FvH4_5g33621

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000144
Physical Location & Seq
Forward (+)
24348720 .. 24350561
1842 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33621.t1

Sequence Viewer

Length: 1152 bp
ATGATCATAGTGAAGGAACAAGAACTTGAATCTGCTATGTTCCTAGTAAACCCAATTTCAGGAGCTCTACAGAAACTTCCACCTTTCAAAACAATTCCATGTTTTCGGGAATTTATAAAAACGAGGGAATGGAAGCGTTCCGGCGCCAATGAATTCTGTCATCACATTGCGGTGGATAGTATTGATTCAAACAACTGGACAATGGCCGCAGCAGTTCTAAGCGATCATAAGACACTTGGATTGTGCAAACCAGGAGACAAAACATGGATTGTCTTCCAGGTAATAGATAATGATCAAGAAGATTGCCTTGTCGTTGATATATTGTTTTCTTGCGGGACTCTATATGTTTTGGTTGGTAGTCCTCAAAGGGACGATAAAGTCCATGCTACACAAACTTTAAAGTCCGGAGACAATGGCTTGGAAGTGAAATTGAAGTTGGTACTAGACAAGCATGAAATCTTGAACGGGAGCATTGATGAATATCATAGCGATTACGCGGTCGTGTACAATTCAACTTACCGCTCATGGTTATCAGAATCTACCAATAATGAAGTCTTGGTAATTCATCAAATGAATGGCTCCTTGATAGGATATGAAGGCAATCACGAGGATGATAACGCTGGCGGTAATGTTCATAATAATCAAGAATTCAACAATGGTGATGGCGGCCTCACTGTTGTTGACGAGTATGATGAAGACATCAATATTGAAGGCATCCATAATGTTGAAGAGATCTATGACGAGCACAATGGTGATGAGGAAGACATGCATCAAGATCATGATGATGGATATGATCATGTTGAAGACAACCAGCAGGATGGAGAACAAGTCGAGGATGAAGACGTTCCAGTTTTGATAACAAGTAGTTTCAGGGCATACAAGATCGACAAATGTAAGGACAAGCTTATGGGGTTGCAATGCTTGGGGGACCAATTGTTATTTTTAGGAGAAGGAGGCTCTTTTTCTCTTCCCGCTAATGATTTCCAAGAACTAGGAAAGAACTGCATTTATTTTGCAACACATTTTATTCAGGAAATTGGCAAATTCTATTTAGATCCTGGAAGCAATGGGGAAAGAAAATGGCCTGTTCTAGCTCCAAGTATCGTCACCCCCCTGCTATATAACCCTACATGGTTCATCCCATATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

384

Amino Acids

43.26

Weight (kDa)

4.46

Isoelectric Point (pI)

