Prupe.8G151600_v2.0.a1

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000144
Physical Location & Seq
Forward (+)
16495344 .. 16498199
2856 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G151600.1

Sequence Viewer

Length: 1503 bp
ATGAGTGAGACTCTATTTTTGGCCTACCAAAATCTGGGTGACTACCTCTCTTTAAGCAGCTGGTTCCCTTGCTTCACGCTCAAGAAACTATTACTTCAACTCAGAGGAAATTCAGATAAGAAGAGAAAGCAATACGAAAACCAAACCAGTAGTTCTTTTGAGTACAGCAGCAGCAGCGGGTGGCAGAGAGTACACGAAGATATCATGGAGATGATTGTACAGCGCCTGAGTTTAAGGGATCGAATTCGCACAGGTCTTGCCTGCAAGTCTTGGAATTCAGTTTGTATGCGAGGACACATCCGCGGTGCTCAAGAAGCGCCCTGGTTAGTTCTTCCTCAGGATCCAAATTGCAAGTGCTTGTCCGTTACCAACCTTGCCTACGGCAAAGTTCACAAGTTGAGGCTGCCTAAGCCAATTCGTGGAAGTCGGTTTTATGGCTCTTCAAGAGGTTGGTTAATTATGATTCAAGAAAAAATACTGAATTCTAAAATGTTTCTGTTCAACCCGGTTTCAGGAGCCTTTTGCCAACTTCCACCATTGGCGACAATTCCATCTTTCAAAGAGTACGTAGAAACAGAATGGGATTTGTGTGGTACCAGCTTTTTCTTTCATGACATTGTGCTATCCACCTCAGATATTAATAATTCAGAATGTATGGTGGCAGCAATATTTGATAATTTAAAGGTGTTGGTTCTGTGTAGACCTGGAGACAAAACATGGAGTGGCTTCCAGGTATTAGATGAAAATGAACTTCATTGCCAATTATTGTTTTCTAGTACTGGTAAGTTATATTCCTTGTTTCTTAGTTATATTAAGAGTGAGCTCATCCAACCTTGCACCATAAAATTTGGAGATGCAGAAGTGGAATTTATCTTAGTCTGTGATAACGAGGAGCAGATTGGAATTGACGTTGAGTATCATAATGACTACAAAATCAGTTTAAATGGGGAATACAACTCATTCTTGTTTGAATCAACCAACAATGAAGTCTTGGTTATCCATCAAATACTAGATGTTTTTAAAATTCGCAGAAGCGTGGATGATGAGGATGATCAAGAACTGGAACTGGAACTCGAAGGAGGAAATCATCATCAAGGTGATGATGAAGAAGAAGAACACAACATGCAAGAAGAAAATGATGACGAGCTCGAGGAGGGCAACACTGACGATGATCATGAATATTTCAGGACATCTGGTTTTAAAGTTTACAAGATTGATCCTGAGACTGGTGACTTTCTTCAGGAACAAAGTTTGGGGGATCAAACCTTATTTTTGAGCTTGCATGGTTCCTTCTCTCTTCGGGCGAGCAATTTCATAGAGTTAGACAGAAACAACATTTACTTTGCAACAATTGGATTGGACCGCTTTAATGTTCGCAAATCATTTACAACTCGTGAGATCGGCATCTTCTGCCTCGATAATGAAAGAGTTGAGAGATCCTTTCCAAGCGTCCAAGAGTCAATGGGGTCTCGAATGAGTTGGTTTACTCCAAGTTTGGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

501

Amino Acids

57.64

Weight (kDa)

4.83

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 593
AccB1I GGYRCC 1 cut(s) 593
AccB7I CCANNNNNTGG 2 cut(s) 34, 419
AccI GTMKAC 1 cut(s) 700
AccII CGCG 1 cut(s) 303
AciI CCGC 4 cut(s) 177, 301, 303, 1363
AclWI GGATC 6 cut(s) 246, 335, 348, 1211, 1266, 1431
