RLG00000001371

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000144
Physical Location & Seq
Forward (+)
14794155 .. 14795831
1677 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001371

Sequence Viewer

Length: 1677 bp
ATGATTGACGCTCTATTTGGTTGCTTCAGTGGAAAGCAAGGCAAACAAAAGAGAAGCAAGCTTGATCTTAGGAGAAAACTCTGCCGGAAAAAGCTTGAGACAAAGCAAACGGAAGATGAAGGCATGTCTTGGCAGAAACCATCTGCAGATGTCATGGAGAACATTCTTCAGCGTGTCAATGTAGGTGACCGCATACGGTTTAGCATCGTCTCCAAGCCTTGGAACTCAATTGTTACACGAAGAGACATCCGTGGTACTCCACATGAACTCCCCTGGTTACTACTCCCTCATCCCAGAAAATGGAAGTACTTGAGCTTTCTTAGTCTTTCTGAGGGAAAAGTTGTGAAGTTGAAGCCGCCTAAGACGGTTCGAGGAGGGTGGGTTTATGGGTCTACTAAAGGTTGCTTGATCATAATAAAGGAACAAGGACTGAAATCTACTATGTTTCTGGTAAACCCAATTTCAAGAGCCCTAGACCAACTTCCGCCATTTAAAACTATTCCATCTTTTCGGAAGTATATAAAAACGCGGGAATGGAAACGTTTCGGTGCCAATCTGTTCTGCCCTCGCATTGCGGTATCTATCTCGGATAATATTAATTCGAACTGTTGGACGATGGCAGCAGCAGTTTTAAGCGATTTCAAGACACTCGGATTGTGCAGACCTGGAGACAAAACATGGAGTGTCTTCCAGGTATTAGATAGTAGTCAAGCCGATTGCTTTGATGATATATTGTTTTCTTGTGGGACTCTATATGCTTTGGTTCATAGTAGACAAAGGAGGGATGAAGTCGCTGCTATACGCACTTTAAAATTTGGAGACAATGGCTTGGAAATTATGTTGAAGTTGGTCTACGACAAGGATGAAAACTGCAGGAATCCGAGTATTCTTGAAAATCATAGGGAACATATGATCGTCTACGCTCCATCCTACTGCTCAATGTTATCAGAATCCACCAATAATGAAGTCTTGGTAATTCATCAAATGAAAGACTCCTTTTGGTGGAGAGAAAATCATGGTAATGGAGGCAATAATGAGAATGATAACGCCGGCGGTTATGTCCCTAATAATCAAGACTTCAATAATCGTGATGAAGGCAATAATGCCAATGATGGTGGCGGCCTCAATATTGTTGAGGAGTATGATGAAGACATCTATGACGAGTACAATGGTGAAGACATCTATGAGGATGAAGACATCTATGATGAAGACATCCATGACGAGTACAATGGTGATGAGGAAGACATTCATGAGGATCATGATGAAAATGATCATGTTGAAGACAACCAGCAGCATGGAAGAGAAGTTAGGGATGAAGAGGCGCCTCCATTTATTCCATTATTGATCAGGACAAGGAGTTTTAAAGCATACAAGATTGACCCATATAACAACAACTTTATTGAGTTGCAATGCCTGGGGGACCAATTGTTATTTTTAGGAGAAGGTGGATCTTTCTCTCTTCCCGCTAATGATTTCGAAGAAGTAGGAAAGAACTGCATTTATTTTGCAACAAATTATATTGACCAGTTCGAATCAGCTCCTAAAATATCTAAATCTCGAGAGATTGGCATATTCTATTTGGATCGTGGAAGAAATAGGGGAAGAATTGAGCGGTCTTTTCCAAGTATCGACATGTCTGTGACGTATCAACCTACTTGGTTCACTCCATGTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

559

Amino Acids

64.39

Weight (kDa)

5.33

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 50 - 82 2.4e-06 F-box domain
Beta-prop_KIB1-4 PF03478 106 - 259 3.1e-15 KIB1-4 beta-propeller
Beta-prop_KIB1-4 PF03478 450 - 525 5.5e-12 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 548, 1321
