Rh4AG021400

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000144
Physical Location & Seq
Reverse (-)
3989297 .. 3991654
2358 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG021400.1

Sequence Viewer

Length: 1524 bp
ATGTTTTCTTTAATTTCCTCATTGATTAGTTGCATTAGCCGCATGGAGGTGATTGGTGAAACTATAATCATTTGCGGTTGCCTAGTATTCGGTGGTGTGGTGCTTAAAAGACGACTCTGTCGCACACCCTGGGAGACACTACCTGACGATGTCATGGAGATTATTGTGCCTCACCTGAGCGTACGTGATCGTATACGCTTAAGCATTGTTTGCAAACCTTGGAGCTCAGTTCCTATGCGCTCGGACATCCCTAGCGCTCCACATCAACTCCCCTGGTTAATACTTCCTCAATCTTGCCATAACTACTTGAGCTTTTTTGACATCTATGAAGGTAAAGTTGGCAAGTTGGATCTGCCTGAACCAGTTCAAGGAGGGTGGTTTCATGGATCATCAAAAGGTTGGATGATCATGATCATGGAAAAGGATTTGGATTCTACCATGTTTCTTGTGAATCCAATTTCAGGAGCCCAGCACCAACTTCCACCTTTGAGCACAACTCCATCTTTCCAGAATTTTGTAGAAACAACCACATGGAAACGCTATGGTGCCTCTGCTTTCTGCTATAGTGTTGTGTTATCCACCTCAGATATTAATTCAGATCAATTTGTGGTTGCAGCAACCTTTGGAGATACTGATAGGCTGTGTTTGTGTAAACCGGGAGACAGAAGGTGGAGTATCTTGGAGGTGTTAGATGCAGACGAGTGGATTACAGATTTATTGTTTTCTTCTGGCAAGCTATACGCCTTGGTTATTAGTGATAATAAGAATGGCGTCATTTCAGCTCCTCGCACCTTAAAATGTGGAGATGATGCAGTGGAACTGAAGCTGGTCTATGACAAAAACCCAAGAGCCAATGACAGCTTTGAAGAATATGCTGACTATCTAGTCCAATTAAAAGGGACAGTAGACTCACATTTGGTAGAGTCAACAACCAATAATGAAATACTGCTGATCCATCAAGTACAAGATAAATTTGCAAAATGGTGTGACAACAACCATGAGGACGGTGATGCTGGTGGCAATGAGGAGGAAGGGGATGCTGAAGGCCGTGATGAGGATGAGGATGATGATGATGATGATGATGATGATGCCGATGCCGATGCCGATGAGGAAGACAACATGGAAGGTAATGAGGGTGGAGATGAAGAGGTGAATGATATGGGTTTTAACATCAATACTATTGATGAAGATGGTCATGACCTTAATCTATATTTGAGGACAAGTGAATTTAATGTATACAAGCTTCACGCAAAGAAGAACAAGATTGATAGTGTTACATGCTTTGAGGATCAACTATTGTTTTTGTCAAACTCAGGTTCGGTGTCCCTTCCTAAAAGAGATATCAATTTAACTGGGAATTGCATTTATTTTGCAACTAATAATATCTTGAAATTACATCCACGAACGTATACAAGTCGAGAGATTGGGGTGTTCAGCTTTGATGGGAGGAAAGTTAAGCGATCTTTCCCTAGCGTTGATGTGTCAGTACGATCTCGGCTCAGTTGGTTTACTCCAACTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

507

Amino Acids

57.0

Weight (kDa)

4.54

Isoelectric Point (pI)

