CYCGRG 3 cut(s) 236, 263, 293
EcoICRI GAGCTC 1 cut(s) 918
EcoNI CCTNNNNNAGG 2 cut(s) 758, 1019
EcoRII CCWGG 3 cut(s) 589, 1054, 1067
EcoT14I CCWWGG 6 cut(s) 349, 364, 627, 706, 754, 962
EcoT38I GRGCYC 1 cut(s) 920
ErhI CCWWGG 6 cut(s) 349, 364, 627, 706, 754, 962
FaqI GGGAC 1 cut(s) 26
FauNDI CATATG 1 cut(s) 650
FbaI TGATCA 1 cut(s) 1222
FblI GTMKAC 1 cut(s) 1403
Fnu4HI GCNGC 5 cut(s) 9, 1197, 1313, 1422, 1456
FokI GGATG 3 cut(s) 616, 926, 1190
FriOI GRGCYC 1 cut(s) 920
Fsp4HI GCNGC 5 cut(s) 9, 1197, 1313, 1422, 1456
FspBI CTAG 3 cut(s) 132, 273, 755
GlaI GCGC 3 cut(s) 491, 694, 1195
GluI GCNGC 5 cut(s) 9, 1197, 1313, 1422, 1456
GsaI CCCAGC 1 cut(s) 540
GsuI CTGGAG 3 cut(s) 468, 737, 1077
HaeII RGCGCY 1 cut(s) 493
HaeIII GGCC 4 cut(s) 348, 626, 678, 1260
HapII CCGG 2 cut(s) 44, 343
HhaI GCGC 3 cut(s) 492, 695, 1196
Hin1I GRCGYC 1 cut(s) 120
Hin6I GCGC 3 cut(s) 490, 693, 1194
HinP1I GCGC 3 cut(s) 490, 693, 1194
HincII GTYRAC 2 cut(s) 406, 609
HindII GTYRAC 2 cut(s) 406, 609
HinfI GANTC 5 cut(s) 26, 51, 261, 856, 1396
HpaI GTTAAC 1 cut(s) 609
HpaII CCGG 2 cut(s) 44, 343
HphI GGTGA 4 cut(s) 575, 822, 965, 1037
Hpy166II GTNNAC 5 cut(s) 406, 609, 973, 1028, 1404
Hpy188III TCNNGA 1 cut(s) 775
Hpy8I GTNNAC 5 cut(s) 406, 609, 973, 1028, 1404
Hpy99I CGWCG 4 cut(s) 107, 122, 125, 791
HpyAV CCTTC 2 cut(s) 451, 661
HpyCH4III ACNGT 3 cut(s) 73, 1075, 1169
HpyCH4IV ACGT 2 cut(s) 61, 120
HpyCH4V TGCA 8 cut(s) 58, 334, 375, 429, 906, 1050, 1343, 1354
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 230, 239, 443, 832, 1200, 1312
HpyF3I CTNAG 3 cut(s) 892, 1095, 1467
HpySE526I ACGT 2 cut(s) 61, 120
Hsp92I GRCGYC 1 cut(s) 120
HspAI GCGC 3 cut(s) 490, 693, 1194
Ksp22I TGATCA 1 cut(s) 1222
KspAI GTTAAC 1 cut(s) 609
Kzo9I GATC 1 cut(s) 1222
LguI GCTCTTC 1 cut(s) 1302
LmnI GCTCC 3 cut(s) 163, 555, 915
Lsp1109I GCAGC 2 cut(s) 1208, 1433
LweI GCATC 4 cut(s) 89, 549, 1212, 1352
MaeI CTAG 3 cut(s) 132, 273, 755
MaeII ACGT 2 cut(s) 61, 120
MaeIII GTNAC 3 cut(s) 359, 828, 1159
MalI GATC 1 cut(s) 1224
MboI GATC 1 cut(s) 1222
MboII GAAGA 3 cut(s) 514, 538, 1289
MhlI GDGCHC 3 cut(s) 748, 920, 952
MlsI TGGCCA 1 cut(s) 1260
MluCI AATT 6 cut(s) 204, 567, 794, 1037, 1241, 1338
MluNI TGGCCA 1 cut(s) 1260
MlyI GAGTC 1 cut(s) 255
Mox20I TGGCCA 1 cut(s) 1260
MroXI GAANNNNTTC 1 cut(s) 671
MscI TGGCCA 1 cut(s) 1260
MseI TTAA 7 cut(s) 599, 608, 875, 927, 1001, 1032, 1392
Msp20I TGGCCA 1 cut(s) 1260
MspCI CTTAAG 1 cut(s) 1031
MspI CCGG 2 cut(s) 44, 343
MspR9I CCNGG 5 cut(s) 44, 344, 591, 1056, 1069
MvaI CCWGG 3 cut(s) 591, 1056, 1069
MwoI GCNNNNNNNGC 7 cut(s) 14, 230, 239, 443, 832, 1200, 1312
NciI CCSGG 2 cut(s) 44, 344
NcoI CCATGG 3 cut(s) 627, 706, 962
NdeI CATATG 1 cut(s) 650
NdeII GATC 1 cut(s) 1222
NlaIV GGNNCC 4 cut(s) 347, 463, 511, 745