AccB7I CCANNNNNTGG 2 cut(s) 219, 300
AccBSI CCGCTC 1 cut(s) 1612
AccI GTMKAC 4 cut(s) 392, 772, 852, 918
AccII CGCG 1 cut(s) 529
AciI CCGC 9 cut(s) 190, 356, 485, 529, 575, 1053, 1119, 1464, 1612
AclI AACGTT 1 cut(s) 541
AclWI GGATC 3 cut(s) 1263, 1456, 1590
AcsI RAATTY 1 cut(s) 812
AcuI CTGAAG 2 cut(s) 10, 152
AcyI GRCGYC 1 cut(s) 1322
AfaI GTAC 4 cut(s) 256, 308, 1166, 1226
AfiI CCNNNNNNNGG 3 cut(s) 219, 300, 1002
AflIII ACRYGT 1 cut(s) 1632
AgsI TTSAA 7 cut(s) 352, 465, 643, 844, 893, 1081, 1280
AjnI CCWGG 4 cut(s) 272, 664, 690, 1413
AluBI AGCT 4 cut(s) 61, 94, 315, 1538
AluI AGCT 4 cut(s) 61, 94, 315, 1538
Alw26I GTCTC 5 cut(s) 92, 214, 237, 663, 813
AlwI GGATC 3 cut(s) 1263, 1456, 1590
Ama87I CYCGRG 1 cut(s) 1557
AoxI GGCC 1 cut(s) 1120
ApeKI GCWGC 4 cut(s) 620, 623, 794, 1291
ApoI RAATTY 1 cut(s) 812
ArsI GACNNNNNNTTYG 1 cut(s) 31
AseI ATTAAT 1 cut(s) 597
Asp700I GAANNNNTTC 2 cut(s) 542, 1245
AspLEI GCGC 1 cut(s) 1324
AspS9I GGNCC 1 cut(s) 1420
AsuHPI GGTGA 3 cut(s) 197, 1184, 1244
AsuII TTCGAA 3 cut(s) 602, 1476, 1530
AvaI CYCGRG 1 cut(s) 1557
AvaII GGWCC 1 cut(s) 1420
BanI GGYRCC 2 cut(s) 548, 1321
BanII GRGCYC 1 cut(s) 472
BarI GAAGNNNNNNTAC 2 cut(s) 836, 868
BbsI GAAGAC 7 cut(s) 679, 1155, 1182, 1200, 1215, 1248, 1287
BbvI GCAGC 4 cut(s) 632, 635, 781, 1303
BccI CCATC 5 cut(s) 148, 511, 610, 934, 1106
BciT130I CCWGG 4 cut(s) 274, 666, 692, 1415
BclI TGATCA 3 cut(s) 408, 1270, 1344
BcoDI GTCTC 5 cut(s) 92, 214, 237, 663, 813
BfaI CTAG 2 cut(s) 473, 1675
BfmI CTRYAG 2 cut(s) 144, 871
BfoI RGCGCY 1 cut(s) 1325
BisI GCNGC 6 cut(s) 356, 621, 624, 795, 1120, 1292
BlsI GCNGC 6 cut(s) 357, 622, 625, 796, 1121, 1293
BmcAI AGTACT 1 cut(s) 308
Bme1390I CCNGG 4 cut(s) 274, 666, 692, 1415
Bme18I GGWCC 1 cut(s) 1420
BmeT110I CYCGRG 1 cut(s) 1557
BmgT120I GGNCC 1 cut(s) 1420
BmiI GGNNCC 3 cut(s) 550, 1323, 1421
BmrFI CCNGG 4 cut(s) 274, 666, 692, 1415
BmsI GCATC 1 cut(s) 213
BpiI GAAGAC 7 cut(s) 679, 1155, 1182, 1200, 1215, 1248, 1287
BpmI CTGGAG 1 cut(s) 687
Bpu14I TTCGAA 3 cut(s) 602, 1476, 1530
BpuEI CTTGAG 2 cut(s) 116, 331
BsaHI GRCGYC 1 cut(s) 1322
BsaJI CCNNGG 4 cut(s) 218, 250, 272, 1414
BsaXI ACNNNNNCTCC 4 cut(s) 252, 282, 366, 396
Bsc4I CCNNNNNNNGG 3 cut(s) 219, 300, 1002
Bse118I RCCGGY 1 cut(s) 1049
Bse1I ACTGG 1 cut(s) 1525
