RchiOBHm_Chr6g0254681

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000144
Physical Location & Seq
Forward (+)
9634051 .. 9635577
1527 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22844

Sequence Viewer

Length: 1527 bp
ATGTCAATCGTTATGCGTAGAGACATCCGCAGTGCTTCTCATGAATTCCCATGGTTACTACTCCCCCAAACCCCACATTGCAGCAACAAGTACGTAAGCTTTGCCAGCGTGTCAGAGGGGAGAGTTGTCAAGTTGAAGCTACCTAAGCAAGTTCGTGGATGGTGGATTTATGGGTCTTCTAAAGGTTGGTTGATCCTGATCAAGGAAAGAGGTCTAAATTCCAAGATGTGTCTACTTAACCCAATTTCACGAGCGCTACTCCAACTTCCACCCTTGAGAACACTTCCTTTTCTGAAAGATTTTGTGAAAACCGAGGACTGGAAACTTTTTGGTGCCAATGCATTCGACTTAAGCATTGCACTATCAACCTCTGATGGAATTGCTTTAGATTCAAAGCGTTGTACGGTAGCAGCAGTTTTTAATGATAAGTCGAAATTGAGTTTGTGCAGACCTGGAGACAGAACATGGAGTGACTTTCAAGTATTAGATACTAATCAAAACGACTGGATTGCTGATTTATTGTTTTCTTCCGGCAGTCTTTATGTTTTGGTTTGTAGTAGTCAAAAGGAAAGCTTTGTGGATTCAGTTACTCAAACCTTGAACTTTGGCTTTAGAGGTGCAGAAAATTTGAAAATGAAGTTGGTCTACGACAAGCGTGAAAACAGGAACCGGAACGTTAATGAATGTCATAGTGACTATATGATCGCTTACAATGCAACATACAGCTCAATGTTGTTAGAATCAACCAGCAATGAAGTCTTATTGATCCATAAAATGGTAGATTATGTTGTGGGAAGAGGGGAGGATATTATTGGTGACAATAATGAGAATAATGTCGGCGGCAATATGGAGAATGATGATGGTGAGCAACACATTCATCATGATAATGACGACGGAAATCTTGAGGTTGATGAGGTAGACATTTATCAGAATGATGCGGGTGATGAGGAAGCCAACAACTTAGAAGATAATGCTCAGCAAAATGGAGGAAACATTACTTATGGTGATGAAGGCAGTAATGAGAATGATGGTGGCGACAGCAATATGGAAAATGATGATGGTGGTGAAGGCAATAACGACAATAATGATGTTGATGTGGGAGACATTGATCAGAATCCTGAAGGTGATGAGGAAGACAACAATAACCCAGAAGATAATGGTCAGCAAGGAGAAACTATTGATGAAAATGCACCGGGATTTAATGCATATATAACAACAAGGAGTTTTAGAGTATACAAGATTGACGACGACAGCTTTATTCCATTGCAATGCTTGGGGGATCAATTATTCTTTTCTGGAGATTGTGGTTCCTTCTCCTTTGGAATCAGTAATATGAAAAAATCAGAAAGGAATTGTATTTATTTTGCATCAAATATGATGTACGATTGGGAGGCAGCTCCAAAAACGTATGCATCTCGTGAGATTGGTATATTCTACCTAGATAGCCAAAGAATTGAGCGGTCCTTTCCAAGTGTTGAGATGTCTCTACGGTATCAAGGGACTTGGTTCACTCCAAGTTTATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

508

Amino Acids

57.26

Weight (kDa)

