Rmu_sc0012965.1_g000003

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012965.1
OG0000144
Physical Location & Seq
Reverse (-)
8650 .. 16794
8145 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012965.1_g000003.1.cds

Sequence Viewer

Length: 2406 bp
atggcacaagggagagggaagcggataaggaaggttaagaaggttcctccacctcaacatccagctacaacaactgtgacagataatatgttagctacacctactgtgagtgagaatttgccagcaacaactattgtgcatgcttatgtgcgagaaagagctaacatgccaccaagagctgatgtgtcactgcaagctaacgtgccaccaccagctaatatggccccaacaatgcatcaactgcctacccaacatgggatgccttttatgggcattggtatgaaaagaaagcgtggtaaatcaggtggtaaagctcttcaggaccttataaaggctaacggtggacctctgcgtgttgactttcatccaaccatccatgtcccgtctgatgacataatttctaaaatgtttacttctgagataggaattactgtcagaggtggggcaccagtatgtcaatatggttggtctgatgttgatgaagatgataagagggacctaagagaggatttgcgggtgttctttgtggtggatctaagcgatccagttgttgttgcttatgtcgattctaaaatgtccactgcttactcccaattcaagtctcgactgaagaaggagtggcaaggatttggctcacctgagctgggacgagcaaatctacctaatgcagatctatggaatgagaggcctgtctcgcattggcactggctttgtgacaacatatacaccaaccagtcttgcatagttattactgagactctagtcgtttgtggttgcttagtgtttggtggtgtggtgattaaaacacaactacgccgcaaaccctgggagaaaccacctgacaatatcgtggagatgagtctgatgaatgatcccagctgggagatattatctgacgatatcatggagatggttgtgccgcacctgagtgtacgtgatcgtatacgattaagcagtgtttgcaagtcttggaacaccgttcctatgcgcagagatatccctagtgctccacatcaactcccctggttaatacttcctcaatgttgccataagagcttgagcttttacgacctctatgacggcaaagttggcaagttggacctgcctgaaccagttcaaggagggtggtttgaaggatcttctaaaggttggatgatcatggtcatggaaaaagatctagattctacaatgtttctagtaaatcccatttcaggagccctacaccaacttccatctttgagcacggttccatctttccaaaattttgtagaaacgaccagatggaaacgctatggtgcctcccgtttcagctattggcttgtgctgtccacctcggatatcacttcagagcaatgtatgatagcagctttctttggagacgctgaaacattgtgtttgtgcagacctggagacacgagttggagtatttgcaaggtactagatgctaatgaggtcattatggatttattgttttcttctggcaagctatatgccttggttcttaggcatgataaggaaggctttatgtcagctcctcgtactttaagttgtggaggtcatgccgtggaattatatctggtctatgatataatgccaaaattcagtgaccagaatgaagtatatggggactatatagtccaattaaaagcggcactagactcacatttgatagagtcagcaaccaatggtgaaatatatttgatccatcaaatgcaagataaatttatgaaattgtatgatgacgagaaccccgaggatggtggcggtggaggtcaaggtgaaggcggaggaaatgaggaggatgattatgttgaaggcggggatgatgacaatgactctgacaatgaggaacatgacgacttggaagataatgaggatggaggagatgatatccatgacatggatgacgacaatgaggaacatgacaacttggaagataatgaggatagaggagatggtatcactagagttgaggaagaagaacgtgaccttaatgtatatttgaggacaagtgctttttatgtttacaagcttcacccaaagaagaagaagattgttagtgcacggtgcctggaggatcaagtattgttcttgtcgggcgcgggtcaattgtcccttcctgcacgagagatcaacaagttggaaggaaattgtatttattttgcaacaaataatcactcgactttacatcagcgagaatatataaatcgagagcttggcatattcaacttggatgatagaagagttaagcgatctttcccaagcgttagggtgcatcctgcaattaaccagccaactgcaccaccagttgaggaagatttagagctggtcaaggctattgatgcctccattcagtcttctttgcaggagaggccgcccttgtctgatgcactccggatccattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

