RLG00000014604

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000144
Physical Location & Seq
Reverse (-)
55281511 .. 55282992
1482 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014604

Sequence Viewer

Length: 1482 bp
ATGGTCATGCTCTCTCTATATTTGTCTTACAGTAACTTGGGACACTACCTCCGCTGGTTTACCAGGTCTGTTTCCTTCAAGCAATTGCATGAACACAAAATATCTGCAGGCAAGAGAAAACAAATCGAGAACTGCAACGACGACCAAATTACTTGTCATGGGTCAGTTGGGTTCTGGCAGACACCGCCACAAGACATCACGGAGGAGATTCTACAGAAAATGGGTTTAATTGCTCGTACACACTTAGCCAAGGTCTGCATGTCTTGGAGTTCACTTGTTATGCCAGCGGAAATCCGCAGTGCTCCTCAATTGCCATGGTTAGTACACCCTCAAACCCCAAACACCAACTACTTAACCTTTTCCAGCCTCTCTGAGGGTGAAGTTGTGAACTTGGAGCTCCCAAAGCGATTCCGAGGACAAGGCAAGTTCAAGTTTCGAGCGTCTTCTAAAGGTTGGTTGATCATTTTACAAGAAAAAGGATTCGGCTTTGATATGTTCCTATACAATCCGATTTCTAGAGCCCAACACCAACTTCCTTCCTTAAACACTATTCCATCTTTCCTATCTTTCCAACTAGCAAGAATGCTAGGGAAGGTTATCAACAATCATGCCGACAAACATGCCGAGAATTTTGTATCTAAAGTTGTGTTGTCTAGTCCAAATATCTCAGAATGCATTGTGGCTGCCGTTTTCGAACCTCAGAAGGAATTGGGATTATGCAGACCTGGAGACAAAAGCTGGACTGTCTTTGAGATACTGAATCATGAGGACGACTTCCTCATGGATTTACTTTTTTCGCAGGGCATGCTATACGGCTTAGTTGATAATGTTGATAATAGCAAGTCCACCAAGAATGGCATCGGCGCAGCTCGCATCTTAAACTTTGGAGATGATCAGGCAATGACAGTGGAATTGAAGTTGGTCTACGGCCATAAAGAAGTTGGTAATACTACAGAATATCATGATGACTATCTAATCTTTTTAAATAGAGACTACAACTCATATTTGTTAGAATCAACAAAAAATAGCGACAAGGAAATCTTGTTGATCCATCAAATGCTCGATTGTTTAATGCCCAACTGTGCTGCTGCTGCTGCTAATGATGATGATGACGACGATGATGAGTCGGAAATCGAATATCAGAGGACAAGGGGGTTTGTAGTATACAAGATTGACCTCGAGTGTGGCAACTTTCATGAGGTCCAAAATTTGGGGGACCAAATAATATTTTTGGCAGAACATAGCTCTTCCTTGTCCTTTCCCGCAAGTGATTTCAAACTACAAGGAAATTGCATTTATTTTGCAACAAGCGGATACGCAACTATCAACCTAGCTCGTAAGACCTTTCTTGGATCAAATATCTCTCGTGAAATCCGAATCTTTAGTTTAGATGACGGAAAAATTAAGCGACCGTTTCCAAGTCTTGATGTTGCTGGCATTACATCACCTAGTCAACTGAGTTGGTTTAGTCCAAGTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

494

Amino Acids

55.76

Weight (kDa)

5.69

Isoelectric Point (pI)