Bse3DI GCAATG 2 cut(s) 570, 1415
BseBI CCWGG 4 cut(s) 274, 666, 692, 1415
BseDI CCNNGG 4 cut(s) 218, 250, 272, 1414
BseGI GGATG 8 cut(s) 246, 289, 790, 868, 926, 1195, 1212, 1318
BseLI CCNNNNNNNGG 3 cut(s) 219, 300, 1002
BseMI GCAATG 2 cut(s) 570, 1415
BseMII CTCAG 1 cut(s) 321
BseNI ACTGG 1 cut(s) 1525
BseRI GAGGAG 2 cut(s) 387, 1151
BseXI GCAGC 4 cut(s) 632, 635, 781, 1303
BsgI GTGCAG 1 cut(s) 679
Bsh1236I CGCG 1 cut(s) 529
BshFI GGCC 1 cut(s) 1122
BshNI GGYRCC 2 cut(s) 548, 1321
BsiHKCI CYCGRG 1 cut(s) 1557
BsiSI CCGG 2 cut(s) 85, 1050
BslFI GGGAC 3 cut(s) 760, 1046, 1433
BslI CCNNNNNNNGG 3 cut(s) 219, 300, 1002
BsmAI GTCTC 5 cut(s) 92, 214, 237, 663, 813
BsmBI CGTCTC 1 cut(s) 214
BsmFI GGGAC 3 cut(s) 760, 1046, 1433
BsnI GGCC 1 cut(s) 1122
BsoBI CYCGRG 1 cut(s) 1557
Bsp119I TTCGAA 3 cut(s) 602, 1476, 1530
Bsp1286I GDGCHC 1 cut(s) 472
Bsp143I GATC 8 cut(s) 64, 408, 912, 1255, 1270, 1344, 1448, 1582
BspACI CCGC 9 cut(s) 190, 356, 485, 529, 575, 1053, 1119, 1464, 1612
BspANI GGCC 1 cut(s) 1122
BspCNI CTCAG 1 cut(s) 322
BspFNI CGCG 1 cut(s) 529
BspHI TCATGA 2 cut(s) 1249, 1258
BspLI GGNNCC 3 cut(s) 550, 1323, 1421
BspMAI CTGCAG 2 cut(s) 148, 875
BspPI GGATC 3 cut(s) 1263, 1456, 1590
BspT104I TTCGAA 3 cut(s) 602, 1476, 1530
BspT107I GGYRCC 2 cut(s) 548, 1321
BsrBI CCGCTC 1 cut(s) 1612
BsrDI GCAATG 2 cut(s) 570, 1415
BsrFI RCCGGY 1 cut(s) 1049
BsrI ACTGG 1 cut(s) 1525
BssAI RCCGGY 1 cut(s) 1049
BssECI CCNNGG 4 cut(s) 218, 250, 272, 1414
BssMI GATC 8 cut(s) 64, 408, 912, 1255, 1270, 1344, 1448, 1582
BssNI GRCGYC 1 cut(s) 1322
BssT1I CCWWGG 1 cut(s) 218
Bst2UI CCWGG 4 cut(s) 274, 666, 692, 1415
Bst4CI ACNGT 3 cut(s) 198, 367, 608
Bst6I CTCTTC 4 cut(s) 235, 1294, 1311, 1464
BstACI GRCGYC 1 cut(s) 1322
BstBI TTCGAA 3 cut(s) 602, 1476, 1530
BstC8I GCNNGC 2 cut(s) 59, 1051
BstDEI CTNAG 4 cut(s) 68, 320, 330, 360
BstDSI CCRYGG 1 cut(s) 250
BstEII GGTNACC 1 cut(s) 185
BstF5I GGATG 8 cut(s) 246, 289, 790, 868, 926, 1195, 1212, 1318
BstFNI CGCG 1 cut(s) 529
BstH2I RGCGCY 1 cut(s) 1325
BstHHI GCGC 1 cut(s) 1324
BstKTI GATC 8 cut(s) 67, 411, 915, 1258, 1273, 1347, 1451, 1585
BstMAI GTCTC 5 cut(s) 92, 214, 237, 663, 813
BstMBI GATC 8 cut(s) 64, 408, 912, 1255, 1270, 1344, 1448, 1582
BstNI CCWGG 4 cut(s) 274, 666, 692, 1415
BstNSI RCATGY 2 cut(s) 127, 1636