4.45

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 34 - 325 3.5e-21 KIB1-4 beta-propeller
Beta-prop_KIB1-4 PF03478 405 - 478 6.7e-07 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 332
AccB7I CCANNNNNTGG 1 cut(s) 775
AccBSI CCGCTC 1 cut(s) 1459
AccI GTMKAC 4 cut(s) 232, 645, 918, 1233
AciI CCGC 4 cut(s) 28, 840, 938, 1459
AclI AACGTT 1 cut(s) 675
AclWI GGATC 3 cut(s) 187, 760, 1287
AcsI RAATTY 3 cut(s) 44, 217, 625
AcuI CTGAAG 1 cut(s) 1140
AfaI GTAC 3 cut(s) 92, 403, 1382
AfeI AGCGCT 1 cut(s) 255
AfiI CCNNNNNNNGG 3 cut(s) 202, 318, 775
AflII CTTAAG 1 cut(s) 349
AgsI TTSAA 5 cut(s) 136, 393, 479, 601, 631
AjnI CCWGG 1 cut(s) 451
AjuI GAANNNNNNNTTGG 2 cut(s) 623, 655
AluBI AGCT 6 cut(s) 99, 139, 573, 726, 1254, 1397
AluI AGCT 6 cut(s) 99, 139, 573, 726, 1254, 1397
Alw26I GTCTC 4 cut(s) 15, 450, 1095, 1488
AlwI GGATC 3 cut(s) 187, 760, 1287
Aor51HI AGCGCT 1 cut(s) 255
ApeKI GCWGC 3 cut(s) 81, 410, 1394
ApoI RAATTY 3 cut(s) 44, 217, 625
AspLEI GCGC 1 cut(s) 256
AspS9I GGNCC 1 cut(s) 1461
AsuC2I CCSGG 1 cut(s) 1194
AsuHPI GGTGA 6 cut(s) 827, 875, 953, 1016, 1076, 1136
AvaII GGWCC 1 cut(s) 1461
BanI GGYRCC 1 cut(s) 332
BarI GAAGNNNNNNTAC 2 cut(s) 629, 661
BauI CACGAG 2 cut(s) 249, 1416
BbsI GAAGAC 2 cut(s) 168, 1140
BbvI GCAGC 3 cut(s) 93, 422, 1406
BccI CCATC 5 cut(s) 153, 368, 854, 1022, 1052
BcgI CGANNNNNNTGC 2 cut(s) 491, 525
BciT130I CCWGG 1 cut(s) 453
BclI TGATCA 2 cut(s) 198, 1108
BcnI CCSGG 1 cut(s) 1194
BcoDI GTCTC 4 cut(s) 15, 450, 1095, 1488
BfaI CTAG 1 cut(s) 1439
BfoI RGCGCY 1 cut(s) 257
BfrI CTTAAG 1 cut(s) 349
BisI GCNGC 4 cut(s) 82, 411, 841, 1395
BlpI GCTNAGC 1 cut(s) 975
BlsI GCNGC 4 cut(s) 83, 412, 842, 1396
Bme1390I CCNGG 2 cut(s) 453, 1194
Bme18I GGWCC 1 cut(s) 1461
BmgT120I GGNCC 1 cut(s) 1461
BmiI GGNNCC 3 cut(s) 334, 668, 1309
BmrFI CCNGG 2 cut(s) 453, 1194
BmsI GCATC 3 cut(s) 925, 1376, 1421
BpiI GAAGAC 2 cut(s) 168, 1140
BplI GAGNNNNNCTC 2 cut(s) 243, 275
BpmI CTGGAG 2 cut(s) 474, 1317
Bpu10I CCTNAGC 1 cut(s) 144
Bpu1102I GCTNAGC 1 cut(s) 975
BpuEI CTTGAG 2 cut(s) 295, 923
BpuMI CCSGG 1 cut(s) 1194
BsaAI YACGTR 1 cut(s) 94
BsaBI GATNNNNATC 3 cut(s) 197, 492, 1113
BsaJI CCNNGG 2 cut(s) 50, 312
BsaWI WCCGGW 1 cut(s) 669
Bsc4I CCNNNNNNNGG 3 cut(s) 202, 318, 775
Bse1I ACTGG 2 cut(s) 323, 509
Bse3DI GCAATG 5 cut(s) 76, 354, 757, 1262, 1274
Bse8I GATNNNNATC 3 cut(s) 197, 492, 1113
BseBI CCWGG 1 cut(s) 453
