RLG00000003556

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000144
Physical Location & Seq
Forward (+)
49973177 .. 49974717
1541 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003556

Sequence Viewer

Length: 1389 bp
ATGAGCAGCAACCCAACTCGTTTCCGGAGTTGGCAAGAGCCACCACCAGATATTATGGAGAAGATTATACAGCGTCTCGACATAACCGATCGAATACGTTTAAGATTTGTTTGTGAGTCTTGGAGGTCAGTTGCTAGGCGAAGAGACATCCGTGGTGCTCCGCAGCTCCCCTGGTTAGTACACCCTCATAACCCTAGGTCCAAGTACTTGATATTGTCTAGCCTCACTAATGGTCAAGTTCACAAGTTGAGGCTCCCTCCAGGAGGGTGGTGGTTTTATGGTTCCTCTAAAGGAAAAGGACTAAACGCTGAGATACTTGTACTAAACCCGATTTCTGGAGCCCAGCACAAGGTTCCATCTTTCCATGATGAGTCTGTAGTAATTGATCATGAAGCTGATTCTTTCCTTGAAAATATTGAATTATCTAGCGCAAACGAGTCCGAATGTATGGTGGCTGCAGTTTTTAAGTGGTATATTATAAATATACTGTTTTCATGTGGCAAATTATATGCCGTGCTCCATGGTGATGACGGTAACATGGAAGATGAGAGTTTGAATTTTGGAAATAATGTAGTAGAAGTGAAGTTCGTCTTTGACAGTTTTGAAAATTTATTGAATAACCCCGAGTTTATTGTACCAGAGATTTATCCCGACTCTACGATCTTGCGGAATAGTGAAGTGAACTCATATTTGTTAGAATCAGCGAACAATGAAGTTTTGTTGATCCATCAAATTTATGATCGAAAAACAATGTATGTGGGTGAGGAAGATGATCTAATTCACATCTGCATTATCATCCACATCATCAGCATTCTGTTATGGCAGATGGGCCTTATGATTGAACTCAATTCTTTTACTGTTGCTGATGCCCTTGATGATAAGGGTGGTGATGGAGGAAACAACAACAATGAACAATTAAAAGGAGATGACGACGATGAAGCGGATGGTGCACCAGTAGGTGACGACGACAATGAGGATGGTGAGAGTGATGAGGAAGTTGACGACAGCGACGAAGAAGATGAGGGCGGTGTGGAAGGTGATAGAGATCTAGGTTACGAAGGACAGAATGTGTACTTTAGAACAAGTGGTTTTAGGGTATACAAGATTGGCTCGGGCAACAACTTTGATAGGGTACAAAGTTTGGGGGATCAAATATTATTATTGGCAGACCAAGGTTCTTCCTTGTGCCTCTCAGCAAATGACTTCGAAGGCTTAGATGGGAATTGCATTTATTTTGCGTCAAACGGAATGCGTAGGCTACATCCTTTGGAAACACTCAAACCAAATATGAATTATGATCTTAGTGTCTTCTGCTTAGATGATGAAAAAATTGAGCCATTTTTTCCAGGTTTTGACATGCAAATGCGTTTCTTCATTCCATGTTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

463

Amino Acids

52.24

Weight (kDa)

4.4

Isoelectric Point (pI)