36.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 10 - 339 1.4e-19 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 116
AasI GACNNNNNNGTC 1 cut(s) 377
AccB1I GGYRCC 1 cut(s) 143
AccBSI CCGCTC 1 cut(s) 522
AccII CGCG 1 cut(s) 497
AccIII TCCGGA 1 cut(s) 404
AciI CCGC 8 cut(s) 170, 207, 333, 497, 520, 624, 666, 972
AclWI GGATC 1 cut(s) 1049
AcoI YGGCCR 1 cut(s) 204
AcsI RAATTY 4 cut(s) 110, 152, 647, 1043
AcyI GRCGYC 1 cut(s) 144
AfaI GTAC 2 cut(s) 441, 506
AfiI CCNNNNNNNGG 1 cut(s) 59
AjnI CCWGG 3 cut(s) 250, 276, 1057
AjuI GAANNNNNNNTTGG 2 cut(s) 419, 451
AleI CACNNNNGTG 1 cut(s) 750
AluBI AGCT 3 cut(s) 65, 904, 1094
AluI AGCT 3 cut(s) 65, 904, 1094
Alw21I GWGCWC 2 cut(s) 67, 747
Alw26I GTCTC 2 cut(s) 249, 402
AlwI GGATC 1 cut(s) 1049
Aor13HI TCCGGA 1 cut(s) 404
AoxI GGCC 3 cut(s) 204, 667, 1082
ApeKI GCWGC 1 cut(s) 209
ApoI RAATTY 4 cut(s) 110, 152, 647, 1043
Asp700I GAANNNNTTC 1 cut(s) 843
AspLEI GCGC 1 cut(s) 146
AspS9I GGNCC 1 cut(s) 928
AsuHPI GGTGA 3 cut(s) 671, 764, 1099
AvaII GGWCC 1 cut(s) 928
BanI GGYRCC 1 cut(s) 143
BanII GRGCYC 1 cut(s) 67
BauI CACGAG 1 cut(s) 605
BbsI GAAGAC 5 cut(s) 265, 702, 768, 810, 846
Bbv12I GWGCWC 2 cut(s) 67, 747
BbvI GCAGC 1 cut(s) 221
BccI CCATC 3 cut(s) 656, 779, 812
BciT130I CCWGG 3 cut(s) 252, 278, 1059
BclI TGATCA 3 cut(s) 3, 292, 793
BcoDI GTCTC 2 cut(s) 249, 402
BfaI CTAG 4 cut(s) 44, 443, 992, 1091
BfmI CTRYAG 1 cut(s) 68
BfoI RGCGCY 1 cut(s) 147
BglII AGATCT 1 cut(s) 732
BisI GCNGC 3 cut(s) 207, 210, 667
BlsI GCNGC 3 cut(s) 208, 211, 668
Bme1390I CCNGG 3 cut(s) 252, 278, 1059
Bme18I GGWCC 1 cut(s) 928
BmgT120I GGNCC 1 cut(s) 928
BmiI GGNNCC 3 cut(s) 145, 580, 929
BmrFI CCNGG 3 cut(s) 252, 278, 1059
BmsI GCATC 2 cut(s) 723, 778
BpiI GAAGAC 5 cut(s) 265, 702, 768, 810, 846
BsaBI GATNNNNATC 2 cut(s) 291, 480
BsaHI GRCGYC 1 cut(s) 144
BsaWI WCCGGW 1 cut(s) 404
BsaXI ACNNNNNCTCC 2 cut(s) 813, 843
Bsc4I CCNNNNNNNGG 1 cut(s) 59
Bse1I ACTGG 2 cut(s) 200, 848
Bse3DI GCAATG 3 cut(s) 165, 923, 1072
Bse8I GATNNNNATC 2 cut(s) 291, 480
BseAI TCCGGA 1 cut(s) 404
BseBI CCWGG 3 cut(s) 252, 278, 1059
BseGI GGATG 5 cut(s) 616, 714, 823, 841, 1137
BseJI GATNNNNATC 2 cut(s) 291, 480
BseLI CCNNNNNNNGG 1 cut(s) 59
BseMI GCAATG 3 cut(s) 165, 923, 1072
BseNI ACTGG 2 cut(s) 200, 848
BseXI GCAGC 1 cut(s) 221
Bsh1236I CGCG 1 cut(s) 497
Bsh1285I CGRYCG 1 cut(s) 501
BshFI GGCC 3 cut(s) 206, 669, 1084
BshNI GGYRCC 1 cut(s) 143
BsiEI CGRYCG 1 cut(s) 501
