Rh6AG070500

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000144
Physical Location & Seq
Forward (+)
10092904 .. 10094673
1770 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG070500.1

Sequence Viewer

Length: 1770 bp
ATGATCGAGTCTCTATTCGCTTGCTTCAATCCTCGATGCAATACGAGCAAGCTTAGGCTGCTAAAGAGAAAAAAACTCCCAAAGAAATTAGAGAGGGAGCAGAAGGAGAATGAAGATGATAAGTACAGAAACCAAACCAGTTCTAATGAATGTACCTCTTGGCAGCCACCGCCTCCTGATATCATGGAGCAAGTTCTGCCGCGTGTCAGAGTAAGTGATCAAATAAGGCTAAGCATTGCCTGCAAGTCTTGGATGTCAATCGTTATGCGTAGAGACATCCGCAGTGCTTCTCATGAATTCCCATGGTTACTACTCCCTCAAACCCCACATTGCAGCAACAAGTACGTAAGCTTTGCCAGCGTGTCAGAGGGGAGAGTTGTCAAGTTGAAGCTACCTAAGCAAGTTCGTGGATGGTGGATTTATGGGTCTTCTAAAGGTTGGTTGATCATGATCAAGGAAAGAGGTCTAAATTCCAAGATGTGTCTACTTAACCCAATTTCAGGAGCCCTACTCCAACTTCCACCCTTGAGAACACTTCCTTTTCTGAAAGATTTTGTGAAAACCGAGGACTGGAAACTTTTTGGTGCCAATGCATTCGACTTAAGGATTGCACTATCAACCTCTGATGGAATTGCTTTAGATTCAAAGCGTTGTACGGTAGCAGCAGTTTTTAATGATAAGTCGAAATTGAGTTTGTGCAGACCTGGAGACAGAACATGGAGTGACTTTCAAGTATTAGATACTAATCAAAACGACTGGATTGCTGATTTATTGTTTTCTTCCGGCAGTCTATATGTTTTGGTTCGTGGTGGTCAAAAGGAAAGCTTTGTAGACTCAGTTACTCAAACCTTGAACTTTAGCTTTGGAGATGCAGAAAATTTGAAAATGAAGTTGGTCTACGACAAGCATGAAAACAGGAACGTGAACGTTAATGAATGTCATAGTGACTATAAGATCGTTTACAATGCATTATACTTCTCAAGATTGTTAGAATCAACCAGCAATGAAGTCTTATTGATCCATCAAATGGTAGATTATGTTGTGGGAAGAAGAGAGGATATTATTGGTGACAATAATGAGAATAATGGAGGCGGCAATATGGAGAATGATGATGGTGAGCAACACATTCATCATGATAATGACGACGGAAATCTTGAGGTTGATGGGGTAGACATCGATCAGAATGATGAGGATGATGATGAAGCCAACAACTTAGAAGATATTGATCAGCAAAATGGAGGAAACATTATTTATGGTGATGAAGGCAGCATTAGTGGCGACAGCAATATGGAAAATGATGATGGTGGTGAAGTCCATAACGACAATAATGATGTTGATGTGGGAGACATTAATCAGAATCCTGAAGGTGATGAGGAAGACAACAATAACCCAGAAGATAATGGTCAGCAAGGAGAAACTATTGATGAAGATGCACCGGGATTTAATGCATATATGACAACAAGGAGTTTTAGAGTATACAAGACTGACGACGACAACTTTATTCCATTGCATTGCTTGGGGGATCAATTATTCTTTCTTGGAGATTGTGGTTCCTTCTCCTTTGGAGTCAGTAATATGAAAAAATCAGAAAGGAATTGTATTTATTTTGCATCAAATTTGATGTACGATTGGGAGGCAGCTCCAAAAACGTATGCATCTCGTGACATTGGTATATTCTACCTAGATAGCCAAAGAATTGAGCGGTCATTTCCAAGTGTTGAGATGTCTCTACGGTATCAAGGGACTTGGTTCACTCCAAGTTTATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

589

Amino Acids

67.09

