Rw6G021280

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000144
Physical Location & Seq
Forward (+)
42492290 .. 42493543
1254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G021280.1

Sequence Viewer

Length: 1254 bp
ATGATTCTTAAGCACACGAACCTTAGTGGTCGAGTACGATTCAGCAGTTTGTGCAAGTTTTGGAGGTGTGTTTCGATGCGAAGAGACATTCATGCTCCACCACAACTCCCATGGTTAGTTCACCCTCAAGTCCCAGCCTTCCCTAGCTACTTGAGCTTCTCAAGTCTCTCTGAGGGAAAAATTTTCAAGTTTAGGTTCCCTAGGACAAATTACGGTACGTTGTGTTGTGGCTCTTCCAAAGGTTGGCTGTTTATGTCTAAGATGTACGCATGGCTGAGATCTGAACAATTGTTTTTACTGAATCCAATTTCAGGAGCACGGCACCAACTACCCTACTTAGTGCATTGTTCCACTGTTGAGGTACTCGCGTTATCCAGCAATGCTATCTCAGAATGTATAGTGGCAATAGTTCTTAATGATGACAAAGAATTGGGATTGTGTAGACCTGGAGACAAAAGCTGGAGTGTGTTCCAAGTATTAGATGAGACCAACTATGTGGGTGACATAACCAGCTTATTGTTTTCCTCTTCGGGTACGCTATTTGCCTTGGTTGAGTACTGTAGTGGTGCCTATGGTGTTGGTGCAGTTCGGACTTTGAAACTTGGAGGGGACATTGAAGTGAAATTGCAGTTGGTCTATTTCGAACAAAATTGGTGGATCAATAATGGGCTGATCGATGTCTTTCCAGGAGTGGCATACCATGCATATTTGTTAGAATCAACCAACAACGAAGTTCTGTTGATCCTTCATTTTTATGATCGTCTTGATGGAAGAAATGTGAATGAGGATAACATGGAAGGCAACAACAACAACAACCACGAACAAGGAGATGAGGTCCTCATCGAGGAACTAGGTAATGAGGATATGGGAGAAGAAGGCAATAATGAGGAGAATGAGGATCATAATCCAGCTGGCTTTATTTACTTGAGGACAAAATGTTTCGGAATATATAAGATTGATGCTGACAATCGCAACTTTCTAAAGGTACAAACTTTGGGGGACCAAATATTATTTGTTGCAAACTATGGTTCTTCCTTGGCCCTTCCGGCTTCTGATTTCAAAGAGTTGCACGGGAATTGCATATATTTTGCAACAATAGGAGGCTTTAGTCTACATCTAGAATCCTGTATATCACGTGAGATTGGCATCTTCTACCTAGATAGTGGAAGAGTCGAGCGACCCTTTCCAAGTATGATGATACCAACAGACGGCTGTGGACCGAGTTGGTTTACTCCAAGTTTAATGGATAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

417

Amino Acids

47.01

Weight (kDa)

