RchiOBHm_Chr4g0393471

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000144
Physical Location & Seq
Forward (+)
9002121 .. 9003809
1689 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36606

Sequence Viewer

Length: 1689 bp
ATGTTTTCTTTATTTTCCTCATTGATTGGTCACTTTAGCGAGATGAAGGTTATTACTGAGACTCTAGTCGTTTGTGGTTGCTTAGTGTTTGGTGGTGTGGTGATTAAAACACAACTACGCCGCAAACCCTGGGAGAAACCACCTGACAATATCGTGGAGATGAGTCTGATGAATGATCCCTGGGAGATATTATCTGACGATATCATGGAGATGGTTGTGCCGCACCTGAGTGTACGTGATCGTATACGATTAAGCAGTGTTTGCAAGTCTTGGAACACCGTTCCTATGCGCAGAGATATCCCTAGTGCTCCACATCAACTCCCCTGGTTAATACTTCCTCAATGTTGCCATAAGAGCTTGAGCTTTTACGACCTCTATGACGGCAAAGTTGGCAAGTTGGACCTGCCTGAACCAGTTCAAGGAGGGTGGTTTCAAGGATCTTCTAAAGGTTGGATGATCATGGTCATGGAAAAAGATCTAGATTCTACAATGTTTCTAGTAAATCCCATTTCAGGTGCCCAACACCAACTTCCATCTTTGATCACGGTTCCATCTTTCCAAAATTTTGTAGAAACGACCAGATGGAAACGCTATGGTGCCTCCCTTTTCAGCTATTGCCTTGTGCTGTCCACCTCGGATATCACTTCAGAGCAATGTATGATAGCAGCTTTCTTTGGAGACGCTGAAACATTGTGTTTGTGCAGACCTGGAGACACGAGTTGGAGTATTTGCGAGGTACTAGATGCTAATGAGGTCATTATGGATTTATTGTTTTCTTCTGGCAAGCTATATGCCTTGGTTCTTAGTCATGATAAGGAAGGCTTTATGTCAGCTCCTCGTACTTTAAGTTGTGGAGGTCATGCCGTGGAATTATATCTGGTCTATGATATAATGCCAAGATTCAGTGACCAGAATGAAGTATATGGGGACTATATAGTCCAATTAAAAGCGTCACTAGACTCACATTTGATAGAGTCAGCAACCAATGGTGAAATATATTTGATCCATCAAATGCAAGATAAATTTATGAAATTGTATGATGACGAGAACCCCGAGGATGGTGGCGGTGGAGGTCAAGGTGAAGGCGGAGGAAATGAGGAGGATGATTATGTTGAAGGCGGGGATGATGACAATGACTCTGACAATGAGGAACATGACAACTTGGAAGATAATGAGGATGGAGGAGATGATATCCATGACATGGATGACGACAATGAGGAACATGATCACAACTTGGAAGATAATGAGGATGGAGGAGATGGTATCCATGACACGGATGACGACAATGAGGAACATGACAACTTGGAAGATAATGAGGATAGAGGAGATGGTATCACTAGAGTTGAGGAAGAAGATCGTGACCTTAATGTATATTTGAGGACAAGTGCTTTTTATGTTTACAAGCTTCACCCAAAGAAGAAGAAGATTGTTAGTGCACGGTGCCTGGAGGATCAAGTATTGTTTTTGTCGGGCGCGGGTCAATTGTCCCTTCCTGCAAGAGAGATCAACAAGTTGGAAGGAAATTGTATTTATTTTGCAACAAATAATCACTCGACTTTACATCAACGAGAATATATAAATCGAGAGCTTGGCATATTCAACTTGGATGATAGAAGAGTTAAGCGATCTTTCCCAAGCGTTAGGGTGTCAGTACGCTCTCGACTTAGTTGGTTTACTCCGATTTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

562

Amino Acids

63.67

Weight (kDa)

4.51

Isoelectric Point (pI)

