Rorug05G0546900

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000144
Physical Location & Seq
Reverse (-)
73579539 .. 73580741
1203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0546900.1

Sequence Viewer

Length: 1203 bp
ATGTCGTCGTCTTCTTCTATCTCATCCTCGTTTCGATTATTCACAACCAAACTCCCCAACTCTTCTTTCAACCCCAAAACCCTGTCCGCCTTCCCAAAACACCCAAACTTCTCTTCCTTCCGTCGACCCATCTCTTTCGAAAGAATCCCCACCATATCCTCATCCCGATCCCCATCTGCCTTAGCACCATCAGCTTCAATGCCCCTGCAACCCATCGAAGAACTCCCCCCGAAGCTTCGAGAAATTGTCAAGCTCTTCCAGTCCGTACCGGTTCCAAAAGCCAAGTACGAGGAGCTCCTGTACTACGGCAAGAAGCTCAAACCCCTCGAAGATAAGTACAAGACAAAAGAGAACAAGGTCGAAGGTTGTGTGTCGCAGGTTTGGGTCCGAGCCTACCTCGATTCCGACAAGAACGTGTTCTTTGAGGCCGCTTCCGACGCGCTTATCTCGAAAGGTCTCGCTGCTCTGCTCGTTAAAGGGCTCTCGGGTGAACCCGTGGAGGAAATTTTGAGGGTCCGACCCGATTTCGCGCTCCATCTTGGGCTTCAGCAGAGCTTATCCCCTGGTAGGAATAATGGGTTTTTGAATATGTTGAAGTTGATGCAGAAAAAGGCTAAGGATTTGGTTAGTGGGTCGGATTCTGTGGATTTGGGATTGAATTCTCAAGTGGGTGGTGAAAAGATTTCGACTTCGGGTTCGGAAATCGATGGTGGCATTGAGGGTTCTAGTGTTGGATTGAGCTCTAATGAAAATGCTGAGCAATTGAGTGGTACTAGTGGAAAGAATTCGACTTTGGGTTTGAAAATCAATGGTGGCATTGAGAGTGTGAATGTTGAATCGAGGTCAGAAGGAAATGTGAAGGAATTGGAGGTGGTAGGGAGTGTTTCGAATGAAGAGGAGTCGAATTCGGGTGATTTGGGGGGTCGAGGGAAGAGAATTAGGGAAGCATTGGCGAGAGAGCTTAGTCCTGTGGAATTGGAAGTAGAGGATATCTCTTACCAACACGCCGGGCATGCCGGAGTTAGAGGAAGTGGTGATGGGGAGACGCATTTCAATGTGAGAGTTGTGACTAAGGAGTTTGAAGGGAAGAGTATGATCAAGAGGCATAGGCTCATCTACGGCTTGTTGCAAGAGGAGTTGCAGAGTGGACTACATGCATTGTCTATCGAGGCGAAGACGCCAGCTGAAGTGAGTACAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

400

Amino Acids

43.27

Weight (kDa)

7.09

Isoelectric Point (pI)

