Rroxscaffold_178G00437560

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000178
OG0000144
Physical Location & Seq
Forward (+)
280801 .. 282481
1681 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_178G00437560.1

Sequence Viewer

Length: 1335 bp
ATGCTGTACGGATTAGTTGATAATGACGAGTCCACCAAGAATGGCATCGGCGCAGCTCGCATCTTAAACTCTGGAGATGATCAGACAATGACAGTGGAATTGAAGTTGGTCTATGGCCATAATGAAGTTGGTAATACTACAGAAGATCATGACGACTATCTAATCAACTTAAATAGTGACTTCAACTCATATTTGGTAGAATCAGCAACAAATAGCGACAAGGAAATTTTGTTGATCCATCAGATGCTCGATTCTCTCGACTGTGCTGATGATGATGAGTCGGATATGGAATATCAGAGGACAAGAGGGTTTGTAGTATACAAGATTGACCTCGAGTCTGGCAACTTTCATGAGACACCGCCACAAGACATCATGGAGGAGATTCTACAGAAAATGGGTTTAATTGCTCGTACACGCTTAGCCAAGGTCTGCATGTCTTGGAGTTCACTTGTTATGAGAGCTGATATCCGCAGTGCTCCGCAACTGCCATGGTTAGTACACCCTCAAACCCCAAACACCAACTACTTAACCTTTTCCAGCCTCTCTGAGGGTGAAGTTGTGAACTTGGAGCTCCCAAAGCGATTCCGAGGACAAGGCAAGTTCAAGTTTCGAGCGTCTTCTAAAGGTTGGTTGATCATTTTACAAGAAAAAGGATTCGGCTTTGATATGTTCCTATACAATCCGATTTCTAGAGCCCAACACCAACTTCCTTCCTTAAACACTATTCCATCTTTCCTATCTTTCCAACTAGCAAGAATGCTAGGGAAGGTTATCAACAATCATGCCAACAAACATGCCGAGAATTTTGTATCTAAAGTTGTGTTGTCTAGTCCAAATGTCTCAGAATGCATTGTGGCTGCCGTTTTCGAACCTCAGCATGAATTGGGATTATGCAGACCTGGAGACAAAAGCTGGACTGTCTTTGAGATACTGAATCATGAGGACGACTTCCTCATGGATTTACTTTTTTCGCAGGGCATGCTATACGGCTTTGTTGATAATAGCAAGTCCAGCAAGAATGGCATCGGCGCAGCTCGCATCTTAAACTTTGGAGATGATCAGGCAATGACAGTGGAATTGAAATTGGTCTACGGCCATAAAGAAGTTGGTAATACTACAGAATATCACGATGGCTTTCTAATCTTTTTAAATAGAGACTACAACTCATATTTGTTAGAATCAACAACAAATAGCGACAAGGAAATCTTGTTGATCCATCAAATGCTCGATTGTTTAATCCCCAACTGTGCTGATGATGATGATGATGATGATGATTATGAGTCGGAAATCGAATATCAGAGGACAAGCGGGTTTGCAGTATACATGCAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

444

Amino Acids

50.35

Weight (kDa)

4.63

Isoelectric Point (pI)

