RLG00000009755

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000144
Physical Location & Seq
Forward (+)
57377643 .. 57379178
1536 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009755

Sequence Viewer

Length: 1536 bp
ATGGAGGTGATTATTGATACTCTGGTCATTTGCGGTTGCTTAGTGTTTGGTGGTAGTGTGATCAAAAGACTGCTCTGTAGCAGACCCTGGGAGACATTACCTGATGATGTCATGGAGATGGTTGTGTCGCACCTGAGTGTACGTGATCGTATACGATTAAGCAGTGTTTGCAAGTCTTGGAACACCGTTCCTATGCGCAGAGATATCCCTAGTGCTCCACATCAACTCCCCTGGTTAATACTTCCTCAATGTTGCCATAAGAGCTTGAGCTTTTACGACCTCTATGACGGCAAAGTTGGCAAGTTGGACCTGCCTGAACCAGTTCAAGGAGGGTGGTTTGAAGGATCTTCTAAAGGTTGGATGATCATGGTCATGGAAAAAGATCTAGATTCTATAATGTTTCTAGTAAATCCCATTTCAGGAGCCCTACACCAACTTCCATCTTTGAGCACGGTTCCATCTTTCCAAAATTTTGTAGAAACGACCAGATGGAAACGTTATGGTGCCTCCCGTTTCAGCTATTGGCTTGCGCTGTCCACCTCGGATATCACTTCAGAGCAATGTATGATAGCAGCTTTCTTTGGAGACGCTGAAACATTGTGTTTGTGCAGACCTGGAGACACAAGTTGGAGTATTTGCGAGGTACTAGATGCTAATGAGGTCATTATGGATTTATTGTTTTCTTCTGGCAAGCTATATGCCTTGGTTCTTAGTCATGATAAGGAAGGCTTTATGTCAGCTCCTCGTACTTTAAGTTGTGGAGGTCATGACGTGGAATTATATCTGGTCTATGATATAATGCCAAGATTCAGTGGCCAGAATGAAGTATATGGGGACTTTATAGTCCAAATAAAAGCGTCACTAGACTCACATTTGATAGAGTCAGCAACCAATGGTGAAATATATTTGATCCATCAAATGCAAGATAAATTTATGAAATTGTATGACGACGAGAACCCTGAGGATGGTGGCGGTGGAGGTCAAGGTGAAGGTGGAGGAAATGAGGAGGATGATTATGTTGAAGGCAGGGATGATGACAATGACTTTGACAATGAGGAACATGACAACCTGGAAGATAATGAGGATGGAGGAGATGATATCCATGACATGGATGATGACAATGACTCTGCCAATGAGGAACATGACAACTTGGAAGATAATGAGGATGGAGGAGATGGTATCACTAGAGTTGAGGAAGAAGATCGTGACCTTAATGTATATTTGAGGACAAGTGCTTTTTATGTTTACAAGCTTCACCCAAAGAAGAAGAAGATTGTTAGCGCACCGTGCCTGGAGGATCAACTATTGTTTTTGTCGGGCGCGGGTCATGTGTCCCTTCCTGCAAGAGAGATCAACAAGTTGGAAGGAAATTGTATTTATTTTGCAACAAATAATCACTCGACTTTACATCAGCGAGAATATATAAATCGAGAGCTTGGCATATTCAACTTGGATAATAGAAGAGTTAAGCGATCTTTCCCAAGCGTTAGGGTGTCGGTACGCACTCGACTTAGCTGGTTTAATCCGATTTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

512

Amino Acids

57.78

Weight (kDa)

4.6

Isoelectric Point (pI)

