Rroxscaffold_7G00205880

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000144
Physical Location & Seq
Forward (+)
55563471 .. 55566130
2660 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00205880.1

Sequence Viewer

Length: 1368 bp
ATGGTCATGCTCTCTCTATATTTGTCTTACAGTAACTTGGGACACTACCTCCGCTGGTTTACCAGGTCTGTTTCCTTCAAGCAATTACATGAACACAAAATATCTGCAGGCAAGAGAAAACAAATCGAGAACTGCAACGACGACCAAATTACTTGTCATGGGTCAGTTGGGTGCTGGCAGACACCGCCACAAGACATCATGGAGGAGATTCTACAGAAAATGGGTTTAATTGCTCGTACACGCTTAGCCAAGGTCTGCATGTCTTGGAGTTCACTTGTTATGAGAGCTGATATCCGCAGTGCTCCGCAACTGCCATGGTTAGTACACCCTCAAACCCCAAACACCAACTACTTAACCTTTTCCAGCCTCTCTGAGGGTGAAGTTGTGAACTTGGAGCTCCCGAAGCGATTCCGAGGACAAGGCAAGTTCAAGTTTCGAGCGTCTTCTAAAGGTTGGTTGATCATTTTACAAGAAAAAGGGTTCGACTTTGATATGTTCCTTTACAATCCGATTTCTAGAGCCCAACACCAACTTCCTTCCTTAAACACTATTCCATCTTTCCTATCTTTCCAACTAGCAAGAATGCTATGGAATGCTATCAACAATCATGCCAACAAACATGCCGAGAATTTTGTAACTAAAGTCATATTGTCTAGTCCAAATATCTCAGAATGCATTGTGGCTGCCGTTTTAGAGCCTCAGAAGGAATTGGCATTGTGCAGACCTGGAGACAAAAGCTGGACTGTCTTTGAGATACTGAATCATGATGAGGACGACTCTCTCATAGATATACTTTTTTCGCAGGGCATGCTGTACGGATTAGTTGATAATGACGAGTCCACCAAGAATGGCATCGGCGCAGCTCGCATCTTAAACTCTGGAGATGATCAGACAATGACAGTGGAATTGAAGTTGGTCTATGGCCATAAAGAAGTTGGTAATACTACAGAAGATCATGACGACTATCTAATCAACTTAAATAGTGACTTCAACTCATATTTGGTAGAATCAGCAACAAATAGCGACAAGGAAATTTTGTTGATCCATCAGATGCTCGATTCTCTCGACTGTGCTGATGATGATGAGTCGGATATGGAATATCAGAGGACAAGAGGGTTTGTAGTATACAAGATTGACCTCGAGTCTGGCAACTTTCATGAGGCCACTTCAACCGCGTGGTTCTTTGTACTCACCGATCTTGGTCTAGTGATTTCTTCAGCTACGTTTGATCAATTTTCCTCCGAAAGTAATAAGGACCATTCTGCACTAATTAGCATGGTGTTGGCTATTTTGGCTGTGATAATTTCCATCTGGGAGTTCATTCACAAGGGTATATGTTATGAATCTAATATTGGTTGCCAGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

455

Amino Acids

51.56

Weight (kDa)

