RLG00000035608

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000144
Physical Location & Seq
Forward (+)
69282976 .. 69284541
1566 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035608

Sequence Viewer

Length: 1497 bp
ATGGAGTTCATGATTAAAACTGTATTAGTTTGCGGTTGCTTAGTGTTTGGTGGTGTGGTGATTAAGAGACTATTCCGTCACAAGCCCTGCTGGGAGACACTACCTGACGATATCATGGAGGTTATTGTGCCACACCTGAGTGTACGTGATCGTAGACGCTTAAGCCTAGTTTGCAAGCCATGGAGCTCAGTTCCTATGCGCAAAGACATCCCTAGTTCTCCTCACAAACTCCCCTGGTTAGTACTCCCTCAACCTGAATCTCAAGCTCTAACTTGCAATGATACCTCCTTAAGCTTTTACGACCTCCATGACGGCAAAGTTGTTAAGTTGGAGCTGCCTGAACCTGTTCGTGGAGCGTGGTTTCGAGGGTCTTCGAAAGGTTGGTTGATTATGATTAAGGAAAGTGAACAAAACACTACAACATTTCTGGTAAATCCAATTTCAGGAGTCCAACACCAACTTCCGTCCTTGAGAACGATTCCGTCTTTCCAGAAGTATGTAGAAACGAAGAAATGGAAACGATATGGTGCCTTTGCTTTCTACAACTGCCTTGTGCTATCTACCTCAGATATTAATTCGGATGAATGTGTGGTAGCAGCTGTTCTTGGGTGTGCCAATGATATATTGGGTTTGTGCAGACCTGGAGACAAAGAATGGAATATCTTTCGGTTATTAGATGCAGATGAAGCTTTGACTGATTTACTGTTTTGTTCTGGCAAGCTATACGCCTTGGTTGTGAGTAATAATAAGTCCGGCGTTGTTTCAACTGCTCGTACGTTGAATTTTGGAGATCATTCGGTGGAACTGAAATTAATCTATAACGCAAATAAAAACTTCGATCCTAACTTTGAATATCATGGTAACTATGAGATCGACGTACAAGGCTATGTTGACTCATATTTGATAGAGTCTGCAACCAATATGGAAGTATTGTTGATCCACCAAATTTTAGATGTATTTTCGAGCATGGGTGACAACAACAACGGAGAGAATGGTGGTGGCGGCAACCATGAGGAAGAGGAAGAGGAAGTGGAAGTGGAAGTGGAAGTCGAAGGCAATGACGGTGGTGATGACGCCAATGAGGAATGGAACAACTTGGGAGGAGATGGTGGTGATATAGGTGGTTGGGGCATCAACATTGTTGAGGAAGATGATCATTATCTACGTACATATTTGAGGACAAGTGGTTTTGATGTATACAGGCTTGATCCACAGAATGACAATTTCGAAATGGTACAAAGTTTGGGGGATAAGCTATTATTTTTGTCAAACGGTGGTTCATTTTCCCTCCGGGCAAGTGATATCAAAATCAAAGACTTCAGAGGGAATTGCATTTGTTTTGCAACAAATAATTTCATGAGTTTACATTCTTTAGAAACATATACCTGTCGGGAGATTGGTGTATTTGACTTGAATACAAGAAGAATTCGGCGACCTTTCCCGAGTGTAGAGGTGTCAATTCGGTCTCAACTCTCTTGGTTCACTCCAATGTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

499

Amino Acids

56.18

Weight (kDa)

