FvH4_2g03062

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000144
Physical Location & Seq
Forward (+)
2356271 .. 2360014
3744 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g03062.t1

Sequence Viewer

Length: 2097 bp
ATGACCGAGGGGGCTCTTTTTTTGACATATAGTAACATAAGACACTGCCTATCATTTACCAAATTTCTTTACTTGAACTTGAAGAAACTACTTGATTACAAGAGAGAGCAGAAGTCCATCAGCCAAAGTAATGATTATGATTATGGATGCTGGCAGGAACCACCTAATGAAATCTTAGAGAAAATTGTACAGAATCTGAGGTTAAGTGACCGAATACGCTCGGGCATCGTTTGCAAGTCTTGGAGGTCAGTTATTATGTGTAGTATTCCCTCACATGAGTTCCCCTGGTTAGTACTTCCTCAATCCCCGGATTGCAGGAATGACAAAACCCTAAGCTTTTTCAGCATCTCCGATGGCAAAGTTGTGGATTTGAAGCTACCCAGGCAAGTTCAAGGAGGATGGTTTTATGGATCTTCCAAAGGTTGGCTGATAATGATTAAGGAACAAGGACTAAACACTCAGATATCTCTACTCAATCCAATATCAGGAGCCCTACACCAACTTCCATCCTTGGCAACTGTTCCATCCTTTCAAAATTATGTACAAGAGAAAAATTGGAAACTTTACGGTGGCTCCCTATTCTTTCATCAAATTGTGTTATCTACCTCAAATATTAATTCAGATCAATGCGTGGTAGCAGCAAGTTTTGACTCTTGCCGTGAACTGGCGTTGTGCAGACCTGGAGGCAAAACATGGAGTGTCTTTCGTCCATTTGAGCACAAACATGAGACCGTGGCCCAATTATTATTTTCCAGTGGTAAGCTATATGCCATGATTGGTGGTAAGATTAAGAAGGAAGGTATTATAGCTCGAACCTTAAGATTTGGAGATCATGCACTGGAACTGACGATGGTCTATGTTGGTGTAATCGAACTACCAATATGGGAGACTAAGGAGTACCATGACCACGCGGTCTACTTGCAATGTTTGTGTAGCCCATTCTTGCTAGAATCAACCAAAAATGAAGTGTTATTGATCCAGAAAATCGAAGACTATTTTATAAAGGTAAATAACGATCCCGATCAGGACGAGGAAGCAGATATTCTTGAAGGCGAGGATGATGATGAAGGCAATGACATGGAAGAAGAAGGCAATTTTGATGAAGGTGATGAGAACTACAATGATAATGATGCTGATGATGTTGAAGGTAATGAAGAGGATGATGAAGAAGGTGAGTATCATAATGAAATAGAGGATTGGGACTGGGACGAGTCTATCTATACGAGGACAAGCACCTTTAAAGTATACAAGATCGATTCCAAGACTGACCCAAACAATTTTCTTAGGTTACAAAGTTTGGGAGAGCAGACGTTTTTCTTGGCTGAGCACGGTTCTTTGTCTCTCTCAGCTTCAAATATGAAAGAATTCGAAAAGAATTGCATTTATTTTGCAACAAAGGCAACAACGAGAGATGTGCTTCCAAAACCACAAATATCTCGCGAGATTGGTGTCTTCTACTTAGACACTGGCTTCAAGAGTTTGAAGAATCTTGATATTCAGCATGTTTACTTGACTCAAGATTTATTGGACACTTTAGTTGGTTACAGCCCTCTGCTTGAGAGATTGACATTGTGTAATTGTGATGGATTCACCAATCTCCAGGTTAATGCACCAAATCTCCAATTCATTAACGCCTTAGGTTCTTTTGAGGATGTTAAACTTGAGAACACCTTACATCTTGCTGATGTCTCGATCGATTTGACGAGTAATGCTGACCCAAAATGGGTTTCTGGCAGTACATCTAGCAATTTGCTCAGGTGTTTTGATAATGTGCCTCACATTCAAAGGCTCACAATTGGGAGTTGCTTTCTAAAGTATCTTGCGGTTGGTACCTTGCCAGAAAAGTTGCCGAAAGCATTCGTGAGACTAAGTTTTATTTCTGTACACCTAAGCTTCAAAAATTTGAACGAGATTTTGGCTATCCTATGCCTTCTGAGAAGCTCCCCAAGTCTTCAAGAGCTACACATCTCGGCCAACCAAAATCACCAAGCTGTTATGGGAGAATTGAACTCTTCGTTAGGTGACTATGAAAGTTACACATACAACCAACTACGACTTGTGAATATATCCAACATCGCTGCAGATTTCTGCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