5.2

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 120 - 390 2.5e-27 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1125
AccII CGCG 1 cut(s) 1175
AciI CCGC 5 cut(s) 52, 185, 295, 305, 1173
AclWI GGATC 1 cut(s) 1036
AcoI YGGCCR 1 cut(s) 922
AcsI RAATTY 2 cut(s) 628, 1032
AcuI CTGAAG 1 cut(s) 1200
AfaI GTAC 4 cut(s) 238, 324, 815, 1188
AfiI CCNNNNNNNGG 1 cut(s) 373
AgsI TTSAA 5 cut(s) 79, 430, 910, 991, 1170
AhdI GACNNNNNGTC 1 cut(s) 1141
AjnI CCWGG 3 cut(s) 62, 724, 1359
AjuI GAANNNNNNNTTGG 4 cut(s) 516, 548, 1335, 1367
AluBI AGCT 5 cut(s) 287, 397, 738, 863, 1220
AluI AGCT 5 cut(s) 287, 397, 738, 863, 1220
Alw21I GWGCWC 2 cut(s) 304, 399
Alw26I GTCTC 1 cut(s) 723
AlwI GGATC 1 cut(s) 1036
Ama87I CYCGRG 1 cut(s) 1139
AoxI GGCC 2 cut(s) 922, 1161
ApeKI GCWGC 2 cut(s) 683, 860
ApoI RAATTY 2 cut(s) 628, 1032
ArsI GACNNNNNNTTYG 2 cut(s) 139, 171
Asp700I GAANNNNTTC 1 cut(s) 407
AspLEI GCGC 1 cut(s) 860
AspS9I GGNCC 1 cut(s) 1255
AsuHPI GGTGA 2 cut(s) 389, 1183
AvaI CYCGRG 1 cut(s) 1139
AvaII GGWCC 1 cut(s) 1255
BalI TGGCCA 1 cut(s) 924
BanII GRGCYC 2 cut(s) 399, 523
BbsI GAAGAC 1 cut(s) 435
Bbv12I GWGCWC 2 cut(s) 304, 399
BbvI GCAGC 2 cut(s) 670, 872
BccI CCATC 3 cut(s) 562, 1053, 1316
BceAI ACGGC 1 cut(s) 671
BciT130I CCWGG 3 cut(s) 64, 726, 1361
BclI TGATCA 3 cut(s) 459, 886, 1228
BcoDI GTCTC 1 cut(s) 723
BfaI CTAG 4 cut(s) 516, 575, 654, 1205
BfmI CTRYAG 3 cut(s) 105, 212, 945
BisI GCNGC 2 cut(s) 684, 861
BlpI GCTNAGC 1 cut(s) 244
BlsI GCNGC 2 cut(s) 685, 862
Bme1390I CCNGG 3 cut(s) 64, 726, 1361
Bme18I GGWCC 1 cut(s) 1255
BmeRI GACNNNNNGTC 1 cut(s) 1141
BmeT110I CYCGRG 1 cut(s) 1139
BmgT120I GGNCC 1 cut(s) 1255
BmrFI CCNGG 3 cut(s) 64, 726, 1361
BmsI GCATC 3 cut(s) 861, 876, 1041
BpiI GAAGAC 1 cut(s) 435
BplI GAGNNNNNCTC 2 cut(s) 761, 793
BpmI CTGGAG 2 cut(s) 747, 900
Bpu1102I GCTNAGC 1 cut(s) 244
BsaJI CCNNGG 3 cut(s) 249, 314, 412
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bsc4I CCNNNNNNNGG 1 cut(s) 373
BseBI CCWGG 3 cut(s) 64, 726, 1361
BseDI CCNNGG 3 cut(s) 249, 314, 412
BseLI CCNNNNNNNGG 1 cut(s) 373
BseMII CTCAG 3 cut(s) 363, 681, 713
BseRI GAGGAG 1 cut(s) 218
BseXI GCAGC 2 cut(s) 670, 872
BsgI GTGCAG 2 cut(s) 739, 1248
Bsh1236I CGCG 1 cut(s) 1175
BshFI GGCC 2 cut(s) 924, 1163
BsiHKAI GWGCWC 2 cut(s) 304, 399
BsiHKCI CYCGRG 1 cut(s) 1139
BslFI GGGAC 1 cut(s) 54
