Rorug05G0546700

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000144
Physical Location & Seq
Reverse (-)
73566465 .. 73568646
2182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0546700.1

Sequence Viewer

Length: 1488 bp
ATGGAAGAGGGATGGAAGAGAAATCGTTATCTTTCCCGAAGCAGAAATGATGCGCTCTGCGCTATTGAGACGCAAACAGGAGGTCATGACCGGAAGCGGAAGAACGAAAACCATAATGTAGAAAAGAAGGGAACCGACTCCGCTGTTGTATTATCAAGTGGGTCAGGCATTGATGATTGTATGACATTACCCGGTGGTAAGGAAGAATCAGACAGTCAGGTTACAATCAGGACAGCATGCCGAGGAAAACACTTCACAAAAACTATGTCTTCCCTATCAGCTGGAAAGTTAGTTGCAACAATAGAAATGGGGTTTGGGTCACTTTATGAATTTCGCTGTACGAAAGTGAATCTCCCACTTTGCCAAGTGCTGGTTGAAAATTTTGACGTGGCGAACTCAAGCATCAAGATTCATGGAAGGAACCTGACAATCACACATGAAGACTTTGAACGCATAATGGGCGTTAGGAATGGAGGTTGTGATGTGGAGGTTGAAGGAAACACCGAGGACCCTGATATATTGGCCCTGGAGAGGAAGATTTCGGGGAAGGAGAATCAGATAACAATACATCGATTGAGGAGGGTGCTGATTGAGTCTGAAAGCGCTGATGAGACATTTAGGATCAACTTTGCCTTGTATGCCCTTGCAACCCTGCTATCTCCGGTAACAGGAATCCATGTCGAACGAAGATATCTTATACCACTTAAGGAACCAAATGGCCTGTGTTCAAAAAACTGGGCAAAGTTTGCATTTGATAAGCTCGTTGAAGGGGTGTCATTGTTTCAGGGCACGGGGATTGGATTGGTCGGAGACGGTGAAACCTATTATGATATGGGGCGCAGACGAGGGAAGAAAATTTATGAGCAGGTGGAGAGCATGGGGGGATGGAAAAGTGAGTCTGTTTATGTGACAAAGAGGTATTTGTGGGGCAGAACAAATCAGTACAGTGGATCGGTTGATGCCAGCACAGGGATAAAAACCAATGTAGTGGAAGACTTGTCAGAAGTGATGTCTGATGTGGGTGTCGTTAAAGGGGACATCAGGAATCTAAAGTCAATGGTCGGTCAATTGGGACCAGATATGTGCCGTTTGAGGAGCGCAATTATGACGTTAGAAACATCTCTTGAGCAGCTGAAGGCTGAGGGCCTCTCTCAGCTTGTTTCAGACACTATCATGGGAGTGTTTGAGGATAAGCAGAATGATTATGTGGGCAATGATGGGACTGATGTTTTTGTTGATGGTCAAAAGCAGCATGGTCCAGAATTTGAGTCAGATGACGATGGGATGCCTAATGCTAAATCCAAAATTGTCATTTCCAATGAGGTGGTAGCATACCGGGATCGCAGCACTGAGGTTGAGAGAAATGAACAGACGAGGTTTGAAGCGGTGGCCGAAATTTCAGAGAGGGATCGATGCATACTTATTGGCATATCTCTTCAGCAAGAAGGTTTCTGCGGACGACAGTTTTGGGAGCAACGAAGTTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

495

Amino Acids

55.25

Weight (kDa)