45.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 120 - 435 1.4e-37 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1210
AccI GTMKAC 2 cut(s) 924, 1164
AciI CCGC 6 cut(s) 52, 185, 287, 295, 1263, 1311
AclWI GGATC 2 cut(s) 1042, 1360
AcoI YGGCCR 1 cut(s) 928
AcsI RAATTY 2 cut(s) 628, 1207
AfaI GTAC 2 cut(s) 238, 324
AfiI CCNNNNNNNGG 2 cut(s) 373, 1210
AgsI TTSAA 4 cut(s) 79, 430, 916, 1276
AjnI CCWGG 2 cut(s) 62, 724
AjuI GAANNNNNNNTTGG 2 cut(s) 516, 548
AluBI AGCT 5 cut(s) 397, 738, 869, 1245, 1334
AluI AGCT 5 cut(s) 397, 738, 869, 1245, 1334
Alw21I GWGCWC 2 cut(s) 304, 399
Alw26I GTCTC 2 cut(s) 723, 984
AlwI GGATC 2 cut(s) 1042, 1360
Ama87I CYCGRG 1 cut(s) 1178
AoxI GGCC 1 cut(s) 928
ApeKI GCWGC 6 cut(s) 683, 866, 1085, 1088, 1091, 1094
ApoI RAATTY 2 cut(s) 628, 1207
ArsI GACNNNNNNTTYG 2 cut(s) 139, 171
AspLEI GCGC 1 cut(s) 866
AspS9I GGNCC 2 cut(s) 1201, 1216
AsuHPI GGTGA 2 cut(s) 389, 1437
AsuII TTCGAA 1 cut(s) 693
AvaI CYCGRG 1 cut(s) 1178
AvaII GGWCC 2 cut(s) 1201, 1216
BanII GRGCYC 2 cut(s) 399, 523
BarI GAAGNNNNNNTAC 2 cut(s) 908, 940
BauI CACGAG 1 cut(s) 1365
BbsI GAAGAC 1 cut(s) 435
Bbv12I GWGCWC 2 cut(s) 304, 399
BbvI GCAGC 6 cut(s) 670, 878, 1072, 1075, 1078, 1081
BccI CCATC 2 cut(s) 562, 1059
BceAI ACGGC 3 cut(s) 671, 829, 943
BcgI CGANNNNNNTGC 2 cut(s) 602, 636
BciT130I CCWGG 2 cut(s) 64, 726
BciVI GTATCC 1 cut(s) 1307
BclI TGATCA 2 cut(s) 459, 892
BcoDI GTCTC 2 cut(s) 723, 984
BfaI CTAG 6 cut(s) 516, 575, 587, 654, 1331, 1449
BfmI CTRYAG 3 cut(s) 105, 212, 951
BfuI GTATCC 1 cut(s) 1307
BisI GCNGC 6 cut(s) 684, 867, 1086, 1089, 1092, 1095
BlsI GCNGC 6 cut(s) 685, 868, 1087, 1090, 1093, 1096
Bme1390I CCNGG 2 cut(s) 64, 726
Bme18I GGWCC 2 cut(s) 1201, 1216
BmeT110I CYCGRG 1 cut(s) 1178
BmgT120I GGNCC 2 cut(s) 1201, 1216
BmiI GGNNCC 1 cut(s) 1217
BmrFI CCNGG 2 cut(s) 64, 726
BmsI GCATC 2 cut(s) 867, 882
BpiI GAAGAC 1 cut(s) 435
BpmI CTGGAG 1 cut(s) 747
Bpu14I TTCGAA 1 cut(s) 693
BsaBI GATNNNNATC 1 cut(s) 969
BsaJI CCNNGG 3 cut(s) 249, 314, 412
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bsc4I CCNNNNNNNGG 2 cut(s) 373, 1210
Bse3DI GCAATG 1 cut(s) 906
Bse8I GATNNNNATC 1 cut(s) 969
BseBI CCWGG 2 cut(s) 64, 726
BseDI CCNNGG 3 cut(s) 249, 314, 412
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 2 cut(s) 373, 1210
BseMI GCAATG 1 cut(s) 906
BseMII CTCAG 4 cut(s) 363, 681, 713, 1448
BseRI GAGGAG 2 cut(s) 218, 294
BseXI GCAGC 6 cut(s) 670, 878, 1072, 1075, 1078, 1081
Bsh1285I CGRYCG 1 cut(s) 1412
BshFI GGCC 1 cut(s) 930