699

Amino Acids

79.41

Weight (kDa)

4.87

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 113 - 485 1.2e-36 KIB1-4 beta-propeller
LRR_At5g56370 PF24758 490 - 656 5e-10 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 491 - 691 2e-07 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1001
AasI GACNNNNNNGTC 1 cut(s) 911
Acc65I GGTACC 1 cut(s) 1829
AccB1I GGYRCC 1 cut(s) 1829
AccB7I CCANNNNNTGG 1 cut(s) 423
AccI GTMKAC 2 cut(s) 915, 1245
AccII CGCG 2 cut(s) 911, 1440
AciI CCGC 2 cut(s) 911, 1823
AclWI GGATC 3 cut(s) 418, 970, 1010
AcoI YGGCCR 1 cut(s) 1971
AcsI RAATTY 3 cut(s) 62, 1364, 1900
AfaI GTAC 7 cut(s) 189, 294, 543, 899, 1738, 1831, 1884
AfiI CCNNNNNNNGG 4 cut(s) 423, 485, 664, 1723
AflII CTTAAG 1 cut(s) 817
AjnI CCWGG 4 cut(s) 284, 380, 679, 1599
AjuI GAANNNNNNNTTGG 4 cut(s) 1711, 1743, 1898, 1930
AluBI AGCT 9 cut(s) 336, 376, 763, 809, 1349, 1893, 1941, 1960, 1991
AluI AGCT 9 cut(s) 336, 376, 763, 809, 1349, 1893, 1941, 1960, 1991
Alw21I GWGCWC 2 cut(s) 720, 1329
Alw26I GTCTC 5 cut(s) 722, 881, 1344, 1693, 1858
AlwI GGATC 3 cut(s) 418, 970, 1010
AlwNI CAGNNNCTG 1 cut(s) 196
Ama87I CYCGRG 1 cut(s) 220
AoxI GGCC 2 cut(s) 735, 1971
ApeKI GCWGC 2 cut(s) 638, 2078
ApoI RAATTY 3 cut(s) 62, 1364, 1900
AseI ATTAAT 1 cut(s) 615
Asp700I GAANNNNTTC 2 cut(s) 1364, 1856
Asp718I GGTACC 1 cut(s) 1829
AspS9I GGNCC 1 cut(s) 736
AsuC2I CCSGG 1 cut(s) 308
AsuHPI GGTGA 5 cut(s) 1118, 1184, 1582, 1976, 2033
AsuII TTCGAA 1 cut(s) 1368
AvaI CYCGRG 1 cut(s) 220
AxyI CCTNAGG 1 cut(s) 1636
BanI GGYRCC 1 cut(s) 1829
BanII GRGCYC 2 cut(s) 16, 493
BbsI GAAGAC 3 cut(s) 996, 1444, 1943
Bbv12I GWGCWC 2 cut(s) 720, 1329
BbvI GCAGC 2 cut(s) 650, 2065
BccI CCATC 7 cut(s) 125, 347, 393, 514, 532, 844, 1577
BceAI ACGGC 1 cut(s) 642