5.19

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 53 - 384 7.6e-34 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 321, 566
AccB7I CCANNNNNTGG 1 cut(s) 243
AccI GTMKAC 2 cut(s) 442, 1111
AccII CGCG 1 cut(s) 368
AclWI GGATC 3 cut(s) 665, 736, 906
AcsI RAATTY 1 cut(s) 180
AcvI CACGTG 1 cut(s) 1136
AfaI GTAC 7 cut(s) 36, 217, 266, 363, 535, 557, 987
AfiI CCNNNNNNNGG 4 cut(s) 243, 311, 844, 1208
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 4 cut(s) 187, 598, 617, 1060
AjnI CCWGG 2 cut(s) 445, 685
AjuI GAANNNNNNNTTGG 2 cut(s) 614, 646
AluBI AGCT 5 cut(s) 147, 156, 459, 513, 911
AluI AGCT 5 cut(s) 147, 156, 459, 513, 911
Alw21I GWGCWC 1 cut(s) 319
Alw26I GTCTC 4 cut(s) 78, 170, 444, 479
AlwI GGATC 3 cut(s) 665, 736, 906
AoxI GGCC 1 cut(s) 1038
ApoI RAATTY 1 cut(s) 180
AspA2I CCTAGG 1 cut(s) 200
AspS9I GGNCC 4 cut(s) 835, 1000, 1039, 1217
AsuHPI GGTGA 2 cut(s) 113, 512
AsuII TTCGAA 1 cut(s) 642
AvaII GGWCC 3 cut(s) 835, 1000, 1217
AvrII CCTAGG 1 cut(s) 200
BaeI ACNNNNGTAYC 2 cut(s) 353, 386
BanI GGYRCC 2 cut(s) 321, 566
BbrPI CACGTG 1 cut(s) 1136
Bbv12I GWGCWC 1 cut(s) 319
BccI CCATC 1 cut(s) 761
BceAI ACGGC 2 cut(s) 335, 1225
BciT130I CCWGG 2 cut(s) 447, 687
BcoDI GTCTC 4 cut(s) 78, 170, 444, 479
BfaI CTAG 5 cut(s) 144, 201, 851, 1118, 1157
BfmI CTRYAG 1 cut(s) 559
BfrI CTTAAG 1 cut(s) 8
BglI GCCNNNNNGGC 1 cut(s) 1046
BglII AGATCT 1 cut(s) 278
BlnI CCTAGG 1 cut(s) 200
BmcAI AGTACT 1 cut(s) 557
Bme1390I CCNGG 2 cut(s) 447, 687
Bme18I GGWCC 3 cut(s) 835, 1000, 1217
BmgT120I GGNCC 4 cut(s) 835, 1000, 1039, 1217
BmiI GGNNCC 4 cut(s) 197, 323, 568, 1001
BmrFI CCNGG 2 cut(s) 447, 687
BmsI GCATC 3 cut(s) 66, 949, 1155
BpmI CTGGAG 2 cut(s) 468, 481
Bpu14I TTCGAA 1 cut(s) 642
BpuEI CTTGAG 4 cut(s) 111, 145, 172, 946
Bsa29I ATCGAT 1 cut(s) 675
BsaAI YACGTR 1 cut(s) 1136
BsaBI GATNNNNATC 2 cut(s) 903, 1145
BsaI GGTCTC 1 cut(s) 479
BsaJI CCNNGG 4 cut(s) 110, 200, 546, 1035
BsaXI ACNNNNNCTCC 4 cut(s) 90, 120, 819, 849
Bsc4I CCNNNNNNNGG 4 cut(s) 243, 311, 844, 1208
Bse3DI GCAATG 1 cut(s) 385
Bse8I GATNNNNATC 2 cut(s) 903, 1145
BseBI CCWGG 2 cut(s) 447, 687
BseCI ATCGAT 1 cut(s) 675
BseDI CCNNGG 4 cut(s) 110, 200, 546, 1035
BseJI GATNNNNATC 2 cut(s) 903, 1145
BseLI CCNNNNNNNGG 4 cut(s) 243, 311, 844, 1208
BseMI GCAATG 1 cut(s) 385
BseMII CTCAG 3 cut(s) 162, 266, 402
BseRI GAGGAG 1 cut(s) 902
BseYI CCCAGC 1 cut(s) 133
BsgI GTGCAG 1 cut(s) 603