4.93

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 99 - 470 4.1e-39 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1495
AasI GACNNNNNNGTC 1 cut(s) 75
Acc16I TGCGCA 1 cut(s) 200
AccB1I GGYRCC 1 cut(s) 527
AccI GTMKAC 2 cut(s) 154, 1197
AciI CCGC 2 cut(s) 33, 1002
AclWI GGATC 3 cut(s) 833, 931, 1202
AcsI RAATTY 3 cut(s) 781, 945, 1425
AcuI CTGAAG 1 cut(s) 1303
AcyI GRCGYC 1 cut(s) 1074
AfaI GTAC 6 cut(s) 144, 243, 775, 879, 1168, 1236
AfiI CCNNNNNNNGG 2 cut(s) 350, 443
AflII CTTAAG 2 cut(s) 160, 289
AgsI TTSAA 4 cut(s) 765, 781, 851, 1414
AjnI CCWGG 2 cut(s) 233, 640
AjuI GAANNNNNNNTTGG 2 cut(s) 444, 476
AleI CACNNNNGTG 1 cut(s) 138
AluBI AGCT 8 cut(s) 186, 266, 294, 334, 599, 689, 721, 1255
AluI AGCT 8 cut(s) 186, 266, 294, 334, 599, 689, 721, 1255
Alw21I GWGCWC 1 cut(s) 188
Alw26I GTCTC 4 cut(s) 61, 89, 639, 1470
AlwI GGATC 3 cut(s) 833, 931, 1202
Ama87I CYCGRG 1 cut(s) 1441
ApeKI GCWGC 2 cut(s) 334, 596
ApoI RAATTY 3 cut(s) 781, 945, 1425
AseI ATTAAT 2 cut(s) 573, 812
Asp700I GAANNNNTTC 1 cut(s) 345
AspLEI GCGC 1 cut(s) 201
AsuC2I CCSGG 1 cut(s) 1292
AsuHPI GGTGA 4 cut(s) 70, 983, 1079, 1124
AsuII TTCGAA 2 cut(s) 374, 1227
AvaI CYCGRG 1 cut(s) 1441
BanI GGYRCC 1 cut(s) 527
BanII GRGCYC 1 cut(s) 188
BbsI GAAGAC 1 cut(s) 363
Bbv12I GWGCWC 1 cut(s) 188
BbvI GCAGC 2 cut(s) 321, 608
BccI CCATC 1 cut(s) 1100
BceAI ACGGC 1 cut(s) 328
BciT130I CCWGG 2 cut(s) 235, 642
BclI TGATCA 1 cut(s) 1153
BcnI CCSGG 1 cut(s) 1292
BcoDI GTCTC 4 cut(s) 61, 89, 639, 1470
BfaI CTAG 2 cut(s) 167, 213
BfrI CTTAAG 2 cut(s) 160, 289
BisI GCNGC 3 cut(s) 335, 597, 1003
BlsI GCNGC 3 cut(s) 336, 598, 1004
BmcAI AGTACT 1 cut(s) 243
Bme1390I CCNGG 3 cut(s) 235, 642, 1292
BmeT110I CYCGRG 1 cut(s) 1441
BmiI GGNNCC 1 cut(s) 529
BmrFI CCNGG 3 cut(s) 235, 642, 1292
BmsI GCATC 2 cut(s) 667, 1140
BpiI GAAGAC 1 cut(s) 363
BpmI CTGGAG 1 cut(s) 663
Bpu14I TTCGAA 2 cut(s) 374, 1227
BpuEI CTTGAG 2 cut(s) 246, 490
BpuMI CCSGG 1 cut(s) 1292
BsaAI YACGTR 2 cut(s) 146, 1166
BsaBI GATNNNNATC 1 cut(s) 1158
BsaHI GRCGYC 1 cut(s) 1074
BsaI GGTCTC 1 cut(s) 1470
BsaJI CCNNGG 3 cut(s) 179, 233, 729
Bsc4I CCNNNNNNNGG 2 cut(s) 350, 443
Bse3DI GCAATG 2 cut(s) 283, 1063
Bse8I GATNNNNATC 1 cut(s) 1158
BseBI CCWGG 2 cut(s) 235, 642
BseDI CCNNGG 3 cut(s) 179, 233, 729
BseGI GGATG 2 cut(s) 207, 586
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 2 cut(s) 350, 443
BseMI GCAATG 2 cut(s) 283, 1063
BseMII CTCAG 3 cut(s) 128, 201, 579
BseRI GAGGAG 2 cut(s) 210, 1116
BseXI GCAGC 2 cut(s) 321, 608
BseYI CCCAGC 1 cut(s) 90
BsgI GTGCAG 1 cut(s) 655