BcgI CGANNNNNNTGC 2 cut(s) 1396, 1430
BciT130I CCWGG 4 cut(s) 286, 382, 681, 1601
BcnI CCSGG 1 cut(s) 308
BcoDI GTCTC 5 cut(s) 722, 881, 1344, 1693, 1858
BfaI CTAG 2 cut(s) 947, 1743
BfmI CTRYAG 1 cut(s) 2079
BfrI CTTAAG 1 cut(s) 817
BisI GCNGC 2 cut(s) 639, 2079
BlpI GCTNAGC 1 cut(s) 1323
BlsI GCNGC 2 cut(s) 640, 2080
BmcAI AGTACT 1 cut(s) 294
Bme1390I CCNGG 5 cut(s) 286, 308, 382, 681, 1601
BmeT110I CYCGRG 1 cut(s) 220
BmgT120I GGNCC 1 cut(s) 736
BmiI GGNNCC 4 cut(s) 159, 490, 574, 1831
BmrFI CCNGG 5 cut(s) 286, 308, 382, 681, 1601
BmrI ACTGGG 1 cut(s) 1213
BmsI GCATC 4 cut(s) 137, 234, 354, 1120
BmuI ACTGGG 1 cut(s) 1213
BoxI GACNNNNGTC 1 cut(s) 851
BpiI GAAGAC 3 cut(s) 996, 1444, 1943
BpmI CTGGAG 2 cut(s) 702, 1583
Bpu10I CCTNAGC 3 cut(s) 332, 1754, 1889
Bpu1102I GCTNAGC 1 cut(s) 1323
Bpu14I TTCGAA 1 cut(s) 1368
BpuEI CTTGAG 3 cut(s) 1500, 1577, 1682
BpuMI CCSGG 1 cut(s) 308
Bsa29I ATCGAT 2 cut(s) 1254, 1695
BsaBI GATNNNNATC 1 cut(s) 1020
BsaI GGTCTC 1 cut(s) 722
BsaJI CCNNGG 6 cut(s) 6, 284, 306, 380, 510, 732
BsaXI ACNNNNNCTCC 4 cut(s) 557, 587, 1602, 1632
Bsc4I CCNNNNNNNGG 4 cut(s) 423, 485, 664, 1723
Bse1I ACTGG 5 cut(s) 669, 753, 843, 1208, 1471
Bse21I CCTNAGG 1 cut(s) 1636
Bse3DI GCAATG 2 cut(s) 929, 1078
Bse8I GATNNNNATC 1 cut(s) 1020
BseBI CCWGG 4 cut(s) 286, 382, 681, 1601
BseCI ATCGAT 2 cut(s) 1254, 1695
BseDI CCNNGG 6 cut(s) 6, 284, 306, 380, 510, 732
BseGI GGATG 7 cut(s) 152, 404, 506, 524, 1063, 1165, 1657
BseJI GATNNNNATC 1 cut(s) 1020
BseLI CCNNNNNNNGG 4 cut(s) 423, 485, 664, 1723
BseMI GCAATG 2 cut(s) 929, 1078
BseMII CTCAG 6 cut(s) 188, 473, 1314, 1359, 1768, 1925
BseNI ACTGG 5 cut(s) 669, 753, 843, 1208, 1471
BseXI GCAGC 2 cut(s) 650, 2065
BsgI GTGCAG 1 cut(s) 694
Bsh1236I CGCG 2 cut(s) 911, 1440
Bsh1285I CGRYCG 1 cut(s) 1695
BshFI GGCC 2 cut(s) 737, 1973
BshNI GGYRCC 1 cut(s) 1829
BshVI ATCGAT 2 cut(s) 1254, 1695
BsiEI CGRYCG 1 cut(s) 1695
BsiHKAI GWGCWC 2 cut(s) 720, 1329
BsiHKCI CYCGRG 1 cut(s) 220
BsiSI CCGG 1 cut(s) 308
BslFI GGGAC 2 cut(s) 1214, 1220
BslI CCNNNNNNNGG 4 cut(s) 423, 485, 664, 1723