52.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SufE PF02657 84 - 203 1.6e-38 Fe-S metabolism associated domain
BolA PF01722 317 - 396 2.3e-29 BolA-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 367
AccI GTMKAC 1 cut(s) 124
AccII CGCG 2 cut(s) 440, 530
AciI CCGC 2 cut(s) 87, 429
AclWI GGATC 1 cut(s) 162
AcsI RAATTY 4 cut(s) 504, 658, 784, 904
AcuI CTGAAG 1 cut(s) 530
AcyI GRCGYC 1 cut(s) 1178
AfaI GTAC 6 cut(s) 267, 287, 302, 338, 772, 1195
AfiI CCNNNNNNNGG 1 cut(s) 567
AflIII ACRYGT 1 cut(s) 414
AgeI ACCGGT 1 cut(s) 268
AgsI TTSAA 9 cut(s) 70, 198, 586, 595, 658, 802, 836, 1054, 1082
AhlI ACTAGT 1 cut(s) 773
AjnI CCWGG 1 cut(s) 562
AjuI GAANNNNNNNTTGG 6 cut(s) 50, 82, 97, 129, 776, 808
AluBI AGCT 9 cut(s) 194, 235, 253, 295, 316, 555, 741, 961, 1184
AluI AGCT 9 cut(s) 194, 235, 253, 295, 316, 555, 741, 961, 1184
Alw21I GWGCWC 2 cut(s) 297, 743
Alw26I GTCTC 2 cut(s) 461, 1037
AlwI GGATC 1 cut(s) 162
Ama87I CYCGRG 1 cut(s) 484
AoxI GGCC 1 cut(s) 426
ApeKI GCWGC 1 cut(s) 461
ApoI RAATTY 4 cut(s) 504, 658, 784, 904
ArsI GACNNNNNNTTYG 4 cut(s) 679, 711, 781, 813
AsiGI ACCGGT 1 cut(s) 268
Asp700I GAANNNNTTC 2 cut(s) 416, 784
AspLEI GCGC 2 cut(s) 442, 532
AspS9I GGNCC 2 cut(s) 385, 514
AsuC2I CCSGG 1 cut(s) 1009
AsuHPI GGTGA 4 cut(s) 500, 686, 923, 1046
AsuII TTCGAA 2 cut(s) 138, 887
AvaI CYCGRG 1 cut(s) 484
AvaII GGWCC 2 cut(s) 385, 514
BanII GRGCYC 3 cut(s) 297, 483, 743
BbsI GAAGAC 2 cut(s) 3, 1181
Bbv12I GWGCWC 2 cut(s) 297, 743
BbvI GCAGC 1 cut(s) 448
BccI CCATC 7 cut(s) 137, 181, 196, 221, 543, 701, 1031
BceAI ACGGC 2 cut(s) 322, 1135
BciT130I CCWGG 1 cut(s) 564
BclI TGATCA 1 cut(s) 1095
BcnI CCSGG 1 cut(s) 1009
BcoDI GTCTC 2 cut(s) 461, 1037
BcuI ACTAGT 1 cut(s) 773
BfaI CTAG 2 cut(s) 726, 774
BfuAI ACCTGC 1 cut(s) 367
BisI GCNGC 2 cut(s) 429, 462
BlpI GCTNAGC 1 cut(s) 756
BlsI GCNGC 2 cut(s) 430, 463
Bme1390I CCNGG 2 cut(s) 564, 1009
Bme18I GGWCC 2 cut(s) 385, 514
BmeT110I CYCGRG 1 cut(s) 484
BmgT120I GGNCC 2 cut(s) 385, 514
BmiI GGNNCC 3 cut(s) 273, 386, 515
BmrFI CCNGG 2 cut(s) 564, 1009
BmsI GCATC 1 cut(s) 591
BpiI GAAGAC 2 cut(s) 3, 1181
BplI GAGNNNNNCTC 4 cut(s) 381, 413, 977, 1009
Bpu10I CCTNAGC 2 cut(s) 181, 615
Bpu1102I GCTNAGC 1 cut(s) 756
Bpu14I TTCGAA 2 cut(s) 138, 887
BpuEI CTTGAG 1 cut(s) 648
BpuMI CCSGG 1 cut(s) 1009
Bsa29I ATCGAT 1 cut(s) 705
BsaBI GATNNNNATC 1 cut(s) 172
BsaHI GRCGYC 1 cut(s) 1178
BsaI GGTCTC 1 cut(s) 461
BsaJI CCNNGG 2 cut(s) 495, 562
BsaWI WCCGGW 1 cut(s) 268
BsaXI ACNNNNNCTCC 2 cut(s) 284, 314