32.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 178 - 442 1.8e-21 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 318, 1089, 1320
AciI CCGC 4 cut(s) 359, 469, 479, 1308
AclWI GGATC 2 cut(s) 229, 1207
AcoI YGGCCR 2 cut(s) 115, 1093
AcsI RAATTY 2 cut(s) 225, 802
AfaI GTAC 3 cut(s) 8, 412, 498
AfiI CCNNNNNNNGG 1 cut(s) 547
AgsI TTSAA 4 cut(s) 103, 184, 604, 1081
AhdI GACNNNNNGTC 1 cut(s) 334
AjnI CCWGG 1 cut(s) 898
AjuI GAANNNNNNNTTGG 2 cut(s) 690, 722
AluBI AGCT 5 cut(s) 56, 461, 571, 912, 1034
AluI AGCT 5 cut(s) 56, 461, 571, 912, 1034
Alw21I GWGCWC 2 cut(s) 478, 573
Alw26I GTCTC 4 cut(s) 347, 844, 897, 1149
AlwI GGATC 2 cut(s) 229, 1207
Ama87I CYCGRG 1 cut(s) 332
AoxI GGCC 2 cut(s) 115, 1093
ApeKI GCWGC 3 cut(s) 53, 857, 1031
ApoI RAATTY 2 cut(s) 225, 802
AspLEI GCGC 2 cut(s) 53, 1031
AsuHPI GGTGA 1 cut(s) 563
AsuII TTCGAA 1 cut(s) 867
AvaI CYCGRG 1 cut(s) 332
BalI TGGCCA 1 cut(s) 117
BanII GRGCYC 2 cut(s) 573, 697
BbsI GAAGAC 1 cut(s) 609
Bbv12I GWGCWC 2 cut(s) 478, 573
BbvCI CCTCAGC 1 cut(s) 873
BbvI GCAGC 3 cut(s) 65, 844, 1043
BccI CCATC 4 cut(s) 246, 736, 1124, 1224
BceAI ACGGC 3 cut(s) 845, 1003, 1108
BciT130I CCWGG 1 cut(s) 900
BclI TGATCA 3 cut(s) 79, 633, 1057
BcoDI GTCTC 4 cut(s) 347, 844, 897, 1149
BfaI CTAG 4 cut(s) 690, 749, 761, 828
BfmI CTRYAG 3 cut(s) 138, 386, 1116
BisI GCNGC 3 cut(s) 54, 858, 1032
BlpI GCTNAGC 1 cut(s) 418
BlsI GCNGC 3 cut(s) 55, 859, 1033
Bme1390I CCNGG 1 cut(s) 900
BmeRI GACNNNNNGTC 1 cut(s) 334
BmeT110I CYCGRG 1 cut(s) 332
BmrFI CCNGG 1 cut(s) 900
BmsI GCATC 5 cut(s) 54, 69, 234, 1032, 1047
BpiI GAAGAC 1 cut(s) 609
BpmI CTGGAG 2 cut(s) 93, 921
Bpu10I CCTNAGC 1 cut(s) 873
Bpu1102I GCTNAGC 1 cut(s) 418
Bpu14I TTCGAA 1 cut(s) 867
BsaJI CCNNGG 3 cut(s) 423, 488, 586
Bsc4I CCNNNNNNNGG 1 cut(s) 547
Bse3DI GCAATG 1 cut(s) 1071
BseBI CCWGG 1 cut(s) 900
BseDI CCNNGG 3 cut(s) 423, 488, 586
BseLI CCNNNNNNNGG 1 cut(s) 547
BseMI GCAATG 1 cut(s) 1071
BseMII CTCAG 3 cut(s) 537, 855, 887
BseRI GAGGAG 1 cut(s) 392
BseXI GCAGC 3 cut(s) 65, 844, 1043
BshFI GGCC 2 cut(s) 117, 1095
BsiHKAI GWGCWC 2 cut(s) 478, 573
BsiHKCI CYCGRG 1 cut(s) 332
BslI CCNNNNNNNGG 1 cut(s) 547
BsmAI GTCTC 4 cut(s) 347, 844, 897, 1149
BsmI GAATGC 2 cut(s) 762, 851
BsnI GGCC 2 cut(s) 117, 1095