Bsh1236I CGCG 1 cut(s) 368
BshFI GGCC 1 cut(s) 1040
BshNI GGYRCC 2 cut(s) 321, 566
BshVI ATCGAT 1 cut(s) 675
BsiHKAI GWGCWC 1 cut(s) 319
BsiSI CCGG 1 cut(s) 1046
BslFI GGGAC 3 cut(s) 116, 623, 1013
BslI CCNNNNNNNGG 4 cut(s) 243, 311, 844, 1208
BsmAI GTCTC 4 cut(s) 78, 170, 444, 479
BsmFI GGGAC 3 cut(s) 116, 623, 1013
BsnI GGCC 1 cut(s) 1040
Bso31I GGTCTC 1 cut(s) 479
Bsp119I TTCGAA 1 cut(s) 642
Bsp1286I GDGCHC 1 cut(s) 319
Bsp143I GATC 6 cut(s) 278, 657, 672, 741, 757, 898
Bsp19I CCATGG 1 cut(s) 110
BspANI GGCC 1 cut(s) 1040
BspCNI CTCAG 3 cut(s) 163, 267, 401
BspDI ATCGAT 1 cut(s) 675
BspFNI CGCG 1 cut(s) 368
BspLI GGNNCC 4 cut(s) 197, 323, 568, 1001
BspPI GGATC 3 cut(s) 665, 736, 906
BspQI GCTCTTC 1 cut(s) 238
BspT104I TTCGAA 1 cut(s) 642
BspT107I GGYRCC 2 cut(s) 321, 566
BspTI CTTAAG 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 479
BsrDI GCAATG 1 cut(s) 385
BssECI CCNNGG 4 cut(s) 110, 200, 546, 1035
BssMI GATC 6 cut(s) 278, 657, 672, 741, 757, 898
BssT1I CCWWGG 4 cut(s) 110, 200, 546, 1035
Bst2UI CCWGG 2 cut(s) 447, 687
Bst4CI ACNGT 3 cut(s) 215, 355, 560
Bst6I CTCTTC 4 cut(s) 76, 238, 532, 1162
BstAFI CTTAAG 1 cut(s) 8
BstAPI GCANNNNNTGC 2 cut(s) 51, 701
BstBAI YACGTR 1 cut(s) 1136
BstBI TTCGAA 1 cut(s) 642
BstC8I GCNNGC 1 cut(s) 913
BstDEI CTNAG 6 cut(s) 23, 171, 258, 275, 337, 388
BstDSI CCRYGG 1 cut(s) 110
BstENI CCTNNNNNAGG 1 cut(s) 842
BstFNI CGCG 1 cut(s) 368
BstKTI GATC 6 cut(s) 281, 660, 675, 744, 760, 901
BstMAI GTCTC 4 cut(s) 78, 170, 444, 479
BstMBI GATC 6 cut(s) 278, 657, 672, 741, 757, 898
BstMWI GCNNNNNNNGC 4 cut(s) 51, 153, 701, 1046
BstNI CCWGG 2 cut(s) 447, 687
BstSCI CCNGG 2 cut(s) 445, 685
BstSFI CTRYAG 1 cut(s) 559
BstUI CGCG 1 cut(s) 368
BstX2I RGATCY 1 cut(s) 278
BstXI CCANNNNNNTGG 1 cut(s) 496
BstYI RGATCY 1 cut(s) 278
Bsu15I ATCGAT 1 cut(s) 675
BsuRI GGCC 1 cut(s) 1040
BsuTUI ATCGAT 1 cut(s) 675
BtgI CCRYGG 1 cut(s) 110
BtsIMutI CAGTG 1 cut(s) 351
Cac8I GCNNGC 1 cut(s) 913
Cfr13I GGNCC 4 cut(s) 835, 1000, 1039, 1217
ClaI ATCGAT 1 cut(s) 675
Csp6I GTAC 7 cut(s) 35, 216, 265, 362, 534, 556, 986
CspCI CAANNNNNGTGG 2 cut(s) 635, 670
CviAII CATG 5 cut(s) 92, 111, 270, 701, 793
CviQI GTAC 7 cut(s) 35, 216, 265, 362, 534, 556, 986
DdeI CTNAG 6 cut(s) 23, 171, 258, 275, 337, 388
DpnI GATC 6 cut(s) 280, 659, 674, 743, 759, 900
DpnII GATC 6 cut(s) 278, 657, 672, 741, 757, 898
Eam1104I CTCTTC 4 cut(s) 76, 238, 532, 1162
EarI CTCTTC 4 cut(s) 76, 238, 532, 1162