44.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 122 - 340 9.7e-23 KIB1-4 beta-propeller
Beta-prop_KIB1-4 PF03478 457 - 534 6.4e-10 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 935
Acc16I TGCGCA 1 cut(s) 290
Acc36I ACCTGC 1 cut(s) 411
AccB1I GGYRCC 3 cut(s) 515, 596, 1440
AccB7I CCANNNNNTGG 1 cut(s) 1201
AccI GTMKAC 1 cut(s) 244
AccII CGCG 1 cut(s) 1475
AciI CCGC 6 cut(s) 121, 221, 1065, 1086, 1119, 1475
AclWI GGATC 4 cut(s) 170, 445, 997, 1458
AcsI RAATTY 2 cut(s) 562, 1022
AcuI CTGAAG 1 cut(s) 630
AfaI GTAC 4 cut(s) 234, 738, 841, 1653
AfiI CCNNNNNNNGG 5 cut(s) 419, 512, 1058, 1201, 1273
AgsI TTSAA 4 cut(s) 419, 434, 1115, 1600
AjnI CCWGG 5 cut(s) 128, 179, 323, 706, 1443
AjuI GAANNNNNNNTTGG 2 cut(s) 513, 545
AleI CACNNNNGTG 1 cut(s) 228
AluBI AGCT 8 cut(s) 357, 363, 612, 668, 787, 833, 1405, 1588
AluI AGCT 8 cut(s) 357, 363, 612, 668, 787, 833, 1405, 1588
Alw21I GWGCWC 2 cut(s) 310, 1438
Alw26I GTCTC 3 cut(s) 53, 672, 705
Alw44I GTGCAC 1 cut(s) 1434
AlwI GGATC 4 cut(s) 170, 445, 997, 1458
Ama87I CYCGRG 1 cut(s) 1052
ApaLI GTGCAC 1 cut(s) 1434
ApeKI GCWGC 1 cut(s) 665
ApoI RAATTY 2 cut(s) 562, 1022
Asp700I GAANNNNTTC 1 cut(s) 414
AspLEI GCGC 2 cut(s) 291, 1475
AspS9I GGNCC 1 cut(s) 400
AsuHPI GGTGA 4 cut(s) 112, 1001, 1091, 1400
AvaI CYCGRG 1 cut(s) 1052
AvaII GGWCC 1 cut(s) 400
BaeGI GKGCMC 2 cut(s) 520, 1438
BanI GGYRCC 3 cut(s) 515, 596, 1440
BauI CACGAG 1 cut(s) 715
Bbv12I GWGCWC 2 cut(s) 310, 1438
BbvI GCAGC 1 cut(s) 677
BceAI ACGGC 2 cut(s) 397, 848
BciT130I CCWGG 5 cut(s) 130, 181, 325, 708, 1445
BciVI GTATCC 1 cut(s) 1274
BclI TGATCA 3 cut(s) 456, 540, 1225
BcoDI GTCTC 3 cut(s) 53, 672, 705
BfaI CTAG 7 cut(s) 65, 303, 479, 497, 740, 956, 1338
BfuAI ACCTGC 1 cut(s) 411
BfuI GTATCC 1 cut(s) 1274
BglII AGATCT 1 cut(s) 475
BisI GCNGC 3 cut(s) 121, 221, 666
BlsI GCNGC 3 cut(s) 122, 222, 667
Bme1390I CCNGG 5 cut(s) 130, 181, 325, 708, 1445
Bme18I GGWCC 1 cut(s) 400
BmeT110I CYCGRG 1 cut(s) 1052
BmgT120I GGNCC 1 cut(s) 400
BmiI GGNNCC 4 cut(s) 517, 549, 598, 1442
BmrFI CCNGG 5 cut(s) 130, 181, 325, 708, 1445
BmsI GCATC 1 cut(s) 733
BoxI GACNNNNGTC 1 cut(s) 65
BpmI CTGGAG 2 cut(s) 729, 1466
BpuEI CTTGAG 1 cut(s) 379
BsaAI YACGTR 1 cut(s) 236
BsaJI CCNNGG 9 cut(s) 128, 129, 179, 180, 323, 633, 795, 864, 1053
BsaXI ACNNNNNCTCC 2 cut(s) 303, 333
Bsc4I CCNNNNNNNGG 5 cut(s) 419, 512, 1058, 1201, 1273
Bse1I ACTGG 1 cut(s) 413
Bse3DI GCAATG 1 cut(s) 659
BseBI CCWGG 5 cut(s) 130, 181, 325, 708, 1445
BseDI CCNNGG 9 cut(s) 128, 129, 179, 180, 323, 633, 795, 864, 1053