Bsc4I CCNNNNNNNGG 1 cut(s) 567
Bse118I RCCGGY 1 cut(s) 268
Bse1I ACTGG 1 cut(s) 259
Bse8I GATNNNNATC 1 cut(s) 172
BseBI CCWGG 1 cut(s) 564
BseCI ATCGAT 1 cut(s) 705
BseDI CCNNGG 2 cut(s) 495, 562
BseGI GGATG 2 cut(s) 23, 161
BseJI GATNNNNATC 1 cut(s) 172
BseLI CCNNNNNNNGG 1 cut(s) 567
BseMII CTCAG 1 cut(s) 747
BseNI ACTGG 1 cut(s) 259
BseRI GAGGAG 3 cut(s) 305, 911, 1148
BseXI GCAGC 1 cut(s) 448
Bsh1236I CGCG 2 cut(s) 440, 530
BshFI GGCC 1 cut(s) 428
BshTI ACCGGT 1 cut(s) 268
BshVI ATCGAT 1 cut(s) 705
BsiHKAI GWGCWC 2 cut(s) 297, 743
BsiHKCI CYCGRG 1 cut(s) 484
BsiSI CCGG 3 cut(s) 269, 1008, 1017
BslI CCNNNNNNNGG 1 cut(s) 567
BsmAI GTCTC 2 cut(s) 461, 1037
BsmBI CGTCTC 1 cut(s) 1037
BsnI GGCC 1 cut(s) 428
Bso31I GGTCTC 1 cut(s) 461
BsoBI CYCGRG 1 cut(s) 484
Bsp119I TTCGAA 2 cut(s) 138, 887
Bsp1286I GDGCHC 3 cut(s) 297, 483, 743
Bsp143I GATC 2 cut(s) 167, 1095
Bsp1720I GCTNAGC 1 cut(s) 756
BspACI CCGC 2 cut(s) 87, 429
BspANI GGCC 1 cut(s) 428
BspCNI CTCAG 1 cut(s) 748
BspDI ATCGAT 1 cut(s) 705
BspFNI CGCG 2 cut(s) 440, 530
BspLI GGNNCC 3 cut(s) 273, 386, 515
BspMI ACCTGC 1 cut(s) 367
BspPI GGATC 1 cut(s) 162
BspQI GCTCTTC 1 cut(s) 260
BspT104I TTCGAA 2 cut(s) 138, 887
BspTNI GGTCTC 1 cut(s) 461
BsrFI RCCGGY 1 cut(s) 268
BsrI ACTGG 1 cut(s) 259
BssAI RCCGGY 1 cut(s) 268
BssECI CCNNGG 2 cut(s) 495, 562
BssMI GATC 2 cut(s) 167, 1095
BssNI GRCGYC 1 cut(s) 1178
Bst2UI CCWGG 1 cut(s) 564
Bst6I CTCTTC 6 cut(s) 67, 118, 260, 888, 926, 1082
BstACI GRCGYC 1 cut(s) 1178
BstBI TTCGAA 2 cut(s) 138, 887
BstC8I GCNNGC 2 cut(s) 1014, 1182
BstDEI CTNAG 5 cut(s) 181, 615, 756, 962, 1071
BstDSI CCRYGG 1 cut(s) 495
BstF5I GGATG 2 cut(s) 23, 161
BstFNI CGCG 2 cut(s) 440, 530
BstHHI GCGC 2 cut(s) 442, 532
BstKTI GATC 2 cut(s) 170, 1098
BstMAI GTCTC 2 cut(s) 461, 1037
BstMBI GATC 2 cut(s) 167, 1095
BstMWI GCNNNNNNNGC 3 cut(s) 191, 437, 1013
BstNI CCWGG 1 cut(s) 564
BstNSI RCATGY 2 cut(s) 1016, 1157
BstSCI CCNGG 2 cut(s) 562, 1007
BstUI CGCG 2 cut(s) 440, 530
BstV1I GCAGC 1 cut(s) 448
BstV2I GAAGAC 2 cut(s) 3, 1181
Bsu15I ATCGAT 1 cut(s) 705
BsuRI GGCC 1 cut(s) 428
BsuTUI ATCGAT 1 cut(s) 705
BtgI CCRYGG 1 cut(s) 495
BtsCI GGATG 2 cut(s) 23, 161
BveI ACCTGC 1 cut(s) 367
Cac8I GCNNGC 2 cut(s) 1014, 1182
CfoI GCGC 2 cut(s) 442, 532
Cfr10I RCCGGY 1 cut(s) 268
Cfr13I GGNCC 2 cut(s) 385, 514
ClaI ATCGAT 1 cut(s) 705
CseI GACGC 3 cut(s) 446, 1054, 1186
Csp6I GTAC 6 cut(s) 266, 286, 301, 337, 771, 1194
CspAI ACCGGT 1 cut(s) 268
CviAII CATG 2 cut(s) 1013, 1154
CviQI GTAC 6 cut(s) 266, 286, 301, 337, 771, 1194