AcsI RAATTY 7 cut(s) 109, 243, 274, 481, 845, 866, 1023
AcuI CTGAAG 1 cut(s) 1223
AfaI GTAC 6 cut(s) 164, 192, 219, 566, 595, 778
AfiI CCNNNNNNNGG 5 cut(s) 34, 419, 512, 1226, 1496
AgsI TTSAA 6 cut(s) 98, 444, 467, 502, 559, 971
AjnI CCWGG 3 cut(s) 320, 703, 729
AluBI AGCT 5 cut(s) 60, 600, 823, 1147, 1278
AluI AGCT 5 cut(s) 60, 600, 823, 1147, 1278
Alw21I GWGCWC 3 cut(s) 310, 825, 1149
Alw26I GTCTC 4 cut(s) 2, 702, 1217, 1473
AlwI GGATC 6 cut(s) 246, 335, 348, 1211, 1266, 1431
AlwNI CAGNNNCTG 1 cut(s) 226
Ama87I CYCGRG 1 cut(s) 1148
AoxI GGCC 1 cut(s) 21
ApeKI GCWGC 6 cut(s) 57, 168, 171, 174, 403, 662
ApoI RAATTY 7 cut(s) 109, 243, 274, 481, 845, 866, 1023
ArsI GACNNNNNNTTYG 1 cut(s) 33
AseI ATTAAT 1 cut(s) 639
Asp718I GGTACC 1 cut(s) 593
AspLEI GCGC 2 cut(s) 225, 319
AspS9I GGNCC 1 cut(s) 1360
AsuC2I CCSGG 1 cut(s) 506
AsuHPI GGTGA 3 cut(s) 50, 1109, 1241
AvaI CYCGRG 1 cut(s) 1148
AvaII GGWCC 1 cut(s) 1360
AxyI CCTNAGG 1 cut(s) 336
BamHI GGATCC 1 cut(s) 340
BanI GGYRCC 1 cut(s) 593
BanII GRGCYC 2 cut(s) 825, 1149
BauI CACGAG 1 cut(s) 1392
Bbv12I GWGCWC 3 cut(s) 310, 825, 1149
BbvI GCAGC 6 cut(s) 69, 180, 183, 186, 390, 674
BccI CCATC 2 cut(s) 559, 1008
BceAI ACGGC 1 cut(s) 397
BciT130I CCWGG 3 cut(s) 322, 705, 731
BclI TGATCA 2 cut(s) 1051, 1171
BcnI CCSGG 1 cut(s) 506
BcoDI GTCTC 4 cut(s) 2, 702, 1217, 1473
BfaI CTAG 2 cut(s) 774, 1010
BfoI RGCGCY 2 cut(s) 226, 320
BisI GCNGC 6 cut(s) 58, 169, 172, 175, 404, 663
BlsI GCNGC 6 cut(s) 59, 170, 173, 176, 405, 664
BmcAI AGTACT 1 cut(s) 778
Bme1390I CCNGG 4 cut(s) 322, 506, 705, 731
Bme18I GGWCC 1 cut(s) 1360
BmeT110I CYCGRG 1 cut(s) 1148
BmgT120I GGNCC 1 cut(s) 1360
BmiI GGNNCC 5 cut(s) 65, 342, 517, 595, 1288
BmrFI CCNGG 4 cut(s) 322, 506, 705, 731
BmsI GCATC 2 cut(s) 844, 1413
BplI GAGNNNNNCTC 1 cut(s) 27
BpmI CTGGAG 1 cut(s) 726
Bpu10I CCTNAGC 1 cut(s) 408
BpuEI CTTGAG 2 cut(s) 65, 294
BpuMI CCSGG 1 cut(s) 506
BsaAI YACGTR 1 cut(s) 568
BsaBI GATNNNNATC 1 cut(s) 1403
BsaI GGTCTC 1 cut(s) 1473
BsaJI CCNNGG 2 cut(s) 301, 320
Bsc4I CCNNNNNNNGG 5 cut(s) 34, 419, 512, 1226, 1496
Bse1I ACTGG 5 cut(s) 147, 784, 1065, 1071, 1231
Bse21I CCTNAGG 1 cut(s) 336