BshNI GGYRCC 1 cut(s) 527
BsiHKAI GWGCWC 1 cut(s) 188
BsiHKCI CYCGRG 1 cut(s) 1441
BsiSI CCGG 2 cut(s) 753, 1291
BsiWI CGTACG 1 cut(s) 773
BslI CCNNNNNNNGG 2 cut(s) 350, 443
BsmAI GTCTC 4 cut(s) 61, 89, 639, 1470
Bso31I GGTCTC 1 cut(s) 1470
BsoBI CYCGRG 1 cut(s) 1441
Bsp119I TTCGAA 2 cut(s) 374, 1227
Bsp1286I GDGCHC 1 cut(s) 188
Bsp143I GATC 7 cut(s) 148, 790, 838, 870, 936, 1153, 1207
Bsp19I CCATGG 1 cut(s) 179
BspACI CCGC 2 cut(s) 33, 1002
BspCNI CTCAG 3 cut(s) 129, 200, 578
BspHI TCATGA 2 cut(s) 9, 1356
BspLI GGNNCC 1 cut(s) 529
BspPI GGATC 3 cut(s) 833, 931, 1202
BspT104I TTCGAA 2 cut(s) 374, 1227
BspT107I GGYRCC 1 cut(s) 527
BspTI CTTAAG 2 cut(s) 160, 289
BspTNI GGTCTC 1 cut(s) 1470
BsrDI GCAATG 2 cut(s) 283, 1063
BssECI CCNNGG 3 cut(s) 179, 233, 729
BssMI GATC 7 cut(s) 148, 790, 838, 870, 936, 1153, 1207
BssNAI GTATAC 1 cut(s) 1198
BssNI GRCGYC 1 cut(s) 1074
BssT1I CCWWGG 2 cut(s) 179, 729
Bst1107I GTATAC 1 cut(s) 1198
Bst2UI CCWGG 2 cut(s) 235, 642
Bst4CI ACNGT 4 cut(s) 22, 705, 1064, 1274
Bst6I CTCTTC 2 cut(s) 1011, 1017
BstACI GRCGYC 1 cut(s) 1074
BstAFI CTTAAG 2 cut(s) 160, 289
BstBAI YACGTR 2 cut(s) 146, 1166
BstBI TTCGAA 2 cut(s) 374, 1227
BstC8I GCNNGC 2 cut(s) 176, 719
BstDEI CTNAG 4 cut(s) 40, 137, 187, 565
BstDSI CCRYGG 1 cut(s) 179
BstF5I GGATG 2 cut(s) 207, 586
BstHHI GCGC 1 cut(s) 201
BstKTI GATC 7 cut(s) 151, 793, 841, 873, 939, 1156, 1210
BstMAI GTCTC 4 cut(s) 61, 89, 639, 1470
BstMBI GATC 7 cut(s) 148, 790, 838, 870, 936, 1153, 1207
BstMWI GCNNNNNNNGC 2 cut(s) 171, 686
BstNI CCWGG 2 cut(s) 235, 642
BstSCI CCNGG 3 cut(s) 233, 640, 1290
BstSNI TACGTA 1 cut(s) 1166
BstV1I GCAGC 2 cut(s) 321, 608
BstV2I GAAGAC 1 cut(s) 363
BstZ17I GTATAC 1 cut(s) 1198
BtgI CCRYGG 1 cut(s) 179
BtsCI GGATG 2 cut(s) 207, 586
Cac8I GCNNGC 2 cut(s) 176, 719
CciI TCATGA 2 cut(s) 9, 1356
CfoI GCGC 1 cut(s) 201
CseI GACGC 2 cut(s) 165, 1082
Csp6I GTAC 6 cut(s) 143, 242, 774, 878, 1167, 1235
CspCI CAANNNNNGTGG 2 cut(s) 1045, 1080
CviAII CATG 8 cut(s) 10, 115, 180, 308, 857, 967, 1010, 1357
CviQI GTAC 6 cut(s) 143, 242, 774, 878, 1167, 1235
DdeI CTNAG 4 cut(s) 40, 137, 187, 565
DpnI GATC 7 cut(s) 150, 792, 840, 872, 938, 1155, 1209
DpnII GATC 7 cut(s) 148, 790, 838, 870, 936, 1153, 1207
DrdI GACNNNNNNGTC 1 cut(s) 75
DseDI GACNNNNNNGTC 1 cut(s) 75
Eam1104I CTCTTC 2 cut(s) 1011, 1017
EarI CTCTTC 2 cut(s) 1011, 1017
Ecl136II GAGCTC 1 cut(s) 186
Eco105I TACGTA 1 cut(s) 1166
Eco130I CCWWGG 2 cut(s) 179, 729
Eco24I GRGCYC 1 cut(s) 188
Eco31I GGTCTC 1 cut(s) 1470
Eco32I GATATC 2 cut(s) 112, 1303
Eco53kI GAGCTC 1 cut(s) 186