DdeI CTNAG 5 cut(s) 181, 615, 756, 962, 1071
DpnI GATC 2 cut(s) 169, 1097
DpnII GATC 2 cut(s) 167, 1095
Eam1104I CTCTTC 6 cut(s) 67, 118, 260, 888, 926, 1082
EarI CTCTTC 6 cut(s) 67, 118, 260, 888, 926, 1082
EciI GGCGGA 1 cut(s) 76
Ecl136II GAGCTC 2 cut(s) 295, 741
Eco24I GRGCYC 3 cut(s) 297, 483, 743
Eco31I GGTCTC 1 cut(s) 461
Eco32I GATATC 1 cut(s) 991
Eco47I GGWCC 2 cut(s) 385, 514
Eco53kI GAGCTC 2 cut(s) 295, 741
Eco57I CTGAAG 1 cut(s) 530
Eco88I CYCGRG 1 cut(s) 484
EcoICRI GAGCTC 2 cut(s) 295, 741
EcoRI GAATTC 3 cut(s) 658, 784, 904
EcoRII CCWGG 1 cut(s) 562
EcoRV GATATC 1 cut(s) 991
EcoT22I ATGCAT 1 cut(s) 1159
EcoT38I GRGCYC 3 cut(s) 297, 483, 743
Esp3I CGTCTC 1 cut(s) 1037
FaeI CATG 2 cut(s) 1016, 1157
FaiI YATR 6 cut(s) 155, 590, 1014, 1094, 1107, 1155
FatI CATG 2 cut(s) 1012, 1153
FbaI TGATCA 1 cut(s) 1095
FblI GTMKAC 1 cut(s) 124
Fnu4HI GCNGC 2 cut(s) 429, 462
FokI GGATG 2 cut(s) 10, 148
FriOI GRGCYC 3 cut(s) 297, 483, 743
Fsp4HI GCNGC 2 cut(s) 429, 462
FspBI CTAG 2 cut(s) 726, 774
GlaI GCGC 2 cut(s) 441, 531
GluI GCNGC 2 cut(s) 429, 462
HaeIII GGCC 1 cut(s) 428
HapII CCGG 3 cut(s) 269, 1008, 1017
HgaI GACGC 3 cut(s) 446, 1054, 1186
HhaI GCGC 2 cut(s) 442, 532
Hin1I GRCGYC 1 cut(s) 1178
Hin1II CATG 2 cut(s) 1016, 1157
Hin6I GCGC 2 cut(s) 440, 530
HinP1I GCGC 2 cut(s) 440, 530
HincII GTYRAC 1 cut(s) 125
HindII GTYRAC 1 cut(s) 125
HindIII AAGCTT 1 cut(s) 233
HinfI GANTC 5 cut(s) 144, 401, 638, 836, 899
HpaII CCGG 3 cut(s) 269, 1008, 1017
HphI GGTGA 4 cut(s) 500, 686, 923, 1046
Hpy166II GTNNAC 3 cut(s) 125, 491, 1148
Hpy188I TCNGA 7 cut(s) 389, 406, 436, 518, 637, 700, 847
Hpy188III TCNNGA 4 cut(s) 165, 239, 448, 1099
Hpy8I GTNNAC 3 cut(s) 125, 491, 1148
Hpy99I CGWCG 3 cut(s) 10, 126, 440
HpyAV CCTTC 6 cut(s) 100, 127, 356, 842, 853, 1076
HpyCH4IV ACGT 1 cut(s) 414
HpyCH4V TGCA 5 cut(s) 208, 604, 1129, 1141, 1157
HpyF10VI GCNNNNNNNGC 3 cut(s) 191, 437, 1013
HpyF3I CTNAG 5 cut(s) 181, 615, 756, 962, 1071
HpySE526I ACGT 1 cut(s) 414
Hsp92I GRCGYC 1 cut(s) 1178
Hsp92II CATG 2 cut(s) 1016, 1157
HspAI GCGC 2 cut(s) 440, 530
Ksp22I TGATCA 1 cut(s) 1095
Kzo9I GATC 2 cut(s) 167, 1095
LguI GCTCTTC 1 cut(s) 260
LmnI GCTCC 3 cut(s) 292, 300, 537
Lsp1109I GCAGC 1 cut(s) 448
LweI GCATC 1 cut(s) 591
MaeI CTAG 2 cut(s) 726, 774
MaeII ACGT 1 cut(s) 414
MaeIII GTNAC 1 cut(s) 1066
MalI GATC 2 cut(s) 169, 1097
MboI GATC 2 cut(s) 167, 1095
MfeI CAATTG 1 cut(s) 761
MhlI GDGCHC 3 cut(s) 297, 483, 743
MluCI AATT 9 cut(s) 243, 504, 658, 761, 784, 863, 904, 936, 974