BstPI GGTNACC 1 cut(s) 185
BstSCI CCNGG 4 cut(s) 272, 664, 690, 1413
BstSFI CTRYAG 2 cut(s) 144, 871
BstUI CGCG 1 cut(s) 529
BstV1I GCAGC 4 cut(s) 632, 635, 781, 1303
BstV2I GAAGAC 7 cut(s) 679, 1155, 1182, 1200, 1215, 1248, 1287
BstX2I RGATCY 1 cut(s) 1448
BstXI CCANNNNNNTGG 1 cut(s) 1295
BstYI RGATCY 1 cut(s) 1448
BsuRI GGCC 1 cut(s) 1122
BtgI CCRYGG 1 cut(s) 250
BtsCI GGATG 8 cut(s) 246, 289, 790, 868, 926, 1195, 1212, 1318
BtsIMutI CAGTG 1 cut(s) 34
Cac8I GCNNGC 2 cut(s) 59, 1051
CciI TCATGA 2 cut(s) 1249, 1258
CfoI GCGC 1 cut(s) 1324
Cfr10I RCCGGY 1 cut(s) 1049
Cfr13I GGNCC 1 cut(s) 1420
CseI GACGC 1 cut(s) 17
Csp6I GTAC 4 cut(s) 255, 307, 1165, 1225
CspCI CAANNNNNGTGG 2 cut(s) 1096, 1131
CviQI GTAC 4 cut(s) 255, 307, 1165, 1225
DdeI CTNAG 4 cut(s) 68, 320, 330, 360
DinI GGCGCC 1 cut(s) 1323
DpnI GATC 8 cut(s) 66, 410, 914, 1257, 1272, 1346, 1450, 1584
DpnII GATC 8 cut(s) 64, 408, 912, 1255, 1270, 1344, 1448, 1582
DraI TTTAAA 3 cut(s) 493, 810, 1363
Eam1104I CTCTTC 4 cut(s) 235, 1294, 1311, 1464
EarI CTCTTC 4 cut(s) 235, 1294, 1311, 1464
EciI GGCGGA 1 cut(s) 474
Eco130I CCWWGG 1 cut(s) 218
Eco24I GRGCYC 1 cut(s) 472
Eco47I GGWCC 1 cut(s) 1420
Eco57I CTGAAG 2 cut(s) 10, 152
Eco88I CYCGRG 1 cut(s) 1557
Eco91I GGTNACC 1 cut(s) 185
EcoO65I GGTNACC 1 cut(s) 185
EcoRII CCWGG 4 cut(s) 272, 664, 690, 1413
EcoT14I CCWWGG 1 cut(s) 218
EcoT38I GRGCYC 1 cut(s) 472
EgeI GGCGCC 1 cut(s) 1323
EheI GGCGCC 1 cut(s) 1323
ErhI CCWWGG 1 cut(s) 218
Esp3I CGTCTC 1 cut(s) 214
FaqI GGGAC 3 cut(s) 760, 1046, 1433
FauI CCCGC 2 cut(s) 522, 1471
FauNDI CATATG 1 cut(s) 909
FbaI TGATCA 3 cut(s) 408, 1270, 1344
FblI GTMKAC 4 cut(s) 392, 772, 852, 918
Fnu4HI GCNGC 6 cut(s) 356, 621, 624, 795, 1120, 1292
FokI GGATG 8 cut(s) 233, 276, 797, 875, 913, 1199, 1202, 1325
FriOI GRGCYC 1 cut(s) 472
Fsp4HI GCNGC 6 cut(s) 356, 621, 624, 795, 1120, 1292
FspBI CTAG 2 cut(s) 473, 1675
GlaI GCGC 1 cut(s) 1323
GluI GCNGC 6 cut(s) 356, 621, 624, 795, 1120, 1292
GsuI CTGGAG 1 cut(s) 687
HaeII RGCGCY 1 cut(s) 1325
HaeIII GGCC 1 cut(s) 1122
HapII CCGG 2 cut(s) 85, 1050
HgaI GACGC 1 cut(s) 17
HhaI GCGC 1 cut(s) 1324
Hin1I GRCGYC 1 cut(s) 1322
Hin6I GCGC 1 cut(s) 1322
HinP1I GCGC 1 cut(s) 1322
HindIII AAGCTT 2 cut(s) 59, 92
HinfI GANTC 5 cut(s) 748, 877, 950, 992, 1532