Eco57I CTGAAG 1 cut(s) 1303
Eco88I CYCGRG 1 cut(s) 1441
EcoICRI GAGCTC 1 cut(s) 186
EcoRI GAATTC 1 cut(s) 1425
EcoRII CCWGG 2 cut(s) 233, 640
EcoRV GATATC 2 cut(s) 112, 1303
EcoT14I CCWWGG 2 cut(s) 179, 729
EcoT38I GRGCYC 1 cut(s) 188
ErhI CCWWGG 2 cut(s) 179, 729
FaeI CATG 8 cut(s) 13, 118, 183, 311, 860, 970, 1013, 1360
FatI CATG 8 cut(s) 9, 114, 179, 307, 856, 966, 1009, 1356
FbaI TGATCA 1 cut(s) 1153
FblI GTMKAC 2 cut(s) 154, 1197
Fnu4HI GCNGC 3 cut(s) 335, 597, 1003
FokI GGATG 2 cut(s) 194, 593
FriOI GRGCYC 1 cut(s) 188
Fsp4HI GCNGC 3 cut(s) 335, 597, 1003
FspBI CTAG 2 cut(s) 167, 213
FspI TGCGCA 1 cut(s) 200
GlaI GCGC 1 cut(s) 200
GluI GCNGC 3 cut(s) 335, 597, 1003
GsaI CCCAGC 1 cut(s) 94
GsuI CTGGAG 1 cut(s) 663
HapII CCGG 2 cut(s) 753, 1291
HgaI GACGC 2 cut(s) 165, 1082
HhaI GCGC 1 cut(s) 201
Hin1I GRCGYC 1 cut(s) 1074
Hin1II CATG 8 cut(s) 13, 118, 183, 311, 860, 970, 1013, 1360
Hin6I GCGC 1 cut(s) 199
HinP1I GCGC 1 cut(s) 199
HincII GTYRAC 1 cut(s) 892
HindII GTYRAC 1 cut(s) 892
HindIII AAGCTT 2 cut(s) 292, 687
HinfI GANTC 5 cut(s) 257, 447, 478, 893, 908
HpaII CCGG 2 cut(s) 753, 1291
HphI GGTGA 4 cut(s) 70, 983, 1079, 1124
Hpy166II GTNNAC 7 cut(s) 143, 155, 407, 892, 1198, 1364, 1482
Hpy188I TCNGA 3 cut(s) 568, 580, 1322
Hpy188III TCNNGA 6 cut(s) 10, 444, 490, 1357, 1391, 1441
Hpy8I GTNNAC 7 cut(s) 143, 155, 407, 892, 1198, 1364, 1482
Hpy99I CGWCG 1 cut(s) 878
HpyAV CCTTC 1 cut(s) 1046
HpyCH4III ACNGT 4 cut(s) 22, 705, 1064, 1274
HpyCH4IV ACGT 4 cut(s) 145, 776, 876, 1165
HpyCH4V TGCA 7 cut(s) 174, 276, 636, 680, 914, 1332, 1343
HpyF10VI GCNNNNNNNGC 2 cut(s) 171, 686
HpyF3I CTNAG 4 cut(s) 40, 137, 187, 565
HpySE526I ACGT 4 cut(s) 145, 776, 876, 1165
Hsp92I GRCGYC 1 cut(s) 1074
Hsp92II CATG 8 cut(s) 13, 118, 183, 311, 860, 970, 1013, 1360
HspAI GCGC 1 cut(s) 199
Ksp22I TGATCA 1 cut(s) 1153
Kzo9I GATC 7 cut(s) 148, 790, 838, 870, 936, 1153, 1207
LmnI GCTCC 3 cut(s) 183, 331, 353
Lsp1109I GCAGC 2 cut(s) 321, 608
LweI GCATC 2 cut(s) 667, 1140
MaeI CTAG 2 cut(s) 167, 213
MaeII ACGT 4 cut(s) 145, 776, 876, 1165
MaeIII GTNAC 3 cut(s) 77, 860, 971
MalI GATC 7 cut(s) 150, 792, 840, 872, 938, 1155, 1209
MboI GATC 7 cut(s) 148, 790, 838, 870, 936, 1153, 1207
MboII GAAGA 6 cut(s) 363, 520, 1028, 1034, 1160, 1434
MhlI GDGCHC 1 cut(s) 188
MlyI GAGTC 3 cut(s) 456, 887, 917
MmeI TCCRAC 2 cut(s) 309, 475
MroXI GAANNNNTTC 1 cut(s) 345
MseI TTAA 8 cut(s) 15, 63, 161, 290, 324, 396, 573, 812
MslI CAYNNNNRTG 2 cut(s) 138, 1487
MspA1I CMGCKG 1 cut(s) 599
MspCI CTTAAG 2 cut(s) 160, 289
MspI CCGG 2 cut(s) 753, 1291