NmeAIII GCCGAG 1 cut(s) 841
NmuCI GTSAC 1 cut(s) 828
NspI RCATGY 3 cut(s) 715, 910, 1138
PaeI GCATGC 2 cut(s) 715, 1138
PaeR7I CTCGAG 2 cut(s) 263, 293
PciSI GCTCTTC 1 cut(s) 1302
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PdmI GAANNNNTTC 1 cut(s) 671
PfeI GAWTC 4 cut(s) 26, 51, 856, 1396
PflFI GACNNNGTC 1 cut(s) 119
PflMI CCANNNNNTGG 2 cut(s) 400, 1111
PkrI GCNGC 5 cut(s) 10, 1198, 1314, 1423, 1457
PleI GAGTC 1 cut(s) 255
PpsI GAGTC 1 cut(s) 255
Psp124BI GAGCTC 1 cut(s) 920
Psp1406I AACGTT 1 cut(s) 61
Psp6I CCWGG 3 cut(s) 589, 1054, 1067
PspFI CCCAGC 1 cut(s) 536
PspGI CCWGG 3 cut(s) 589, 1054, 1067
PspN4I GGNNCC 4 cut(s) 347, 463, 511, 745
PspPI GGNCC 1 cut(s) 346
PspXI VCTCGAGB 2 cut(s) 263, 293
PsyI GACNNNGTC 1 cut(s) 119
RsaI GTAC 2 cut(s) 481, 886
RsaNI GTAC 2 cut(s) 480, 885
SacI GAGCTC 1 cut(s) 920
SapI GCTCTTC 1 cut(s) 1302
SaqAI TTAA 7 cut(s) 599, 608, 875, 927, 1001, 1032, 1392
SatI GCNGC 5 cut(s) 9, 1197, 1313, 1422, 1456
Sau3AI GATC 1 cut(s) 1222
Sau96I GGNCC 1 cut(s) 346
SchI GAGTC 1 cut(s) 255
ScrFI CCNGG 5 cut(s) 44, 344, 591, 1056, 1069
SduI GDGCHC 3 cut(s) 748, 920, 952
SfaNI GCATC 4 cut(s) 89, 549, 1212, 1352
SfcI CTRYAG 1 cut(s) 860
Sfr274I CTCGAG 2 cut(s) 263, 293
SlaI CTCGAG 2 cut(s) 263, 293
SmlI CTYRAG 3 cut(s) 263, 293, 1031
SmoI CTYRAG 3 cut(s) 263, 293, 1031
SpeI ACTAGT 1 cut(s) 272
SphI GCATGC 2 cut(s) 715, 1138
Sse9I AATT 6 cut(s) 204, 567, 794, 1037, 1241, 1338
SsiI CCGC 8 cut(s) 8, 23, 177, 733, 833, 943, 1312, 1361
SspMI CTAG 3 cut(s) 132, 273, 755
SstI GAGCTC 1 cut(s) 920
StyD4I CCNGG 5 cut(s) 42, 342, 589, 1054, 1067
StyI CCWWGG 6 cut(s) 349, 364, 627, 706, 754, 962
TaaI ACNGT 3 cut(s) 73, 1075, 1169
TaiI ACGT 2 cut(s) 64, 123
TaqI TCGA 7 cut(s) 75, 264, 294, 316, 774, 1010, 1386
TaqII GACCGA 1 cut(s) 1298
TasI AATT 6 cut(s) 204, 567, 794, 1037, 1241, 1338
TatI WGTACW 1 cut(s) 479
TauI GCSGC 2 cut(s) 11, 1315
TfiI GAWTC 4 cut(s) 26, 51, 856, 1396
Tru1I TTAA 7 cut(s) 599, 608, 875, 927, 1001, 1032, 1392
Tru9I TTAA 7 cut(s) 599, 608, 875, 927, 1001, 1032, 1392
TscAI CASTG 7 cut(s) 18, 24, 234, 249, 438, 649, 952
TseFI GTSAC 1 cut(s) 828
TseI GCWGC 3 cut(s) 1196, 1421, 1455
Tsp45I GTSAC 1 cut(s) 828
TspDTI ATGAA 2 cut(s) 43, 50
TspGWI ACGGA 1 cut(s) 267
TspRI CASTG 7 cut(s) 18, 24, 234, 249, 438, 649, 952
Tth111I GACNNNGTC 1 cut(s) 119
Van91I CCANNNNNTGG 2 cut(s) 400, 1111
Vha464I CTTAAG 1 cut(s) 1031
XagI CCTNNNNNAGG 2 cut(s) 758, 1019
XapI RAATTY 1 cut(s) 567
XceI RCATGY 3 cut(s) 715, 910, 1138
XcmI CCANNNNNNNNNTGG 1 cut(s) 1268
XhoI CTCGAG 2 cut(s) 263, 293
XmaJI CCTAGG 1 cut(s) 754
XmiI GTMKAC 1 cut(s) 1403
XmnI GAANNNNTTC 1 cut(s) 671
XspI CTAG 3 cut(s) 132, 273, 755
ZraI GACGTC 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.