FvH4_5g33551

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000144
Physical Location & Seq
Reverse (-)
24279339 .. 24282506
3168 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33551.t1

Sequence Viewer

Length: 1452 bp
ATGCGCCCAATCACCCAGTCCCCAGCGCTGTCGCCGTCGTCTCTTCTGTCGCAGCTCAACCTTGTCGTCCCACTCACCGGCGCCACCACCACTGCCTTCTCCCTCCTCCTCTTCCTCCTCGTCTGCTTCCGCAAAATCACCCGCAACCGCACCGCTCGGGAAGCCGACTCCAAGCCGCCTCACCACTTCTCCTACTCCCTCCTCCGACACGCCACCAACTCATTCTCCCCCACGTGCCGCCTCGGCCAGGGCGGCTCCGGGTCCGTGTTCCTCAGAACGCTCCAGCACGCCGGGAATGACGTCGCCAAACTACATGTGGATGTCATAGGGAACATCCTTGAGCGTCTCAACGTAGGTGATCGCATACGGTTGAGCATTGTCTCCAAACATTGGAACTCGATTGTTACACAAAGACATATCTGTGGTGCTCCACATGAACTCCCCTGGTTACTACTCCCTCACCCTAAAAGATGGGAATATCTGAGCTTTCTTAGTCTCTCCGAAGGTAAACTTGTCGAGTTGAAGAAGCTGCCTAAGTCGGTTCAAGGAGGCTGGGTTTATGGGTCTACTAATAAAGGTTCCTTGATCATAGTAAAGGAACAAGGACTTAAATCTGCTATGTTCCTAGTAAACCCAGTTTCAAGAGCTCTACACAAACTTCGTCCCTTGAAAACAATTCCATGTTTTCGGGAGTTTATAAAAACGAGGGAATGGAAGCGTTACGGTGCCAACTTTTTCTGCCCTCGCATTGCGACCTCTGGAGACAAAACATGGAGTGTCTTCCAGGTAATAGATAATGAGCAAGAAGATTGCCTTGTTGTTGATATATTGTTTTCTTGTGGGACTTTATATGCTTTGGTTCAGTGTCGTCAAAGGGATGGTGAAGTCCATGCTACACGAACTTTGAAGTTTGAAGACAATGGCTTGGAAGTGAAGTTGAAGTTGGTATTCGACAAGCATGAAATCTTGAACGGGAGCATTGATGAATATCATAGCAACTTTAAGGTCGAGTACAATCCAACCTACTGCTCAGCGTTATCAGAATCCACCAAAAATGAAGTCTTGGTAATTCATCAAATAAAAGACAATACTCTTTATAATCCAGACGCACCTCTCAATAATTCATGTTTGAGGACAACTAGTTTCAGGGCATATAAGATTGACCAATGCAAGGACAAGCTTGTCACGTTGCAATGCTTGGGGGACGAGCTGTTATTTTTAGGAGAAGGAGGATCATTTTCTCTTCCCAATAATGATTTCCAAGGAGTAGGAAAGAACCGCATTTATTTTGCAACACAATACAACATCCTATTCAAATCACCACTTACATCTCGAGAGTTTGGCATATTCTATTTAGATGACGGAAGAATTGAGCGGCCTTCTCTAGCTCGCGATCGAACTATCAACATGTCCCTGCTATATAAGCCTACATGGTTCATCCCATATTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

484

Amino Acids

54.88

Weight (kDa)

9.27

Isoelectric Point (pI)

30.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 104 - 138 1.4e-07 F-box domain
Beta-prop_KIB1-4 PF03478 163 - 432 1.1e-18 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 698, 1098
AasI GACNNNNNNGTC 1 cut(s) 1181
AatII GACGTC 1 cut(s) 303
AccB1I GGYRCC 2 cut(s) 80, 725
AccB7I CCANNNNNTGG 1 cut(s) 390
AccBSI CCGCTC 2 cut(s) 155, 1375
AccI GTMKAC 1 cut(s) 566
AccII CGCG 1 cut(s) 1392
AciI CCGC 9 cut(s) 130, 142, 148, 153, 176, 238, 252, 1279, 1375