5.47

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 856
Acc36I ACCTGC 1 cut(s) 856
AccB7I CCANNNNNTGG 1 cut(s) 370
AciI CCGC 4 cut(s) 97, 141, 1385, 1455
AclWI GGATC 4 cut(s) 629, 958, 1347, 1416
AcoI YGGCCR 1 cut(s) 1389
AcsI RAATTY 5 cut(s) 329, 379, 855, 1262, 1395
AcuI CTGAAG 2 cut(s) 1154, 1421
AfaI GTAC 2 cut(s) 340, 944
AfeI AGCGCT 1 cut(s) 604
AfiI CCNNNNNNNGG 4 cut(s) 370, 531, 668, 969
AflII CTTAAG 1 cut(s) 704
AgsI TTSAA 6 cut(s) 377, 449, 494, 729, 767, 1382
AjiI CACGTC 1 cut(s) 388
AjnI CCWGG 1 cut(s) 525
AjuI GAANNNNNNNTTGG 2 cut(s) 297, 329
AluBI AGCT 4 cut(s) 281, 760, 1132, 1156
AluI AGCT 4 cut(s) 281, 760, 1132, 1156
Alw26I GTCTC 3 cut(s) 62, 605, 804
AlwI GGATC 4 cut(s) 629, 958, 1347, 1416
Aor51HI AGCGCT 1 cut(s) 604
AoxI GGCC 4 cut(s) 522, 718, 1144, 1389
ApeKI GCWGC 3 cut(s) 1129, 1249, 1344
ApoI RAATTY 5 cut(s) 329, 379, 855, 1262, 1395
ArsI GACNNNNNNTTYG 6 cut(s) 67, 99, 251, 283, 1449, 1481
AspLEI GCGC 5 cut(s) 55, 62, 605, 840, 1100
AspS9I GGNCC 5 cut(s) 508, 523, 1073, 1144, 1256
AsuC2I CCSGG 2 cut(s) 192, 1337
AsuHPI GGTGA 1 cut(s) 827
AvaII GGWCC 3 cut(s) 508, 1073, 1256
BaeGI GKGCMC 1 cut(s) 791
BbsI GAAGAC 3 cut(s) 261, 447, 999
BbvCI CCTCAGC 1 cut(s) 1140
BbvI GCAGC 3 cut(s) 1141, 1261, 1356
BccI CCATC 5 cut(s) 6, 879, 1211, 1232, 1274
BceAI ACGGC 1 cut(s) 1071
BciT130I CCWGG 1 cut(s) 527
BcnI CCSGG 2 cut(s) 192, 1337
BcoDI GTCTC 3 cut(s) 62, 605, 804
BfaI CTAG 1 cut(s) 1486
BfoI RGCGCY 1 cut(s) 606
BfrI CTTAAG 1 cut(s) 704
BfuAI ACCTGC 1 cut(s) 856
BisI GCNGC 3 cut(s) 1130, 1250, 1345
BlsI GCNGC 3 cut(s) 1131, 1251, 1346
Bme1390I CCNGG 3 cut(s) 192, 527, 1337
Bme18I GGWCC 3 cut(s) 508, 1073, 1256
BmgBI CACGTC 1 cut(s) 388
BmgT120I GGNCC 5 cut(s) 508, 523, 1073, 1144, 1256
BmiI GGNNCC 5 cut(s) 133, 422, 510, 711, 1074
BmrFI CCNGG 3 cut(s) 192, 527, 1337
BmrI ACTGGG 1 cut(s) 745
BmsI GCATC 5 cut(s) 40, 411, 949, 1275, 1403
BmuI ACTGGG 1 cut(s) 745
BpiI GAAGAC 3 cut(s) 261, 447, 999
BplI GAGNNNNNCTC 2 cut(s) 1133, 1165
BpmI CTGGAG 1 cut(s) 548
Bpu10I CCTNAGC 1 cut(s) 1140
BpuEI CTTGAG 2 cut(s) 382, 1145
BpuMI CCSGG 2 cut(s) 192, 1337
Bsa29I ATCGAT 2 cut(s) 571, 1411
BsaJI CCNNGG 3 cut(s) 241, 504, 525
BsaWI WCCGGW 2 cut(s) 90, 661
Bsc4I CCNNNNNNNGG 4 cut(s) 370, 531, 668, 969
Bse1I ACTGG 1 cut(s) 740
Bse3DI GCAATG 1 cut(s) 1219
BseBI CCWGG 1 cut(s) 527
BseCI ATCGAT 2 cut(s) 571, 1411
BseDI CCNNGG 3 cut(s) 241, 504, 525
BseGI GGATG 3 cut(s) 17, 890, 1290
BseLI CCNNNNNNNGG 4 cut(s) 370, 531, 668, 969