38.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 105 - 479 8.6e-38 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 117, 884
AccB1I GGYRCC 1 cut(s) 545
AccI GTMKAC 4 cut(s) 193, 906, 1236, 1409
AciI CCGC 2 cut(s) 40, 75
AclWI GGATC 4 cut(s) 357, 394, 946, 1296
AcsI RAATTY 3 cut(s) 511, 971, 1226
AcuI CTGAAG 2 cut(s) 842, 1062
AcyI GRCGYC 1 cut(s) 771
AfaI GTAC 3 cut(s) 183, 963, 1488
AfeI AGCGCT 1 cut(s) 256
AfiI CCNNNNNNNGG 4 cut(s) 46, 368, 461, 1054
AflII CTTAAG 1 cut(s) 199
AgsI TTSAA 3 cut(s) 368, 866, 1390
AjnI CCWGG 2 cut(s) 128, 272
AjuI GAANNNNNNNTTGG 2 cut(s) 321, 353
AluBI AGCT 8 cut(s) 225, 312, 736, 782, 826, 861, 1243, 1437
AluI AGCT 8 cut(s) 225, 312, 736, 782, 826, 861, 1243, 1437
Alw21I GWGCWC 2 cut(s) 227, 494
Alw26I GTCTC 2 cut(s) 128, 654
AlwI GGATC 4 cut(s) 357, 394, 946, 1296
Aor51HI AGCGCT 1 cut(s) 256
AoxI GGCC 1 cut(s) 1045
ApeKI GCWGC 1 cut(s) 614
ApoI RAATTY 3 cut(s) 511, 971, 1226
AseI ATTAAT 1 cut(s) 591
Asp700I GAANNNNTTC 1 cut(s) 363
AspLEI GCGC 2 cut(s) 240, 257
AsuC2I CCSGG 1 cut(s) 657
AsuHPI GGTGA 5 cut(s) 61, 68, 164, 1019, 1162
BanI GGYRCC 1 cut(s) 545
BanII GRGCYC 2 cut(s) 227, 469
BarI GAAGNNNNNNTAC 2 cut(s) 1227, 1259
BbsI GAAGAC 1 cut(s) 1119
Bbv12I GWGCWC 2 cut(s) 227, 494
BbvI GCAGC 1 cut(s) 626
BccI CCATC 4 cut(s) 508, 963, 1184, 1436
BceAI ACGGC 1 cut(s) 1032
BcgI CGANNNNNNTGC 2 cut(s) 1082, 1116
BciT130I CCWGG 2 cut(s) 130, 274
BclI TGATCA 2 cut(s) 405, 411
BcnI CCSGG 1 cut(s) 657
BcoDI GTCTC 2 cut(s) 128, 654
BfaI CTAG 4 cut(s) 83, 252, 884, 1470
BfmI CTRYAG 1 cut(s) 562
BfoI RGCGCY 1 cut(s) 258
BfrI CTTAAG 1 cut(s) 199
BisI GCNGC 2 cut(s) 40, 615
BlsI GCNGC 2 cut(s) 41, 616
Bme1390I CCNGG 3 cut(s) 130, 274, 657
BmiI GGNNCC 2 cut(s) 466, 547
BmrFI CCNGG 3 cut(s) 130, 274, 657
BmrI ACTGGG 1 cut(s) 1362
BmsI GCATC 7 cut(s) 682, 799, 1000, 1027, 1078, 1084, 1090
BmuI ACTGGG 1 cut(s) 1362
BpiI GAAGAC 1 cut(s) 1119
BplI GAGNNNNNCTC 2 cut(s) 481, 513
Bpu10I CCTNAGC 1 cut(s) 176
BpuEI CTTGAG 1 cut(s) 328
BpuMI CCSGG 1 cut(s) 657
BsaAI YACGTR 1 cut(s) 185
BsaBI GATNNNNATC 1 cut(s) 410
BsaHI GRCGYC 1 cut(s) 771
BsaJI CCNNGG 5 cut(s) 128, 129, 218, 272, 744
BsaXI ACNNNNNCTCC 2 cut(s) 252, 282
Bsc4I CCNNNNNNNGG 4 cut(s) 46, 368, 461, 1054
Bse1I ACTGG 2 cut(s) 362, 1357
Bse3DI GCAATG 1 cut(s) 1027