AclWI GGATC 1 cut(s) 1240
AcoI YGGCCR 1 cut(s) 244
AcvI CACGTG 1 cut(s) 234
AcyI GRCGYC 2 cut(s) 81, 300
AfaI GTAC 1 cut(s) 1013
AfeI AGCGCT 1 cut(s) 27
AfiI CCNNNNNNNGG 4 cut(s) 77, 247, 390, 1171
AflIII ACRYGT 2 cut(s) 313, 1407
AgsI TTSAA 9 cut(s) 523, 545, 642, 670, 907, 914, 940, 970, 1315
AhlI ACTAGT 1 cut(s) 1139
AjnI CCWGG 3 cut(s) 246, 443, 783
AjuI GAANNNNNNNTTGG 4 cut(s) 926, 958, 1241, 1273
AluBI AGCT 7 cut(s) 55, 486, 529, 647, 1180, 1210, 1388
AluI AGCT 7 cut(s) 55, 486, 529, 647, 1180, 1210, 1388
Alw21I GWGCWC 2 cut(s) 430, 649
Alw26I GTCTC 5 cut(s) 45, 350, 385, 500, 756
AlwI GGATC 1 cut(s) 1240
Ama87I CYCGRG 2 cut(s) 156, 1332
Aor51HI AGCGCT 1 cut(s) 27
AoxI GGCC 2 cut(s) 244, 1376
ApeKI GCWGC 2 cut(s) 52, 529
ArsI GACNNNNNNTTYG 2 cut(s) 1044, 1076
AspLEI GCGC 3 cut(s) 6, 28, 83
AspS9I GGNCC 1 cut(s) 261
AsuC2I CCSGG 2 cut(s) 259, 292
AsuHPI GGTGA 8 cut(s) 4, 67, 130, 173, 368, 452, 893, 1311
AvaI CYCGRG 2 cut(s) 156, 1332
AvaII GGWCC 1 cut(s) 261
BanI GGYRCC 2 cut(s) 80, 725
BanII GRGCYC 1 cut(s) 649
BbrPI CACGTG 1 cut(s) 234
BbsI GAAGAC 2 cut(s) 772, 921
Bbv12I GWGCWC 2 cut(s) 430, 649
BbvI GCAGC 2 cut(s) 64, 516
BccI CCATC 2 cut(s) 465, 872
BceAI ACGGC 1 cut(s) 19
BciT130I CCWGG 3 cut(s) 248, 445, 785
BclI TGATCA 1 cut(s) 585
BcnI CCSGG 2 cut(s) 259, 292
BcoDI GTCTC 5 cut(s) 45, 350, 385, 500, 756
BcuI ACTAGT 1 cut(s) 1139
BfaI CTAG 4 cut(s) 626, 1140, 1385, 1450
BfoI RGCGCY 2 cut(s) 29, 84
BglI GCCNNNNNGGC 2 cut(s) 243, 252
BisI GCNGC 6 cut(s) 53, 176, 238, 253, 530, 1376
BlpI GCTNAGC 1 cut(s) 1030
BlsI GCNGC 6 cut(s) 54, 177, 239, 254, 531, 1377
Bme1390I CCNGG 5 cut(s) 248, 259, 292, 445, 785
Bme18I GGWCC 1 cut(s) 261
BmeT110I CYCGRG 2 cut(s) 156, 1332
BmgT120I GGNCC 1 cut(s) 261
BmiI GGNNCC 5 cut(s) 82, 256, 262, 580, 727
BmrFI CCNGG 5 cut(s) 248, 259, 292, 445, 785
BmrI ACTGGG 2 cut(s) 10, 629
BmuI ACTGGG 2 cut(s) 10, 629
BpiI GAAGAC 2 cut(s) 772, 921
BpmI CTGGAG 2 cut(s) 266, 780
Bpu1102I GCTNAGC 1 cut(s) 1030
BpuEI CTTGAG 1 cut(s) 359
BpuMI CCSGG 2 cut(s) 259, 292
BsaAI YACGTR 1 cut(s) 234
BsaBI GATNNNNATC 1 cut(s) 987
BsaHI GRCGYC 2 cut(s) 81, 300
BsaJI CCNNGG 4 cut(s) 241, 247, 443, 1261
BsaXI ACNNNNNCTCC 8 cut(s) 173, 203, 209, 239, 423, 453, 540, 570
Bsc4I CCNNNNNNNGG 4 cut(s) 77, 247, 390, 1171
Bse118I RCCGGY 1 cut(s) 77