BslI CCNNNNNNNGG 1 cut(s) 373
BsmAI GTCTC 1 cut(s) 723
BsmFI GGGAC 1 cut(s) 54
BsmI GAATGC 3 cut(s) 588, 598, 677
BsnI GGCC 2 cut(s) 924, 1163
BsoBI CYCGRG 1 cut(s) 1139
Bsp1286I GDGCHC 3 cut(s) 304, 399, 523
Bsp143I GATC 6 cut(s) 459, 886, 952, 1041, 1195, 1228
Bsp1720I GCTNAGC 1 cut(s) 244
Bsp19I CCATGG 1 cut(s) 314
BspACI CCGC 5 cut(s) 52, 185, 295, 305, 1173
BspANI GGCC 2 cut(s) 924, 1163
BspCNI CTCAG 3 cut(s) 364, 680, 712
BspFNI CGCG 1 cut(s) 1175
BspHI TCATGA 3 cut(s) 763, 955, 1156
BspMAI CTGCAG 1 cut(s) 109
BspPI GGATC 1 cut(s) 1036
BssECI CCNNGG 3 cut(s) 249, 314, 412
BssMI GATC 6 cut(s) 459, 886, 952, 1041, 1195, 1228
BssNAI GTATAC 1 cut(s) 1126
BssT1I CCWWGG 2 cut(s) 249, 314
Bst1107I GTATAC 1 cut(s) 1126
Bst2UI CCWGG 3 cut(s) 64, 726, 1361
Bst4CI ACNGT 4 cut(s) 32, 745, 901, 1070
BstAPI GCANNNNNTGC 1 cut(s) 808
BstC8I GCNNGC 4 cut(s) 109, 176, 809, 865
BstDEI CTNAG 4 cut(s) 244, 372, 667, 699
BstDSI CCRYGG 1 cut(s) 314
BstENI CCTNNNNNAGG 1 cut(s) 371
BstFNI CGCG 1 cut(s) 1175
BstHHI GCGC 1 cut(s) 860
BstKTI GATC 6 cut(s) 462, 889, 955, 1044, 1198, 1231
BstMAI GTCTC 1 cut(s) 723
BstMBI GATC 6 cut(s) 459, 886, 952, 1041, 1195, 1228
BstMWI GCNNNNNNNGC 5 cut(s) 184, 403, 808, 864, 1292
BstNI CCWGG 3 cut(s) 64, 726, 1361
BstNSI RCATGY 3 cut(s) 262, 623, 811
BstSCI CCNGG 3 cut(s) 62, 724, 1359
BstSFI CTRYAG 3 cut(s) 105, 212, 945
BstUI CGCG 1 cut(s) 1175
BstV1I GCAGC 2 cut(s) 670, 872
BstV2I GAAGAC 1 cut(s) 435
BstZ17I GTATAC 1 cut(s) 1126
BsuRI GGCC 2 cut(s) 924, 1163
BtgI CCRYGG 1 cut(s) 314
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 2 cut(s) 304, 906
Cac8I GCNNGC 4 cut(s) 109, 176, 809, 865
CciI TCATGA 3 cut(s) 763, 955, 1156
CfoI GCGC 1 cut(s) 860
Cfr13I GGNCC 1 cut(s) 1255
CseI GACGC 1 cut(s) 429
CsiI ACCWGGT 1 cut(s) 62
Csp6I GTAC 4 cut(s) 237, 323, 814, 1187
CspCI CAANNNNNGTGG 2 cut(s) 882, 917
CviQI GTAC 4 cut(s) 237, 323, 814, 1187
DdeI CTNAG 4 cut(s) 244, 372, 667, 699
DpnI GATC 6 cut(s) 461, 888, 954, 1043, 1197, 1230
DpnII GATC 6 cut(s) 459, 886, 952, 1041, 1195, 1228
DriI GACNNNNNGTC 1 cut(s) 1141
EaeI YGGCCR 1 cut(s) 922
Eam1105I GACNNNNNGTC 1 cut(s) 1141
Ecl136II GAGCTC 1 cut(s) 397
Eco130I CCWWGG 2 cut(s) 249, 314
Eco24I GRGCYC 2 cut(s) 399, 523
Eco32I GATATC 1 cut(s) 292
Eco47I GGWCC 1 cut(s) 1255
Eco53kI GAGCTC 1 cut(s) 397
Eco57I CTGAAG 1 cut(s) 1200