Weight (kDa)

4.7

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 118 - 342 1.3e-20 KIB1-4 beta-propeller
Beta-prop_KIB1-4 PF03478 484 - 559 5.6e-09 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 584
AccB7I CCANNNNNTGG 1 cut(s) 1027
AccBSI CCGCTC 1 cut(s) 1702
AccI GTMKAC 5 cut(s) 484, 831, 897, 1170, 1476
AccII CGCG 1 cut(s) 202
AciI CCGC 5 cut(s) 170, 200, 280, 1092, 1702
AclI AACGTT 1 cut(s) 927
AclWI GGATC 2 cut(s) 1012, 1530
AcsI RAATTY 4 cut(s) 296, 469, 877, 1615
AcuI CTGAAG 1 cut(s) 1383
AfaI GTAC 5 cut(s) 125, 154, 344, 655, 1625
AfiI CCNNNNNNNGG 3 cut(s) 500, 570, 1027
AflII CTTAAG 1 cut(s) 601
AgsI TTSAA 6 cut(s) 28, 388, 645, 731, 853, 883
AjnI CCWGG 1 cut(s) 703
AjuI GAANNNNNNNTTGG 2 cut(s) 875, 907
AluBI AGCT 6 cut(s) 52, 351, 391, 825, 861, 1640
AluI AGCT 6 cut(s) 52, 351, 391, 825, 861, 1640
Alw26I GTCTC 5 cut(s) 15, 267, 702, 1338, 1731
AlwI GGATC 2 cut(s) 1012, 1530
ApeKI GCWGC 6 cut(s) 58, 163, 333, 662, 1266, 1637
ApoI RAATTY 4 cut(s) 296, 469, 877, 1615
AseI ATTAAT 1 cut(s) 1350
AsuC2I CCSGG 1 cut(s) 1437
AsuHPI GGTGA 5 cut(s) 1079, 1127, 1268, 1319, 1379
BanI GGYRCC 1 cut(s) 584
BanII GRGCYC 1 cut(s) 508
BarI GAAGNNNNNNTAC 2 cut(s) 881, 913
BauI CACGAG 1 cut(s) 1659
BbsI GAAGAC 2 cut(s) 420, 1383
BbvI GCAGC 6 cut(s) 45, 175, 345, 674, 1278, 1649
BccI CCATC 6 cut(s) 405, 620, 1029, 1106, 1157, 1295
BcgI CGANNNNNNTGC 2 cut(s) 743, 777
BciT130I CCWGG 1 cut(s) 705
BclI TGATCA 4 cut(s) 217, 444, 450, 1225
BcnI CCSGG 1 cut(s) 1437
BcoDI GTCTC 5 cut(s) 15, 267, 702, 1338, 1731
BfaI CTAG 1 cut(s) 1682
BfrI CTTAAG 1 cut(s) 601
BisI GCNGC 8 cut(s) 59, 164, 200, 334, 663, 1093, 1267, 1638
BlpI GCTNAGC 1 cut(s) 230
BlsI GCNGC 8 cut(s) 60, 165, 201, 335, 664, 1094, 1268, 1639
Bme1390I CCNGG 2 cut(s) 705, 1437
BmiI GGNNCC 3 cut(s) 505, 586, 1552
BmrFI CCNGG 2 cut(s) 705, 1437
BmsI GCATC 5 cut(s) 26, 859, 1420, 1619, 1664
BpiI GAAGAC 2 cut(s) 420, 1383
BplI GAGNNNNNCTC 2 cut(s) 495, 527
BpmI CTGGAG 1 cut(s) 726
Bpu10I CCTNAGC 2 cut(s) 53, 396
Bpu1102I GCTNAGC 1 cut(s) 230
BpuEI CTTGAG 3 cut(s) 547, 964, 1175
BpuMI CCSGG 1 cut(s) 1437