BsmAI GTCTC 5 cut(s) 722, 881, 1344, 1693, 1858
BsmFI GGGAC 2 cut(s) 1214, 1220
BsmI GAATGC 1 cut(s) 1856
BsnI GGCC 2 cut(s) 737, 1973
Bso31I GGTCTC 1 cut(s) 722
BsoBI CYCGRG 1 cut(s) 220
Bsp119I TTCGAA 1 cut(s) 1368
Bsp1286I GDGCHC 4 cut(s) 16, 493, 720, 1329
Bsp1407I TGTACA 3 cut(s) 187, 541, 1882
Bsp143I GATC 8 cut(s) 410, 622, 829, 975, 1015, 1021, 1251, 1692
Bsp1720I GCTNAGC 1 cut(s) 1323
Bsp68I TCGCGA 1 cut(s) 1440
BspACI CCGC 2 cut(s) 911, 1823
BspANI GGCC 2 cut(s) 737, 1973
BspCNI CTCAG 6 cut(s) 189, 472, 1315, 1358, 1767, 1926
BspDI ATCGAT 2 cut(s) 1254, 1695
BspFNI CGCG 2 cut(s) 911, 1440
BspLI GGNNCC 4 cut(s) 159, 490, 574, 1831
BspMAI CTGCAG 1 cut(s) 2083
BspPI GGATC 3 cut(s) 418, 970, 1010
BspT104I TTCGAA 1 cut(s) 1368
BspT107I GGYRCC 1 cut(s) 1829
BspTI CTTAAG 1 cut(s) 817
BspTNI GGTCTC 1 cut(s) 722
BsrDI GCAATG 2 cut(s) 929, 1078
BsrGI TGTACA 3 cut(s) 187, 541, 1882
BsrI ACTGG 5 cut(s) 669, 753, 843, 1208, 1471
BssECI CCNNGG 6 cut(s) 6, 284, 306, 380, 510, 732
BssMI GATC 8 cut(s) 410, 622, 829, 975, 1015, 1021, 1251, 1692
BssNAI GTATAC 1 cut(s) 1246
BssT1I CCWWGG 1 cut(s) 510
Bst1107I GTATAC 1 cut(s) 1246
Bst2UI CCWGG 4 cut(s) 286, 382, 681, 1601
Bst4CI ACNGT 4 cut(s) 520, 569, 733, 1331
Bst6I CTCTTC 2 cut(s) 1149, 2017
BstAFI CTTAAG 1 cut(s) 817
BstAPI GCANNNNNTGC 1 cut(s) 231
BstAUI TGTACA 3 cut(s) 187, 541, 1882
BstBI TTCGAA 1 cut(s) 1368
BstC8I GCNNGC 1 cut(s) 152
BstDSI CCRYGG 1 cut(s) 732
BstF5I GGATG 7 cut(s) 152, 404, 506, 524, 1063, 1165, 1657
BstFNI CGCG 2 cut(s) 911, 1440
BstKTI GATC 8 cut(s) 413, 625, 832, 978, 1018, 1024, 1254, 1695
BstMAI GTCTC 5 cut(s) 722, 881, 1344, 1693, 1858
BstMBI GATC 8 cut(s) 410, 622, 829, 975, 1015, 1021, 1251, 1692
BstMCI CGRYCG 1 cut(s) 1695
BstMWI GCNNNNNNNGC 4 cut(s) 231, 342, 382, 1397
BstNI CCWGG 4 cut(s) 286, 382, 681, 1601
BstNSI RCATGY 1 cut(s) 1505
BstPAI GACNNNNGTC 1 cut(s) 851
BstSCI CCNGG 5 cut(s) 284, 306, 380, 679, 1599
BstSFI CTRYAG 1 cut(s) 2079
BstUI CGCG 2 cut(s) 911, 1440
BstV1I GCAGC 2 cut(s) 650, 2065
BstV2I GAAGAC 3 cut(s) 996, 1444, 1943
BstX2I RGATCY 1 cut(s) 410