Bse1I ACTGG 2 cut(s) 16, 635
Bse3DI GCAATG 2 cut(s) 747, 1199
Bse8I GATNNNNATC 1 cut(s) 987
BseBI CCWGG 3 cut(s) 248, 445, 785
BseDI CCNNGG 4 cut(s) 241, 247, 443, 1261
BseGI GGATG 5 cut(s) 325, 333, 883, 1305, 1437
BseJI GATNNNNATC 1 cut(s) 987
BseLI CCNNNNNNNGG 4 cut(s) 77, 247, 390, 1171
BseMI GCAATG 2 cut(s) 747, 1199
BseMII CTCAG 3 cut(s) 286, 473, 1044
BseNI ACTGG 2 cut(s) 16, 635
BseRI GAGGAG 4 cut(s) 95, 98, 107, 191
BseXI GCAGC 2 cut(s) 64, 516
BseYI CCCAGC 2 cut(s) 22, 552
Bsh1236I CGCG 1 cut(s) 1392
Bsh1285I CGRYCG 1 cut(s) 1396
BshFI GGCC 2 cut(s) 246, 1378
BshNI GGYRCC 2 cut(s) 80, 725
BsiEI CGRYCG 1 cut(s) 1396
BsiHKAI GWGCWC 2 cut(s) 430, 649
BsiHKCI CYCGRG 2 cut(s) 156, 1332
BsiSI CCGG 3 cut(s) 78, 258, 291
BslFI GGGAC 6 cut(s) 4, 53, 648, 856, 1217, 1396
BslI CCNNNNNNNGG 4 cut(s) 77, 247, 390, 1171
BsmAI GTCTC 5 cut(s) 45, 350, 385, 500, 756
BsmBI CGTCTC 2 cut(s) 45, 350
BsmFI GGGAC 6 cut(s) 4, 53, 648, 856, 1217, 1396
BsnI GGCC 2 cut(s) 246, 1378
BsoBI CYCGRG 2 cut(s) 156, 1332
Bsp1286I GDGCHC 2 cut(s) 430, 649
Bsp143I GATC 4 cut(s) 358, 585, 1232, 1393
Bsp1720I GCTNAGC 1 cut(s) 1030
Bsp68I TCGCGA 1 cut(s) 1392
BspACI CCGC 9 cut(s) 130, 142, 148, 153, 176, 238, 252, 1279, 1375
BspANI GGCC 2 cut(s) 246, 1378
BspCNI CTCAG 3 cut(s) 285, 474, 1043
BspFNI CGCG 1 cut(s) 1392
BspLI GGNNCC 5 cut(s) 82, 256, 262, 580, 727
BspPI GGATC 1 cut(s) 1240
BspT107I GGYRCC 2 cut(s) 80, 725
BsrBI CCGCTC 2 cut(s) 155, 1375
BsrDI GCAATG 2 cut(s) 747, 1199
BsrFI RCCGGY 1 cut(s) 77
BsrI ACTGG 2 cut(s) 16, 635
BssAI RCCGGY 1 cut(s) 77
BssECI CCNNGG 4 cut(s) 241, 247, 443, 1261
BssMI GATC 4 cut(s) 358, 585, 1232, 1393
BssNI GRCGYC 2 cut(s) 81, 300
BssT1I CCWWGG 1 cut(s) 1261
Bst2UI CCWGG 3 cut(s) 248, 445, 785
Bst4CI ACNGT 2 cut(s) 369, 725
Bst6I CTCTTC 3 cut(s) 48, 116, 1248
BstACI GRCGYC 2 cut(s) 81, 300
BstBAI YACGTR 1 cut(s) 234
BstC8I GCNNGC 2 cut(s) 288, 1390
BstDEI CTNAG 5 cut(s) 272, 482, 491, 534, 1030
BstENI CCTNNNNNAGG 1 cut(s) 245
BstF5I GGATG 5 cut(s) 325, 333, 883, 1305, 1437
BstFNI CGCG 1 cut(s) 1392
BstH2I RGCGCY 2 cut(s) 29, 84
BstHHI GCGC 3 cut(s) 6, 28, 83
BstKTI GATC 4 cut(s) 361, 588, 1235, 1396
BstMAI GTCTC 5 cut(s) 45, 350, 385, 500, 756
BstMBI GATC 4 cut(s) 358, 585, 1232, 1393
BstMCI CGRYCG 1 cut(s) 1396