Bse3DI GCAATG 1 cut(s) 754
Bse8I GATNNNNATC 1 cut(s) 1403
BseBI CCWGG 3 cut(s) 322, 705, 731
BseDI CCNNGG 2 cut(s) 301, 320
BseGI GGATG 4 cut(s) 297, 825, 1045, 1054
BseJI GATNNNNATC 1 cut(s) 1403
BseLI CCNNNNNNNGG 5 cut(s) 34, 419, 512, 1226, 1496
BseMI GCAATG 1 cut(s) 754
BseMII CTCAG 5 cut(s) 115, 218, 350, 645, 1212
BseNI ACTGG 5 cut(s) 147, 784, 1065, 1071, 1231
BseRI GAGGAG 2 cut(s) 905, 1166
BseXI GCAGC 6 cut(s) 69, 180, 183, 186, 390, 674
Bsh1236I CGCG 1 cut(s) 303
BshFI GGCC 1 cut(s) 23
BshNI GGYRCC 1 cut(s) 593
BsiHKAI GWGCWC 3 cut(s) 310, 825, 1149
BsiHKCI CYCGRG 1 cut(s) 1148
BsiSI CCGG 1 cut(s) 506
BslI CCNNNNNNNGG 5 cut(s) 34, 419, 512, 1226, 1496
BsmAI GTCTC 4 cut(s) 2, 702, 1217, 1473
BsnI GGCC 1 cut(s) 23
Bso31I GGTCTC 1 cut(s) 1473
BsoBI CYCGRG 1 cut(s) 1148
Bsp1286I GDGCHC 3 cut(s) 310, 825, 1149
Bsp1407I TGTACA 1 cut(s) 217
Bsp143I GATC 8 cut(s) 238, 340, 1051, 1171, 1216, 1258, 1398, 1436
BspACI CCGC 4 cut(s) 177, 301, 303, 1363
BspANI GGCC 1 cut(s) 23
BspCNI CTCAG 5 cut(s) 114, 219, 349, 644, 1213
BspFNI CGCG 1 cut(s) 303
BspHI TCATGA 2 cut(s) 610, 1174
BspLI GGNNCC 5 cut(s) 65, 342, 517, 595, 1288
BspPI GGATC 6 cut(s) 246, 335, 348, 1211, 1266, 1431
BspQI GCTCTTC 1 cut(s) 445
BspT107I GGYRCC 1 cut(s) 593
BspTNI GGTCTC 1 cut(s) 1473
BsrDI GCAATG 1 cut(s) 754
BsrGI TGTACA 1 cut(s) 217
BsrI ACTGG 5 cut(s) 147, 784, 1065, 1071, 1231
BssECI CCNNGG 2 cut(s) 301, 320
BssMI GATC 8 cut(s) 238, 340, 1051, 1171, 1216, 1258, 1398, 1436
BssSI CACGAG 1 cut(s) 1392
Bst2BI CACGAG 1 cut(s) 1392
Bst2UI CCWGG 3 cut(s) 322, 705, 731
Bst6I CTCTTC 3 cut(s) 116, 445, 1302
BstAPI GCANNNNNTGC 1 cut(s) 1410
BstAUI TGTACA 1 cut(s) 217
BstBAI YACGTR 1 cut(s) 568
BstC8I GCNNGC 3 cut(s) 262, 1280, 1306
BstDEI CTNAG 8 cut(s) 101, 227, 336, 408, 631, 803, 874, 1221
BstDSI CCRYGG 1 cut(s) 301
BstF5I GGATG 4 cut(s) 297, 825, 1045, 1054
BstFNI CGCG 1 cut(s) 303
BstH2I RGCGCY 2 cut(s) 226, 320
BstHHI GCGC 2 cut(s) 225, 319
BstKTI GATC 8 cut(s) 241, 343, 1054, 1174, 1219, 1261, 1401, 1439
BstMAI GTCTC 4 cut(s) 2, 702, 1217, 1473
BstMBI GATC 8 cut(s) 238, 340, 1051, 1171, 1216, 1258, 1398, 1436