BstYI RGATCY 1 cut(s) 410
BstZ17I GTATAC 1 cut(s) 1246
Bsu15I ATCGAT 2 cut(s) 1254, 1695
Bsu36I CCTNAGG 1 cut(s) 1636
BsuRI GGCC 2 cut(s) 737, 1973
BsuTUI ATCGAT 2 cut(s) 1254, 1695
BtgI CCRYGG 1 cut(s) 732
BtgZI GCGATG 1 cut(s) 2059
BtsCI GGATG 7 cut(s) 152, 404, 506, 524, 1063, 1165, 1657
BtsI GCAGTG 1 cut(s) 43
BtsIMutI CAGTG 4 cut(s) 43, 760, 836, 1464
BtuMI TCGCGA 1 cut(s) 1440
Cac8I GCNNGC 1 cut(s) 152
CaiI CAGNNNCTG 1 cut(s) 196
Cfr13I GGNCC 1 cut(s) 736
ClaI ATCGAT 2 cut(s) 1254, 1695
Csp6I GTAC 7 cut(s) 188, 293, 542, 898, 1737, 1830, 1883
CviAII CATG 8 cut(s) 275, 693, 725, 772, 833, 902, 1078, 1502
CviQI GTAC 7 cut(s) 188, 293, 542, 898, 1737, 1830, 1883
DpnI GATC 8 cut(s) 412, 624, 831, 977, 1017, 1023, 1253, 1694
DpnII GATC 8 cut(s) 410, 622, 829, 975, 1015, 1021, 1251, 1692
DraI TTTAAA 1 cut(s) 1240
DrdI GACNNNNNNGTC 1 cut(s) 911
DseDI GACNNNNNNGTC 1 cut(s) 911
EaeI YGGCCR 1 cut(s) 1971
Eam1104I CTCTTC 2 cut(s) 1149, 2017
EarI CTCTTC 2 cut(s) 1149, 2017
Eco130I CCWWGG 1 cut(s) 510
Eco24I GRGCYC 2 cut(s) 16, 493
Eco31I GGTCTC 1 cut(s) 722
Eco32I GATATC 1 cut(s) 465
Eco81I CCTNAGG 1 cut(s) 1636
Eco88I CYCGRG 1 cut(s) 220
EcoRI GAATTC 1 cut(s) 1364
EcoRII CCWGG 4 cut(s) 284, 380, 679, 1599
EcoRV GATATC 1 cut(s) 465
EcoT14I CCWWGG 1 cut(s) 510
EcoT38I GRGCYC 2 cut(s) 16, 493
ErhI CCWWGG 1 cut(s) 510
FaeI CATG 8 cut(s) 278, 696, 728, 775, 836, 905, 1081, 1505
FaqI GGGAC 2 cut(s) 1214, 1220
FatI CATG 8 cut(s) 274, 692, 724, 771, 832, 901, 1077, 1501
FblI GTMKAC 2 cut(s) 915, 1245
Fnu4HI GCNGC 2 cut(s) 639, 2079
FokI GGATG 7 cut(s) 159, 411, 493, 511, 1070, 1172, 1664
FriOI GRGCYC 2 cut(s) 16, 493
Fsp4HI GCNGC 2 cut(s) 639, 2079
FspBI CTAG 2 cut(s) 947, 1743
GluI GCNGC 2 cut(s) 639, 2079
GsuI CTGGAG 2 cut(s) 702, 1583
HaeIII GGCC 2 cut(s) 737, 1973
HapII CCGG 1 cut(s) 308
Hin1II CATG 8 cut(s) 278, 696, 728, 775, 836, 905, 1081, 1505
HindIII AAGCTT 2 cut(s) 334, 1891
HinfI GANTC 8 cut(s) 193, 650, 950, 1211, 1256, 1486, 1513, 1587
HpaII CCGG 1 cut(s) 308
HphI GGTGA 5 cut(s) 1118, 1184, 1582, 1976, 2033
Hpy166II GTNNAC 5 cut(s) 662, 916, 1246, 1507, 1885