BseDI CCNNGG 2 cut(s) 50, 312
BseGI GGATG 2 cut(s) 24, 164
BseJI GATNNNNATC 3 cut(s) 197, 492, 1113
BseLI CCNNNNNNNGG 3 cut(s) 202, 318, 775
BseMI GCAATG 5 cut(s) 76, 354, 757, 1262, 1274
BseMII CTCAG 1 cut(s) 989
BseNI ACTGG 2 cut(s) 323, 509
BseXI GCAGC 3 cut(s) 93, 422, 1406
BsgI GTGCAG 2 cut(s) 466, 639
BshNI GGYRCC 1 cut(s) 332
BsiSI CCGG 3 cut(s) 531, 670, 1193
BslFI GGGAC 1 cut(s) 1513
BslI CCNNNNNNNGG 3 cut(s) 202, 318, 775
BsmAI GTCTC 4 cut(s) 15, 450, 1095, 1488
BsmFI GGGAC 1 cut(s) 1513
BsmI GAATGC 1 cut(s) 341
Bsp143I GATC 6 cut(s) 192, 198, 702, 765, 1108, 1279
Bsp1720I GCTNAGC 1 cut(s) 975
Bsp19I CCATGG 1 cut(s) 50
BspACI CCGC 4 cut(s) 28, 840, 938, 1459
BspCNI CTCAG 1 cut(s) 988
BspHI TCATGA 2 cut(s) 40, 880
BspLI GGNNCC 3 cut(s) 334, 668, 1309
BspPI GGATC 3 cut(s) 187, 760, 1287
BspT107I GGYRCC 1 cut(s) 332
BspTI CTTAAG 1 cut(s) 349
BsrBI CCGCTC 1 cut(s) 1459
BsrDI GCAATG 5 cut(s) 76, 354, 757, 1262, 1274
BsrI ACTGG 2 cut(s) 323, 509
BssECI CCNNGG 2 cut(s) 50, 312
BssMI GATC 6 cut(s) 192, 198, 702, 765, 1108, 1279
BssNAI GTATAC 1 cut(s) 1234
BssSI CACGAG 2 cut(s) 249, 1416
BssT1I CCWWGG 1 cut(s) 50
Bst1107I GTATAC 1 cut(s) 1234
Bst2BI CACGAG 2 cut(s) 249, 1416
Bst2UI CCWGG 1 cut(s) 453
Bst4CI ACNGT 2 cut(s) 406, 1491
Bst6I CTCTTC 1 cut(s) 790
BstAFI CTTAAG 1 cut(s) 349
BstBAI YACGTR 1 cut(s) 94
BstC8I GCNNGC 1 cut(s) 106
BstDEI CTNAG 3 cut(s) 144, 961, 975
BstDSI CCRYGG 1 cut(s) 50
BstENI CCTNNNNNAGG 1 cut(s) 200
BstF5I GGATG 2 cut(s) 24, 164
BstH2I RGCGCY 1 cut(s) 257
BstHHI GCGC 1 cut(s) 256
BstKTI GATC 6 cut(s) 195, 201, 705, 768, 1111, 1282
BstMAI GTCTC 4 cut(s) 15, 450, 1095, 1488
BstMBI GATC 6 cut(s) 192, 198, 702, 765, 1108, 1279
BstMWI GCNNNNNNNGC 3 cut(s) 105, 145, 713
BstNI CCWGG 1 cut(s) 453
BstSCI CCNGG 2 cut(s) 451, 1192
BstSNI TACGTA 1 cut(s) 94
BstV1I GCAGC 3 cut(s) 93, 422, 1406
BstV2I GAAGAC 2 cut(s) 168, 1140
BstZ17I GTATAC 1 cut(s) 1234
BtgI CCRYGG 1 cut(s) 50
BtsCI GGATG 2 cut(s) 24, 164
BtsI GCAGTG 1 cut(s) 37
BtsIMutI CAGTG 1 cut(s) 37
Cac8I GCNNGC 1 cut(s) 106
CciI TCATGA 2 cut(s) 40, 880
CfoI GCGC 1 cut(s) 256
Cfr13I GGNCC 1 cut(s) 1461
Csp6I GTAC 3 cut(s) 91, 402, 1381
CviAII CATG 4 cut(s) 41, 51, 465, 881
CviJI RGCY 9 cut(s) 99, 139, 573, 609, 726, 953, 1254, 1397, 1446
CviKI_1 RGCY 9 cut(s) 99, 139, 573, 609, 726, 953, 1254, 1397, 1446
CviQI GTAC 3 cut(s) 91, 402, 1381
DdeI CTNAG 3 cut(s) 144, 961, 975