Eco88I CYCGRG 1 cut(s) 1139
EcoICRI GAGCTC 1 cut(s) 397
EcoNI CCTNNNNNAGG 1 cut(s) 371
EcoRII CCWGG 3 cut(s) 62, 724, 1359
EcoRV GATATC 1 cut(s) 292
EcoT14I CCWWGG 2 cut(s) 249, 314
EcoT22I ATGCAT 1 cut(s) 677
EcoT38I GRGCYC 2 cut(s) 399, 523
ErhI CCWWGG 2 cut(s) 249, 314
FaqI GGGAC 1 cut(s) 54
FbaI TGATCA 3 cut(s) 459, 886, 1228
FblI GTMKAC 1 cut(s) 1125
Fnu4HI GCNGC 2 cut(s) 684, 861
FriOI GRGCYC 2 cut(s) 399, 523
Fsp4HI GCNGC 2 cut(s) 684, 861
FspBI CTAG 4 cut(s) 516, 575, 654, 1205
GlaI GCGC 1 cut(s) 859
GluI GCNGC 2 cut(s) 684, 861
GsuI CTGGAG 2 cut(s) 747, 900
HaeIII GGCC 2 cut(s) 924, 1163
HgaI GACGC 1 cut(s) 429
HhaI GCGC 1 cut(s) 860
Hin6I GCGC 1 cut(s) 858
HinP1I GCGC 1 cut(s) 858
HphI GGTGA 2 cut(s) 389, 1183
Hpy166II GTNNAC 7 cut(s) 60, 239, 272, 325, 388, 840, 1126
Hpy188III TCNNGA 8 cut(s) 127, 400, 516, 764, 879, 956, 1064, 1157
Hpy8I GTNNAC 7 cut(s) 60, 239, 272, 325, 388, 840, 1126
Hpy99I CGWCG 1 cut(s) 143
HpyAV CCTTC 3 cut(s) 85, 546, 697
HpyCH4III ACNGT 4 cut(s) 32, 745, 901, 1070
HpyCH4IV ACGT 1 cut(s) 1223
HpyCH4V TGCA 6 cut(s) 107, 135, 258, 675, 720, 1265
HpyF10VI GCNNNNNNNGC 5 cut(s) 184, 403, 808, 864, 1292
HpyF3I CTNAG 4 cut(s) 244, 372, 667, 699
HpySE526I ACGT 1 cut(s) 1223
HspAI GCGC 1 cut(s) 858
Ksp22I TGATCA 3 cut(s) 459, 886, 1228
Kzo9I GATC 6 cut(s) 459, 886, 952, 1041, 1195, 1228
LmnI GCTCC 3 cut(s) 307, 394, 402
Lsp1109I GCAGC 2 cut(s) 670, 872
LweI GCATC 3 cut(s) 861, 876, 1041
MabI ACCWGGT 1 cut(s) 62
MaeI CTAG 4 cut(s) 516, 575, 654, 1205
MaeII ACGT 1 cut(s) 1223
MaeIII GTNAC 3 cut(s) 32, 634, 983
MalI GATC 6 cut(s) 461, 888, 954, 1043, 1197, 1230
MboI GATC 6 cut(s) 459, 886, 952, 1041, 1195, 1228
MboII GAAGA 3 cut(s) 435, 962, 1206
MhlI GDGCHC 3 cut(s) 304, 399, 523
MlsI TGGCCA 1 cut(s) 924
MluNI TGGCCA 1 cut(s) 924
MlyI GAGTC 4 cut(s) 770, 845, 1094, 1151
MmeI TCCRAC 2 cut(s) 595, 1068
Mox20I TGGCCA 1 cut(s) 924
Mph1103I ATGCAT 1 cut(s) 677
MroXI GAANNNNTTC 1 cut(s) 407
MscI TGGCCA 1 cut(s) 924
MseI TTAA 5 cut(s) 227, 353, 542, 872, 977
Msp20I TGGCCA 1 cut(s) 924
MspA1I CMGCKG 1 cut(s) 54
MspR9I CCNGG 3 cut(s) 64, 726, 1361
Mva1269I GAATGC 3 cut(s) 588, 598, 677
MvaI CCWGG 3 cut(s) 64, 726, 1361
MvnI CGCG 1 cut(s) 1175
MwoI GCNNNNNNNGC 5 cut(s) 184, 403, 808, 864, 1292
NcoI CCATGG 1 cut(s) 314
NdeII GATC 6 cut(s) 459, 886, 952, 1041, 1195, 1228