Bsa29I ATCGAT 1 cut(s) 1176
BsaAI YACGTR 1 cut(s) 346
BsaBI GATNNNNATC 4 cut(s) 257, 449, 744, 1224
BsaJI CCNNGG 2 cut(s) 302, 564
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 570, 1027
Bse1I ACTGG 3 cut(s) 138, 575, 761
Bse3DI GCAATG 5 cut(s) 234, 328, 1009, 1505, 1510
Bse8I GATNNNNATC 4 cut(s) 257, 449, 744, 1224
BseBI CCWGG 1 cut(s) 705
BseCI ATCGAT 1 cut(s) 1176
BseDI CCNNGG 2 cut(s) 302, 564
BseGI GGATG 4 cut(s) 258, 276, 416, 1198
BseJI GATNNNNATC 4 cut(s) 257, 449, 744, 1224
BseLI CCNNNNNNNGG 3 cut(s) 500, 570, 1027
BseMI GCAATG 5 cut(s) 234, 328, 1009, 1505, 1510
BseMII CTCAG 1 cut(s) 849
BseNI ACTGG 3 cut(s) 138, 575, 761
BseXI GCAGC 6 cut(s) 45, 175, 345, 674, 1278, 1649
BsgI GTGCAG 1 cut(s) 718
Bsh1236I CGCG 1 cut(s) 202
BshNI GGYRCC 1 cut(s) 584
BshVI ATCGAT 1 cut(s) 1176
BsiSI CCGG 2 cut(s) 783, 1436
BslFI GGGAC 1 cut(s) 1756
BslI CCNNNNNNNGG 3 cut(s) 500, 570, 1027
BsmAI GTCTC 5 cut(s) 15, 267, 702, 1338, 1731
BsmFI GGGAC 1 cut(s) 1756
BsmI GAATGC 1 cut(s) 593
Bsp1286I GDGCHC 1 cut(s) 508
Bsp143I GATC 9 cut(s) 3, 217, 444, 450, 954, 1017, 1177, 1225, 1522
Bsp1720I GCTNAGC 1 cut(s) 230
Bsp19I CCATGG 1 cut(s) 302
BspACI CCGC 5 cut(s) 170, 200, 280, 1092, 1702
BspCNI CTCAG 1 cut(s) 848
BspDI ATCGAT 1 cut(s) 1176
BspFNI CGCG 1 cut(s) 202
BspHI TCATGA 3 cut(s) 292, 447, 1132
BspLI GGNNCC 3 cut(s) 505, 586, 1552
BspPI GGATC 2 cut(s) 1012, 1530
BspT107I GGYRCC 1 cut(s) 584
BspTI CTTAAG 1 cut(s) 601
BsrBI CCGCTC 1 cut(s) 1702
BsrDI GCAATG 5 cut(s) 234, 328, 1009, 1505, 1510
BsrI ACTGG 3 cut(s) 138, 575, 761
BssECI CCNNGG 2 cut(s) 302, 564
BssMI GATC 9 cut(s) 3, 217, 444, 450, 954, 1017, 1177, 1225, 1522
BssNAI GTATAC 1 cut(s) 1477
BssSI CACGAG 1 cut(s) 1659
BssT1I CCWWGG 1 cut(s) 302
Bst1107I GTATAC 1 cut(s) 1477
Bst2BI CACGAG 1 cut(s) 1659
Bst2UI CCWGG 1 cut(s) 705
Bst4CI ACNGT 2 cut(s) 658, 1734
Bst6I CTCTTC 1 cut(s) 1045
BstAFI CTTAAG 1 cut(s) 601
BstAPI GCANNNNNTGC 2 cut(s) 196, 240
BstBAI YACGTR 1 cut(s) 346
BstC8I GCNNGC 4 cut(s) 22, 50, 241, 358
BstDEI CTNAG 5 cut(s) 53, 230, 396, 835, 1213
BstDSI CCRYGG 1 cut(s) 302