MspR9I CCNGG 3 cut(s) 235, 642, 1292
MvaI CCWGG 2 cut(s) 235, 642
MwoI GCNNNNNNNGC 2 cut(s) 171, 686
NciI CCSGG 1 cut(s) 1292
NcoI CCATGG 1 cut(s) 179
NdeII GATC 7 cut(s) 148, 790, 838, 870, 936, 1153, 1207
NlaIII CATG 8 cut(s) 13, 118, 183, 311, 860, 970, 1013, 1360
NlaIV GGNNCC 1 cut(s) 529
NmuCI GTSAC 2 cut(s) 77, 971
NsbI TGCGCA 1 cut(s) 200
NspV TTCGAA 2 cut(s) 374, 1227
OliI CACNNNNGTG 1 cut(s) 138
PagI TCATGA 2 cut(s) 9, 1356
PdmI GAANNNNTTC 1 cut(s) 345
PfeI GAWTC 2 cut(s) 257, 478
Pfl23II CGTACG 1 cut(s) 773
PkrI GCNGC 3 cut(s) 336, 598, 1004
PleI GAGTC 3 cut(s) 455, 887, 916
PpsI GAGTC 3 cut(s) 455, 887, 916
Ppu21I YACGTR 2 cut(s) 146, 1166
PshBI ATTAAT 2 cut(s) 573, 812
PsiI TTATAA 1 cut(s) 1495
Psp124BI GAGCTC 1 cut(s) 188
Psp6I CCWGG 2 cut(s) 233, 640
PspFI CCCAGC 1 cut(s) 90
PspGI CCWGG 2 cut(s) 233, 640
PspLI CGTACG 1 cut(s) 773
PspN4I GGNNCC 1 cut(s) 529
PsrI GAACNNNNNNTAC 2 cut(s) 585, 617
PvuII CAGCTG 1 cut(s) 599
RsaI GTAC 6 cut(s) 144, 243, 775, 879, 1168, 1236
RsaNI GTAC 6 cut(s) 143, 242, 774, 878, 1167, 1235
RseI CAYNNNNRTG 2 cut(s) 138, 1487
SacI GAGCTC 1 cut(s) 188
SaqAI TTAA 8 cut(s) 15, 63, 161, 290, 324, 396, 573, 812
SatI GCNGC 3 cut(s) 335, 597, 1003
Sau3AI GATC 7 cut(s) 148, 790, 838, 870, 936, 1153, 1207
ScaI AGTACT 1 cut(s) 243
SchI GAGTC 3 cut(s) 456, 887, 917
ScrFI CCNGG 3 cut(s) 235, 642, 1292
SduI GDGCHC 1 cut(s) 188
SfaNI GCATC 2 cut(s) 667, 1140
SfuI TTCGAA 2 cut(s) 374, 1227
SmiMI CAYNNNNRTG 2 cut(s) 138, 1487
SmlI CTYRAG 4 cut(s) 160, 261, 289, 469
SmoI CTYRAG 4 cut(s) 160, 261, 289, 469
SnaBI TACGTA 1 cut(s) 1166
SsiI CCGC 2 cut(s) 33, 1002
SspMI CTAG 2 cut(s) 167, 213
SstI GAGCTC 1 cut(s) 188
StyD4I CCNGG 3 cut(s) 233, 640, 1290
StyI CCWWGG 2 cut(s) 179, 729
TaaI ACNGT 4 cut(s) 22, 705, 1064, 1274
TaiI ACGT 4 cut(s) 148, 779, 879, 1168
TaqI TCGA 7 cut(s) 364, 374, 837, 873, 962, 1050, 1227
TaqII GACCGA 1 cut(s) 1452
TatI WGTACW 1 cut(s) 241
TauI GCSGC 1 cut(s) 1005
TfiI GAWTC 2 cut(s) 257, 478
Tru1I TTAA 8 cut(s) 15, 63, 161, 290, 324, 396, 573, 812
Tru9I TTAA 8 cut(s) 15, 63, 161, 290, 324, 396, 573, 812
TseFI GTSAC 2 cut(s) 77, 971
TseI GCWGC 2 cut(s) 334, 596
Tsp45I GTSAC 2 cut(s) 77, 971
TspDTI ATGAA 4 cut(s) 597, 699, 1269, 1345
TspGWI ACGGA 4 cut(s) 65, 453, 471, 999
Vha464I CTTAAG 2 cut(s) 160, 289
VspI ATTAAT 2 cut(s) 573, 812
XapI RAATTY 3 cut(s) 781, 945, 1425
XcmI CCANNNNNNNNNTGG 1 cut(s) 622
XmiI GTMKAC 2 cut(s) 154, 1197
XmnI GAANNNNTTC 1 cut(s) 345
XspI CTAG 2 cut(s) 167, 213
ZrmI AGTACT 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.