Bse8I GATNNNNATC 1 cut(s) 410
BseBI CCWGG 2 cut(s) 130, 274
BseDI CCNNGG 5 cut(s) 128, 129, 218, 272, 744
BseGI GGATG 6 cut(s) 246, 408, 1042, 1063, 1069, 1396
BseJI GATNNNNATC 1 cut(s) 410
BseLI CCNNNNNNNGG 4 cut(s) 46, 368, 461, 1054
BseMI GCAATG 1 cut(s) 1027
BseMII CTCAG 5 cut(s) 167, 240, 597, 1326, 1513
BseNI ACTGG 2 cut(s) 362, 1357
BseRI GAGGAG 2 cut(s) 774, 1040
BseXI GCAGC 1 cut(s) 626
BseYI CCCAGC 1 cut(s) 468
BshFI GGCC 1 cut(s) 1047
BshNI GGYRCC 1 cut(s) 545
BsiHKAI GWGCWC 2 cut(s) 227, 494
BsiSI CCGG 1 cut(s) 656
BsiWI CGTACG 1 cut(s) 181
BslFI GGGAC 2 cut(s) 913, 1309
BslI CCNNNNNNNGG 4 cut(s) 46, 368, 461, 1054
BsmAI GTCTC 2 cut(s) 128, 654
BsmFI GGGAC 2 cut(s) 913, 1309
BsnI GGCC 1 cut(s) 1047
Bsp1286I GDGCHC 3 cut(s) 227, 469, 494
BspACI CCGC 2 cut(s) 40, 75
BspANI GGCC 1 cut(s) 1047
BspCNI CTCAG 5 cut(s) 168, 239, 596, 1325, 1512
BspHI TCATGA 2 cut(s) 408, 1195
BspLI GGNNCC 2 cut(s) 466, 547
BspPI GGATC 4 cut(s) 357, 394, 946, 1296
BspT107I GGYRCC 1 cut(s) 545
BspTI CTTAAG 1 cut(s) 199
BsrDI GCAATG 1 cut(s) 1027
BsrI ACTGG 2 cut(s) 362, 1357
BssECI CCNNGG 5 cut(s) 128, 129, 218, 272, 744
BssNAI GTATAC 3 cut(s) 194, 1237, 1410
BssNI GRCGYC 1 cut(s) 771
BssT1I CCWWGG 2 cut(s) 218, 744
Bst1107I GTATAC 3 cut(s) 194, 1237, 1410
Bst2UI CCWGG 2 cut(s) 130, 274
Bst4CI ACNGT 2 cut(s) 904, 1007
Bst6I CTCTTC 1 cut(s) 1140
BstACI GRCGYC 1 cut(s) 771
BstAFI CTTAAG 1 cut(s) 199
BstAPI GCANNNNNTGC 1 cut(s) 210
BstBAI YACGTR 1 cut(s) 185
BstC8I GCNNGC 1 cut(s) 734
BstDEI CTNAG 5 cut(s) 176, 226, 583, 1312, 1499
BstF5I GGATG 6 cut(s) 246, 408, 1042, 1063, 1069, 1396
BstH2I RGCGCY 1 cut(s) 258
BstHHI GCGC 2 cut(s) 240, 257
BstMAI GTCTC 2 cut(s) 128, 654
BstMWI GCNNNNNNNGC 2 cut(s) 39, 210
BstNI CCWGG 2 cut(s) 130, 274
BstNSI RCATGY 1 cut(s) 1281
BstSCI CCNGG 3 cut(s) 128, 272, 655
BstSFI CTRYAG 1 cut(s) 562
BstV1I GCAGC 1 cut(s) 626
BstV2I GAAGAC 1 cut(s) 1119
BstX2I RGATCY 1 cut(s) 349
BstYI RGATCY 1 cut(s) 349
BstZ17I GTATAC 3 cut(s) 194, 1237, 1410
BsuRI GGCC 1 cut(s) 1047
BtsCI GGATG 6 cut(s) 246, 408, 1042, 1063, 1069, 1396
BtsI GCAGTG 1 cut(s) 819
BtsIMutI CAGTG 1 cut(s) 819
Cac8I GCNNGC 1 cut(s) 734
CciI TCATGA 2 cut(s) 408, 1195
CfoI GCGC 2 cut(s) 240, 257
CseI GACGC 1 cut(s) 760
Csp6I GTAC 3 cut(s) 182, 962, 1487