BstF5I GGATG 4 cut(s) 258, 276, 416, 1198
BstFNI CGCG 1 cut(s) 202
BstKTI GATC 9 cut(s) 6, 220, 447, 453, 957, 1020, 1180, 1228, 1525
BstMAI GTCTC 5 cut(s) 15, 267, 702, 1338, 1731
BstMBI GATC 9 cut(s) 3, 217, 444, 450, 954, 1017, 1177, 1225, 1522
BstMWI GCNNNNNNNGC 8 cut(s) 45, 58, 169, 196, 240, 357, 397, 1275
BstNI CCWGG 1 cut(s) 705
BstSCI CCNGG 2 cut(s) 703, 1435
BstSNI TACGTA 1 cut(s) 346
BstUI CGCG 1 cut(s) 202
BstV1I GCAGC 6 cut(s) 45, 175, 345, 674, 1278, 1649
BstV2I GAAGAC 2 cut(s) 420, 1383
BstZ17I GTATAC 1 cut(s) 1477
Bsu15I ATCGAT 1 cut(s) 1176
BsuTUI ATCGAT 1 cut(s) 1176
BtgI CCRYGG 1 cut(s) 302
BtsCI GGATG 4 cut(s) 258, 276, 416, 1198
BtsI GCAGTG 1 cut(s) 289
BtsIMutI CAGTG 1 cut(s) 289
Cac8I GCNNGC 4 cut(s) 22, 50, 241, 358
CciI TCATGA 3 cut(s) 292, 447, 1132
ClaI ATCGAT 1 cut(s) 1176
Csp6I GTAC 5 cut(s) 124, 153, 343, 654, 1624
CviAII CATG 7 cut(s) 184, 293, 303, 448, 717, 908, 1133
CviQI GTAC 5 cut(s) 124, 153, 343, 654, 1624
DdeI CTNAG 5 cut(s) 53, 230, 396, 835, 1213
DpnI GATC 9 cut(s) 5, 219, 446, 452, 956, 1019, 1179, 1227, 1524
DpnII GATC 9 cut(s) 3, 217, 444, 450, 954, 1017, 1177, 1225, 1522
Eam1104I CTCTTC 1 cut(s) 1045
EarI CTCTTC 1 cut(s) 1045
Eco105I TACGTA 1 cut(s) 346
Eco130I CCWWGG 1 cut(s) 302
Eco24I GRGCYC 1 cut(s) 508
Eco32I GATATC 1 cut(s) 181
Eco57I CTGAAG 1 cut(s) 1383
EcoRI GAATTC 1 cut(s) 296
EcoRII CCWGG 1 cut(s) 703
EcoRV GATATC 1 cut(s) 181
EcoT14I CCWWGG 1 cut(s) 302
EcoT22I ATGCAT 4 cut(s) 595, 970, 1450, 1657
EcoT38I GRGCYC 1 cut(s) 508
ErhI CCWWGG 1 cut(s) 302
FaeI CATG 7 cut(s) 187, 296, 306, 451, 720, 911, 1136
FalI AAGNNNNNCTT 2 cut(s) 809, 841
FaqI GGGAC 1 cut(s) 1756
FatI CATG 7 cut(s) 183, 292, 302, 447, 716, 907, 1132
FbaI TGATCA 4 cut(s) 217, 444, 450, 1225
FblI GTMKAC 5 cut(s) 484, 831, 897, 1170, 1476
Fnu4HI GCNGC 8 cut(s) 59, 164, 200, 334, 663, 1093, 1267, 1638
FokI GGATG 4 cut(s) 263, 265, 423, 1205
FriOI GRGCYC 1 cut(s) 508
Fsp4HI GCNGC 8 cut(s) 59, 164, 200, 334, 663, 1093, 1267, 1638
FspBI CTAG 1 cut(s) 1682
GluI GCNGC 8 cut(s) 59, 164, 200, 334, 663, 1093, 1267, 1638