Hpy188I TCNGA 5 cut(s) 198, 352, 462, 622, 1935
Hpy8I GTNNAC 5 cut(s) 662, 916, 1246, 1507, 1885
HpyAV CCTTC 9 cut(s) 787, 791, 1043, 1061, 1082, 1097, 1139, 1163, 1940
HpyCH4III ACNGT 4 cut(s) 520, 569, 733, 1331
HpyCH4IV ACGT 1 cut(s) 1310
HpyCH4V TGCA 9 cut(s) 234, 315, 675, 836, 922, 1380, 1391, 1610, 2081
HpyF10VI GCNNNNNNNGC 4 cut(s) 231, 342, 382, 1397
HpySE526I ACGT 1 cut(s) 1310
Hsp92II CATG 8 cut(s) 278, 696, 728, 775, 836, 905, 1081, 1505
KpnI GGTACC 1 cut(s) 1833
Kzo9I GATC 8 cut(s) 410, 622, 829, 975, 1015, 1021, 1251, 1692
LmnI GCTCC 3 cut(s) 488, 578, 1946
Lsp1109I GCAGC 2 cut(s) 650, 2065
LweI GCATC 4 cut(s) 137, 234, 354, 1120
MaeI CTAG 2 cut(s) 947, 1743
MaeII ACGT 1 cut(s) 1310
MaeIII GTNAC 6 cut(s) 32, 206, 1287, 1541, 2021, 2033
MalI GATC 8 cut(s) 412, 624, 831, 977, 1017, 1023, 1253, 1694
MboI GATC 8 cut(s) 410, 622, 829, 975, 1015, 1021, 1251, 1692
MfeI CAATTG 1 cut(s) 1794
MflI RGATCY 1 cut(s) 410
MhlI GDGCHC 4 cut(s) 16, 493, 720, 1329
MlyI GAGTC 3 cut(s) 644, 1220, 1507
MmeI TCCRAC 1 cut(s) 2094
MroXI GAANNNNTTC 2 cut(s) 1364, 1856
MseI TTAA 9 cut(s) 203, 438, 615, 789, 818, 1239, 1605, 1629, 1656
MslI CAYNNNNRTG 1 cut(s) 723
MspCI CTTAAG 1 cut(s) 817
MspI CCGG 1 cut(s) 308
MspR9I CCNGG 5 cut(s) 286, 308, 382, 681, 1601
MunI CAATTG 1 cut(s) 1794
Mva1269I GAATGC 1 cut(s) 1856
MvaI CCWGG 4 cut(s) 286, 382, 681, 1601
MvnI CGCG 2 cut(s) 911, 1440
MwoI GCNNNNNNNGC 4 cut(s) 231, 342, 382, 1397
NciI CCSGG 1 cut(s) 308
NdeII GATC 8 cut(s) 410, 622, 829, 975, 1015, 1021, 1251, 1692
NlaIII CATG 8 cut(s) 278, 696, 728, 775, 836, 905, 1081, 1505
NlaIV GGNNCC 4 cut(s) 159, 490, 574, 1831
NmeAIII GCCGAG 1 cut(s) 1949
NmuCI GTSAC 2 cut(s) 206, 2021
NruI TCGCGA 1 cut(s) 1440
NspI RCATGY 1 cut(s) 1505
NspV TTCGAA 1 cut(s) 1368
PctI GAATGC 1 cut(s) 1856
PdmI GAANNNNTTC 2 cut(s) 1364, 1856
PfeI GAWTC 5 cut(s) 193, 950, 1256, 1486, 1587
PflMI CCANNNNNTGG 1 cut(s) 423
PkrI GCNGC 2 cut(s) 640, 2080
Ple19I CGATCG 1 cut(s) 1695
PleI GAGTC 3 cut(s) 644, 1219, 1507
PpsI GAGTC 3 cut(s) 644, 1219, 1507