48.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 49 5.6e-09 F-box domain
Beta-prop_KIB1-4 PF03478 359 - 415 4.1e-12 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 479, 1387
AccI GTMKAC 1 cut(s) 1098
AccIII TCCGGA 1 cut(s) 24
AciI CCGC 4 cut(s) 161, 667, 941, 1026
AclWI GGATC 2 cut(s) 718, 1155
AcsI RAATTY 3 cut(s) 556, 607, 732
AfaI GTAC 6 cut(s) 180, 206, 321, 636, 1073, 1134
AfiI CCNNNNNNNGG 3 cut(s) 263, 335, 349
AgsI TTSAA 6 cut(s) 410, 419, 556, 605, 616, 842
AjnI CCWGG 3 cut(s) 170, 259, 1345
AluBI AGCT 2 cut(s) 166, 395
AluI AGCT 2 cut(s) 166, 395
Alw21I GWGCWC 3 cut(s) 160, 519, 952
Alw26I GTCTC 2 cut(s) 80, 138
Alw44I GTGCAC 1 cut(s) 948
AlwI GGATC 2 cut(s) 718, 1155
Ama87I CYCGRG 2 cut(s) 623, 1111
Aor13HI TCCGGA 1 cut(s) 24
AoxI GGCC 1 cut(s) 829
ApaLI GTGCAC 1 cut(s) 948
ApeKI GCWGC 3 cut(s) 6, 163, 455
ApoI RAATTY 3 cut(s) 556, 607, 732
AspA2I CCTAGG 1 cut(s) 194
AspLEI GCGC 1 cut(s) 431
AspS9I GGNCC 2 cut(s) 198, 829
AsuHPI GGTGA 6 cut(s) 536, 773, 899, 971, 992, 1049
AsuII TTCGAA 1 cut(s) 1206
AvaI CYCGRG 2 cut(s) 623, 1111
AvaII GGWCC 1 cut(s) 198
AvrII CCTAGG 1 cut(s) 194
BaeGI GKGCMC 1 cut(s) 952
BanII GRGCYC 1 cut(s) 343
BbsI GAAGAC 1 cut(s) 1300
Bbv12I GWGCWC 3 cut(s) 160, 519, 952
BbvI GCAGC 3 cut(s) 18, 175, 442
BccI CCATC 7 cut(s) 364, 735, 820, 884, 938, 971, 1211
BceAI ACGGC 1 cut(s) 497
BciT130I CCWGG 3 cut(s) 172, 261, 1347
BclI TGATCA 1 cut(s) 385
BcoDI GTCTC 2 cut(s) 80, 138
BfaI CTAG 5 cut(s) 135, 195, 219, 426, 1049
BfmI CTRYAG 2 cut(s) 375, 456
BglII AGATCT 1 cut(s) 1045
BisI GCNGC 3 cut(s) 7, 164, 456
BlnI CCTAGG 1 cut(s) 194
BlsI GCNGC 3 cut(s) 8, 165, 457
BmcAI AGTACT 1 cut(s) 206
Bme1390I CCNGG 3 cut(s) 172, 261, 1347
Bme18I GGWCC 1 cut(s) 198
BmeT110I CYCGRG 2 cut(s) 623, 1111
BmgT120I GGNCC 2 cut(s) 198, 829
BmiI GGNNCC 4 cut(s) 254, 283, 340, 354
BmrFI CCNGG 3 cut(s) 172, 261, 1347
BmsI GCATC 1 cut(s) 856
BpiI GAAGAC 1 cut(s) 1300
BplI GAGNNNNNCTC 2 cut(s) 241, 273
BpmI CTGGAG 2 cut(s) 243, 357
Bpu14I TTCGAA 1 cut(s) 1206
BsaBI GATNNNNATC 1 cut(s) 1044
BsaJI CCNNGG 5 cut(s) 151, 170, 194, 520, 1171
BsaWI WCCGGW 1 cut(s) 24
Bsc4I CCNNNNNNNGG 3 cut(s) 263, 335, 349
Bse1I ACTGG 1 cut(s) 953
Bse8I GATNNNNATC 1 cut(s) 1044
BseAI TCCGGA 1 cut(s) 24
BseBI CCWGG 3 cut(s) 172, 261, 1347
BseDI CCNNGG 5 cut(s) 151, 170, 194, 520, 1171
BseGI GGATG 5 cut(s) 147, 795, 949, 982, 1261
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 3 cut(s) 263, 335, 349
BseMII CTCAG 2 cut(s) 300, 1206
BseNI ACTGG 1 cut(s) 953
BseSI GKGCMC 1 cut(s) 952
BseXI GCAGC 3 cut(s) 18, 175, 442