BsoBI CYCGRG 1 cut(s) 332
Bsp119I TTCGAA 1 cut(s) 867
Bsp1286I GDGCHC 3 cut(s) 478, 573, 697
Bsp143I GATC 6 cut(s) 79, 145, 234, 633, 1057, 1212
Bsp1720I GCTNAGC 1 cut(s) 418
Bsp19I CCATGG 1 cut(s) 488
BspACI CCGC 4 cut(s) 359, 469, 479, 1308
BspANI GGCC 2 cut(s) 117, 1095
BspCNI CTCAG 3 cut(s) 538, 854, 886
BspHI TCATGA 3 cut(s) 148, 349, 937
BspPI GGATC 2 cut(s) 229, 1207
BspT104I TTCGAA 1 cut(s) 867
BsrDI GCAATG 1 cut(s) 1071
BssECI CCNNGG 3 cut(s) 423, 488, 586
BssMI GATC 6 cut(s) 79, 145, 234, 633, 1057, 1212
BssNAI GTATAC 2 cut(s) 319, 1321
BssT1I CCWWGG 2 cut(s) 423, 488
Bst1107I GTATAC 2 cut(s) 319, 1321
Bst2UI CCWGG 1 cut(s) 900
Bst4CI ACNGT 5 cut(s) 94, 263, 919, 1072, 1247
BstAPI GCANNNNNTGC 1 cut(s) 979
BstBI TTCGAA 1 cut(s) 867
BstC8I GCNNGC 3 cut(s) 58, 980, 1036
BstDEI CTNAG 4 cut(s) 418, 546, 841, 873
BstDSI CCRYGG 1 cut(s) 488
BstENI CCTNNNNNAGG 1 cut(s) 545
BstHHI GCGC 2 cut(s) 53, 1031
BstKTI GATC 6 cut(s) 82, 148, 237, 636, 1060, 1215
BstMAI GTCTC 4 cut(s) 347, 844, 897, 1149
BstMBI GATC 6 cut(s) 79, 145, 234, 633, 1057, 1212
BstMWI GCNNNNNNNGC 6 cut(s) 57, 577, 979, 1011, 1020, 1035
BstNI CCWGG 1 cut(s) 900
BstNSI RCATGY 4 cut(s) 436, 797, 982, 1327
BstSCI CCNGG 1 cut(s) 898
BstSFI CTRYAG 3 cut(s) 138, 386, 1116
BstV1I GCAGC 3 cut(s) 65, 844, 1043
BstV2I GAAGAC 1 cut(s) 609
BstZ17I GTATAC 2 cut(s) 319, 1321
BsuRI GGCC 2 cut(s) 117, 1095
BtgI CCRYGG 1 cut(s) 488
BtsI GCAGTG 1 cut(s) 478
BtsIMutI CAGTG 3 cut(s) 99, 478, 1077
Cac8I GCNNGC 3 cut(s) 58, 980, 1036
CciI TCATGA 3 cut(s) 148, 349, 937
CfoI GCGC 2 cut(s) 53, 1031
CseI GACGC 1 cut(s) 603
Csp6I GTAC 3 cut(s) 7, 411, 497
CspCI CAANNNNNGTGG 4 cut(s) 75, 110, 1053, 1088
CviQI GTAC 3 cut(s) 7, 411, 497
DdeI CTNAG 4 cut(s) 418, 546, 841, 873
DpnI GATC 6 cut(s) 81, 147, 236, 635, 1059, 1214
DpnII GATC 6 cut(s) 79, 145, 234, 633, 1057, 1212
DraI TTTAAA 1 cut(s) 1149
DriI GACNNNNNGTC 1 cut(s) 334
EaeI YGGCCR 2 cut(s) 115, 1093
Eam1105I GACNNNNNGTC 1 cut(s) 334
Ecl136II GAGCTC 1 cut(s) 571
Eco130I CCWWGG 2 cut(s) 423, 488
Eco24I GRGCYC 2 cut(s) 573, 697
Eco32I GATATC 1 cut(s) 466
Eco53kI GAGCTC 1 cut(s) 571
Eco88I CYCGRG 1 cut(s) 332
EcoICRI GAGCTC 1 cut(s) 571
EcoNI CCTNNNNNAGG 1 cut(s) 545
EcoRII CCWGG 1 cut(s) 898