BseGI GGATG 9 cut(s) 459, 1063, 1108, 1129, 1183, 1210, 1255, 1282, 1612
BseLI CCNNNNNNNGG 5 cut(s) 419, 512, 1058, 1201, 1273
BseMI GCAATG 1 cut(s) 659
BseMII CTCAG 2 cut(s) 48, 218
BseNI ACTGG 1 cut(s) 413
BseRI GAGGAG 5 cut(s) 825, 1112, 1197, 1269, 1338
BseSI GKGCMC 2 cut(s) 520, 1438
BseXI GCAGC 1 cut(s) 677
BsgI GTGCAG 1 cut(s) 721
Bsh1236I CGCG 1 cut(s) 1475
BshNI GGYRCC 3 cut(s) 515, 596, 1440
BsiHKAI GWGCWC 2 cut(s) 310, 1438
BsiHKCI CYCGRG 1 cut(s) 1052
BslFI GGGAC 2 cut(s) 941, 1471
BslI CCNNNNNNNGG 5 cut(s) 419, 512, 1058, 1201, 1273
BsmAI GTCTC 3 cut(s) 53, 672, 705
BsmBI CGTCTC 1 cut(s) 672
BsmFI GGGAC 2 cut(s) 941, 1471
BsoBI CYCGRG 1 cut(s) 1052
Bsp1286I GDGCHC 3 cut(s) 310, 520, 1438
BspACI CCGC 6 cut(s) 121, 221, 1065, 1086, 1119, 1475
BspCNI CTCAG 2 cut(s) 49, 219
BspFNI CGCG 1 cut(s) 1475
BspHI TCATGA 1 cut(s) 808
BspLI GGNNCC 4 cut(s) 517, 549, 598, 1442
BspMI ACCTGC 1 cut(s) 411
BspPI GGATC 4 cut(s) 170, 445, 997, 1458
BspT107I GGYRCC 3 cut(s) 515, 596, 1440
BsrDI GCAATG 1 cut(s) 659
BsrI ACTGG 1 cut(s) 413
BssECI CCNNGG 9 cut(s) 128, 129, 179, 180, 323, 633, 795, 864, 1053
BssNAI GTATAC 1 cut(s) 245
BssSI CACGAG 1 cut(s) 715
BssT1I CCWWGG 1 cut(s) 795
Bst1107I GTATAC 1 cut(s) 245
Bst2BI CACGAG 1 cut(s) 715
Bst2UI CCWGG 5 cut(s) 130, 181, 325, 708, 1445
Bst4CI ACNGT 3 cut(s) 280, 547, 1440
Bst6I CTCTTC 1 cut(s) 1609
BstAPI GCANNNNNTGC 1 cut(s) 261
BstBAI YACGTR 1 cut(s) 236
BstC8I GCNNGC 1 cut(s) 785
BstDEI CTNAG 5 cut(s) 57, 82, 227, 803, 1664
BstDSI CCRYGG 1 cut(s) 864
BstF5I GGATG 9 cut(s) 459, 1063, 1108, 1129, 1183, 1210, 1255, 1282, 1612
BstFNI CGCG 1 cut(s) 1475
BstHHI GCGC 2 cut(s) 291, 1475
BstMAI GTCTC 3 cut(s) 53, 672, 705
BstMWI GCNNNNNNNGC 3 cut(s) 261, 354, 390
BstNI CCWGG 5 cut(s) 130, 181, 325, 708, 1445
BstPAI GACNNNNGTC 1 cut(s) 65
BstSCI CCNGG 5 cut(s) 128, 179, 323, 706, 1443
BstSLI GKGCMC 2 cut(s) 520, 1438
BstUI CGCG 1 cut(s) 1475
BstV1I GCAGC 1 cut(s) 677
BstX2I RGATCY 2 cut(s) 437, 475
BstYI RGATCY 2 cut(s) 437, 475
BstZ17I GTATAC 1 cut(s) 245
BsuI GTATCC 1 cut(s) 1274
BtgI CCRYGG 1 cut(s) 864
BtsCI GGATG 9 cut(s) 459, 1063, 1108, 1129, 1183, 1210, 1255, 1282, 1612
BtsI GCAGTG 1 cut(s) 262
BtsIMutI CAGTG 2 cut(s) 262, 910
BveI ACCTGC 1 cut(s) 411
Cac8I GCNNGC 1 cut(s) 785
CciI TCATGA 1 cut(s) 808
CfoI GCGC 2 cut(s) 291, 1475
Cfr13I GGNCC 1 cut(s) 400
CseI GACGC 2 cut(s) 689, 939
Csp6I GTAC 4 cut(s) 233, 737, 840, 1652
CspCI CAANNNNNGTGG 2 cut(s) 407, 442