GsuI CTGGAG 1 cut(s) 726
HapII CCGG 2 cut(s) 783, 1436
Hin1II CATG 7 cut(s) 187, 296, 306, 451, 720, 911, 1136
HindIII AAGCTT 3 cut(s) 50, 349, 823
HinfI GANTC 6 cut(s) 8, 641, 833, 992, 1357, 1566
HpaII CCGG 2 cut(s) 783, 1436
HphI GGTGA 5 cut(s) 1079, 1127, 1268, 1319, 1379
Hpy166II GTNNAC 8 cut(s) 485, 832, 898, 925, 961, 1171, 1477, 1752
Hpy188I TCNGA 7 cut(s) 209, 367, 546, 625, 1182, 1356, 1588
Hpy188III TCNNGA 9 cut(s) 176, 293, 448, 501, 981, 1133, 1154, 1361, 1661
Hpy8I GTNNAC 8 cut(s) 485, 832, 898, 925, 961, 1171, 1477, 1752
Hpy99I CGWCG 2 cut(s) 1148, 1493
HpyAV CCTTC 4 cut(s) 97, 1256, 1358, 1564
HpyCH4III ACNGT 2 cut(s) 658, 1734
HpyCH4IV ACGT 4 cut(s) 345, 921, 927, 1649
HpyF10VI GCNNNNNNNGC 8 cut(s) 45, 58, 169, 196, 240, 357, 397, 1275
HpyF3I CTNAG 5 cut(s) 53, 230, 396, 835, 1213
HpySE526I ACGT 4 cut(s) 345, 921, 927, 1649
Hsp92II CATG 7 cut(s) 187, 296, 306, 451, 720, 911, 1136
Ksp22I TGATCA 4 cut(s) 217, 444, 450, 1225
Kzo9I GATC 9 cut(s) 3, 217, 444, 450, 954, 1017, 1177, 1225, 1522
LmnI GCTCC 4 cut(s) 97, 187, 503, 1645
Lsp1109I GCAGC 6 cut(s) 45, 175, 345, 674, 1278, 1649
LweI GCATC 5 cut(s) 26, 859, 1420, 1619, 1664
MaeI CTAG 1 cut(s) 1682
MaeII ACGT 4 cut(s) 345, 921, 927, 1649
MaeIII GTNAC 6 cut(s) 306, 722, 838, 944, 1067, 1661
MalI GATC 9 cut(s) 5, 219, 446, 452, 956, 1019, 1179, 1227, 1524
MbiI CCGCTC 1 cut(s) 1702
MboI GATC 9 cut(s) 3, 217, 444, 450, 954, 1017, 1177, 1225, 1522
MboII GAAGA 9 cut(s) 125, 420, 771, 1059, 1062, 1229, 1388, 1406, 1439
MhlI GDGCHC 1 cut(s) 508
MlyI GAGTC 3 cut(s) 17, 827, 1575
MmeI TCCRAC 1 cut(s) 538
Mph1103I ATGCAT 4 cut(s) 595, 970, 1450, 1657
MseI TTAA 6 cut(s) 489, 602, 672, 930, 1350, 1443
MslI CAYNNNNRTG 1 cut(s) 1137
MspCI CTTAAG 1 cut(s) 601
MspI CCGG 2 cut(s) 783, 1436
MspR9I CCNGG 2 cut(s) 705, 1437
Mva1269I GAATGC 1 cut(s) 593
MvaI CCWGG 1 cut(s) 705
MvnI CGCG 1 cut(s) 202
MwoI GCNNNNNNNGC 8 cut(s) 45, 58, 169, 196, 240, 357, 397, 1275
NciI CCSGG 1 cut(s) 1437
NcoI CCATGG 1 cut(s) 302
NdeII GATC 9 cut(s) 3, 217, 444, 450, 954, 1017, 1177, 1225, 1522
NlaIII CATG 7 cut(s) 187, 296, 306, 451, 720, 911, 1136