EcoRV GATATC 1 cut(s) 466
EcoT14I CCWWGG 2 cut(s) 423, 488
EcoT22I ATGCAT 1 cut(s) 851
EcoT38I GRGCYC 2 cut(s) 573, 697
ErhI CCWWGG 2 cut(s) 423, 488
FalI AAGNNNNNCTT 2 cut(s) 1190, 1222
FauI CCCGC 1 cut(s) 1301
FbaI TGATCA 3 cut(s) 79, 633, 1057
FblI GTMKAC 3 cut(s) 318, 1089, 1320
Fnu4HI GCNGC 3 cut(s) 54, 858, 1032
FriOI GRGCYC 2 cut(s) 573, 697
Fsp4HI GCNGC 3 cut(s) 54, 858, 1032
FspBI CTAG 4 cut(s) 690, 749, 761, 828
GlaI GCGC 2 cut(s) 52, 1030
GluI GCNGC 3 cut(s) 54, 858, 1032
GsuI CTGGAG 2 cut(s) 93, 921
HaeIII GGCC 2 cut(s) 117, 1095
HgaI GACGC 1 cut(s) 603
HhaI GCGC 2 cut(s) 53, 1031
Hin6I GCGC 2 cut(s) 51, 1029
HinP1I GCGC 2 cut(s) 51, 1029
HphI GGTGA 1 cut(s) 563
Hpy166II GTNNAC 8 cut(s) 33, 319, 413, 446, 499, 562, 1090, 1321
Hpy188III TCNNGA 7 cut(s) 72, 149, 257, 350, 690, 938, 1127
Hpy8I GTNNAC 8 cut(s) 33, 319, 413, 446, 499, 562, 1090, 1321
HpyAV CCTTC 2 cut(s) 720, 760
HpyCH4III ACNGT 5 cut(s) 94, 263, 919, 1072, 1247
HpyCH4V TGCA 5 cut(s) 432, 849, 894, 1316, 1327
HpyF10VI GCNNNNNNNGC 6 cut(s) 57, 577, 979, 1011, 1020, 1035
HpyF3I CTNAG 4 cut(s) 418, 546, 841, 873
HspAI GCGC 2 cut(s) 51, 1029
Ksp22I TGATCA 3 cut(s) 79, 633, 1057
Kzo9I GATC 6 cut(s) 79, 145, 234, 633, 1057, 1212
LmnI GCTCC 3 cut(s) 481, 568, 576
LpnPI CCDG 9 cut(s) 57, 324, 550, 885, 898, 912, 959, 1024, 1046
Lsp1109I GCAGC 3 cut(s) 65, 844, 1043
LweI GCATC 5 cut(s) 54, 69, 234, 1032, 1047
MaeI CTAG 4 cut(s) 690, 749, 761, 828
MaeIII GTNAC 1 cut(s) 176
MalI GATC 6 cut(s) 81, 147, 236, 635, 1059, 1214
MboI GATC 6 cut(s) 79, 145, 234, 633, 1057, 1212
MboII GAAGA 2 cut(s) 155, 609
MhlI GDGCHC 3 cut(s) 478, 573, 697
MlsI TGGCCA 1 cut(s) 117
MluCI AATT 7 cut(s) 98, 225, 402, 802, 881, 1076, 1082
MluNI TGGCCA 1 cut(s) 117
MlyI GAGTC 4 cut(s) 38, 287, 344, 1289
MmeI TCCRAC 3 cut(s) 261, 769, 1263
Mox20I TGGCCA 1 cut(s) 117
Mph1103I ATGCAT 1 cut(s) 851
MscI TGGCCA 1 cut(s) 117
MseI TTAA 8 cut(s) 65, 170, 401, 527, 716, 1043, 1148, 1235
Msp20I TGGCCA 1 cut(s) 117
MspR9I CCNGG 1 cut(s) 900
Mva1269I GAATGC 2 cut(s) 762, 851
MvaI CCWGG 1 cut(s) 900
MwoI GCNNNNNNNGC 6 cut(s) 57, 577, 979, 1011, 1020, 1035
NcoI CCATGG 1 cut(s) 488
NdeII GATC 6 cut(s) 79, 145, 234, 633, 1057, 1212
NmeAIII GCCGAG 1 cut(s) 823
NmuCI GTSAC 1 cut(s) 176