CviJI RGCY 9 cut(s) 357, 363, 612, 668, 787, 822, 833, 1405, 1588
CviKI_1 RGCY 9 cut(s) 357, 363, 612, 668, 787, 822, 833, 1405, 1588
CviQI GTAC 4 cut(s) 233, 737, 840, 1652
DdeI CTNAG 5 cut(s) 57, 82, 227, 803, 1664
DrdI GACNNNNNNGTC 1 cut(s) 935
DseDI GACNNNNNNGTC 1 cut(s) 935
Eam1104I CTCTTC 1 cut(s) 1609
EarI CTCTTC 1 cut(s) 1609
EciI GGCGGA 1 cut(s) 1101
Eco130I CCWWGG 1 cut(s) 795
Eco32I GATATC 4 cut(s) 202, 298, 640, 1192
Eco47I GGWCC 1 cut(s) 400
Eco57I CTGAAG 1 cut(s) 630
Eco88I CYCGRG 1 cut(s) 1052
EcoRII CCWGG 5 cut(s) 128, 179, 323, 706, 1443
EcoRV GATATC 4 cut(s) 202, 298, 640, 1192
EcoT14I CCWWGG 1 cut(s) 795
ErhI CCWWGG 1 cut(s) 795
Esp3I CGTCTC 1 cut(s) 672
FalI AAGNNNNNCTT 2 cut(s) 806, 838
FaqI GGGAC 2 cut(s) 941, 1471
FauI CCCGC 2 cut(s) 1112, 1468
FbaI TGATCA 3 cut(s) 456, 540, 1225
FblI GTMKAC 1 cut(s) 244
Fnu4HI GCNGC 3 cut(s) 121, 221, 666
FokI GGATG 9 cut(s) 466, 1070, 1115, 1136, 1190, 1217, 1262, 1289, 1619
Fsp4HI GCNGC 3 cut(s) 121, 221, 666
FspBI CTAG 7 cut(s) 65, 303, 479, 497, 740, 956, 1338
FspI TGCGCA 1 cut(s) 290
GlaI GCGC 2 cut(s) 290, 1474
GluI GCNGC 3 cut(s) 121, 221, 666
GsuI CTGGAG 2 cut(s) 729, 1466
HgaI GACGC 2 cut(s) 689, 939
HhaI GCGC 2 cut(s) 291, 1475
Hin6I GCGC 2 cut(s) 289, 1473
HinP1I GCGC 2 cut(s) 289, 1473
HindIII AAGCTT 1 cut(s) 1403
HinfI GANTC 7 cut(s) 61, 163, 482, 900, 959, 974, 1136
HphI GGTGA 4 cut(s) 112, 1001, 1091, 1400
Hpy166II GTNNAC 6 cut(s) 233, 245, 630, 1399, 1436, 1674
Hpy188I TCNGA 6 cut(s) 168, 196, 637, 649, 1141, 1680
Hpy188III TCNNGA 5 cut(s) 479, 809, 1358, 1583, 1659
Hpy8I GTNNAC 6 cut(s) 233, 245, 630, 1399, 1436, 1674
HpyAV CCTTC 6 cut(s) 40, 812, 1076, 1109, 1499, 1511
HpyCH4III ACNGT 3 cut(s) 280, 547, 1440
HpyCH4IV ACGT 1 cut(s) 235
HpyCH4V TGCA 6 cut(s) 264, 702, 1015, 1436, 1496, 1538
HpyF10VI GCNNNNNNNGC 3 cut(s) 261, 354, 390
HpyF3I CTNAG 5 cut(s) 57, 82, 227, 803, 1664
HpySE526I ACGT 1 cut(s) 235
HspAI GCGC 2 cut(s) 289, 1473
Ksp22I TGATCA 3 cut(s) 456, 540, 1225
LmnI GCTCC 2 cut(s) 313, 838
Lsp1109I GCAGC 1 cut(s) 677
LweI GCATC 1 cut(s) 733
MaeI CTAG 7 cut(s) 65, 303, 479, 497, 740, 956, 1338
MaeII ACGT 1 cut(s) 235
MaeIII GTNAC 4 cut(s) 29, 905, 951, 1358
MfeI CAATTG 1 cut(s) 1481
MflI RGATCY 2 cut(s) 437, 475
MhlI GDGCHC 3 cut(s) 310, 520, 1438
MluCI AATT 7 cut(s) 562, 869, 941, 1022, 1031, 1481, 1522
MlyI GAGTC 5 cut(s) 55, 172, 953, 983, 1130
MmeI TCCRAC 4 cut(s) 378, 431, 701, 1494
MroXI GAANNNNTTC 1 cut(s) 414
MseI TTAA 7 cut(s) 105, 251, 329, 845, 944, 1365, 1620