BseYI CCCAGC 1 cut(s) 342
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 1 cut(s) 831
BsiEI CGRYCG 1 cut(s) 91
BsiHKAI GWGCWC 3 cut(s) 160, 519, 952
BsiHKCI CYCGRG 2 cut(s) 623, 1111
BsiSI CCGG 1 cut(s) 25
BslI CCNNNNNNNGG 3 cut(s) 263, 335, 349
BsmAI GTCTC 2 cut(s) 80, 138
BsmBI CGTCTC 1 cut(s) 80
BsmI GAATGC 2 cut(s) 810, 1254
BsnI GGCC 1 cut(s) 831
BsoBI CYCGRG 2 cut(s) 623, 1111
Bsp119I TTCGAA 1 cut(s) 1206
Bsp1286I GDGCHC 4 cut(s) 160, 343, 519, 952
Bsp13I TCCGGA 1 cut(s) 24
Bsp143I GATC 9 cut(s) 88, 385, 660, 723, 739, 772, 1045, 1147, 1297
Bsp19I CCATGG 1 cut(s) 520
BspACI CCGC 4 cut(s) 161, 667, 941, 1026
BspANI GGCC 1 cut(s) 831
BspCNI CTCAG 2 cut(s) 301, 1205
BspEI TCCGGA 1 cut(s) 24
BspHI TCATGA 1 cut(s) 388
BspLI GGNNCC 4 cut(s) 254, 283, 340, 354
BspMAI CTGCAG 1 cut(s) 460
BspPI GGATC 2 cut(s) 718, 1155
BspT104I TTCGAA 1 cut(s) 1206
BsrI ACTGG 1 cut(s) 953
BssECI CCNNGG 5 cut(s) 151, 170, 194, 520, 1171
BssMI GATC 9 cut(s) 88, 385, 660, 723, 739, 772, 1045, 1147, 1297
BssNAI GTATAC 1 cut(s) 1099
BssT1I CCWWGG 3 cut(s) 194, 520, 1171
Bst1107I GTATAC 1 cut(s) 1099
Bst2UI CCWGG 3 cut(s) 172, 261, 1347
Bst4CI ACNGT 4 cut(s) 489, 533, 599, 859
Bst6I CTCTTC 1 cut(s) 136
BstBI TTCGAA 1 cut(s) 1206
BstDEI CTNAG 5 cut(s) 309, 1192, 1213, 1301, 1315
BstDSI CCRYGG 2 cut(s) 151, 520
BstENI CCTNNNNNAGG 1 cut(s) 261
BstF5I GGATG 5 cut(s) 147, 795, 949, 982, 1261
BstHHI GCGC 1 cut(s) 431
BstKTI GATC 9 cut(s) 91, 388, 663, 726, 742, 775, 1048, 1150, 1300
BstMAI GTCTC 2 cut(s) 80, 138
BstMBI GATC 9 cut(s) 88, 385, 660, 723, 739, 772, 1045, 1147, 1297
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 1 cut(s) 947
BstNI CCWGG 3 cut(s) 172, 261, 1347
BstNSI RCATGY 1 cut(s) 1360
BstSCI CCNGG 3 cut(s) 170, 259, 1345
BstSFI CTRYAG 2 cut(s) 375, 456
BstSLI GKGCMC 1 cut(s) 952
BstV1I GCAGC 3 cut(s) 18, 175, 442
BstV2I GAAGAC 1 cut(s) 1300
BstX2I RGATCY 1 cut(s) 1045
BstXI CCANNNNNNTGG 1 cut(s) 267
BstYI RGATCY 1 cut(s) 1045
BstZ17I GTATAC 1 cut(s) 1099
BsuRI GGCC 1 cut(s) 831
BtgI CCRYGG 2 cut(s) 151, 520
BtsCI GGATG 5 cut(s) 147, 795, 949, 982, 1261
CciI TCATGA 1 cut(s) 388
CfoI GCGC 1 cut(s) 431
Cfr13I GGNCC 2 cut(s) 198, 829
CseI GACGC 2 cut(s) 62, 1227
Csp6I GTAC 6 cut(s) 179, 205, 320, 635, 1072, 1133
CspCI CAANNNNNGTGG 2 cut(s) 738, 773
CviAII CATG 7 cut(s) 365, 389, 495, 521, 538, 1357, 1380
CviQI GTAC 6 cut(s) 179, 205, 320, 635, 1072, 1133
DdeI CTNAG 5 cut(s) 309, 1192, 1213, 1301, 1315
DpnI GATC 9 cut(s) 90, 387, 662, 725, 741, 774, 1047, 1149, 1299
DpnII GATC 9 cut(s) 88, 385, 660, 723, 739, 772, 1045, 1147, 1297