801

Amino Acids

90.09

Weight (kDa)

5.03

Isoelectric Point (pI)

50.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 329
AasI GACNNNNNNGTC 1 cut(s) 1634
Acc16I TGCGCA 1 cut(s) 989
Acc36I ACCTGC 1 cut(s) 1110
AccB1I GGYRCC 3 cut(s) 445, 1295, 2067
AccB7I CCANNNNNTGG 1 cut(s) 1900
AccI GTMKAC 1 cut(s) 943
AccII CGCG 1 cut(s) 2102
AccIII TCCGGA 1 cut(s) 2394
AclWI GGATC 8 cut(s) 536, 540, 866, 1144, 1696, 2085, 2392, 2405
AcsI RAATTY 4 cut(s) 115, 1261, 1598, 1721
AcuI CTGAAG 3 cut(s) 302, 629, 1329
AfaI GTAC 3 cut(s) 933, 1437, 1540
AfiI CCNNNNNNNGG 9 cut(s) 255, 269, 331, 505, 644, 1118, 1211, 1757, 1900
AgsI TTSAA 5 cut(s) 598, 1118, 1133, 1814, 2227
AjnI CCWGG 4 cut(s) 824, 1022, 1405, 2070
AleI CACNNNNGTG 1 cut(s) 927
Alw21I GWGCWC 3 cut(s) 1009, 1244, 2065
Alw26I GTCTC 5 cut(s) 606, 697, 749, 1371, 1404
Alw44I GTGCAC 1 cut(s) 2061
AlwI GGATC 8 cut(s) 536, 540, 866, 1144, 1696, 2085, 2392, 2405
Ama87I CYCGRG 1 cut(s) 1751
Aor13HI TCCGGA 1 cut(s) 2394
AoxI GGCC 3 cut(s) 222, 686, 2372
ApaLI GTGCAC 1 cut(s) 2061
ApeKI GCWGC 1 cut(s) 1364
ApoI RAATTY 4 cut(s) 115, 1261, 1598, 1721
Asp700I GAANNNNTTC 1 cut(s) 1113
AspLEI GCGC 2 cut(s) 990, 2102
AspS9I GGNCC 5 cut(s) 223, 322, 344, 496, 1099
AsuHPI GGTGA 5 cut(s) 627, 808, 1700, 1790, 2027
AvaI CYCGRG 1 cut(s) 1751
AvaII GGWCC 4 cut(s) 322, 344, 496, 1099
BaeGI GKGCMC 2 cut(s) 448, 2065
BamHI GGATCC 1 cut(s) 2397
BanI GGYRCC 3 cut(s) 445, 1295, 2067
BanII GRGCYC 1 cut(s) 1219
BauI CACGAG 2 cut(s) 1414, 2124
BbsI GAAGAC 1 cut(s) 2349
Bbv12I GWGCWC 3 cut(s) 1009, 1244, 2065
BbvI GCAGC 1 cut(s) 1376
BccI CCATC 9 cut(s) 380, 904, 1240, 1258, 1275, 1713, 1751, 1871, 1949
BceAI ACGGC 2 cut(s) 1096, 1547
BciT130I CCWGG 4 cut(s) 826, 1024, 1407, 2072
BclI TGATCA 1 cut(s) 1155
BcoDI GTCTC 5 cut(s) 606, 697, 749, 1371, 1404
BfaI CTAG 7 cut(s) 761, 1002, 1178, 1196, 1439, 1655, 1965
BfuAI ACCTGC 1 cut(s) 1110
BglII AGATCT 2 cut(s) 670, 1174
BisI GCNGC 5 cut(s) 817, 920, 1365, 1650, 2375
BlsI GCNGC 5 cut(s) 818, 921, 1366, 1651, 2376
Bme1390I CCNGG 4 cut(s) 826, 1024, 1407, 2072
Bme18I GGWCC 4 cut(s) 322, 344, 496, 1099
BmeT110I CYCGRG 1 cut(s) 1751