Eco130I CCWWGG 4 cut(s) 110, 200, 546, 1035
Eco31I GGTCTC 1 cut(s) 479
Eco47I GGWCC 3 cut(s) 835, 1000, 1217
Eco72I CACGTG 1 cut(s) 1136
EcoNI CCTNNNNNAGG 1 cut(s) 842
EcoO109I RGGNCCY 1 cut(s) 835
EcoRII CCWGG 2 cut(s) 445, 685
EcoT14I CCWWGG 4 cut(s) 110, 200, 546, 1035
EcoT22I ATGCAT 1 cut(s) 706
ErhI CCWWGG 4 cut(s) 110, 200, 546, 1035
FaeI CATG 5 cut(s) 95, 114, 273, 704, 796
FaqI GGGAC 3 cut(s) 116, 623, 1013
FatI CATG 5 cut(s) 91, 110, 269, 700, 792
FblI GTMKAC 2 cut(s) 442, 1111
FspBI CTAG 5 cut(s) 144, 201, 851, 1118, 1157
GsaI CCCAGC 1 cut(s) 137
GsuI CTGGAG 2 cut(s) 468, 481
HaeIII GGCC 1 cut(s) 1040
HapII CCGG 1 cut(s) 1046
Hin1II CATG 5 cut(s) 95, 114, 273, 704, 796
HinfI GANTC 6 cut(s) 4, 39, 301, 716, 1121, 1170
HpaII CCGG 1 cut(s) 1046
HphI GGTGA 2 cut(s) 113, 512
Hpy166II GTNNAC 5 cut(s) 121, 443, 1112, 1217, 1230
Hpy188I TCNGA 6 cut(s) 172, 283, 391, 591, 944, 1054
Hpy188III TCNNGA 3 cut(s) 312, 764, 1118
Hpy8I GTNNAC 5 cut(s) 121, 443, 1112, 1217, 1230
HpyAV CCTTC 5 cut(s) 148, 755, 791, 869, 1052
HpyCH4III ACNGT 3 cut(s) 215, 355, 560
HpyCH4IV ACGT 2 cut(s) 218, 1135
HpyCH4V TGCA 9 cut(s) 54, 343, 584, 628, 704, 1019, 1069, 1080, 1091
HpyF10VI GCNNNNNNNGC 4 cut(s) 51, 153, 701, 1046
HpyF3I CTNAG 6 cut(s) 23, 171, 258, 275, 337, 388
HpySE526I ACGT 2 cut(s) 218, 1135
Hsp92II CATG 5 cut(s) 95, 114, 273, 704, 796
Kzo9I GATC 6 cut(s) 278, 657, 672, 741, 757, 898
LguI GCTCTTC 1 cut(s) 238
LmnI GCTCC 2 cut(s) 100, 314
LweI GCATC 3 cut(s) 66, 949, 1155
MaeI CTAG 5 cut(s) 144, 201, 851, 1118, 1157
MaeII ACGT 2 cut(s) 218, 1135
MaeIII GTNAC 1 cut(s) 500
MalI GATC 6 cut(s) 280, 659, 674, 743, 759, 900
MboI GATC 6 cut(s) 278, 657, 672, 741, 757, 898
MboII GAAGA 8 cut(s) 93, 225, 519, 783, 884, 1023, 1141, 1179
MfeI CAATTG 1 cut(s) 287
MflI RGATCY 1 cut(s) 278
MhlI GDGCHC 1 cut(s) 319
MluCI AATT 8 cut(s) 180, 208, 287, 306, 428, 623, 649, 1075
MlyI GAGTC 1 cut(s) 1179
Mph1103I ATGCAT 1 cut(s) 706
MseI TTAA 3 cut(s) 9, 414, 1241
MslI CAYNNNNRTG 2 cut(s) 617, 753
MspA1I CMGCKG 1 cut(s) 911
MspCI CTTAAG 1 cut(s) 8
MspI CCGG 1 cut(s) 1046
MspR9I CCNGG 2 cut(s) 447, 687
MunI CAATTG 1 cut(s) 287
MvaI CCWGG 2 cut(s) 447, 687
MvnI CGCG 1 cut(s) 368
MwoI GCNNNNNNNGC 4 cut(s) 51, 153, 701, 1046
NcoI CCATGG 1 cut(s) 110
NdeII GATC 6 cut(s) 278, 657, 672, 741, 757, 898
NlaIII CATG 5 cut(s) 95, 114, 273, 704, 796
NlaIV GGNNCC 4 cut(s) 197, 323, 568, 1001