BsiEI CGRYCG 1 cut(s) 1412
BsiHKAI GWGCWC 2 cut(s) 304, 399
BsiHKCI CYCGRG 1 cut(s) 1178
BslFI GGGAC 2 cut(s) 54, 1229
BslI CCNNNNNNNGG 2 cut(s) 373, 1210
BsmAI GTCTC 2 cut(s) 723, 984
BsmFI GGGAC 2 cut(s) 54, 1229
BsmI GAATGC 2 cut(s) 588, 677
BsnI GGCC 1 cut(s) 930
BsoBI CYCGRG 1 cut(s) 1178
Bsp119I TTCGAA 1 cut(s) 693
Bsp1286I GDGCHC 3 cut(s) 304, 399, 523
Bsp143I GATC 4 cut(s) 459, 892, 1047, 1352
Bsp19I CCATGG 1 cut(s) 314
BspACI CCGC 6 cut(s) 52, 185, 287, 295, 1263, 1311
BspANI GGCC 1 cut(s) 930
BspCNI CTCAG 4 cut(s) 364, 680, 712, 1449
BspHI TCATGA 3 cut(s) 763, 961, 1195
BspLI GGNNCC 1 cut(s) 1217
BspMAI CTGCAG 1 cut(s) 109
BspPI GGATC 2 cut(s) 1042, 1360
BspQI GCTCTTC 1 cut(s) 1252
BspT104I TTCGAA 1 cut(s) 693
BsrDI GCAATG 1 cut(s) 906
BssECI CCNNGG 3 cut(s) 249, 314, 412
BssMI GATC 4 cut(s) 459, 892, 1047, 1352
BssNAI GTATAC 1 cut(s) 1165
BssSI CACGAG 1 cut(s) 1365
BssT1I CCWWGG 2 cut(s) 249, 314
Bst1107I GTATAC 1 cut(s) 1165
Bst2BI CACGAG 1 cut(s) 1365
Bst2UI CCWGG 2 cut(s) 64, 726
Bst4CI ACNGT 5 cut(s) 32, 745, 907, 1082, 1413
Bst6I CTCTTC 1 cut(s) 1252
BstAPI GCANNNNNTGC 1 cut(s) 805
BstBI TTCGAA 1 cut(s) 693
BstC8I GCNNGC 5 cut(s) 109, 285, 806, 871, 1435
BstDEI CTNAG 6 cut(s) 244, 372, 667, 699, 817, 1457
BstDSI CCRYGG 1 cut(s) 314
BstENI CCTNNNNNAGG 1 cut(s) 371
BstHHI GCGC 1 cut(s) 866
BstKTI GATC 4 cut(s) 462, 895, 1050, 1355
BstMAI GTCTC 2 cut(s) 723, 984
BstMBI GATC 4 cut(s) 459, 892, 1047, 1352
BstMCI CGRYCG 1 cut(s) 1412
BstMWI GCNNNNNNNGC 6 cut(s) 184, 403, 805, 870, 1091, 1094
BstNI CCWGG 2 cut(s) 64, 726
BstNSI RCATGY 3 cut(s) 262, 623, 808
BstSCI CCNGG 2 cut(s) 62, 724
BstSFI CTRYAG 3 cut(s) 105, 212, 951
BstV1I GCAGC 6 cut(s) 670, 878, 1072, 1075, 1078, 1081
BstV2I GAAGAC 1 cut(s) 435
BstZ17I GTATAC 1 cut(s) 1165
BsuI GTATCC 1 cut(s) 1307
BsuRI GGCC 1 cut(s) 930
BtgI CCRYGG 1 cut(s) 314
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 2 cut(s) 304, 912
Cac8I GCNNGC 5 cut(s) 109, 285, 806, 871, 1435
CciI TCATGA 3 cut(s) 763, 961, 1195
CfoI GCGC 1 cut(s) 866
Cfr13I GGNCC 2 cut(s) 1201, 1216
CseI GACGC 1 cut(s) 429
CsiI ACCWGGT 1 cut(s) 62
Csp6I GTAC 2 cut(s) 237, 323
CspCI CAANNNNNGTGG 2 cut(s) 888, 923
CviQI GTAC 2 cut(s) 237, 323
DdeI CTNAG 6 cut(s) 244, 372, 667, 699, 817, 1457
DpnI GATC 4 cut(s) 461, 894, 1049, 1354
DpnII GATC 4 cut(s) 459, 892, 1047, 1352
DraI TTTAAA 1 cut(s) 984
EaeI YGGCCR 1 cut(s) 928
Eam1104I CTCTTC 1 cut(s) 1252
EarI CTCTTC 1 cut(s) 1252
Ecl136II GAGCTC 1 cut(s) 397
Eco130I CCWWGG 2 cut(s) 249, 314