HpaII CCGG 2 cut(s) 85, 1050
HphI GGTGA 3 cut(s) 197, 1184, 1244
Hpy166II GTNNAC 6 cut(s) 393, 454, 773, 853, 919, 1662
Hpy188I TCNGA 6 cut(s) 331, 513, 589, 653, 882, 949
Hpy8I GTNNAC 6 cut(s) 393, 454, 773, 853, 919, 1662
HpyAV CCTTC 3 cut(s) 113, 1088, 1436
HpyCH4III ACNGT 3 cut(s) 198, 367, 608
HpyCH4IV ACGT 2 cut(s) 541, 1643
HpyCH4V TGCA 6 cut(s) 146, 660, 873, 1408, 1497, 1508
HpyF3I CTNAG 4 cut(s) 68, 320, 330, 360
HpySE526I ACGT 2 cut(s) 541, 1643
Hsp92I GRCGYC 1 cut(s) 1322
HspAI GCGC 1 cut(s) 1322
KasI GGCGCC 1 cut(s) 1321
KroI GCCGGC 1 cut(s) 1049
KroNI GCCGGC 1 cut(s) 1051
Ksp22I TGATCA 3 cut(s) 408, 1270, 1344
Kzo9I GATC 8 cut(s) 64, 408, 912, 1255, 1270, 1344, 1448, 1582
LmnI GCTCC 2 cut(s) 928, 1543
Lsp1109I GCAGC 4 cut(s) 632, 635, 781, 1303
LweI GCATC 1 cut(s) 213
MaeI CTAG 2 cut(s) 473, 1675
MaeII ACGT 2 cut(s) 541, 1643
MaeIII GTNAC 4 cut(s) 185, 232, 276, 1639
MalI GATC 8 cut(s) 66, 410, 914, 1257, 1272, 1346, 1450, 1584
MbiI CCGCTC 1 cut(s) 1612
MboI GATC 8 cut(s) 64, 408, 912, 1255, 1270, 1344, 1448, 1582
MfeI CAATTG 2 cut(s) 228, 1424
MflI RGATCY 1 cut(s) 1448
MhlI GDGCHC 1 cut(s) 472
MluCI AATT 9 cut(s) 228, 459, 598, 812, 834, 975, 1424, 1513, 1605
Mly113I GGCGCC 1 cut(s) 1322
MlyI GAGTC 2 cut(s) 742, 986
MmeI TCCRAC 1 cut(s) 590
MreI CGCCGGCG 1 cut(s) 1049
MroNI GCCGGC 1 cut(s) 1049
MroXI GAANNNNTTC 2 cut(s) 542, 1245
MseI TTAA 5 cut(s) 492, 597, 632, 809, 1362
MslI CAYNNNNRTG 2 cut(s) 1020, 1637
MspI CCGG 2 cut(s) 85, 1050
MspR9I CCNGG 4 cut(s) 274, 666, 692, 1415
MunI CAATTG 2 cut(s) 228, 1424
MvaI CCWGG 4 cut(s) 274, 666, 692, 1415
MvnI CGCG 1 cut(s) 529
NaeI GCCGGC 1 cut(s) 1051
NarI GGCGCC 1 cut(s) 1322
NdeI CATATG 1 cut(s) 909
NdeII GATC 8 cut(s) 64, 408, 912, 1255, 1270, 1344, 1448, 1582
NgoMIV GCCGGC 1 cut(s) 1049
NlaIV GGNNCC 3 cut(s) 550, 1323, 1421
NmuCI GTSAC 2 cut(s) 185, 1639
NspI RCATGY 2 cut(s) 127, 1636
NspV TTCGAA 3 cut(s) 602, 1476, 1530
PaeR7I CTCGAG 1 cut(s) 1557
PagI TCATGA 2 cut(s) 1249, 1258
PciI ACATGT 1 cut(s) 1632
PdiI GCCGGC 1 cut(s) 1051
PdmI GAANNNNTTC 2 cut(s) 542, 1245
PfeI GAWTC 3 cut(s) 877, 950, 1532
PflMI CCANNNNNTGG 2 cut(s) 219, 300
PkrI GCNGC 6 cut(s) 357, 622, 625, 796, 1121, 1293
PleI GAGTC 2 cut(s) 742, 986
PluTI GGCGCC 1 cut(s) 1325
PpsI GAGTC 2 cut(s) 742, 986