NmuCI GTSAC 1 cut(s) 500
NsiI ATGCAT 1 cut(s) 706
NspV TTCGAA 1 cut(s) 642
PciSI GCTCTTC 1 cut(s) 238
PfeI GAWTC 5 cut(s) 4, 39, 301, 716, 1121
PflMI CCANNNNNTGG 1 cut(s) 243
PfoI TCCNGGA 1 cut(s) 685
PleI GAGTC 1 cut(s) 1178
PmaCI CACGTG 1 cut(s) 1136
PmlI CACGTG 1 cut(s) 1136
PpsI GAGTC 1 cut(s) 1178
Ppu21I YACGTR 1 cut(s) 1136
PpuMI RGGWCCY 1 cut(s) 835
Psp5II RGGWCCY 1 cut(s) 835
Psp6I CCWGG 2 cut(s) 445, 685
PspCI CACGTG 1 cut(s) 1136
PspFI CCCAGC 1 cut(s) 133
PspGI CCWGG 2 cut(s) 445, 685
PspN4I GGNNCC 4 cut(s) 197, 323, 568, 1001
PspPI GGNCC 4 cut(s) 835, 1000, 1039, 1217
PspPPI RGGWCCY 1 cut(s) 835
PsuI RGATCY 1 cut(s) 278
PvuII CAGCTG 1 cut(s) 911
RsaI GTAC 7 cut(s) 36, 217, 266, 363, 535, 557, 987
RsaNI GTAC 7 cut(s) 35, 216, 265, 362, 534, 556, 986
RseI CAYNNNNRTG 2 cut(s) 617, 753
SapI GCTCTTC 1 cut(s) 238
SaqAI TTAA 3 cut(s) 9, 414, 1241
Sau3AI GATC 6 cut(s) 278, 657, 672, 741, 757, 898
Sau96I GGNCC 4 cut(s) 835, 1000, 1039, 1217
ScaI AGTACT 1 cut(s) 557
SchI GAGTC 1 cut(s) 1179
ScrFI CCNGG 2 cut(s) 447, 687
SduI GDGCHC 1 cut(s) 319
SfaNI GCATC 3 cut(s) 66, 949, 1155
SfcI CTRYAG 1 cut(s) 559
SfuI TTCGAA 1 cut(s) 642
SinI GGWCC 3 cut(s) 835, 1000, 1217
SmiMI CAYNNNNRTG 2 cut(s) 617, 753
SmlI CTYRAG 5 cut(s) 8, 126, 151, 160, 925
SmoI CTYRAG 5 cut(s) 8, 126, 151, 160, 925
Sse9I AATT 8 cut(s) 180, 208, 287, 306, 428, 623, 649, 1075
SspI AATATT 1 cut(s) 1008
SspMI CTAG 5 cut(s) 144, 201, 851, 1118, 1157
StyD4I CCNGG 2 cut(s) 445, 685
StyI CCWWGG 4 cut(s) 110, 200, 546, 1035
TaaI ACNGT 3 cut(s) 215, 355, 560
TaiI ACGT 2 cut(s) 221, 1138
TaqI TCGA 6 cut(s) 31, 74, 642, 675, 843, 1173
TaqII GACCGA 1 cut(s) 1234
TasI AATT 8 cut(s) 180, 208, 287, 306, 428, 623, 649, 1075
TatI WGTACW 1 cut(s) 555
TfiI GAWTC 5 cut(s) 4, 39, 301, 716, 1121
Tru1I TTAA 3 cut(s) 9, 414, 1241
Tru9I TTAA 3 cut(s) 9, 414, 1241
TscAI CASTG 1 cut(s) 358
TseFI GTSAC 1 cut(s) 500
Tsp45I GTSAC 1 cut(s) 500
TspDTI ATGAA 2 cut(s) 80, 737
TspRI CASTG 1 cut(s) 358
Van91I CCANNNNNTGG 1 cut(s) 243
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 3 cut(s) 835, 1000, 1217
XagI CCTNNNNNAGG 1 cut(s) 842
XapI RAATTY 1 cut(s) 180
XbaI TCTAGA 1 cut(s) 1117
XcmI CCANNNNNNNNNTGG 1 cut(s) 108
XmaJI CCTAGG 1 cut(s) 200
XmiI GTMKAC 2 cut(s) 442, 1111
XspI CTAG 5 cut(s) 144, 201, 851, 1118, 1157
ZrmI AGTACT 1 cut(s) 557
Zsp2I ATGCAT 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.