BseMI GCAATG 1 cut(s) 1219
BseMII CTCAG 3 cut(s) 1131, 1166, 1341
BseNI ACTGG 1 cut(s) 740
BseRI GAGGAG 2 cut(s) 592, 1108
BseSI GKGCMC 1 cut(s) 791
BseXI GCAGC 3 cut(s) 1141, 1261, 1356
BshFI GGCC 4 cut(s) 524, 720, 1146, 1391
BshVI ATCGAT 2 cut(s) 571, 1411
BsiSI CCGG 4 cut(s) 91, 192, 662, 1336
BslFI GGGAC 3 cut(s) 1049, 1086, 1234
BslI CCNNNNNNNGG 4 cut(s) 370, 531, 668, 969
BsmAI GTCTC 3 cut(s) 62, 605, 804
BsmBI CGTCTC 2 cut(s) 62, 804
BsmFI GGGAC 3 cut(s) 1049, 1086, 1234
BsnI GGCC 4 cut(s) 524, 720, 1146, 1391
Bsp1286I GDGCHC 1 cut(s) 791
Bsp143I GATC 4 cut(s) 621, 950, 1339, 1408
BspACI CCGC 4 cut(s) 97, 141, 1385, 1455
BspANI GGCC 4 cut(s) 524, 720, 1146, 1391
BspCNI CTCAG 3 cut(s) 1132, 1165, 1342
BspDI ATCGAT 2 cut(s) 571, 1411
BspHI TCATGA 1 cut(s) 85
BspLI GGNNCC 5 cut(s) 133, 422, 510, 711, 1074
BspMI ACCTGC 1 cut(s) 856
BspPI GGATC 4 cut(s) 629, 958, 1347, 1416
BspTI CTTAAG 1 cut(s) 704
BsrDI GCAATG 1 cut(s) 1219
BsrI ACTGG 1 cut(s) 740
BssECI CCNNGG 3 cut(s) 241, 504, 525
BssMI GATC 4 cut(s) 621, 950, 1339, 1408
Bst2UI CCWGG 1 cut(s) 527
Bst4CI ACNGT 4 cut(s) 215, 815, 947, 1464
Bst6I CTCTTC 2 cut(s) 11, 1440
BstAFI CTTAAG 1 cut(s) 704
BstAPI GCANNNNNTGC 1 cut(s) 746
BstC8I GCNNGC 2 cut(s) 238, 964
BstDEI CTNAG 3 cut(s) 1140, 1152, 1350
BstF5I GGATG 3 cut(s) 17, 890, 1290
BstH2I RGCGCY 1 cut(s) 606
BstHHI GCGC 5 cut(s) 55, 62, 605, 840, 1100
BstKTI GATC 4 cut(s) 624, 953, 1342, 1411
BstMAI GTCTC 3 cut(s) 62, 605, 804
BstMBI GATC 4 cut(s) 621, 950, 1339, 1408
BstMWI GCNNNNNNNGC 4 cut(s) 59, 459, 638, 746
BstNI CCWGG 1 cut(s) 527
BstNSI RCATGY 1 cut(s) 240
BstSCI CCNGG 3 cut(s) 190, 525, 1335
BstSLI GKGCMC 1 cut(s) 791
BstV1I GCAGC 3 cut(s) 1141, 1261, 1356
BstV2I GAAGAC 3 cut(s) 261, 447, 999
BstXI CCANNNNNNTGG 2 cut(s) 988, 1324
Bsu15I ATCGAT 2 cut(s) 571, 1411
BsuRI GGCC 4 cut(s) 524, 720, 1146, 1391
BsuTUI ATCGAT 2 cut(s) 571, 1411
BtrI CACGTC 1 cut(s) 388
BtsCI GGATG 3 cut(s) 17, 890, 1290
BtsIMutI CAGTG 2 cut(s) 952, 1347
BveI ACCTGC 1 cut(s) 856
Cac8I GCNNGC 2 cut(s) 238, 964
CciI TCATGA 1 cut(s) 85
CfoI GCGC 5 cut(s) 55, 62, 605, 840, 1100
Cfr13I GGNCC 5 cut(s) 508, 523, 1073, 1144, 1256
ClaI ATCGAT 2 cut(s) 571, 1411
CseI GACGC 1 cut(s) 79
Csp6I GTAC 2 cut(s) 339, 943
CviAII CATG 8 cut(s) 86, 237, 413, 437, 677, 877, 1174, 1253
CviJI RGCY 9 cut(s) 281, 524, 720, 760, 1132, 1139, 1146, 1156, 1391
CviKI_1 RGCY 9 cut(s) 281, 524, 720, 760, 1132, 1139, 1146, 1156, 1391
CviQI GTAC 2 cut(s) 339, 943
DdeI CTNAG 3 cut(s) 1140, 1152, 1350