MlyI GAGTC 1 cut(s) 908
MmeI TCCRAC 5 cut(s) 429, 459, 541, 615, 712
Mph1103I ATGCAT 1 cut(s) 1159
MroXI GAANNNNTTC 2 cut(s) 416, 784
MseI TTAA 1 cut(s) 474
MslI CAYNNNNRTG 1 cut(s) 1053
MspA1I CMGCKG 1 cut(s) 1184
MspI CCGG 3 cut(s) 269, 1008, 1017
MspR9I CCNGG 2 cut(s) 564, 1009
MunI CAATTG 1 cut(s) 761
MvaI CCWGG 1 cut(s) 564
MvnI CGCG 2 cut(s) 440, 530
MwoI GCNNNNNNNGC 3 cut(s) 191, 437, 1013
NciI CCSGG 1 cut(s) 1009
NdeII GATC 2 cut(s) 167, 1095
NlaIII CATG 2 cut(s) 1016, 1157
NlaIV GGNNCC 3 cut(s) 273, 386, 515
NmuCI GTSAC 1 cut(s) 1066
NsiI ATGCAT 1 cut(s) 1159
NspI RCATGY 2 cut(s) 1016, 1157
NspV TTCGAA 2 cut(s) 138, 887
PaeI GCATGC 1 cut(s) 1016
PciSI GCTCTTC 1 cut(s) 260
PdmI GAANNNNTTC 2 cut(s) 416, 784
PfeI GAWTC 4 cut(s) 144, 401, 638, 836
PinAI ACCGGT 1 cut(s) 268
PkrI GCNGC 2 cut(s) 430, 463
PleI GAGTC 1 cut(s) 907
PpsI GAGTC 1 cut(s) 907
Psp124BI GAGCTC 2 cut(s) 297, 743
Psp6I CCWGG 1 cut(s) 562
PspGI CCWGG 1 cut(s) 562
PspN4I GGNNCC 3 cut(s) 273, 386, 515
PspPI GGNCC 2 cut(s) 385, 514
PvuII CAGCTG 1 cut(s) 1184
RsaI GTAC 6 cut(s) 267, 287, 302, 338, 772, 1195
RsaNI GTAC 6 cut(s) 266, 286, 301, 337, 771, 1194
RseI CAYNNNNRTG 1 cut(s) 1053
SacI GAGCTC 2 cut(s) 297, 743
SalI GTCGAC 1 cut(s) 123
SapI GCTCTTC 1 cut(s) 260
SaqAI TTAA 1 cut(s) 474
SatI GCNGC 2 cut(s) 429, 462
Sau3AI GATC 2 cut(s) 167, 1095
Sau96I GGNCC 2 cut(s) 385, 514
SchI GAGTC 1 cut(s) 908
ScrFI CCNGG 2 cut(s) 564, 1009
SduI GDGCHC 3 cut(s) 297, 483, 743
SfaNI GCATC 1 cut(s) 591
SfuI TTCGAA 2 cut(s) 138, 887
SinI GGWCC 2 cut(s) 385, 514
SmiMI CAYNNNNRTG 1 cut(s) 1053
SmlI CTYRAG 1 cut(s) 663
SmoI CTYRAG 1 cut(s) 663
SpeI ACTAGT 1 cut(s) 773
SphI GCATGC 1 cut(s) 1016
Sse9I AATT 9 cut(s) 243, 504, 658, 761, 784, 863, 904, 936, 974
SsiI CCGC 2 cut(s) 87, 429
SspMI CTAG 2 cut(s) 726, 774
SstI GAGCTC 2 cut(s) 297, 743
StyD4I CCNGG 2 cut(s) 562, 1007
TaiI ACGT 1 cut(s) 417
TasI AATT 9 cut(s) 243, 504, 658, 761, 784, 863, 904, 936, 974
TatI WGTACW 3 cut(s) 300, 336, 1193
TauI GCSGC 1 cut(s) 431
TfiI GAWTC 4 cut(s) 144, 401, 638, 836
Tru1I TTAA 1 cut(s) 474
Tru9I TTAA 1 cut(s) 474
TseFI GTSAC 1 cut(s) 1066
TseI GCWGC 1 cut(s) 461
Tsp45I GTSAC 1 cut(s) 1066
TspDTI ATGAA 2 cut(s) 762, 906
TspGWI ACGGA 2 cut(s) 110, 253
VpaK11BI GGWCC 2 cut(s) 385, 514
XapI RAATTY 4 cut(s) 504, 658, 784, 904
XceI RCATGY 2 cut(s) 1016, 1157
XmiI GTMKAC 1 cut(s) 124
XmnI GAANNNNTTC 2 cut(s) 416, 784
XspI CTAG 2 cut(s) 726, 774
Zsp2I ATGCAT 1 cut(s) 1159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.