BsiHKAI GWGCWC 2 cut(s) 67, 747
BsiSI CCGG 2 cut(s) 141, 405
BslFI GGGAC 3 cut(s) 349, 383, 941
BslI CCNNNNNNNGG 1 cut(s) 59
BsmAI GTCTC 2 cut(s) 249, 402
BsmFI GGGAC 3 cut(s) 349, 383, 941
BsnI GGCC 3 cut(s) 206, 669, 1084
Bsp1286I GDGCHC 2 cut(s) 67, 747
Bsp13I TCCGGA 1 cut(s) 404
Bsp1407I TGTACA 1 cut(s) 504
Bsp143I GATC 8 cut(s) 3, 223, 292, 732, 775, 793, 882, 1054
BspACI CCGC 8 cut(s) 170, 207, 333, 497, 520, 624, 666, 972
BspANI GGCC 3 cut(s) 206, 669, 1084
BspEI TCCGGA 1 cut(s) 404
BspFNI CGCG 1 cut(s) 497
BspHI TCATGA 1 cut(s) 778
BspLI GGNNCC 3 cut(s) 145, 580, 929
BspPI GGATC 1 cut(s) 1049
BspT107I GGYRCC 1 cut(s) 143
BsrBI CCGCTC 1 cut(s) 522
BsrDI GCAATG 3 cut(s) 165, 923, 1072
BsrGI TGTACA 1 cut(s) 504
BsrI ACTGG 2 cut(s) 200, 848
BssMI GATC 8 cut(s) 3, 223, 292, 732, 775, 793, 882, 1054
BssNI GRCGYC 1 cut(s) 144
BssSI CACGAG 1 cut(s) 605
Bst2BI CACGAG 1 cut(s) 605
Bst2UI CCWGG 3 cut(s) 252, 278, 1059
Bst4CI ACNGT 1 cut(s) 676
Bst6I CTCTTC 2 cut(s) 723, 972
BstACI GRCGYC 1 cut(s) 144
BstAUI TGTACA 1 cut(s) 504
BstC8I GCNNGC 1 cut(s) 622
BstDEI CTNAG 1 cut(s) 218
BstF5I GGATG 5 cut(s) 616, 714, 823, 841, 1137
BstFNI CGCG 1 cut(s) 497
BstH2I RGCGCY 1 cut(s) 147
BstHHI GCGC 1 cut(s) 146
BstKTI GATC 8 cut(s) 6, 226, 295, 735, 778, 796, 885, 1057
BstMAI GTCTC 2 cut(s) 249, 402
BstMBI GATC 8 cut(s) 3, 223, 292, 732, 775, 793, 882, 1054
BstMCI CGRYCG 1 cut(s) 501
BstNI CCWGG 3 cut(s) 252, 278, 1059
BstNSI RCATGY 1 cut(s) 769
BstSCI CCNGG 3 cut(s) 250, 276, 1057
BstSFI CTRYAG 1 cut(s) 68
BstUI CGCG 1 cut(s) 497
BstV1I GCAGC 1 cut(s) 221
BstV2I GAAGAC 5 cut(s) 265, 702, 768, 810, 846
BstX2I RGATCY 2 cut(s) 732, 1054
BstXI CCANNNNNNTGG 1 cut(s) 818
BstYI RGATCY 2 cut(s) 732, 1054
BsuRI GGCC 3 cut(s) 206, 669, 1084
BtsCI GGATG 5 cut(s) 616, 714, 823, 841, 1137
BtsIMutI CAGTG 1 cut(s) 672
Cac8I GCNNGC 1 cut(s) 622
CciI TCATGA 1 cut(s) 778
CfoI GCGC 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 928
Csp6I GTAC 2 cut(s) 440, 505
CviAII CATG 9 cut(s) 99, 264, 383, 452, 525, 766, 779, 797, 1131
CviJI RGCY 9 cut(s) 65, 206, 417, 579, 669, 904, 957, 1084, 1094
CviKI_1 RGCY 9 cut(s) 65, 206, 417, 579, 669, 904, 957, 1084, 1094
CviQI GTAC 2 cut(s) 440, 505
DdeI CTNAG 1 cut(s) 218
DinI GGCGCC 1 cut(s) 145
DpnI GATC 8 cut(s) 5, 225, 294, 734, 777, 795, 884, 1056
DpnII GATC 8 cut(s) 3, 223, 292, 732, 775, 793, 882, 1054
DraI TTTAAA 1 cut(s) 399
DrdI GACNNNNNNGTC 1 cut(s) 377