BstMWI GCNNNNNNNGC 4 cut(s) 161, 243, 252, 1423
BstNI CCWGG 3 cut(s) 248, 445, 785
BstNSI RCATGY 2 cut(s) 317, 1411
BstSCI CCNGG 5 cut(s) 246, 257, 290, 443, 783
BstUI CGCG 1 cut(s) 1392
BstV1I GCAGC 2 cut(s) 64, 516
BstV2I GAAGAC 2 cut(s) 772, 921
BsuRI GGCC 2 cut(s) 246, 1378
BtsCI GGATG 5 cut(s) 325, 333, 883, 1305, 1437
BtsI GCAGTG 1 cut(s) 90
BtsIMutI CAGTG 2 cut(s) 90, 869
BtuMI TCGCGA 1 cut(s) 1392
Cac8I GCNNGC 2 cut(s) 288, 1390
CfoI GCGC 3 cut(s) 6, 28, 83
Cfr10I RCCGGY 1 cut(s) 77
Cfr13I GGNCC 1 cut(s) 261
CseI GACGC 2 cut(s) 332, 1115
Csp6I GTAC 1 cut(s) 1012
CviAII CATG 9 cut(s) 314, 434, 681, 771, 890, 959, 1125, 1408, 1431
CviQI GTAC 1 cut(s) 1012
DdeI CTNAG 5 cut(s) 272, 482, 491, 534, 1030
DinI GGCGCC 1 cut(s) 82
DpnI GATC 4 cut(s) 360, 587, 1234, 1395
DpnII GATC 4 cut(s) 358, 585, 1232, 1393
DrdI GACNNNNNNGTC 1 cut(s) 1181
DseDI GACNNNNNNGTC 1 cut(s) 1181
EaeI YGGCCR 1 cut(s) 244
Eam1104I CTCTTC 3 cut(s) 48, 116, 1248
EarI CTCTTC 3 cut(s) 48, 116, 1248
Ecl136II GAGCTC 1 cut(s) 647
Eco130I CCWWGG 1 cut(s) 1261
Eco24I GRGCYC 1 cut(s) 649
Eco47I GGWCC 1 cut(s) 261
Eco47III AGCGCT 1 cut(s) 27
Eco53kI GAGCTC 1 cut(s) 647
Eco72I CACGTG 1 cut(s) 234
Eco88I CYCGRG 2 cut(s) 156, 1332
EcoICRI GAGCTC 1 cut(s) 647
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoRII CCWGG 3 cut(s) 246, 443, 783
EcoT14I CCWWGG 1 cut(s) 1261
EcoT38I GRGCYC 1 cut(s) 649
EgeI GGCGCC 1 cut(s) 82
EheI GGCGCC 1 cut(s) 82
ErhI CCWWGG 1 cut(s) 1261
Esp3I CGTCTC 2 cut(s) 45, 350
FaeI CATG 9 cut(s) 317, 437, 684, 774, 893, 962, 1128, 1411, 1434
FalI AAGNNNNNCTT 4 cut(s) 495, 527, 798, 830
FaqI GGGAC 6 cut(s) 4, 53, 648, 856, 1217, 1396
FatI CATG 9 cut(s) 313, 433, 680, 770, 889, 958, 1124, 1407, 1430
FauI CCCGC 1 cut(s) 149
FbaI TGATCA 1 cut(s) 585
FblI GTMKAC 1 cut(s) 566
Fnu4HI GCNGC 6 cut(s) 53, 176, 238, 253, 530, 1376
FokI GGATG 5 cut(s) 320, 332, 890, 1292, 1424
FriOI GRGCYC 1 cut(s) 649
Fsp4HI GCNGC 6 cut(s) 53, 176, 238, 253, 530, 1376
FspBI CTAG 4 cut(s) 626, 1140, 1385, 1450
GlaI GCGC 3 cut(s) 5, 27, 82
GluI GCNGC 6 cut(s) 53, 176, 238, 253, 530, 1376
GsaI CCCAGC 2 cut(s) 26, 556
GsuI CTGGAG 2 cut(s) 266, 780
HaeII RGCGCY 2 cut(s) 29, 84
HaeIII GGCC 2 cut(s) 246, 1378
HapII CCGG 3 cut(s) 78, 258, 291
HgaI GACGC 2 cut(s) 332, 1115
HhaI GCGC 3 cut(s) 6, 28, 83