BmgT120I GGNCC 5 cut(s) 223, 322, 344, 496, 1099
BmiI GGNNCC 9 cut(s) 45, 225, 447, 497, 1216, 1248, 1297, 2069, 2399
BmrFI CCNGG 4 cut(s) 826, 1024, 1407, 2072
BmsI GCATC 6 cut(s) 244, 249, 1432, 2284, 2332, 2377
BoxI GACNNNNGTC 1 cut(s) 761
BpiI GAAGAC 1 cut(s) 2349
BpmI CTGGAG 2 cut(s) 1428, 2093
Bpu10I CCTNAGC 1 cut(s) 639
BpuEI CTTGAG 1 cut(s) 1078
BsaAI YACGTR 1 cut(s) 935
BsaJI CCNNGG 7 cut(s) 824, 825, 1022, 1332, 1494, 1563, 1752
BsaWI WCCGGW 1 cut(s) 2394
BsaXI ACNNNNNCTCC 2 cut(s) 1002, 1032
Bsc4I CCNNNNNNNGG 9 cut(s) 255, 269, 331, 505, 644, 1118, 1211, 1757, 1900
Bse1I ACTGG 6 cut(s) 449, 545, 710, 733, 1112, 2306
Bse3DI GCAATG 1 cut(s) 1358
BseAI TCCGGA 1 cut(s) 2394
BseBI CCWGG 4 cut(s) 826, 1024, 1407, 2072
BseDI CCNNGG 7 cut(s) 824, 825, 1022, 1332, 1494, 1563, 1752
BseLI CCNNNNNNNGG 9 cut(s) 255, 269, 331, 505, 644, 1118, 1211, 1757, 1900
BseMI GCAATG 1 cut(s) 1358
BseMII CTCAG 4 cut(s) 408, 630, 744, 917
BseNI ACTGG 6 cut(s) 449, 545, 710, 733, 1112, 2306
BseRI GAGGAG 4 cut(s) 1524, 1811, 1896, 1965
BseSI GKGCMC 2 cut(s) 448, 2065
BseXI GCAGC 1 cut(s) 1376
BseYI CCCAGC 3 cut(s) 643, 875, 879
BsgI GTGCAG 3 cut(s) 1420, 2106, 2283
Bsh1236I CGCG 1 cut(s) 2102
BshFI GGCC 3 cut(s) 224, 688, 2374
BshNI GGYRCC 3 cut(s) 445, 1295, 2067
BsiHKAI GWGCWC 3 cut(s) 1009, 1244, 2065
BsiHKCI CYCGRG 1 cut(s) 1751
BsiSI CCGG 1 cut(s) 2395
BslFI GGGAC 5 cut(s) 365, 509, 660, 1640, 2098
BslI CCNNNNNNNGG 9 cut(s) 255, 269, 331, 505, 644, 1118, 1211, 1757, 1900
BsmAI GTCTC 5 cut(s) 606, 697, 749, 1371, 1404
BsmBI CGTCTC 1 cut(s) 1371
BsmFI GGGAC 5 cut(s) 365, 509, 660, 1640, 2098
BsnI GGCC 3 cut(s) 224, 688, 2374
BsoBI CYCGRG 1 cut(s) 1751
Bsp1286I GDGCHC 5 cut(s) 448, 1009, 1219, 1244, 2065
Bsp13I TCCGGA 1 cut(s) 2394
BspANI GGCC 3 cut(s) 224, 688, 2374
BspCNI CTCAG 4 cut(s) 409, 631, 745, 918
BspEI TCCGGA 1 cut(s) 2394
BspFNI CGCG 1 cut(s) 2102
BspLI GGNNCC 9 cut(s) 45, 225, 447, 497, 1216, 1248, 1297, 2069, 2399
BspMI ACCTGC 1 cut(s) 1110
BspPI GGATC 8 cut(s) 536, 540, 866, 1144, 1696, 2085, 2392, 2405
BspQI GCTCTTC 1 cut(s) 321
BspT107I GGYRCC 3 cut(s) 445, 1295, 2067
BsrDI GCAATG 1 cut(s) 1358
BsrI ACTGG 6 cut(s) 449, 545, 710, 733, 1112, 2306
BssECI CCNNGG 7 cut(s) 824, 825, 1022, 1332, 1494, 1563, 1752
BssNAI GTATAC 1 cut(s) 944
BssSI CACGAG 2 cut(s) 1414, 2124
BssT1I CCWWGG 1 cut(s) 1494
Bst1107I GTATAC 1 cut(s) 944
Bst2BI CACGAG 2 cut(s) 1414, 2124
Bst2UI CCWGG 4 cut(s) 826, 1024, 1407, 2072