DseDI GACNNNNNNGTC 1 cut(s) 377
EaeI YGGCCR 1 cut(s) 204
Eam1104I CTCTTC 2 cut(s) 723, 972
EarI CTCTTC 2 cut(s) 723, 972
Ecl136II GAGCTC 1 cut(s) 65
Eco24I GRGCYC 1 cut(s) 67
Eco47I GGWCC 1 cut(s) 928
Eco53kI GAGCTC 1 cut(s) 65
EcoICRI GAGCTC 1 cut(s) 65
EcoRI GAATTC 2 cut(s) 152, 647
EcoRII CCWGG 3 cut(s) 250, 276, 1057
EcoT22I ATGCAT 1 cut(s) 771
EcoT38I GRGCYC 1 cut(s) 67
EgeI GGCGCC 1 cut(s) 145
EheI GGCGCC 1 cut(s) 145
FaeI CATG 9 cut(s) 102, 267, 386, 455, 528, 769, 782, 800, 1134
FalI AAGNNNNNCTT 2 cut(s) 291, 323
FaqI GGGAC 3 cut(s) 349, 383, 941
FatI CATG 9 cut(s) 98, 263, 382, 451, 524, 765, 778, 796, 1130
FauI CCCGC 2 cut(s) 326, 979
FbaI TGATCA 3 cut(s) 3, 292, 793
Fnu4HI GCNGC 3 cut(s) 207, 210, 667
FokI GGATG 5 cut(s) 623, 701, 830, 848, 1124
FriOI GRGCYC 1 cut(s) 67
Fsp4HI GCNGC 3 cut(s) 207, 210, 667
FspBI CTAG 4 cut(s) 44, 443, 992, 1091
GlaI GCGC 1 cut(s) 145
GluI GCNGC 3 cut(s) 207, 210, 667
HaeII RGCGCY 1 cut(s) 147
HaeIII GGCC 3 cut(s) 206, 669, 1084
HapII CCGG 2 cut(s) 141, 405
HhaI GCGC 1 cut(s) 146
Hin1I GRCGYC 1 cut(s) 144
Hin1II CATG 9 cut(s) 102, 267, 386, 455, 528, 769, 782, 800, 1134
Hin6I GCGC 1 cut(s) 144
HinP1I GCGC 1 cut(s) 144
HincII GTYRAC 1 cut(s) 682
HindII GTYRAC 1 cut(s) 682
HindIII AAGCTT 1 cut(s) 902
HinfI GANTC 4 cut(s) 29, 185, 337, 536
HpaII CCGG 2 cut(s) 141, 405
HphI GGTGA 3 cut(s) 671, 764, 1099
Hpy166II GTNNAC 3 cut(s) 49, 505, 682
Hpy188I TCNGA 1 cut(s) 535
Hpy8I GTNNAC 3 cut(s) 49, 505, 682
HpyAV CCTTC 4 cut(s) 7, 590, 704, 944
HpyCH4III ACNGT 1 cut(s) 676
HpyCH4IV ACGT 1 cut(s) 843
HpyCH4V TGCA 5 cut(s) 246, 769, 916, 1005, 1016
HpyF3I CTNAG 1 cut(s) 218
HpySE526I ACGT 1 cut(s) 843
Hsp92I GRCGYC 1 cut(s) 144
Hsp92II CATG 9 cut(s) 102, 267, 386, 455, 528, 769, 782, 800, 1134
HspAI GCGC 1 cut(s) 144
KasI GGCGCC 1 cut(s) 143
Kpn2I TCCGGA 1 cut(s) 404
Ksp22I TGATCA 3 cut(s) 3, 292, 793
Kzo9I GATC 8 cut(s) 3, 223, 292, 732, 775, 793, 882, 1054
LmnI GCTCC 4 cut(s) 62, 468, 584, 1099
Lsp1109I GCAGC 1 cut(s) 221
LweI GCATC 2 cut(s) 723, 778
MaeI CTAG 4 cut(s) 44, 443, 992, 1091
MaeII ACGT 1 cut(s) 843
MaeIII GTNAC 1 cut(s) 1105
MalI GATC 8 cut(s) 5, 225, 294, 734, 777, 795, 884, 1056
MbiI CCGCTC 1 cut(s) 522
MboI GATC 8 cut(s) 3, 223, 292, 732, 775, 793, 882, 1054
MboII GAAGA 8 cut(s) 265, 311, 707, 740, 773, 815, 851, 959
MfeI CAATTG 1 cut(s) 932
MflI RGATCY 2 cut(s) 732, 1054
MhlI GDGCHC 2 cut(s) 67, 747
Mly113I GGCGCC 1 cut(s) 144
MlyI GAGTC 1 cut(s) 331