BstMWI GCNNNNNNNGC 4 cut(s) 174, 314, 409, 1410
BstNI CCWGG 3 cut(s) 322, 705, 731
BstNSI RCATGY 1 cut(s) 1126
BstSCI CCNGG 4 cut(s) 320, 504, 703, 729
BstSNI TACGTA 1 cut(s) 568
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 6 cut(s) 69, 180, 183, 186, 390, 674
BstX2I RGATCY 2 cut(s) 340, 1436
BstYI RGATCY 2 cut(s) 340, 1436
Bsu36I CCTNAGG 1 cut(s) 336
BsuRI GGCC 1 cut(s) 23
BtgI CCRYGG 1 cut(s) 301
BtsCI GGATG 4 cut(s) 297, 825, 1045, 1054
BtsIMutI CAGTG 1 cut(s) 1161
Cac8I GCNNGC 3 cut(s) 262, 1280, 1306
CaiI CAGNNNCTG 1 cut(s) 226
CciI TCATGA 2 cut(s) 610, 1174
CfoI GCGC 2 cut(s) 225, 319
Cfr13I GGNCC 1 cut(s) 1360
Cfr42I CCGCGG 1 cut(s) 304
CseI GACGC 1 cut(s) 1438
Csp6I GTAC 6 cut(s) 163, 191, 218, 565, 594, 777
CviAII CATG 6 cut(s) 205, 611, 717, 1123, 1175, 1283
CviQI GTAC 6 cut(s) 163, 191, 218, 565, 594, 777
DdeI CTNAG 8 cut(s) 101, 227, 336, 408, 631, 803, 874, 1221
DpnI GATC 8 cut(s) 240, 342, 1053, 1173, 1218, 1260, 1400, 1438
DpnII GATC 8 cut(s) 238, 340, 1051, 1171, 1216, 1258, 1398, 1436
DraI TTTAAA 4 cut(s) 681, 942, 1021, 1201
Eam1104I CTCTTC 3 cut(s) 116, 445, 1302
EarI CTCTTC 3 cut(s) 116, 445, 1302
Ecl136II GAGCTC 2 cut(s) 823, 1147
Eco105I TACGTA 1 cut(s) 568
Eco24I GRGCYC 2 cut(s) 825, 1149
Eco31I GGTCTC 1 cut(s) 1473
Eco32I GATATC 1 cut(s) 202
Eco47I GGWCC 1 cut(s) 1360
Eco53kI GAGCTC 2 cut(s) 823, 1147
Eco57I CTGAAG 1 cut(s) 1223
Eco81I CCTNAGG 1 cut(s) 336
Eco88I CYCGRG 1 cut(s) 1148
EcoICRI GAGCTC 2 cut(s) 823, 1147
EcoRI GAATTC 3 cut(s) 243, 274, 481
EcoRII CCWGG 3 cut(s) 320, 703, 729
EcoRV GATATC 1 cut(s) 202
EcoT38I GRGCYC 2 cut(s) 825, 1149
FaeI CATG 6 cut(s) 208, 614, 720, 1126, 1178, 1286
FatI CATG 6 cut(s) 204, 610, 716, 1122, 1174, 1282
FauI CCCGC 1 cut(s) 170
FbaI TGATCA 2 cut(s) 1051, 1171
FblI GTMKAC 1 cut(s) 700
Fnu4HI GCNGC 6 cut(s) 58, 169, 172, 175, 404, 663
FokI GGATG 4 cut(s) 284, 812, 1052, 1061
FriOI GRGCYC 2 cut(s) 825, 1149
Fsp4HI GCNGC 6 cut(s) 58, 169, 172, 175, 404, 663
FspBI CTAG 2 cut(s) 774, 1010
GlaI GCGC 2 cut(s) 224, 318
GluI GCNGC 6 cut(s) 58, 169, 172, 175, 404, 663
GsuI CTGGAG 1 cut(s) 726
HaeII RGCGCY 2 cut(s) 226, 320
HaeIII GGCC 1 cut(s) 23