CspCI CAANNNNNGTGG 2 cut(s) 356, 391
CviQI GTAC 3 cut(s) 182, 962, 1487
DdeI CTNAG 5 cut(s) 176, 226, 583, 1312, 1499
DrdI GACNNNNNNGTC 2 cut(s) 117, 884
DseDI GACNNNNNNGTC 2 cut(s) 117, 884
Eam1104I CTCTTC 1 cut(s) 1140
EarI CTCTTC 1 cut(s) 1140
Ecl136II GAGCTC 1 cut(s) 225
Eco130I CCWWGG 2 cut(s) 218, 744
Eco24I GRGCYC 2 cut(s) 227, 469
Eco32I GATATC 1 cut(s) 1342
Eco47III AGCGCT 1 cut(s) 256
Eco53kI GAGCTC 1 cut(s) 225
Eco57I CTGAAG 2 cut(s) 842, 1062
EcoICRI GAGCTC 1 cut(s) 225
EcoRII CCWGG 2 cut(s) 128, 272
EcoRV GATATC 1 cut(s) 1342
EcoT14I CCWWGG 2 cut(s) 218, 744
EcoT38I GRGCYC 2 cut(s) 227, 469
ErhI CCWWGG 2 cut(s) 218, 744
FaqI GGGAC 2 cut(s) 913, 1309
FbaI TGATCA 2 cut(s) 405, 411
FblI GTMKAC 4 cut(s) 193, 906, 1236, 1409
Fnu4HI GCNGC 2 cut(s) 40, 615
FokI GGATG 6 cut(s) 233, 415, 1049, 1070, 1076, 1383
FriOI GRGCYC 2 cut(s) 227, 469
Fsp4HI GCNGC 2 cut(s) 40, 615
FspBI CTAG 4 cut(s) 83, 252, 884, 1470
GlaI GCGC 2 cut(s) 239, 256
GluI GCNGC 2 cut(s) 40, 615
GsaI CCCAGC 1 cut(s) 472
HaeII RGCGCY 1 cut(s) 258
HaeIII GGCC 1 cut(s) 1047
HapII CCGG 1 cut(s) 656
HgaI GACGC 1 cut(s) 760
HhaI GCGC 2 cut(s) 240, 257
Hin1I GRCGYC 1 cut(s) 771
Hin6I GCGC 2 cut(s) 238, 255
HinP1I GCGC 2 cut(s) 238, 255
HincII GTYRAC 1 cut(s) 927
HindII GTYRAC 1 cut(s) 927
HindIII AAGCTT 1 cut(s) 1241
HinfI GANTC 5 cut(s) 114, 431, 451, 908, 923
HpaII CCGG 1 cut(s) 656
HphI GGTGA 5 cut(s) 61, 68, 164, 1019, 1162
Hpy166II GTNNAC 7 cut(s) 194, 653, 907, 927, 1237, 1410, 1509
Hpy188I TCNGA 3 cut(s) 244, 586, 598
Hpy188III TCNNGA 6 cut(s) 409, 462, 508, 1196, 1387, 1418
Hpy8I GTNNAC 7 cut(s) 194, 653, 907, 927, 1237, 1410, 1509
HpyAV CCTTC 6 cut(s) 323, 660, 1025, 1037, 1118, 1337
HpyCH4III ACNGT 2 cut(s) 904, 1007
HpyCH4IV ACGT 2 cut(s) 184, 1406
HpyCH4V TGCA 8 cut(s) 33, 213, 614, 695, 812, 977, 1362, 1373
HpyF10VI GCNNNNNNNGC 2 cut(s) 39, 210
HpyF3I CTNAG 5 cut(s) 176, 226, 583, 1312, 1499
HpySE526I ACGT 2 cut(s) 184, 1406
Hsp92I GRCGYC 1 cut(s) 771
HspAI GCGC 2 cut(s) 238, 255
Ksp22I TGATCA 2 cut(s) 405, 411
LmnI GCTCC 4 cut(s) 222, 262, 464, 787
Lsp1109I GCAGC 1 cut(s) 626
LweI GCATC 7 cut(s) 682, 799, 1000, 1027, 1078, 1084, 1090
MaeI CTAG 4 cut(s) 83, 252, 884, 1470
MaeII ACGT 2 cut(s) 184, 1406
MaeIII GTNAC 2 cut(s) 986, 1273
MboII GAAGA 6 cut(s) 717, 878, 1124, 1157, 1199, 1267