PshAI GACNNNNGTC 1 cut(s) 851
PshBI ATTAAT 1 cut(s) 615
PsiI TTATAA 1 cut(s) 1001
Psp6I CCWGG 4 cut(s) 284, 380, 679, 1599
PspGI CCWGG 4 cut(s) 284, 380, 679, 1599
PspN4I GGNNCC 4 cut(s) 159, 490, 574, 1831
PspPI GGNCC 1 cut(s) 736
PstI CTGCAG 1 cut(s) 2083
PstNI CAGNNNCTG 1 cut(s) 196
PsuI RGATCY 1 cut(s) 410
PvuI CGATCG 1 cut(s) 1695
RruI TCGCGA 1 cut(s) 1440
RsaI GTAC 7 cut(s) 189, 294, 543, 899, 1738, 1831, 1884
RsaNI GTAC 7 cut(s) 188, 293, 542, 898, 1737, 1830, 1883
RseI CAYNNNNRTG 1 cut(s) 723
SaqAI TTAA 9 cut(s) 203, 438, 615, 789, 818, 1239, 1605, 1629, 1656
SatI GCNGC 2 cut(s) 639, 2079
Sau3AI GATC 8 cut(s) 410, 622, 829, 975, 1015, 1021, 1251, 1692
Sau96I GGNCC 1 cut(s) 736
ScaI AGTACT 1 cut(s) 294
SchI GAGTC 3 cut(s) 644, 1220, 1507
ScrFI CCNGG 5 cut(s) 286, 308, 382, 681, 1601
SduI GDGCHC 4 cut(s) 16, 493, 720, 1329
SfaNI GCATC 4 cut(s) 137, 234, 354, 1120
SfcI CTRYAG 1 cut(s) 2079
SfuI TTCGAA 1 cut(s) 1368
SmiMI CAYNNNNRTG 1 cut(s) 723
SmlI CTYRAG 4 cut(s) 817, 1515, 1556, 1661
SmoI CTYRAG 4 cut(s) 817, 1515, 1556, 1661
SsiI CCGC 2 cut(s) 911, 1823
SspI AATATT 1 cut(s) 613
SspMI CTAG 2 cut(s) 947, 1743
StyD4I CCNGG 5 cut(s) 284, 306, 380, 679, 1599
StyI CCWWGG 1 cut(s) 510
TaaI ACNGT 4 cut(s) 520, 569, 733, 1331
TaiI ACGT 1 cut(s) 1313
TaqI TCGA 7 cut(s) 811, 870, 987, 1254, 1368, 1691, 1695
TaqII GACCGA 2 cut(s) 20, 225
TatI WGTACW 5 cut(s) 187, 292, 541, 1736, 1882
TfiI GAWTC 5 cut(s) 193, 950, 1256, 1486, 1587
Tru1I TTAA 9 cut(s) 203, 438, 615, 789, 818, 1239, 1605, 1629, 1656
Tru9I TTAA 9 cut(s) 203, 438, 615, 789, 818, 1239, 1605, 1629, 1656
TscAI CASTG 4 cut(s) 50, 760, 843, 1471
TseFI GTSAC 2 cut(s) 206, 2021
TseI GCWGC 2 cut(s) 638, 2078
Tsp45I GTSAC 2 cut(s) 206, 2021
TspRI CASTG 4 cut(s) 50, 760, 843, 1471
Van91I CCANNNNNTGG 1 cut(s) 423
Vha464I CTTAAG 1 cut(s) 817
VspI ATTAAT 1 cut(s) 615
XapI RAATTY 3 cut(s) 62, 1364, 1900
XceI RCATGY 1 cut(s) 1505
XmiI GTMKAC 2 cut(s) 915, 1245
XmnI GAANNNNTTC 2 cut(s) 1364, 1856
XspI CTAG 2 cut(s) 947, 1743
ZrmI AGTACT 1 cut(s) 294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.