PscI ACATGT 1 cut(s) 1632
PshBI ATTAAT 1 cut(s) 597
Psp1406I AACGTT 1 cut(s) 541
Psp6I CCWGG 4 cut(s) 272, 664, 690, 1413
PspEI GGTNACC 1 cut(s) 185
PspGI CCWGG 4 cut(s) 272, 664, 690, 1413
PspN4I GGNNCC 3 cut(s) 550, 1323, 1421
PspPI GGNCC 1 cut(s) 1420
PstI CTGCAG 2 cut(s) 148, 875
PsuI RGATCY 1 cut(s) 1448
RsaI GTAC 4 cut(s) 256, 308, 1166, 1226
RsaNI GTAC 4 cut(s) 255, 307, 1165, 1225
RseI CAYNNNNRTG 2 cut(s) 1020, 1637
SaqAI TTAA 5 cut(s) 492, 597, 632, 809, 1362
SatI GCNGC 6 cut(s) 356, 621, 624, 795, 1120, 1292
Sau3AI GATC 8 cut(s) 64, 408, 912, 1255, 1270, 1344, 1448, 1582
Sau96I GGNCC 1 cut(s) 1420
ScaI AGTACT 1 cut(s) 308
SchI GAGTC 2 cut(s) 742, 986
ScrFI CCNGG 4 cut(s) 274, 666, 692, 1415
SduI GDGCHC 1 cut(s) 472
SfaNI GCATC 1 cut(s) 213
SfcI CTRYAG 2 cut(s) 144, 871
SfoI GGCGCC 1 cut(s) 1323
Sfr274I CTCGAG 1 cut(s) 1557
SfuI TTCGAA 3 cut(s) 602, 1476, 1530
SgrAI CRCCGGYG 1 cut(s) 1049
SinI GGWCC 1 cut(s) 1420
SlaI CTCGAG 1 cut(s) 1557
SmiMI CAYNNNNRTG 2 cut(s) 1020, 1637
SmlI CTYRAG 3 cut(s) 95, 310, 1557
SmoI CTYRAG 3 cut(s) 95, 310, 1557
Sse9I AATT 9 cut(s) 228, 459, 598, 812, 834, 975, 1424, 1513, 1605
SsiI CCGC 9 cut(s) 190, 356, 485, 529, 575, 1053, 1119, 1464, 1612
SspDI GGCGCC 1 cut(s) 1321
SspI AATATT 2 cut(s) 595, 1129
SspMI CTAG 2 cut(s) 473, 1675
StyD4I CCNGG 4 cut(s) 272, 664, 690, 1413
StyI CCWWGG 1 cut(s) 218
TaaI ACNGT 3 cut(s) 198, 367, 608
TaiI ACGT 2 cut(s) 544, 1646
TaqI TCGA 6 cut(s) 370, 602, 1476, 1530, 1558, 1629
TasI AATT 9 cut(s) 228, 459, 598, 812, 834, 975, 1424, 1513, 1605
TatI WGTACW 3 cut(s) 306, 1164, 1224
TauI GCSGC 2 cut(s) 358, 1122
TfiI GAWTC 3 cut(s) 877, 950, 1532
Tru1I TTAA 5 cut(s) 492, 597, 632, 809, 1362
Tru9I TTAA 5 cut(s) 492, 597, 632, 809, 1362
TscAI CASTG 1 cut(s) 34
TseFI GTSAC 2 cut(s) 185, 1639
TseI GCWGC 4 cut(s) 620, 623, 794, 1291
Tsp45I GTSAC 2 cut(s) 185, 1639
TspGWI ACGGA 2 cut(s) 125, 239
TspRI CASTG 1 cut(s) 34
Van91I CCANNNNNTGG 2 cut(s) 219, 300
VpaK11BI GGWCC 1 cut(s) 1420
VspI ATTAAT 1 cut(s) 597
XapI RAATTY 1 cut(s) 812
XceI RCATGY 2 cut(s) 127, 1636
XhoI CTCGAG 1 cut(s) 1557
XmiI GTMKAC 4 cut(s) 392, 772, 852, 918
XmnI GAANNNNTTC 2 cut(s) 542, 1245
XspI CTAG 2 cut(s) 473, 1675
ZrmI AGTACT 1 cut(s) 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.