NmeAIII GCCGAG 1 cut(s) 649
NmuCI GTSAC 1 cut(s) 983
NsiI ATGCAT 1 cut(s) 677
NspI RCATGY 3 cut(s) 262, 623, 811
PaeI GCATGC 1 cut(s) 811
PaeR7I CTCGAG 1 cut(s) 1139
PagI TCATGA 3 cut(s) 763, 955, 1156
PcsI WCGNNNNNNNCGW 1 cut(s) 1062
PctI GAATGC 3 cut(s) 588, 598, 677
PdmI GAANNNNTTC 1 cut(s) 407
PfeI GAWTC 6 cut(s) 208, 408, 760, 1007, 1058, 1343
PkrI GCNGC 2 cut(s) 685, 862
PleI GAGTC 4 cut(s) 770, 844, 1093, 1150
PpsI GAGTC 4 cut(s) 770, 844, 1093, 1150
Psp124BI GAGCTC 1 cut(s) 399
Psp6I CCWGG 3 cut(s) 62, 724, 1359
PspGI CCWGG 3 cut(s) 62, 724, 1359
PspPI GGNCC 1 cut(s) 1255
PspXI VCTCGAGB 1 cut(s) 1139
PstI CTGCAG 1 cut(s) 109
RsaI GTAC 4 cut(s) 238, 324, 815, 1188
RsaNI GTAC 4 cut(s) 237, 323, 814, 1187
SacI GAGCTC 1 cut(s) 399
SaqAI TTAA 5 cut(s) 227, 353, 542, 872, 977
SatI GCNGC 2 cut(s) 684, 861
Sau3AI GATC 6 cut(s) 459, 886, 952, 1041, 1195, 1228
Sau96I GGNCC 1 cut(s) 1255
SchI GAGTC 4 cut(s) 770, 845, 1094, 1151
ScrFI CCNGG 3 cut(s) 64, 726, 1361
SduI GDGCHC 3 cut(s) 304, 399, 523
SexAI ACCWGGT 1 cut(s) 62
SfaNI GCATC 3 cut(s) 861, 876, 1041
SfcI CTRYAG 3 cut(s) 105, 212, 945
Sfr274I CTCGAG 1 cut(s) 1139
SinI GGWCC 1 cut(s) 1255
SlaI CTCGAG 1 cut(s) 1139
SmlI CTYRAG 1 cut(s) 1139
SmoI CTYRAG 1 cut(s) 1139
SphI GCATGC 1 cut(s) 811
SsiI CCGC 5 cut(s) 52, 185, 295, 305, 1173
SspI AATATT 1 cut(s) 1351
SspMI CTAG 4 cut(s) 516, 575, 654, 1205
SstI GAGCTC 1 cut(s) 399
StyD4I CCNGG 3 cut(s) 62, 724, 1359
StyI CCWWGG 2 cut(s) 249, 314
TaaI ACNGT 4 cut(s) 32, 745, 901, 1070
TaiI ACGT 1 cut(s) 1226
TaqI TCGA 6 cut(s) 126, 436, 483, 1056, 1065, 1140
TatI WGTACW 2 cut(s) 322, 1186
TfiI GAWTC 6 cut(s) 208, 408, 760, 1007, 1058, 1343
Tru1I TTAA 5 cut(s) 227, 353, 542, 872, 977
Tru9I TTAA 5 cut(s) 227, 353, 542, 872, 977
TscAI CASTG 2 cut(s) 304, 906
TseFI GTSAC 1 cut(s) 983
TseI GCWGC 2 cut(s) 683, 860
Tsp45I GTSAC 1 cut(s) 983
TspDTI ATGAA 4 cut(s) 105, 1145, 1309, 1356
TspGWI ACGGA 1 cut(s) 831
TspRI CASTG 2 cut(s) 304, 906
VpaK11BI GGWCC 1 cut(s) 1255
XagI CCTNNNNNAGG 1 cut(s) 371
XapI RAATTY 2 cut(s) 628, 1032
XbaI TCTAGA 1 cut(s) 515
XceI RCATGY 3 cut(s) 262, 623, 811
XcmI CCANNNNNNNNNTGG 1 cut(s) 932
XhoI CTCGAG 1 cut(s) 1139
XmiI GTMKAC 1 cut(s) 1125
XmnI GAANNNNTTC 1 cut(s) 407
XspI CTAG 4 cut(s) 516, 575, 654, 1205
Zsp2I ATGCAT 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.