Bst4CI ACNGT 7 cut(s) 76, 106, 341, 433, 979, 1246, 2067
Bst6I CTCTTC 2 cut(s) 321, 2236
BstAPI GCANNNNNTGC 2 cut(s) 241, 960
BstBAI YACGTR 1 cut(s) 935
BstC8I GCNNGC 4 cut(s) 123, 141, 195, 1484
BstDEI CTNAG 8 cut(s) 417, 500, 536, 639, 753, 778, 926, 1502
BstDSI CCRYGG 1 cut(s) 1563
BstENI CCTNNNNNAGG 2 cut(s) 329, 503
BstFNI CGCG 1 cut(s) 2102
BstHHI GCGC 2 cut(s) 990, 2102
BstMAI GTCTC 5 cut(s) 606, 697, 749, 1371, 1404
BstMWI GCNNNNNNNGC 8 cut(s) 221, 241, 694, 960, 1053, 1089, 2342, 2371
BstNI CCWGG 4 cut(s) 826, 1024, 1407, 2072
BstNSI RCATGY 2 cut(s) 143, 169
BstPAI GACNNNNGTC 1 cut(s) 761
BstSCI CCNGG 4 cut(s) 824, 1022, 1405, 2070
BstSLI GKGCMC 2 cut(s) 448, 2065
BstUI CGCG 1 cut(s) 2102
BstV1I GCAGC 1 cut(s) 1376
BstV2I GAAGAC 1 cut(s) 2349
BstX2I RGATCY 5 cut(s) 532, 670, 1136, 1174, 2397
BstYI RGATCY 5 cut(s) 532, 670, 1136, 1174, 2397
BstZ17I GTATAC 1 cut(s) 944
BsuRI GGCC 3 cut(s) 224, 688, 2374
BtgI CCRYGG 1 cut(s) 1563
BtsI GCAGTG 3 cut(s) 188, 579, 961
BtsIMutI CAGTG 5 cut(s) 188, 579, 703, 961, 1609
BveI ACCTGC 1 cut(s) 1110
Cac8I GCNNGC 4 cut(s) 123, 141, 195, 1484
CfoI GCGC 2 cut(s) 990, 2102
Cfr13I GGNCC 5 cut(s) 223, 322, 344, 496, 1099
CseI GACGC 1 cut(s) 1388
Csp6I GTAC 3 cut(s) 932, 1436, 1539
CspCI CAANNNNNGTGG 2 cut(s) 1106, 1141
CviQI GTAC 3 cut(s) 932, 1436, 1539
DdeI CTNAG 8 cut(s) 417, 500, 536, 639, 753, 778, 926, 1502
DrdI GACNNNNNNGTC 1 cut(s) 1634
DseDI GACNNNNNNGTC 1 cut(s) 1634
Eam1104I CTCTTC 2 cut(s) 321, 2236
EarI CTCTTC 2 cut(s) 321, 2236
EciI GGCGGA 1 cut(s) 1800
Eco130I CCWWGG 1 cut(s) 1494
Eco147I AGGCCT 1 cut(s) 688
Eco24I GRGCYC 1 cut(s) 1219
Eco32I GATATC 4 cut(s) 901, 997, 1339, 1891
Eco47I GGWCC 4 cut(s) 322, 344, 496, 1099
Eco57I CTGAAG 3 cut(s) 302, 629, 1329
Eco88I CYCGRG 1 cut(s) 1751
EcoNI CCTNNNNNAGG 2 cut(s) 329, 503
EcoO109I RGGNCCY 2 cut(s) 322, 496
EcoRII CCWGG 4 cut(s) 824, 1022, 1405, 2070
EcoRV GATATC 4 cut(s) 901, 997, 1339, 1891
EcoT14I CCWWGG 1 cut(s) 1494
EcoT22I ATGCAT 1 cut(s) 237
EcoT38I GRGCYC 1 cut(s) 1219
ErhI CCWWGG 1 cut(s) 1494
Esp3I CGTCTC 1 cut(s) 1371
FalI AAGNNNNNCTT 2 cut(s) 1505, 1537
FaqI GGGAC 5 cut(s) 365, 509, 660, 1640, 2098
FauI CCCGC 3 cut(s) 507, 1811, 2095
FbaI TGATCA 1 cut(s) 1155
FblI GTMKAC 1 cut(s) 943
Fnu4HI GCNGC 5 cut(s) 817, 920, 1365, 1650, 2375
FriOI GRGCYC 1 cut(s) 1219
Fsp4HI GCNGC 5 cut(s) 817, 920, 1365, 1650, 2375
FspBI CTAG 7 cut(s) 761, 1002, 1178, 1196, 1439, 1655, 1965