NsiI ATGCAT 1 cut(s) 851
NspI RCATGY 4 cut(s) 436, 797, 982, 1327
NspV TTCGAA 1 cut(s) 867
PaeI GCATGC 1 cut(s) 982
PaeR7I CTCGAG 1 cut(s) 332
PagI TCATGA 3 cut(s) 148, 349, 937
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 2 cut(s) 762, 851
PfeI GAWTC 7 cut(s) 200, 251, 382, 582, 654, 934, 1178
PkrI GCNGC 3 cut(s) 55, 859, 1033
PleI GAGTC 4 cut(s) 37, 286, 343, 1288
PpsI GAGTC 4 cut(s) 37, 286, 343, 1288
Psp124BI GAGCTC 1 cut(s) 573
Psp6I CCWGG 1 cut(s) 898
PspGI CCWGG 1 cut(s) 898
PspXI VCTCGAGB 1 cut(s) 332
RsaI GTAC 3 cut(s) 8, 412, 498
RsaNI GTAC 3 cut(s) 7, 411, 497
SacI GAGCTC 1 cut(s) 573
SaqAI TTAA 8 cut(s) 65, 170, 401, 527, 716, 1043, 1148, 1235
SatI GCNGC 3 cut(s) 54, 858, 1032
Sau3AI GATC 6 cut(s) 79, 145, 234, 633, 1057, 1212
SchI GAGTC 4 cut(s) 38, 287, 344, 1289
ScrFI CCNGG 1 cut(s) 900
SduI GDGCHC 3 cut(s) 478, 573, 697
SfaNI GCATC 5 cut(s) 54, 69, 234, 1032, 1047
SfcI CTRYAG 3 cut(s) 138, 386, 1116
Sfr274I CTCGAG 1 cut(s) 332
SfuI TTCGAA 1 cut(s) 867
SlaI CTCGAG 1 cut(s) 332
SmlI CTYRAG 1 cut(s) 332
SmoI CTYRAG 1 cut(s) 332
SphI GCATGC 1 cut(s) 982
Sse9I AATT 7 cut(s) 98, 225, 402, 802, 881, 1076, 1082
SsiI CCGC 4 cut(s) 359, 469, 479, 1308
SspMI CTAG 4 cut(s) 690, 749, 761, 828
SstI GAGCTC 1 cut(s) 573
StyD4I CCNGG 1 cut(s) 898
StyI CCWWGG 2 cut(s) 423, 488
TaaI ACNGT 5 cut(s) 94, 263, 919, 1072, 1247
TaqI TCGA 7 cut(s) 249, 258, 333, 610, 867, 1227, 1290
TasI AATT 7 cut(s) 98, 225, 402, 802, 881, 1076, 1082
TatI WGTACW 1 cut(s) 496
TfiI GAWTC 7 cut(s) 200, 251, 382, 582, 654, 934, 1178
Tru1I TTAA 8 cut(s) 65, 170, 401, 527, 716, 1043, 1148, 1235
Tru9I TTAA 8 cut(s) 65, 170, 401, 527, 716, 1043, 1148, 1235
TscAI CASTG 3 cut(s) 99, 478, 1077
TseFI GTSAC 1 cut(s) 176
TseI GCWGC 3 cut(s) 53, 857, 1031
Tsp45I GTSAC 1 cut(s) 176
TspDTI ATGAA 3 cut(s) 138, 338, 894
TspGWI ACGGA 1 cut(s) 24
TspRI CASTG 3 cut(s) 99, 478, 1077
XagI CCTNNNNNAGG 1 cut(s) 545
XapI RAATTY 2 cut(s) 225, 802
XbaI TCTAGA 1 cut(s) 689
XceI RCATGY 4 cut(s) 436, 797, 982, 1327
XcmI CCANNNNNNNNNTGG 2 cut(s) 125, 1103
XhoI CTCGAG 1 cut(s) 332
XmiI GTMKAC 3 cut(s) 318, 1089, 1320
XspI CTAG 4 cut(s) 690, 749, 761, 828
Zsp2I ATGCAT 1 cut(s) 851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.