Eam1104I CTCTTC 1 cut(s) 136
EarI CTCTTC 1 cut(s) 136
Eco130I CCWWGG 3 cut(s) 194, 520, 1171
Eco24I GRGCYC 1 cut(s) 343
Eco47I GGWCC 1 cut(s) 198
Eco88I CYCGRG 2 cut(s) 623, 1111
EcoNI CCTNNNNNAGG 1 cut(s) 261
EcoRII CCWGG 3 cut(s) 170, 259, 1345
EcoT14I CCWWGG 3 cut(s) 194, 520, 1171
EcoT38I GRGCYC 1 cut(s) 343
ErhI CCWWGG 3 cut(s) 194, 520, 1171
Esp3I CGTCTC 1 cut(s) 80
FaeI CATG 7 cut(s) 368, 392, 498, 524, 541, 1360, 1383
FalI AAGNNNNNCTT 2 cut(s) 575, 607
FatI CATG 7 cut(s) 364, 388, 494, 520, 537, 1356, 1379
FbaI TGATCA 1 cut(s) 385
FblI GTMKAC 1 cut(s) 1098
Fnu4HI GCNGC 3 cut(s) 7, 164, 456
FokI GGATG 5 cut(s) 134, 782, 956, 989, 1248
FriOI GRGCYC 1 cut(s) 343
Fsp4HI GCNGC 3 cut(s) 7, 164, 456
FspBI CTAG 5 cut(s) 135, 195, 219, 426, 1049
GlaI GCGC 1 cut(s) 430
GluI GCNGC 3 cut(s) 7, 164, 456
GsaI CCCAGC 1 cut(s) 346
GsuI CTGGAG 2 cut(s) 243, 357
HaeIII GGCC 1 cut(s) 831
HapII CCGG 1 cut(s) 25
HgaI GACGC 2 cut(s) 62, 1227
HhaI GCGC 1 cut(s) 431
Hin1II CATG 7 cut(s) 368, 392, 498, 524, 541, 1360, 1383
Hin6I GCGC 1 cut(s) 429
HinP1I GCGC 1 cut(s) 429
HincII GTYRAC 1 cut(s) 1000
HindII GTYRAC 1 cut(s) 1000
HinfI GANTC 6 cut(s) 116, 371, 398, 437, 653, 698
HpaII CCGG 1 cut(s) 25
HphI GGTGA 6 cut(s) 536, 773, 899, 971, 992, 1049
Hpy166II GTNNAC 7 cut(s) 181, 241, 682, 950, 1000, 1072, 1099
Hpy188I TCNGA 1 cut(s) 442
Hpy188III TCNNGA 5 cut(s) 25, 77, 336, 389, 650
Hpy8I GTNNAC 7 cut(s) 181, 241, 682, 950, 1000, 1072, 1099
Hpy99I CGWCG 3 cut(s) 935, 968, 1013
HpyAV CCTTC 3 cut(s) 1028, 1052, 1202
HpyCH4III ACNGT 4 cut(s) 489, 533, 599, 859
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 5 cut(s) 458, 789, 950, 1227, 1360
HpyF10VI GCNNNNNNNGC 1 cut(s) 947
HpyF3I CTNAG 5 cut(s) 309, 1192, 1213, 1301, 1315
HpySE526I ACGT 1 cut(s) 97
Hsp92II CATG 7 cut(s) 368, 392, 498, 524, 541, 1360, 1383
HspAI GCGC 1 cut(s) 429
Kpn2I TCCGGA 1 cut(s) 24
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 9 cut(s) 88, 385, 660, 723, 739, 772, 1045, 1147, 1297
LmnI GCTCC 5 cut(s) 163, 171, 258, 338, 522
Lsp1109I GCAGC 3 cut(s) 18, 175, 442
LweI GCATC 1 cut(s) 856
MaeI CTAG 5 cut(s) 135, 195, 219, 426, 1049
MaeII ACGT 1 cut(s) 97
MaeIII GTNAC 3 cut(s) 533, 959, 1052
MalI GATC 9 cut(s) 90, 387, 662, 725, 741, 774, 1047, 1149, 1299
MboI GATC 9 cut(s) 88, 385, 660, 723, 739, 772, 1045, 1147, 1297
MboII GAAGA 9 cut(s) 73, 153, 554, 779, 1025, 1028, 1170, 1300, 1363
MflI RGATCY 1 cut(s) 1045
MhlI GDGCHC 4 cut(s) 160, 343, 519, 952
MlyI GAGTC 4 cut(s) 125, 380, 446, 647
MroI TCCGGA 1 cut(s) 24
MseI TTAA 3 cut(s) 101, 465, 917