HapII CCGG 1 cut(s) 506
HgaI GACGC 1 cut(s) 1438
HhaI GCGC 2 cut(s) 225, 319
Hin1II CATG 6 cut(s) 208, 614, 720, 1126, 1178, 1286
Hin6I GCGC 2 cut(s) 223, 317
HinP1I GCGC 2 cut(s) 223, 317
HinfI GANTC 4 cut(s) 10, 463, 971, 1457
HpaII CCGG 1 cut(s) 506
HphI GGTGA 3 cut(s) 50, 1109, 1241
Hpy166II GTNNAC 5 cut(s) 193, 391, 701, 1207, 1485
Hpy188I TCNGA 4 cut(s) 104, 115, 634, 649
Hpy8I GTNNAC 5 cut(s) 193, 391, 701, 1207, 1485
HpyAV CCTTC 2 cut(s) 1070, 1300
HpyCH4IV ACGT 2 cut(s) 567, 909
HpyCH4V TGCA 7 cut(s) 264, 351, 837, 857, 1126, 1282, 1346
HpyF10VI GCNNNNNNNGC 4 cut(s) 174, 314, 409, 1410
HpyF3I CTNAG 8 cut(s) 101, 227, 336, 408, 631, 803, 874, 1221
HpySE526I ACGT 2 cut(s) 567, 909
Hsp92II CATG 6 cut(s) 208, 614, 720, 1126, 1178, 1286
HspAI GCGC 2 cut(s) 223, 317
KpnI GGTACC 1 cut(s) 597
Ksp22I TGATCA 2 cut(s) 1051, 1171
KspI CCGCGG 1 cut(s) 304
Kzo9I GATC 8 cut(s) 238, 340, 1051, 1171, 1216, 1258, 1398, 1436
LguI GCTCTTC 1 cut(s) 445
LmnI GCTCC 2 cut(s) 515, 892
Lsp1109I GCAGC 6 cut(s) 69, 180, 183, 186, 390, 674
LweI GCATC 2 cut(s) 844, 1413
MaeI CTAG 2 cut(s) 774, 1010
MaeII ACGT 2 cut(s) 567, 909
MaeIII GTNAC 3 cut(s) 38, 364, 1229
MalI GATC 8 cut(s) 240, 342, 1053, 1173, 1218, 1260, 1400, 1438
MboI GATC 8 cut(s) 238, 340, 1051, 1171, 1216, 1258, 1398, 1436
MfeI CAATTG 1 cut(s) 1350
MflI RGATCY 2 cut(s) 340, 1436
MhlI GDGCHC 3 cut(s) 310, 825, 1149
MlyI GAGTC 2 cut(s) 4, 1466
MmeI TCCRAC 1 cut(s) 853
MslI CAYNNNNRTG 2 cut(s) 209, 1095
MspA1I CMGCKG 3 cut(s) 60, 177, 303
MspI CCGG 1 cut(s) 506
MspR9I CCNGG 4 cut(s) 322, 506, 705, 731
MunI CAATTG 1 cut(s) 1350
MvaI CCWGG 3 cut(s) 322, 705, 731
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 4 cut(s) 174, 314, 409, 1410
NciI CCSGG 1 cut(s) 506
NdeII GATC 8 cut(s) 238, 340, 1051, 1171, 1216, 1258, 1398, 1436
NlaIII CATG 6 cut(s) 208, 614, 720, 1126, 1178, 1286
NlaIV GGNNCC 5 cut(s) 65, 342, 517, 595, 1288
NmuCI GTSAC 2 cut(s) 38, 1229
NspI RCATGY 1 cut(s) 1126
PaeR7I CTCGAG 1 cut(s) 1148
PagI TCATGA 2 cut(s) 610, 1174
PciSI GCTCTTC 1 cut(s) 445
PfeI GAWTC 2 cut(s) 463, 971
PflMI CCANNNNNTGG 2 cut(s) 34, 419