MnlI CCTC 7 cut(s) 117, 372, 601, 680, 751, 826, 947
Mph1103I ATGCAT 1 cut(s) 771
MroI TCCGGA 1 cut(s) 404
MroXI GAANNNNTTC 1 cut(s) 843
MseI TTAA 1 cut(s) 398
MslI CAYNNNNRTG 4 cut(s) 170, 609, 750, 783
MspI CCGG 2 cut(s) 141, 405
MspR9I CCNGG 3 cut(s) 252, 278, 1059
MunI CAATTG 1 cut(s) 932
MvaI CCWGG 3 cut(s) 252, 278, 1059
MvnI CGCG 1 cut(s) 497
NarI GGCGCC 1 cut(s) 144
NdeII GATC 8 cut(s) 3, 223, 292, 732, 775, 793, 882, 1054
NlaIII CATG 9 cut(s) 102, 267, 386, 455, 528, 769, 782, 800, 1134
NlaIV GGNNCC 3 cut(s) 145, 580, 929
NmuCI GTSAC 1 cut(s) 1105
NsiI ATGCAT 1 cut(s) 771
NspI RCATGY 1 cut(s) 769
OliI CACNNNNGTG 1 cut(s) 750
PagI TCATGA 1 cut(s) 778
PdmI GAANNNNTTC 1 cut(s) 843
PfeI GAWTC 3 cut(s) 29, 185, 536
PfoI TCCNGGA 1 cut(s) 1057
PkrI GCNGC 3 cut(s) 208, 211, 668
PleI GAGTC 1 cut(s) 331
PluTI GGCGCC 1 cut(s) 147
PpsI GAGTC 1 cut(s) 331
PsiI TTATAA 1 cut(s) 116
Psp124BI GAGCTC 1 cut(s) 67
Psp6I CCWGG 3 cut(s) 250, 276, 1057
PspGI CCWGG 3 cut(s) 250, 276, 1057
PspN4I GGNNCC 3 cut(s) 145, 580, 929
PspPI GGNCC 1 cut(s) 928
PsuI RGATCY 2 cut(s) 732, 1054
RsaI GTAC 2 cut(s) 441, 506
RsaNI GTAC 2 cut(s) 440, 505
RseI CAYNNNNRTG 4 cut(s) 170, 609, 750, 783
SacI GAGCTC 1 cut(s) 67
SaqAI TTAA 1 cut(s) 398
SatI GCNGC 3 cut(s) 207, 210, 667
Sau3AI GATC 8 cut(s) 3, 223, 292, 732, 775, 793, 882, 1054
Sau96I GGNCC 1 cut(s) 928
SchI GAGTC 1 cut(s) 331
ScrFI CCNGG 3 cut(s) 252, 278, 1059
SduI GDGCHC 2 cut(s) 67, 747
SetI ASST 6 cut(s) 67, 85, 282, 846, 906, 1096
SfaNI GCATC 2 cut(s) 723, 778
SfcI CTRYAG 1 cut(s) 68
SfoI GGCGCC 1 cut(s) 145
SinI GGWCC 1 cut(s) 928
SmiMI CAYNNNNRTG 4 cut(s) 170, 609, 750, 783
SsiI CCGC 8 cut(s) 170, 207, 333, 497, 520, 624, 666, 972
SspDI GGCGCC 1 cut(s) 143
SspI AATATT 1 cut(s) 706
SspMI CTAG 4 cut(s) 44, 443, 992, 1091
SstI GAGCTC 1 cut(s) 67
StyD4I CCNGG 3 cut(s) 250, 276, 1057
TaaI ACNGT 1 cut(s) 676
TaiI ACGT 1 cut(s) 846
TaqI TCGA 2 cut(s) 831, 885
TatI WGTACW 1 cut(s) 504
TauI GCSGC 2 cut(s) 209, 669
TfiI GAWTC 3 cut(s) 29, 185, 536
Tru1I TTAA 1 cut(s) 398
Tru9I TTAA 1 cut(s) 398
TscAI CASTG 1 cut(s) 679
TseFI GTSAC 1 cut(s) 1105
TseI GCWGC 1 cut(s) 209
Tsp45I GTSAC 1 cut(s) 1105
TspRI CASTG 1 cut(s) 679
VpaK11BI GGWCC 1 cut(s) 928
XapI RAATTY 4 cut(s) 110, 152, 647, 1043
XceI RCATGY 1 cut(s) 769
XmnI GAANNNNTTC 1 cut(s) 843
XspI CTAG 4 cut(s) 44, 443, 992, 1091
Zsp2I ATGCAT 1 cut(s) 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.