MslI CAYNNNNRTG 2 cut(s) 525, 1361
MspI CCGG 1 cut(s) 25
MspR9I CCNGG 3 cut(s) 172, 261, 1347
Mva1269I GAATGC 2 cut(s) 810, 1254
MvaI CCWGG 3 cut(s) 172, 261, 1347
MwoI GCNNNNNNNGC 1 cut(s) 947
NcoI CCATGG 1 cut(s) 520
NdeII GATC 9 cut(s) 88, 385, 660, 723, 739, 772, 1045, 1147, 1297
NlaIII CATG 7 cut(s) 368, 392, 498, 524, 541, 1360, 1383
NlaIV GGNNCC 4 cut(s) 254, 283, 340, 354
NmuCI GTSAC 1 cut(s) 959
NspI RCATGY 1 cut(s) 1360
NspV TTCGAA 1 cut(s) 1206
PagI TCATGA 1 cut(s) 388
PcsI WCGNNNNNNNCGW 2 cut(s) 84, 1008
PctI GAATGC 2 cut(s) 810, 1254
PfeI GAWTC 2 cut(s) 398, 698
PfoI TCCNGGA 1 cut(s) 259
PkrI GCNGC 3 cut(s) 8, 165, 457
Ple19I CGATCG 1 cut(s) 91
PleI GAGTC 4 cut(s) 124, 379, 445, 647
PpsI GAGTC 4 cut(s) 124, 379, 445, 647
PsiI TTATAA 2 cut(s) 479, 1387
Psp6I CCWGG 3 cut(s) 170, 259, 1345
PspFI CCCAGC 1 cut(s) 342
PspGI CCWGG 3 cut(s) 170, 259, 1345
PspN4I GGNNCC 4 cut(s) 254, 283, 340, 354
PspPI GGNCC 2 cut(s) 198, 829
PstI CTGCAG 1 cut(s) 460
PsuI RGATCY 1 cut(s) 1045
PvuI CGATCG 1 cut(s) 91
RsaI GTAC 6 cut(s) 180, 206, 321, 636, 1073, 1134
RsaNI GTAC 6 cut(s) 179, 205, 320, 635, 1072, 1133
RseI CAYNNNNRTG 2 cut(s) 525, 1361
SaqAI TTAA 3 cut(s) 101, 465, 917
SatI GCNGC 3 cut(s) 7, 164, 456
Sau3AI GATC 9 cut(s) 88, 385, 660, 723, 739, 772, 1045, 1147, 1297
Sau96I GGNCC 2 cut(s) 198, 829
ScaI AGTACT 1 cut(s) 206
SchI GAGTC 4 cut(s) 125, 380, 446, 647
ScrFI CCNGG 3 cut(s) 172, 261, 1347
SduI GDGCHC 4 cut(s) 160, 343, 519, 952
SfaNI GCATC 1 cut(s) 856
SfcI CTRYAG 2 cut(s) 375, 456
SfuI TTCGAA 1 cut(s) 1206
SinI GGWCC 1 cut(s) 198
SmiMI CAYNNNNRTG 2 cut(s) 525, 1361
SsiI CCGC 4 cut(s) 161, 667, 941, 1026
SspI AATATT 2 cut(s) 415, 1155
SspMI CTAG 5 cut(s) 135, 195, 219, 426, 1049
StyD4I CCNGG 3 cut(s) 170, 259, 1345
StyI CCWWGG 3 cut(s) 194, 520, 1171
TaaI ACNGT 4 cut(s) 489, 533, 599, 859
TaiI ACGT 1 cut(s) 100
TaqI TCGA 4 cut(s) 78, 91, 742, 1206
TatI WGTACW 4 cut(s) 178, 204, 319, 1071
TfiI GAWTC 2 cut(s) 398, 698
Tru1I TTAA 3 cut(s) 101, 465, 917
Tru9I TTAA 3 cut(s) 101, 465, 917
TseFI GTSAC 1 cut(s) 959
TseI GCWGC 3 cut(s) 6, 163, 455
Tsp45I GTSAC 1 cut(s) 959
TspDTI ATGAA 8 cut(s) 405, 483, 726, 924, 951, 1304, 1338, 1363
TspGWI ACGGA 2 cut(s) 140, 1260
VneI GTGCAC 1 cut(s) 948
VpaK11BI GGWCC 1 cut(s) 198
XagI CCTNNNNNAGG 1 cut(s) 261
XapI RAATTY 3 cut(s) 556, 607, 732
XceI RCATGY 1 cut(s) 1360
XcmI CCANNNNNNNNNTGG 1 cut(s) 267
XmaJI CCTAGG 1 cut(s) 194
XmiI GTMKAC 1 cut(s) 1098
XspI CTAG 5 cut(s) 135, 195, 219, 426, 1049
ZrmI AGTACT 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.