MflI RGATCY 1 cut(s) 349
MhlI GDGCHC 3 cut(s) 227, 469, 494
MlyI GAGTC 3 cut(s) 108, 902, 932
MmeI TCCRAC 2 cut(s) 327, 380
MroXI GAANNNNTTC 1 cut(s) 363
MslI CAYNNNNRTG 2 cut(s) 47, 413
MspCI CTTAAG 1 cut(s) 199
MspI CCGG 1 cut(s) 656
MspR9I CCNGG 3 cut(s) 130, 274, 657
MvaI CCWGG 2 cut(s) 130, 274
MwoI GCNNNNNNNGC 2 cut(s) 39, 210
NciI CCSGG 1 cut(s) 657
NlaIV GGNNCC 2 cut(s) 466, 547
NmeAIII GCCGAG 1 cut(s) 1474
NmuCI GTSAC 1 cut(s) 986
NspI RCATGY 1 cut(s) 1281
PagI TCATGA 2 cut(s) 408, 1195
PasI CCCWGGG 1 cut(s) 129
PdmI GAANNNNTTC 1 cut(s) 363
PfeI GAWTC 2 cut(s) 431, 451
Pfl23II CGTACG 1 cut(s) 181
PflFI GACNNNGTC 2 cut(s) 117, 149
PkrI GCNGC 2 cut(s) 41, 616
PleI GAGTC 3 cut(s) 108, 902, 931
PpsI GAGTC 3 cut(s) 108, 902, 931
Ppu21I YACGTR 1 cut(s) 185
PshBI ATTAAT 1 cut(s) 591
Psp124BI GAGCTC 1 cut(s) 227
Psp6I CCWGG 2 cut(s) 128, 272
PspFI CCCAGC 1 cut(s) 468
PspGI CCWGG 2 cut(s) 128, 272
PspLI CGTACG 1 cut(s) 181
PspN4I GGNNCC 2 cut(s) 466, 547
PsuI RGATCY 1 cut(s) 349
PsyI GACNNNGTC 2 cut(s) 117, 149
RsaI GTAC 3 cut(s) 183, 963, 1488
RsaNI GTAC 3 cut(s) 182, 962, 1487
RseI CAYNNNNRTG 2 cut(s) 47, 413
SacI GAGCTC 1 cut(s) 227
SatI GCNGC 2 cut(s) 40, 615
SchI GAGTC 3 cut(s) 108, 902, 932
ScrFI CCNGG 3 cut(s) 130, 274, 657
SduI GDGCHC 3 cut(s) 227, 469, 494
SfaNI GCATC 7 cut(s) 682, 799, 1000, 1027, 1078, 1084, 1090
SfcI CTRYAG 1 cut(s) 562
SmiMI CAYNNNNRTG 2 cut(s) 47, 413
SmlI CTYRAG 2 cut(s) 199, 307
SmoI CTYRAG 2 cut(s) 199, 307
SsiI CCGC 2 cut(s) 40, 75
SspMI CTAG 4 cut(s) 83, 252, 884, 1470
SstI GAGCTC 1 cut(s) 227
StyD4I CCNGG 3 cut(s) 128, 272, 655
StyI CCWWGG 2 cut(s) 218, 744
TaaI ACNGT 2 cut(s) 904, 1007
TaiI ACGT 2 cut(s) 187, 1409
TaqI TCGA 1 cut(s) 1417
TatI WGTACW 1 cut(s) 961
TauI GCSGC 1 cut(s) 42
TfiI GAWTC 2 cut(s) 431, 451
TscAI CASTG 1 cut(s) 819
TseFI GTSAC 1 cut(s) 986
TseI GCWGC 1 cut(s) 614
Tsp45I GTSAC 1 cut(s) 986
TspDTI ATGAA 5 cut(s) 342, 371, 954, 1158, 1200
TspRI CASTG 1 cut(s) 819
Tth111I GACNNNGTC 2 cut(s) 117, 149
Vha464I CTTAAG 1 cut(s) 199
VspI ATTAAT 1 cut(s) 591
XapI RAATTY 3 cut(s) 511, 971, 1226
XceI RCATGY 1 cut(s) 1281
XmiI GTMKAC 4 cut(s) 193, 906, 1236, 1409
XmnI GAANNNNTTC 1 cut(s) 363
XspI CTAG 4 cut(s) 83, 252, 884, 1470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.