MslI CAYNNNNRTG 3 cut(s) 209, 228, 464
MspR9I CCNGG 5 cut(s) 130, 181, 325, 708, 1445
MunI CAATTG 1 cut(s) 1481
MvaI CCWGG 5 cut(s) 130, 181, 325, 708, 1445
MvnI CGCG 1 cut(s) 1475
MwoI GCNNNNNNNGC 3 cut(s) 261, 354, 390
NlaIV GGNNCC 4 cut(s) 517, 549, 598, 1442
NmuCI GTSAC 4 cut(s) 29, 905, 951, 1358
NsbI TGCGCA 1 cut(s) 290
OliI CACNNNNGTG 1 cut(s) 228
PagI TCATGA 1 cut(s) 808
PasI CCCWGGG 2 cut(s) 129, 180
PcsI WCGNNNNNNNCGW 1 cut(s) 1050
PdmI GAANNNNTTC 1 cut(s) 414
PfeI GAWTC 2 cut(s) 482, 900
PflMI CCANNNNNTGG 1 cut(s) 1201
PkrI GCNGC 3 cut(s) 122, 222, 667
PleI GAGTC 5 cut(s) 55, 171, 953, 982, 1130
PpsI GAGTC 5 cut(s) 55, 171, 953, 982, 1130
Ppu21I YACGTR 1 cut(s) 236
PshAI GACNNNNGTC 1 cut(s) 65
Psp6I CCWGG 5 cut(s) 128, 179, 323, 706, 1443
PspGI CCWGG 5 cut(s) 128, 179, 323, 706, 1443
PspN4I GGNNCC 4 cut(s) 517, 549, 598, 1442
PspPI GGNCC 1 cut(s) 400
PsuI RGATCY 2 cut(s) 437, 475
RsaI GTAC 4 cut(s) 234, 738, 841, 1653
RsaNI GTAC 4 cut(s) 233, 737, 840, 1652
RseI CAYNNNNRTG 3 cut(s) 209, 228, 464
SaqAI TTAA 7 cut(s) 105, 251, 329, 845, 944, 1365, 1620
SatI GCNGC 3 cut(s) 121, 221, 666
Sau96I GGNCC 1 cut(s) 400
SchI GAGTC 5 cut(s) 55, 172, 953, 983, 1130
ScrFI CCNGG 5 cut(s) 130, 181, 325, 708, 1445
SduI GDGCHC 3 cut(s) 310, 520, 1438
SfaNI GCATC 1 cut(s) 733
SinI GGWCC 1 cut(s) 400
SmiMI CAYNNNNRTG 3 cut(s) 209, 228, 464
SmlI CTYRAG 1 cut(s) 358
SmoI CTYRAG 1 cut(s) 358
Sse9I AATT 7 cut(s) 562, 869, 941, 1022, 1031, 1481, 1522
SsiI CCGC 6 cut(s) 121, 221, 1065, 1086, 1119, 1475
SspMI CTAG 7 cut(s) 65, 303, 479, 497, 740, 956, 1338
StyD4I CCNGG 5 cut(s) 128, 179, 323, 706, 1443
StyI CCWWGG 1 cut(s) 795
TaaI ACNGT 3 cut(s) 280, 547, 1440
TaiI ACGT 1 cut(s) 238
TaqI TCGA 3 cut(s) 1553, 1582, 1660
TasI AATT 7 cut(s) 562, 869, 941, 1022, 1031, 1481, 1522
TauI GCSGC 2 cut(s) 123, 223
TfiI GAWTC 2 cut(s) 482, 900
Tru1I TTAA 7 cut(s) 105, 251, 329, 845, 944, 1365, 1620
Tru9I TTAA 7 cut(s) 105, 251, 329, 845, 944, 1365, 1620
TscAI CASTG 2 cut(s) 262, 910
TseFI GTSAC 4 cut(s) 29, 905, 951, 1358
TseI GCWGC 1 cut(s) 665
Tsp45I GTSAC 4 cut(s) 29, 905, 951, 1358
TspDTI ATGAA 4 cut(s) 59, 185, 930, 1043
TspGWI ACGGA 1 cut(s) 1289
TspRI CASTG 2 cut(s) 262, 910
Van91I CCANNNNNTGG 1 cut(s) 1201
VneI GTGCAC 1 cut(s) 1434
VpaK11BI GGWCC 1 cut(s) 400
XapI RAATTY 2 cut(s) 562, 1022
XbaI TCTAGA 1 cut(s) 478
XmiI GTMKAC 1 cut(s) 244
XmnI GAANNNNTTC 1 cut(s) 414
XspI CTAG 7 cut(s) 65, 303, 479, 497, 740, 956, 1338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.