FspI TGCGCA 1 cut(s) 989
GlaI GCGC 2 cut(s) 989, 2101
GluI GCNGC 5 cut(s) 817, 920, 1365, 1650, 2375
GsaI CCCAGC 3 cut(s) 647, 879, 883
GsuI CTGGAG 2 cut(s) 1428, 2093
HaeIII GGCC 3 cut(s) 224, 688, 2374
HapII CCGG 1 cut(s) 2395
HgaI GACGC 1 cut(s) 1388
HhaI GCGC 2 cut(s) 990, 2102
Hin6I GCGC 2 cut(s) 988, 2100
HinP1I GCGC 2 cut(s) 988, 2100
HincII GTYRAC 1 cut(s) 358
HindII GTYRAC 1 cut(s) 358
HindIII AAGCTT 1 cut(s) 2030
HinfI GANTC 7 cut(s) 566, 757, 859, 1181, 1658, 1673, 1835
HpaII CCGG 1 cut(s) 2395
HphI GGTGA 5 cut(s) 627, 808, 1700, 1790, 2027
Hpy166II GTNNAC 9 cut(s) 344, 358, 411, 579, 932, 944, 1329, 2026, 2063
Hpy188III TCNNGA 6 cut(s) 320, 603, 1178, 1212, 2210, 2395
Hpy8I GTNNAC 9 cut(s) 344, 358, 411, 579, 932, 944, 1329, 2026, 2063
HpyAV CCTTC 9 cut(s) 25, 34, 607, 1127, 1511, 1775, 1808, 2126, 2138
HpyCH4III ACNGT 7 cut(s) 76, 106, 341, 433, 979, 1246, 2067
HpyCH4IV ACGT 3 cut(s) 201, 934, 1984
HpyF10VI GCNNNNNNNGC 8 cut(s) 221, 241, 694, 960, 1053, 1089, 2342, 2371
HpyF3I CTNAG 8 cut(s) 417, 500, 536, 639, 753, 778, 926, 1502
HpySE526I ACGT 3 cut(s) 201, 934, 1984
HspAI GCGC 2 cut(s) 988, 2100
Kpn2I TCCGGA 1 cut(s) 2394
Ksp22I TGATCA 1 cut(s) 1155
LguI GCTCTTC 1 cut(s) 321
LmnI GCTCC 3 cut(s) 1012, 1214, 1537
Lsp1109I GCAGC 1 cut(s) 1376
LweI GCATC 6 cut(s) 244, 249, 1432, 2284, 2332, 2377
MaeI CTAG 7 cut(s) 761, 1002, 1178, 1196, 1439, 1655, 1965
MaeII ACGT 3 cut(s) 201, 934, 1984
MaeIII GTNAC 5 cut(s) 76, 186, 713, 1604, 1985
MfeI CAATTG 1 cut(s) 2108
MflI RGATCY 5 cut(s) 532, 670, 1136, 1174, 2397
MhlI GDGCHC 5 cut(s) 448, 1009, 1219, 1244, 2065
MlyI GAGTC 5 cut(s) 751, 868, 1652, 1682, 1829
MmeI TCCRAC 5 cut(s) 392, 1077, 1130, 1400, 2121
Mph1103I ATGCAT 1 cut(s) 237
MroI TCCGGA 1 cut(s) 2394
MroXI GAANNNNTTC 1 cut(s) 1113
MslI CAYNNNNRTG 6 cut(s) 144, 278, 451, 908, 927, 1163
MspA1I CMGCKG 1 cut(s) 879
MspI CCGG 1 cut(s) 2395
MspR9I CCNGG 4 cut(s) 826, 1024, 1407, 2072
MunI CAATTG 1 cut(s) 2108
MvaI CCWGG 4 cut(s) 826, 1024, 1407, 2072
MvnI CGCG 1 cut(s) 2102
MwoI GCNNNNNNNGC 8 cut(s) 221, 241, 694, 960, 1053, 1089, 2342, 2371
NlaIV GGNNCC 9 cut(s) 45, 225, 447, 497, 1216, 1248, 1297, 2069, 2399
NmuCI GTSAC 5 cut(s) 76, 186, 713, 1604, 1985
NsbI TGCGCA 1 cut(s) 989
NsiI ATGCAT 1 cut(s) 237
NspI RCATGY 2 cut(s) 143, 169
OliI CACNNNNGTG 1 cut(s) 927
PaeI GCATGC 1 cut(s) 143
PasI CCCWGGG 1 cut(s) 825
PceI AGGCCT 1 cut(s) 688
PciSI GCTCTTC 1 cut(s) 321