DpnI GATC 6 cut(s) 194, 200, 704, 767, 1110, 1281
DpnII GATC 6 cut(s) 192, 198, 702, 765, 1108, 1279
Eam1104I CTCTTC 1 cut(s) 790
EarI CTCTTC 1 cut(s) 790
Eco105I TACGTA 1 cut(s) 94
Eco130I CCWWGG 1 cut(s) 50
Eco47I GGWCC 1 cut(s) 1461
Eco47III AGCGCT 1 cut(s) 255
Eco57I CTGAAG 1 cut(s) 1140
EcoNI CCTNNNNNAGG 1 cut(s) 200
EcoRI GAATTC 1 cut(s) 44
EcoRII CCWGG 1 cut(s) 451
EcoT14I CCWWGG 1 cut(s) 50
EcoT22I ATGCAT 3 cut(s) 343, 1207, 1414
ErhI CCWWGG 1 cut(s) 50
FaeI CATG 4 cut(s) 44, 54, 468, 884
FalI AAGNNNNNCTT 2 cut(s) 557, 589
FaqI GGGAC 1 cut(s) 1513
FatI CATG 4 cut(s) 40, 50, 464, 880
FauI CCCGC 1 cut(s) 931
FbaI TGATCA 2 cut(s) 198, 1108
FblI GTMKAC 4 cut(s) 232, 645, 918, 1233
Fnu4HI GCNGC 4 cut(s) 82, 411, 841, 1395
FokI GGATG 2 cut(s) 11, 171
Fsp4HI GCNGC 4 cut(s) 82, 411, 841, 1395
FspBI CTAG 1 cut(s) 1439
GlaI GCGC 1 cut(s) 255
GluI GCNGC 4 cut(s) 82, 411, 841, 1395
GsuI CTGGAG 2 cut(s) 474, 1317
HaeII RGCGCY 1 cut(s) 257
HapII CCGG 3 cut(s) 531, 670, 1193
HhaI GCGC 1 cut(s) 256
Hin1II CATG 4 cut(s) 44, 54, 468, 884
Hin6I GCGC 1 cut(s) 254
HinP1I GCGC 1 cut(s) 254
HindIII AAGCTT 2 cut(s) 97, 571
HinfI GANTC 5 cut(s) 389, 581, 740, 1114, 1323
HpaII CCGG 3 cut(s) 531, 670, 1193
HphI GGTGA 6 cut(s) 827, 875, 953, 1016, 1076, 1136
Hpy166II GTNNAC 5 cut(s) 233, 646, 919, 1234, 1509
Hpy188I TCNGA 6 cut(s) 115, 294, 373, 930, 1113, 1345
Hpy188III TCNNGA 8 cut(s) 41, 196, 249, 881, 902, 1118, 1296, 1418
Hpy8I GTNNAC 5 cut(s) 233, 646, 919, 1234, 1509
Hpy99I CGWCG 2 cut(s) 896, 1250
HpyAV CCTTC 4 cut(s) 1004, 1061, 1115, 1321
HpyCH4III ACNGT 2 cut(s) 406, 1491
HpyCH4IV ACGT 3 cut(s) 93, 675, 1406
HpyF10VI GCNNNNNNNGC 3 cut(s) 105, 145, 713
HpyF3I CTNAG 3 cut(s) 144, 961, 975
HpySE526I ACGT 3 cut(s) 93, 675, 1406
Hsp92II CATG 4 cut(s) 44, 54, 468, 884
HspAI GCGC 1 cut(s) 254
Ksp22I TGATCA 2 cut(s) 198, 1108
Kzo9I GATC 6 cut(s) 192, 198, 702, 765, 1108, 1279
LmnI GCTCC 1 cut(s) 1402
Lsp1109I GCAGC 3 cut(s) 93, 422, 1406
LweI GCATC 3 cut(s) 925, 1376, 1421
MaeI CTAG 1 cut(s) 1439
MaeII ACGT 3 cut(s) 93, 675, 1406
MaeIII GTNAC 5 cut(s) 54, 470, 586, 692, 815
MalI GATC 6 cut(s) 194, 200, 704, 767, 1110, 1281
MbiI CCGCTC 1 cut(s) 1459
MboI GATC 6 cut(s) 192, 198, 702, 765, 1108, 1279
MboII GAAGA 6 cut(s) 168, 519, 807, 977, 1145, 1163
MluCI AATT 9 cut(s) 44, 217, 243, 378, 434, 625, 1283, 1351, 1452
MmeI TCCRAC 1 cut(s) 286
Mph1103I ATGCAT 3 cut(s) 343, 1207, 1414