Hin1I GRCGYC 2 cut(s) 81, 300
Hin1II CATG 9 cut(s) 317, 437, 684, 774, 893, 962, 1128, 1411, 1434
Hin6I GCGC 3 cut(s) 4, 26, 81
HinP1I GCGC 3 cut(s) 4, 26, 81
HindIII AAGCTT 1 cut(s) 1178
HinfI GANTC 2 cut(s) 167, 1043
HpaII CCGG 3 cut(s) 78, 258, 291
HphI GGTGA 8 cut(s) 4, 67, 130, 173, 368, 452, 893, 1311
Hpy166II GTNNAC 3 cut(s) 509, 567, 631
Hpy188I TCNGA 5 cut(s) 206, 275, 483, 502, 1042
Hpy188III TCNNGA 9 cut(s) 158, 642, 689, 759, 967, 1103, 1332, 1334, 1391
Hpy8I GTNNAC 3 cut(s) 509, 567, 631
Hpy99I CGWCG 2 cut(s) 40, 305
HpyAV CCTTC 4 cut(s) 106, 497, 1220, 1389
HpyCH4III ACNGT 2 cut(s) 369, 725
HpyCH4IV ACGT 4 cut(s) 233, 300, 351, 1187
HpyCH4V TGCA 3 cut(s) 1170, 1192, 1292
HpyF10VI GCNNNNNNNGC 4 cut(s) 161, 243, 252, 1423
HpyF3I CTNAG 5 cut(s) 272, 482, 491, 534, 1030
HpySE526I ACGT 4 cut(s) 233, 300, 351, 1187
Hsp92I GRCGYC 2 cut(s) 81, 300
Hsp92II CATG 9 cut(s) 317, 437, 684, 774, 893, 962, 1128, 1411, 1434
HspAI GCGC 3 cut(s) 4, 26, 81
KasI GGCGCC 1 cut(s) 80
Ksp22I TGATCA 1 cut(s) 585
Kzo9I GATC 4 cut(s) 358, 585, 1232, 1393
LmnI GCTCC 4 cut(s) 260, 285, 433, 975
Lsp1109I GCAGC 2 cut(s) 64, 516
MaeI CTAG 4 cut(s) 626, 1140, 1385, 1450
MaeII ACGT 4 cut(s) 233, 300, 351, 1187
MaeIII GTNAC 4 cut(s) 403, 447, 719, 1183
MalI GATC 4 cut(s) 360, 587, 1234, 1395
MbiI CCGCTC 2 cut(s) 155, 1375
MboI GATC 4 cut(s) 358, 585, 1232, 1393
MboII GAAGA 8 cut(s) 35, 103, 535, 772, 818, 926, 1235, 1377
MhlI GDGCHC 2 cut(s) 430, 649
MluCI AATT 4 cut(s) 675, 1068, 1120, 1368
Mly113I GGCGCC 1 cut(s) 81
MlyI GAGTC 1 cut(s) 161
MmeI TCCRAC 2 cut(s) 229, 1043
MseI TTAA 2 cut(s) 609, 1002
MslI CAYNNNNRTG 2 cut(s) 318, 420
MspI CCGG 3 cut(s) 78, 258, 291
MspR9I CCNGG 5 cut(s) 248, 259, 292, 445, 785
MvaI CCWGG 3 cut(s) 248, 445, 785
MvnI CGCG 1 cut(s) 1392
MwoI GCNNNNNNNGC 4 cut(s) 161, 243, 252, 1423
NarI GGCGCC 1 cut(s) 81
NciI CCSGG 2 cut(s) 259, 292
NdeII GATC 4 cut(s) 358, 585, 1232, 1393
NlaIII CATG 9 cut(s) 317, 437, 684, 774, 893, 962, 1128, 1411, 1434
NlaIV GGNNCC 5 cut(s) 82, 256, 262, 580, 727
NmeAIII GCCGAG 1 cut(s) 222
NmuCI GTSAC 1 cut(s) 1183
NruI TCGCGA 1 cut(s) 1392
NspI RCATGY 2 cut(s) 317, 1411
PaeR7I CTCGAG 1 cut(s) 1332
PciI ACATGT 2 cut(s) 313, 1407
PfeI GAWTC 1 cut(s) 1043
PflMI CCANNNNNTGG 1 cut(s) 390