Eco24I GRGCYC 2 cut(s) 399, 523
Eco47I GGWCC 2 cut(s) 1201, 1216
Eco53kI GAGCTC 1 cut(s) 397
Eco88I CYCGRG 1 cut(s) 1178
EcoICRI GAGCTC 1 cut(s) 397
EcoNI CCTNNNNNAGG 1 cut(s) 371
EcoRII CCWGG 2 cut(s) 62, 724
EcoT14I CCWWGG 2 cut(s) 249, 314
EcoT22I ATGCAT 1 cut(s) 677
EcoT38I GRGCYC 2 cut(s) 399, 523
ErhI CCWWGG 2 cut(s) 249, 314
FalI AAGNNNNNCTT 2 cut(s) 1025, 1057
FaqI GGGAC 2 cut(s) 54, 1229
FauI CCCGC 1 cut(s) 1270
FbaI TGATCA 2 cut(s) 459, 892
FblI GTMKAC 2 cut(s) 924, 1164
Fnu4HI GCNGC 6 cut(s) 684, 867, 1086, 1089, 1092, 1095
FriOI GRGCYC 2 cut(s) 399, 523
Fsp4HI GCNGC 6 cut(s) 684, 867, 1086, 1089, 1092, 1095
FspBI CTAG 6 cut(s) 516, 575, 587, 654, 1331, 1449
GlaI GCGC 1 cut(s) 865
GluI GCNGC 6 cut(s) 684, 867, 1086, 1089, 1092, 1095
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 1 cut(s) 930
HgaI GACGC 1 cut(s) 429
HhaI GCGC 1 cut(s) 866
Hin6I GCGC 1 cut(s) 864
HinP1I GCGC 1 cut(s) 864
HincII GTYRAC 1 cut(s) 1454
HindII GTYRAC 1 cut(s) 1454
HinfI GANTC 7 cut(s) 208, 408, 480, 760, 1013, 1124, 1377
HphI GGTGA 2 cut(s) 389, 1437
Hpy166II GTNNAC 9 cut(s) 60, 239, 272, 325, 388, 846, 925, 1165, 1454
Hpy188I TCNGA 8 cut(s) 373, 413, 510, 670, 702, 1129, 1143, 1376
Hpy188III TCNNGA 7 cut(s) 127, 516, 764, 962, 1196, 1367, 1424
Hpy8I GTNNAC 9 cut(s) 60, 239, 272, 325, 388, 846, 925, 1165, 1454
Hpy99I CGWCG 2 cut(s) 143, 1118
HpyAV CCTTC 4 cut(s) 85, 546, 586, 697
HpyCH4III ACNGT 5 cut(s) 32, 745, 907, 1082, 1413
HpyCH4V TGCA 8 cut(s) 88, 107, 135, 258, 675, 720, 1293, 1304
HpyF10VI GCNNNNNNNGC 6 cut(s) 184, 403, 805, 870, 1091, 1094
HpyF3I CTNAG 6 cut(s) 244, 372, 667, 699, 817, 1457
HspAI GCGC 1 cut(s) 864
Ksp22I TGATCA 2 cut(s) 459, 892
Kzo9I GATC 4 cut(s) 459, 892, 1047, 1352
LguI GCTCTTC 1 cut(s) 1252
LmnI GCTCC 3 cut(s) 307, 394, 402
Lsp1109I GCAGC 6 cut(s) 670, 878, 1072, 1075, 1078, 1081
LweI GCATC 2 cut(s) 867, 882
MabI ACCWGGT 1 cut(s) 62
MaeI CTAG 6 cut(s) 516, 575, 587, 654, 1331, 1449
MaeIII GTNAC 1 cut(s) 32
MalI GATC 4 cut(s) 461, 894, 1049, 1354
MboI GATC 4 cut(s) 459, 892, 1047, 1352
MboII GAAGA 2 cut(s) 435, 1239
MfeI CAATTG 2 cut(s) 83, 308
MhlI GDGCHC 3 cut(s) 304, 399, 523
MlyI GAGTC 1 cut(s) 1133
MmeI TCCRAC 2 cut(s) 595, 1107
Mph1103I ATGCAT 1 cut(s) 677
MseI TTAA 7 cut(s) 227, 353, 542, 878, 983, 1070, 1404
MspA1I CMGCKG 2 cut(s) 54, 287
MspR9I CCNGG 2 cut(s) 64, 726
MunI CAATTG 2 cut(s) 83, 308
Mva1269I GAATGC 2 cut(s) 588, 677
MvaI CCWGG 2 cut(s) 64, 726
MwoI GCNNNNNNNGC 6 cut(s) 184, 403, 805, 870, 1091, 1094