MseI TTAA 5 cut(s) 237, 350, 420, 678, 1200
MslI CAYNNNNRTG 2 cut(s) 885, 1267
MspCI CTTAAG 1 cut(s) 349
MspI CCGG 3 cut(s) 531, 670, 1193
MspR9I CCNGG 2 cut(s) 453, 1194
Mva1269I GAATGC 1 cut(s) 341
MvaI CCWGG 1 cut(s) 453
MwoI GCNNNNNNNGC 3 cut(s) 105, 145, 713
NciI CCSGG 1 cut(s) 1194
NcoI CCATGG 1 cut(s) 50
NdeII GATC 6 cut(s) 192, 198, 702, 765, 1108, 1279
NlaIII CATG 4 cut(s) 44, 54, 468, 884
NlaIV GGNNCC 3 cut(s) 334, 668, 1309
NmuCI GTSAC 3 cut(s) 470, 692, 815
NsiI ATGCAT 3 cut(s) 343, 1207, 1414
PagI TCATGA 2 cut(s) 40, 880
PctI GAATGC 1 cut(s) 341
PfeI GAWTC 5 cut(s) 389, 581, 740, 1114, 1323
PflMI CCANNNNNTGG 1 cut(s) 775
PkrI GCNGC 4 cut(s) 83, 412, 842, 1396
Ppu21I YACGTR 1 cut(s) 94
Psp1406I AACGTT 1 cut(s) 675
Psp6I CCWGG 1 cut(s) 451
PspGI CCWGG 1 cut(s) 451
PspN4I GGNNCC 3 cut(s) 334, 668, 1309
PspPI GGNCC 1 cut(s) 1461
RsaI GTAC 3 cut(s) 92, 403, 1382
RsaNI GTAC 3 cut(s) 91, 402, 1381
RseI CAYNNNNRTG 2 cut(s) 885, 1267
SaqAI TTAA 5 cut(s) 237, 350, 420, 678, 1200
SatI GCNGC 4 cut(s) 82, 411, 841, 1395
Sau3AI GATC 6 cut(s) 192, 198, 702, 765, 1108, 1279
Sau96I GGNCC 1 cut(s) 1461
ScrFI CCNGG 2 cut(s) 453, 1194
SfaNI GCATC 3 cut(s) 925, 1376, 1421
SinI GGWCC 1 cut(s) 1461
SmiMI CAYNNNNRTG 2 cut(s) 885, 1267
SmlI CTYRAG 3 cut(s) 274, 349, 902
SmoI CTYRAG 3 cut(s) 274, 349, 902
SnaBI TACGTA 1 cut(s) 94
Sse9I AATT 9 cut(s) 44, 217, 243, 378, 434, 625, 1283, 1351, 1452
SsiI CCGC 4 cut(s) 28, 840, 938, 1459
SspMI CTAG 1 cut(s) 1439
StyD4I CCNGG 2 cut(s) 451, 1192
StyI CCWWGG 1 cut(s) 50
TaaI ACNGT 2 cut(s) 406, 1491
TaiI ACGT 3 cut(s) 96, 678, 1409
TaqI TCGA 2 cut(s) 345, 431
TasI AATT 9 cut(s) 44, 217, 243, 378, 434, 625, 1283, 1351, 1452
TauI GCSGC 1 cut(s) 843
TfiI GAWTC 5 cut(s) 389, 581, 740, 1114, 1323
Tru1I TTAA 5 cut(s) 237, 350, 420, 678, 1200
Tru9I TTAA 5 cut(s) 237, 350, 420, 678, 1200
TscAI CASTG 1 cut(s) 37
TseFI GTSAC 3 cut(s) 470, 692, 815
TseI GCWGC 3 cut(s) 81, 410, 1394
Tsp45I GTSAC 3 cut(s) 470, 692, 815
TspDTI ATGAA 8 cut(s) 57, 650, 696, 768, 866, 1023, 1197, 1349
TspGWI ACGGA 1 cut(s) 909
TspRI CASTG 1 cut(s) 37
Van91I CCANNNNNTGG 1 cut(s) 775
Vha464I CTTAAG 1 cut(s) 349
VpaK11BI GGWCC 1 cut(s) 1461
XagI CCTNNNNNAGG 1 cut(s) 200
XapI RAATTY 3 cut(s) 44, 217, 625
XmiI GTMKAC 4 cut(s) 232, 645, 918, 1233
XspI CTAG 1 cut(s) 1439
Zsp2I ATGCAT 3 cut(s) 343, 1207, 1414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.