PkrI GCNGC 6 cut(s) 54, 177, 239, 254, 531, 1377
Ple19I CGATCG 1 cut(s) 1396
PleI GAGTC 1 cut(s) 161
PluTI GGCGCC 1 cut(s) 84
PmaCI CACGTG 1 cut(s) 234
PmlI CACGTG 1 cut(s) 234
PpsI GAGTC 1 cut(s) 161
Ppu21I YACGTR 1 cut(s) 234
PscI ACATGT 2 cut(s) 313, 1407
PsiI TTATAA 2 cut(s) 698, 1098
Psp124BI GAGCTC 1 cut(s) 649
Psp6I CCWGG 3 cut(s) 246, 443, 783
PspCI CACGTG 1 cut(s) 234
PspFI CCCAGC 2 cut(s) 22, 552
PspGI CCWGG 3 cut(s) 246, 443, 783
PspN4I GGNNCC 5 cut(s) 82, 256, 262, 580, 727
PspPI GGNCC 1 cut(s) 261
PvuI CGATCG 1 cut(s) 1396
RruI TCGCGA 1 cut(s) 1392
RsaI GTAC 1 cut(s) 1013
RsaNI GTAC 1 cut(s) 1012
RseI CAYNNNNRTG 2 cut(s) 318, 420
SacI GAGCTC 1 cut(s) 649
SaqAI TTAA 2 cut(s) 609, 1002
SatI GCNGC 6 cut(s) 53, 176, 238, 253, 530, 1376
Sau3AI GATC 4 cut(s) 358, 585, 1232, 1393
Sau96I GGNCC 1 cut(s) 261
SchI GAGTC 1 cut(s) 161
ScrFI CCNGG 5 cut(s) 248, 259, 292, 445, 785
SduI GDGCHC 2 cut(s) 430, 649
SfoI GGCGCC 1 cut(s) 82
Sfr274I CTCGAG 1 cut(s) 1332
SgrAI CRCCGGYG 1 cut(s) 77
SinI GGWCC 1 cut(s) 261
SlaI CTCGAG 1 cut(s) 1332
SmiMI CAYNNNNRTG 2 cut(s) 318, 420
SmlI CTYRAG 2 cut(s) 338, 1332
SmoI CTYRAG 2 cut(s) 338, 1332
SpeI ACTAGT 1 cut(s) 1139
Sse9I AATT 4 cut(s) 675, 1068, 1120, 1368
SsiI CCGC 9 cut(s) 130, 142, 148, 153, 176, 238, 252, 1279, 1375
SspDI GGCGCC 1 cut(s) 80
SspMI CTAG 4 cut(s) 626, 1140, 1385, 1450
SstI GAGCTC 1 cut(s) 649
StyD4I CCNGG 5 cut(s) 246, 257, 290, 443, 783
StyI CCWWGG 1 cut(s) 1261
TaaI ACNGT 2 cut(s) 369, 725
TaiI ACGT 4 cut(s) 236, 303, 354, 1190
TaqI TCGA 6 cut(s) 398, 516, 951, 1008, 1333, 1396
TasI AATT 4 cut(s) 675, 1068, 1120, 1368
TatI WGTACW 1 cut(s) 1011
TauI GCSGC 4 cut(s) 178, 240, 255, 1378
TfiI GAWTC 1 cut(s) 1043
Tru1I TTAA 2 cut(s) 609, 1002
Tru9I TTAA 2 cut(s) 609, 1002
TscAI CASTG 2 cut(s) 97, 869
TseFI GTSAC 1 cut(s) 1183
TseI GCWGC 2 cut(s) 52, 529
Tsp45I GTSAC 1 cut(s) 1183
TspDTI ATGAA 7 cut(s) 450, 975, 999, 1061, 1071, 1113, 1426
TspGWI ACGGA 2 cut(s) 253, 1377
TspRI CASTG 2 cut(s) 97, 869
Van91I CCANNNNNTGG 1 cut(s) 390
VpaK11BI GGWCC 1 cut(s) 261
XagI CCTNNNNNAGG 1 cut(s) 245
XceI RCATGY 2 cut(s) 317, 1411
XcmI CCANNNNNNNNNTGG 1 cut(s) 313
XhoI CTCGAG 1 cut(s) 1332
XmiI GTMKAC 1 cut(s) 566
XspI CTAG 4 cut(s) 626, 1140, 1385, 1450
ZraI GACGTC 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.