NcoI CCATGG 1 cut(s) 314
NdeII GATC 4 cut(s) 459, 892, 1047, 1352
NlaIV GGNNCC 1 cut(s) 1217
NmeAIII GCCGAG 1 cut(s) 649
NsiI ATGCAT 1 cut(s) 677
NspI RCATGY 3 cut(s) 262, 623, 808
NspV TTCGAA 1 cut(s) 693
PaeI GCATGC 1 cut(s) 808
PaeR7I CTCGAG 1 cut(s) 1178
PagI TCATGA 3 cut(s) 763, 961, 1195
PciSI GCTCTTC 1 cut(s) 1252
PcsI WCGNNNNNNNCGW 1 cut(s) 1372
PctI GAATGC 2 cut(s) 588, 677
PfeI GAWTC 6 cut(s) 208, 408, 480, 760, 1013, 1377
PflMI CCANNNNNTGG 1 cut(s) 1210
PkrI GCNGC 6 cut(s) 685, 868, 1087, 1090, 1093, 1096
PleI GAGTC 1 cut(s) 1132
PpsI GAGTC 1 cut(s) 1132
Psp124BI GAGCTC 1 cut(s) 399
Psp6I CCWGG 2 cut(s) 62, 724
PspGI CCWGG 2 cut(s) 62, 724
PspN4I GGNNCC 1 cut(s) 1217
PspPI GGNCC 2 cut(s) 1201, 1216
PspXI VCTCGAGB 1 cut(s) 1178
PstI CTGCAG 1 cut(s) 109
RsaI GTAC 2 cut(s) 238, 324
RsaNI GTAC 2 cut(s) 237, 323
SacI GAGCTC 1 cut(s) 399
SapI GCTCTTC 1 cut(s) 1252
SaqAI TTAA 7 cut(s) 227, 353, 542, 878, 983, 1070, 1404
SatI GCNGC 6 cut(s) 684, 867, 1086, 1089, 1092, 1095
Sau3AI GATC 4 cut(s) 459, 892, 1047, 1352
Sau96I GGNCC 2 cut(s) 1201, 1216
SchI GAGTC 1 cut(s) 1133
ScrFI CCNGG 2 cut(s) 64, 726
SduI GDGCHC 3 cut(s) 304, 399, 523
SexAI ACCWGGT 1 cut(s) 62
SfaNI GCATC 2 cut(s) 867, 882
SfcI CTRYAG 3 cut(s) 105, 212, 951
Sfr274I CTCGAG 1 cut(s) 1178
SfuI TTCGAA 1 cut(s) 693
SinI GGWCC 2 cut(s) 1201, 1216
SlaI CTCGAG 1 cut(s) 1178
SmlI CTYRAG 1 cut(s) 1178
SmoI CTYRAG 1 cut(s) 1178
SphI GCATGC 1 cut(s) 808
SsiI CCGC 6 cut(s) 52, 185, 287, 295, 1263, 1311
SspI AATATT 1 cut(s) 1227
SspMI CTAG 6 cut(s) 516, 575, 587, 654, 1331, 1449
SstI GAGCTC 1 cut(s) 399
StyD4I CCNGG 2 cut(s) 62, 724
StyI CCWWGG 2 cut(s) 249, 314
TaaI ACNGT 5 cut(s) 32, 745, 907, 1082, 1413
TaqI TCGA 6 cut(s) 126, 436, 693, 1062, 1134, 1179
TatI WGTACW 1 cut(s) 322
TfiI GAWTC 6 cut(s) 208, 408, 480, 760, 1013, 1377
Tru1I TTAA 7 cut(s) 227, 353, 542, 878, 983, 1070, 1404
Tru9I TTAA 7 cut(s) 227, 353, 542, 878, 983, 1070, 1404
TscAI CASTG 2 cut(s) 304, 912
TseI GCWGC 6 cut(s) 683, 866, 1085, 1088, 1091, 1094
TspDTI ATGAA 2 cut(s) 105, 1184
TspGWI ACGGA 2 cut(s) 215, 1410
TspRI CASTG 2 cut(s) 304, 912
Van91I CCANNNNNTGG 1 cut(s) 1210
VpaK11BI GGWCC 2 cut(s) 1201, 1216
XagI CCTNNNNNAGG 1 cut(s) 371
XapI RAATTY 2 cut(s) 628, 1207
XbaI TCTAGA 1 cut(s) 515
XceI RCATGY 3 cut(s) 262, 623, 808
XcmI CCANNNNNNNNNTGG 1 cut(s) 938
XhoI CTCGAG 1 cut(s) 1178
XmiI GTMKAC 2 cut(s) 924, 1164
XspI CTAG 6 cut(s) 516, 575, 587, 654, 1331, 1449
Zsp2I ATGCAT 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.