PcsI WCGNNNNNNNCGW 1 cut(s) 1749
PdmI GAANNNNTTC 1 cut(s) 1113
PfeI GAWTC 2 cut(s) 566, 1181
PflMI CCANNNNNTGG 1 cut(s) 1900
PkrI GCNGC 5 cut(s) 818, 921, 1366, 1651, 2376
PleI GAGTC 5 cut(s) 751, 867, 1652, 1681, 1829
PpsI GAGTC 5 cut(s) 751, 867, 1652, 1681, 1829
Ppu21I YACGTR 1 cut(s) 935
PpuMI RGGWCCY 2 cut(s) 322, 496
PshAI GACNNNNGTC 1 cut(s) 761
PsiI TTATAA 1 cut(s) 329
Psp5II RGGWCCY 2 cut(s) 322, 496
Psp6I CCWGG 4 cut(s) 824, 1022, 1405, 2070
PspFI CCCAGC 3 cut(s) 643, 875, 879
PspGI CCWGG 4 cut(s) 824, 1022, 1405, 2070
PspN4I GGNNCC 9 cut(s) 45, 225, 447, 497, 1216, 1248, 1297, 2069, 2399
PspPI GGNCC 5 cut(s) 223, 322, 344, 496, 1099
PspPPI RGGWCCY 2 cut(s) 322, 496
PsuI RGATCY 5 cut(s) 532, 670, 1136, 1174, 2397
PvuII CAGCTG 1 cut(s) 879
RsaI GTAC 3 cut(s) 933, 1437, 1540
RsaNI GTAC 3 cut(s) 932, 1436, 1539
RseI CAYNNNNRTG 6 cut(s) 144, 278, 451, 908, 927, 1163
SapI GCTCTTC 1 cut(s) 321
SatI GCNGC 5 cut(s) 817, 920, 1365, 1650, 2375
Sau96I GGNCC 5 cut(s) 223, 322, 344, 496, 1099
SchI GAGTC 5 cut(s) 751, 868, 1652, 1682, 1829
ScrFI CCNGG 4 cut(s) 826, 1024, 1407, 2072
SduI GDGCHC 5 cut(s) 448, 1009, 1219, 1244, 2065
SfaNI GCATC 6 cut(s) 244, 249, 1432, 2284, 2332, 2377
SinI GGWCC 4 cut(s) 322, 344, 496, 1099
SmiMI CAYNNNNRTG 6 cut(s) 144, 278, 451, 908, 927, 1163
SmlI CTYRAG 1 cut(s) 1057
SmoI CTYRAG 1 cut(s) 1057
SphI GCATGC 1 cut(s) 143
SseBI AGGCCT 1 cut(s) 688
SspMI CTAG 7 cut(s) 761, 1002, 1178, 1196, 1439, 1655, 1965
StuI AGGCCT 1 cut(s) 688
StyD4I CCNGG 4 cut(s) 824, 1022, 1405, 2070
StyI CCWWGG 1 cut(s) 1494
TaaI ACNGT 7 cut(s) 76, 106, 341, 433, 979, 1246, 2067
TaiI ACGT 3 cut(s) 204, 937, 1987
TaqI TCGA 4 cut(s) 564, 604, 2180, 2209
TauI GCSGC 4 cut(s) 819, 922, 1652, 2377
TfiI GAWTC 2 cut(s) 566, 1181
TscAI CASTG 5 cut(s) 195, 586, 710, 961, 1609
TseFI GTSAC 5 cut(s) 76, 186, 713, 1604, 1985
TseI GCWGC 1 cut(s) 1364
Tsp45I GTSAC 5 cut(s) 76, 186, 713, 1604, 1985
TspDTI ATGAA 6 cut(s) 296, 353, 495, 881, 1629, 1742
TspRI CASTG 5 cut(s) 195, 586, 710, 961, 1609
Van91I CCANNNNNTGG 1 cut(s) 1900
VneI GTGCAC 1 cut(s) 2061
VpaK11BI GGWCC 4 cut(s) 322, 344, 496, 1099
XagI CCTNNNNNAGG 2 cut(s) 329, 503
XapI RAATTY 4 cut(s) 115, 1261, 1598, 1721
XbaI TCTAGA 1 cut(s) 1177
XceI RCATGY 2 cut(s) 143, 169
XmiI GTMKAC 1 cut(s) 943
XmnI GAANNNNTTC 1 cut(s) 1113
XspI CTAG 7 cut(s) 761, 1002, 1178, 1196, 1439, 1655, 1965
Zsp2I ATGCAT 1 cut(s) 237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.