PkrI GCNGC 6 cut(s) 59, 170, 173, 176, 405, 664
PleI GAGTC 2 cut(s) 4, 1465
PpsI GAGTC 2 cut(s) 4, 1465
Ppu21I YACGTR 1 cut(s) 568
PshBI ATTAAT 1 cut(s) 639
Psp124BI GAGCTC 2 cut(s) 825, 1149
Psp6I CCWGG 3 cut(s) 320, 703, 729
PspGI CCWGG 3 cut(s) 320, 703, 729
PspN4I GGNNCC 5 cut(s) 65, 342, 517, 595, 1288
PspPI GGNCC 1 cut(s) 1360
PspXI VCTCGAGB 1 cut(s) 1148
PstNI CAGNNNCTG 1 cut(s) 226
PsuI RGATCY 2 cut(s) 340, 1436
PvuII CAGCTG 1 cut(s) 60
RsaI GTAC 6 cut(s) 164, 192, 219, 566, 595, 778
RsaNI GTAC 6 cut(s) 163, 191, 218, 565, 594, 777
RseI CAYNNNNRTG 2 cut(s) 209, 1095
SacI GAGCTC 2 cut(s) 825, 1149
SacII CCGCGG 1 cut(s) 304
SapI GCTCTTC 1 cut(s) 445
SatI GCNGC 6 cut(s) 58, 169, 172, 175, 404, 663
Sau3AI GATC 8 cut(s) 238, 340, 1051, 1171, 1216, 1258, 1398, 1436
Sau96I GGNCC 1 cut(s) 1360
ScaI AGTACT 1 cut(s) 778
SchI GAGTC 2 cut(s) 4, 1466
ScrFI CCNGG 4 cut(s) 322, 506, 705, 731
SduI GDGCHC 3 cut(s) 310, 825, 1149
SfaNI GCATC 2 cut(s) 844, 1413
Sfr274I CTCGAG 1 cut(s) 1148
Sfr303I CCGCGG 1 cut(s) 304
SgrBI CCGCGG 1 cut(s) 304
SinI GGWCC 1 cut(s) 1360
SlaI CTCGAG 1 cut(s) 1148
SmiMI CAYNNNNRTG 2 cut(s) 209, 1095
SmlI CTYRAG 3 cut(s) 80, 309, 1148
SmoI CTYRAG 3 cut(s) 80, 309, 1148
SnaBI TACGTA 1 cut(s) 568
SsiI CCGC 4 cut(s) 177, 301, 303, 1363
SspI AATATT 2 cut(s) 669, 1181
SspMI CTAG 2 cut(s) 774, 1010
SstI GAGCTC 2 cut(s) 825, 1149
StyD4I CCNGG 4 cut(s) 320, 504, 703, 729
TaiI ACGT 2 cut(s) 570, 912
TaqI TCGA 5 cut(s) 241, 1074, 1149, 1416, 1471
TatI WGTACW 4 cut(s) 162, 190, 217, 776
TfiI GAWTC 2 cut(s) 463, 971
TscAI CASTG 1 cut(s) 1168
TseFI GTSAC 2 cut(s) 38, 1229
TseI GCWGC 6 cut(s) 57, 168, 171, 174, 403, 662
Tsp45I GTSAC 2 cut(s) 38, 1229
TspDTI ATGAA 9 cut(s) 599, 743, 756, 762, 999, 1119, 1191, 1303, 1437
TspGWI ACGGA 1 cut(s) 352
TspRI CASTG 1 cut(s) 1168
Van91I CCANNNNNTGG 2 cut(s) 34, 419
VpaK11BI GGWCC 1 cut(s) 1360
VspI ATTAAT 1 cut(s) 639
XapI RAATTY 7 cut(s) 109, 243, 274, 481, 845, 866, 1023
XceI RCATGY 1 cut(s) 1126
XhoI CTCGAG 1 cut(s) 1148
XmiI GTMKAC 1 cut(s) 700
XspI CTAG 2 cut(s) 774, 1010
ZrmI AGTACT 1 cut(s) 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.