NlaIV GGNNCC 3 cut(s) 505, 586, 1552
NmuCI GTSAC 4 cut(s) 722, 944, 1067, 1661
NsiI ATGCAT 4 cut(s) 595, 970, 1450, 1657
PagI TCATGA 3 cut(s) 292, 447, 1132
PctI GAATGC 1 cut(s) 593
PfeI GAWTC 3 cut(s) 641, 992, 1357
PflMI CCANNNNNTGG 1 cut(s) 1027
PkrI GCNGC 8 cut(s) 60, 165, 201, 335, 664, 1094, 1268, 1639
PleI GAGTC 3 cut(s) 16, 827, 1574
PpsI GAGTC 3 cut(s) 16, 827, 1574
Ppu21I YACGTR 1 cut(s) 346
PshBI ATTAAT 1 cut(s) 1350
Psp1406I AACGTT 1 cut(s) 927
Psp6I CCWGG 1 cut(s) 703
PspGI CCWGG 1 cut(s) 703
PspN4I GGNNCC 3 cut(s) 505, 586, 1552
RsaI GTAC 5 cut(s) 125, 154, 344, 655, 1625
RsaNI GTAC 5 cut(s) 124, 153, 343, 654, 1624
RseI CAYNNNNRTG 1 cut(s) 1137
SaqAI TTAA 6 cut(s) 489, 602, 672, 930, 1350, 1443
SatI GCNGC 8 cut(s) 59, 164, 200, 334, 663, 1093, 1267, 1638
Sau3AI GATC 9 cut(s) 3, 217, 444, 450, 954, 1017, 1177, 1225, 1522
SchI GAGTC 3 cut(s) 17, 827, 1575
ScrFI CCNGG 2 cut(s) 705, 1437
SduI GDGCHC 1 cut(s) 508
SfaNI GCATC 5 cut(s) 26, 859, 1420, 1619, 1664
SmiMI CAYNNNNRTG 1 cut(s) 1137
SmlI CTYRAG 4 cut(s) 526, 601, 979, 1154
SmoI CTYRAG 4 cut(s) 526, 601, 979, 1154
SnaBI TACGTA 1 cut(s) 346
SsiI CCGC 5 cut(s) 170, 200, 280, 1092, 1702
SspMI CTAG 1 cut(s) 1682
StyD4I CCNGG 2 cut(s) 703, 1435
StyI CCWWGG 1 cut(s) 302
TaaI ACNGT 2 cut(s) 658, 1734
TaiI ACGT 4 cut(s) 348, 924, 930, 1652
TaqI TCGA 5 cut(s) 6, 34, 597, 683, 1176
TatI WGTACW 1 cut(s) 123
TauI GCSGC 2 cut(s) 202, 1095
TfiI GAWTC 3 cut(s) 641, 992, 1357
Tru1I TTAA 6 cut(s) 489, 602, 672, 930, 1350, 1443
Tru9I TTAA 6 cut(s) 489, 602, 672, 930, 1350, 1443
TscAI CASTG 1 cut(s) 289
TseFI GTSAC 4 cut(s) 722, 944, 1067, 1661
TseI GCWGC 6 cut(s) 58, 163, 333, 662, 1266, 1637
Tsp45I GTSAC 4 cut(s) 722, 944, 1067, 1661
TspGWI ACGGA 1 cut(s) 1161
TspRI CASTG 1 cut(s) 289
Van91I CCANNNNNTGG 1 cut(s) 1027
Vha464I CTTAAG 1 cut(s) 601
VspI ATTAAT 1 cut(s) 1350
XapI RAATTY 4 cut(s) 296, 469, 877, 1615
XmiI GTMKAC 5 cut(s) 484, 831, 897, 1170, 1476
XspI CTAG 1 cut(s) 1682
Zsp2I ATGCAT 4 cut(s) 595, 970, 1450, 1657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.