DpnI GATC 4 cut(s) 623, 952, 1341, 1410
DpnII GATC 4 cut(s) 621, 950, 1339, 1408
EaeI YGGCCR 1 cut(s) 1389
Eam1104I CTCTTC 2 cut(s) 11, 1440
EarI CTCTTC 2 cut(s) 11, 1440
Eco32I GATATC 1 cut(s) 692
Eco47I GGWCC 3 cut(s) 508, 1073, 1256
Eco47III AGCGCT 1 cut(s) 604
Eco57I CTGAAG 2 cut(s) 1154, 1421
EcoO109I RGGNCCY 2 cut(s) 508, 1144
EcoRII CCWGG 1 cut(s) 525
EcoRV GATATC 1 cut(s) 692
EcoT22I ATGCAT 1 cut(s) 1418
Esp3I CGTCTC 2 cut(s) 62, 804
FaeI CATG 8 cut(s) 89, 240, 416, 440, 680, 880, 1177, 1256
FaqI GGGAC 3 cut(s) 1049, 1086, 1234
FatI CATG 8 cut(s) 85, 236, 412, 436, 676, 876, 1173, 1252
Fnu4HI GCNGC 3 cut(s) 1130, 1250, 1345
FokI GGATG 3 cut(s) 24, 897, 1297
Fsp4HI GCNGC 3 cut(s) 1130, 1250, 1345
FspBI CTAG 1 cut(s) 1486
GlaI GCGC 5 cut(s) 54, 61, 604, 839, 1099
GluI GCNGC 3 cut(s) 1130, 1250, 1345
GsuI CTGGAG 1 cut(s) 548
HaeII RGCGCY 1 cut(s) 606
HaeIII GGCC 4 cut(s) 524, 720, 1146, 1391
HapII CCGG 4 cut(s) 91, 192, 662, 1336
HgaI GACGC 1 cut(s) 79
HhaI GCGC 5 cut(s) 55, 62, 605, 840, 1100
Hin1II CATG 8 cut(s) 89, 240, 416, 440, 680, 880, 1177, 1256
Hin6I GCGC 5 cut(s) 53, 60, 603, 838, 1098
HinP1I GCGC 5 cut(s) 53, 60, 603, 838, 1098
HpaII CCGG 4 cut(s) 91, 192, 662, 1336
HphI GGTGA 1 cut(s) 827
Hpy188I TCNGA 9 cut(s) 211, 558, 598, 809, 1003, 1015, 1165, 1273, 1402
Hpy188III TCNNGA 7 cut(s) 36, 86, 229, 406, 1042, 1124, 1259
HpyAV CCTTC 7 cut(s) 121, 411, 488, 541, 761, 1129, 1439
HpyCH4III ACNGT 4 cut(s) 215, 815, 947, 1464
HpyCH4IV ACGT 2 cut(s) 387, 1109
HpyCH4V TGCA 4 cut(s) 296, 647, 749, 1416
HpyF10VI GCNNNNNNNGC 4 cut(s) 59, 459, 638, 746
HpyF3I CTNAG 3 cut(s) 1140, 1152, 1350
HpySE526I ACGT 2 cut(s) 387, 1109
Hsp92II CATG 8 cut(s) 89, 240, 416, 440, 680, 880, 1177, 1256
HspAI GCGC 5 cut(s) 53, 60, 603, 838, 1098
Kzo9I GATC 4 cut(s) 621, 950, 1339, 1408
LmnI GCTCC 2 cut(s) 1095, 1471
Lsp1109I GCAGC 3 cut(s) 1141, 1261, 1356
LweI GCATC 5 cut(s) 40, 411, 949, 1275, 1403
MaeI CTAG 1 cut(s) 1486
MaeII ACGT 2 cut(s) 387, 1109
MaeIII GTNAC 4 cut(s) 220, 318, 664, 907
MalI GATC 4 cut(s) 623, 952, 1341, 1410
MboI GATC 4 cut(s) 621, 950, 1339, 1408
MfeI CAATTG 1 cut(s) 1067
MhlI GDGCHC 1 cut(s) 791
MluCI AATT 8 cut(s) 329, 379, 855, 1067, 1101, 1262, 1305, 1395
MlyI GAGTC 4 cut(s) 131, 602, 905, 1277
MmeI TCCRAC 1 cut(s) 787
Mph1103I ATGCAT 1 cut(s) 1418
MseI TTAA 2 cut(s) 705, 1029
MslI CAYNNNNRTG 2 cut(s) 1172, 1178
MspA1I CMGCKG 3 cut(s) 143, 281, 1132
MspCI CTTAAG 1 cut(s) 704
MspI CCGG 4 cut(s) 91, 192, 662, 1336
MspR9I CCNGG 3 cut(s) 192, 527, 1337
MunI CAATTG 1 cut(s) 1067
MvaI CCWGG 1 cut(s) 527
MwoI GCNNNNNNNGC 4 cut(s) 59, 459, 638, 746
NciI CCSGG 2 cut(s) 192, 1337
NdeII GATC 4 cut(s) 621, 950, 1339, 1408
NlaIII CATG 8 cut(s) 89, 240, 416, 440, 680, 880, 1177, 1256
NlaIV GGNNCC 5 cut(s) 133, 422, 510, 711, 1074
NmeAIII GCCGAG 1 cut(s) 266
NmuCI GTSAC 2 cut(s) 318, 907
NsiI ATGCAT 1 cut(s) 1418
NspI RCATGY 1 cut(s) 240
PaeI GCATGC 1 cut(s) 240
PagI TCATGA 1 cut(s) 85
PaqCI CACCTGC 1 cut(s) 856
PfeI GAWTC 6 cut(s) 206, 349, 409, 553, 672, 1045
PflMI CCANNNNNTGG 1 cut(s) 370
PkrI GCNGC 3 cut(s) 1131, 1251, 1346
PleI GAGTC 4 cut(s) 131, 601, 904, 1276
PpsI GAGTC 4 cut(s) 131, 601, 904, 1276
PpuMI RGGWCCY 1 cut(s) 508
Psp5II RGGWCCY 1 cut(s) 508
Psp6I CCWGG 1 cut(s) 525
PspGI CCWGG 1 cut(s) 525
PspN4I GGNNCC 5 cut(s) 133, 422, 510, 711, 1074
PspPI GGNCC 5 cut(s) 508, 523, 1073, 1144, 1256
PspPPI RGGWCCY 1 cut(s) 508
PvuII CAGCTG 2 cut(s) 281, 1132
RsaI GTAC 2 cut(s) 340, 944
RsaNI GTAC 2 cut(s) 339, 943
RseI CAYNNNNRTG 2 cut(s) 1172, 1178
SaqAI TTAA 2 cut(s) 705, 1029
SatI GCNGC 3 cut(s) 1130, 1250, 1345
Sau3AI GATC 4 cut(s) 621, 950, 1339, 1408
Sau96I GGNCC 5 cut(s) 508, 523, 1073, 1144, 1256
SchI GAGTC 4 cut(s) 131, 602, 905, 1277
ScrFI CCNGG 3 cut(s) 192, 527, 1337
SduI GDGCHC 1 cut(s) 791
SfaNI GCATC 5 cut(s) 40, 411, 949, 1275, 1403
SinI GGWCC 3 cut(s) 508, 1073, 1256
SmiMI CAYNNNNRTG 2 cut(s) 1172, 1178
SmlI CTYRAG 3 cut(s) 397, 704, 1124
SmoI CTYRAG 3 cut(s) 397, 704, 1124
SphI GCATGC 1 cut(s) 240
Sse9I AATT 8 cut(s) 329, 379, 855, 1067, 1101, 1262, 1305, 1395
SsiI CCGC 4 cut(s) 97, 141, 1385, 1455
SspMI CTAG 1 cut(s) 1486
StyD4I CCNGG 3 cut(s) 190, 525, 1335
TaaI ACNGT 4 cut(s) 215, 815, 947, 1464
TaiI ACGT 2 cut(s) 390, 1112
TaqI TCGA 3 cut(s) 571, 681, 1411
TaqII GACCGA 1 cut(s) 1052
TasI AATT 8 cut(s) 329, 379, 855, 1067, 1101, 1262, 1305, 1395
TatI WGTACW 1 cut(s) 942
TfiI GAWTC 6 cut(s) 206, 349, 409, 553, 672, 1045
Tru1I TTAA 2 cut(s) 705, 1029
Tru9I TTAA 2 cut(s) 705, 1029
TscAI CASTG 2 cut(s) 952, 1354
TseFI GTSAC 2 cut(s) 318, 907
TseI GCWGC 3 cut(s) 1129, 1249, 1344
Tsp45I GTSAC 2 cut(s) 318, 907
TspDTI ATGAA 4 cut(s) 342, 401, 453, 1380
TspRI CASTG 2 cut(s) 952, 1354
Van91I CCANNNNNTGG 1 cut(s) 370
Vha464I CTTAAG 1 cut(s) 704
VpaK11BI GGWCC 3 cut(s) 508, 1073, 1256
XapI RAATTY 5 cut(s) 329, 379, 855, 1262, 1395
XceI RCATGY 1 cut(s) 240
XspI CTAG 1 cut(s) 1486
Zsp2I ATGCAT 1 cut(s) 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.