42.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 30 - 62 2.3e-09 F-box domain
F-box-like PF12937 30 - 62 4.8e-08 F-box-like
Beta-prop_KIB1-4 PF03478 91 - 483 3.5e-32 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000144)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03062 FvH4_2g03731 FvH4_2g04271 FvH4_2g04880 FvH4_2g04887 FvH4_2g06581 FvH4_2g16550 FvH4_2g16551 FvH4_2g16580 FvH4_4g01551 FvH4_4g01581 FvH4_4g01590 FvH4_4g01970 FvH4_4g02080 FvH4_4g02090 FvH4_4g02150 FvH4_5g18721 FvH4_5g33551 FvH4_5g33621 FvH4_7g08620
malus_domestica MD03G1012300.v1.1 MD05G1134000.v1.1 MD17G1018900.v1.1
prunus_persica Prupe.8G151600_v2.0.a1 Prupe.8G152400_v2.0.a1
pyrus_communis pycom03g01090 pycom17g01570
rosa_chinensis RchiOBHm_Chr4g0388141 RchiOBHm_Chr4g0388171 RchiOBHm_Chr4g0393001 RchiOBHm_Chr4g0393391 RchiOBHm_Chr4g0393471 RchiOBHm_Chr5g0063131 RchiOBHm_Chr6g0247891 RchiOBHm_Chr6g0254551 RchiOBHm_Chr6g0254611 RchiOBHm_Chr6g0254631 RchiOBHm_Chr6g0254681 RchiOBHm_Chr6g0280611
rosa_laevigata RLG00000001327 RLG00000001371 RLG00000003555 RLG00000003556 RLG00000009751 RLG00000009755 RLG00000010077 RLG00000012931 RLG00000013040 RLG00000013044 RLG00000013045 RLG00000014594 RLG00000014599 RLG00000014600 RLG00000014604 RLG00000014897 RLG00000014902 RLG00000014904 RLG00000014975 RLG00000014978 RLG00000014979 RLG00000015006 RLG00000023873 RLG00000035608
rosa_multiflora Rmu_co8471587.1_g000001 Rmu_sc0000976.1_g000004 Rmu_sc0001432.1_g000003 Rmu_sc0001432.1_g000004 Rmu_sc0001590.1_g000006 Rmu_sc0003093.1_g000008 Rmu_sc0005045.1_g000035 Rmu_sc0006323.1_g000014 Rmu_sc0007214.1_g000010 Rmu_sc0007839.1_g000011 Rmu_sc0008530.1_g000006 Rmu_sc0008789.1_g000010 Rmu_sc0009578.1_g000013 Rmu_sc0012965.1_g000003 Rmu_sc0036636.1_g000001
rosa_roxburghii Rroxscaffold_178G00437520 Rroxscaffold_178G00437560 Rroxscaffold_2G00106430 Rroxscaffold_5G00334690 Rroxscaffold_5G00338370 Rroxscaffold_5G00356450 Rroxscaffold_6G00388740 Rroxscaffold_6G00406660 Rroxscaffold_7G00187690 Rroxscaffold_7G00187810 Rroxscaffold_7G00187840 Rroxscaffold_7G00187880 Rroxscaffold_7G00205770 Rroxscaffold_7G00205790 Rroxscaffold_7G00205830 Rroxscaffold_7G00205840 Rroxscaffold_7G00205880 Rroxscaffold_7G00205920 Rroxscaffold_7G00205990 Rroxscaffold_7G00210640 Rroxscaffold_7G00210680 Rroxscaffold_7G00211580 Rroxscaffold_7G00211600
rosa_rugosa Rorug03G0315100 Rorug03G0315200 Rorug03G0315800 Rorug04G0001400 Rorug04G0001700 Rorug04G0003000 Rorug05G0354500 Rorug05G0546700 Rorug05G0546800 Rorug05G0546900 Rorug05G0553400 Rorug05G0553500 Rorug05G0553500 Rorug05G0553600 Rorug05G0553900 Rorug05G0554100 Rorug05G0554300 Rorug05G0582500 Rorug06G0132600 Rorug06G0132700 Rorug06G0132800 Rorug06G0133300 Rorug06G0133300 Rorug06G0185400 Rorug07G0074300 Rorug07G0074400 Rorug07G0275100
rosa_samantha Rh3AG195300 Rh3BG225400 Rh3BG225500 Rh3CG220300 Rh3DG220800 Rh3DG220900 Rh4AG020900 Rh4AG021400 Rh4AG047100 Rh4BG015300 Rh4BG041200 Rh4BG042800 Rh4BG043400 Rh4CG021500 Rh4CG021600 Rh4CG050100 Rh4CG050200 Rh5AG414800 Rh5CG453300 Rh6AG062600 Rh6AG070300 Rh6AG070500 Rh6AG070900 Rh6AG071200 Rh6AG099000 Rh6AG245300 Rh6AG245400 Rh6AG245800 Rh6BG055700 Rh6BG056000 Rh6BG062800 Rh6BG063100 Rh6BG063200 Rh6BG063300 Rh6BG247500 Rh6BG247600 Rh6BG247700 Rh6BG248200 Rh6BG249300 Rh6BG508200 Rh6DG034800 Rh6DG053300 Rh6DG053600 Rh6DG053700 Rh6DG059700 Rh6DG059800 Rh6DG082300 Rh6DG240400 Rh7AG202900 Rh7AG203000 Rh7AG407700 Rh7AG429300 Rh7BG202700 Rh7BG403000 Rh7CG213700 Rh7CG448100
rosa_wichuraiana Rw3G017790 Rw4G001400 Rw4G003730 Rw5G039000 Rw6G005550 Rw6G005570 Rw6G006160 Rw6G006180 Rw6G006200 Rw6G006220 Rw6G006250 Rw6G021280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 842
Acc16I TGCGCA 1 cut(s) 197
Acc36I ACCTGC 1 cut(s) 318
AccB1I GGYRCC 1 cut(s) 503
AccB7I CCANNNNNTGG 1 cut(s) 1108
AccI GTMKAC 1 cut(s) 151
AccII CGCG 1 cut(s) 1322
AciI CCGC 3 cut(s) 33, 972, 1322
AclI AACGTT 1 cut(s) 496
AclWI GGATC 3 cut(s) 352, 904, 1305
AcoI YGGCCR 1 cut(s) 814
AcsI RAATTY 2 cut(s) 469, 929
AcuI CTGAAG 1 cut(s) 537
AfaI GTAC 4 cut(s) 141, 645, 748, 1500
AfiI CCNNNNNNNGG 4 cut(s) 326, 419, 965, 1108
AgsI TTSAA 4 cut(s) 326, 341, 1022, 1447
AjiI CACGTC 1 cut(s) 772
AjnI CCWGG 5 cut(s) 86, 230, 613, 1068, 1290
AleI CACNNNNGTG 1 cut(s) 135
AluBI AGCT 9 cut(s) 264, 270, 519, 575, 694, 740, 1252, 1435, 1515
AluI AGCT 9 cut(s) 264, 270, 519, 575, 694, 740, 1252, 1435, 1515
Alw21I GWGCWC 2 cut(s) 217, 452
Alw26I GTCTC 3 cut(s) 86, 579, 612
AlwI GGATC 3 cut(s) 352, 904, 1305
AlwNI CAGNNNCTG 1 cut(s) 87
AoxI GGCC 1 cut(s) 814
ApeKI GCWGC 1 cut(s) 572
ApoI RAATTY 2 cut(s) 469, 929
ArsI GACNNNNNNTTYG 2 cut(s) 1028, 1060
Asp700I GAANNNNTTC 1 cut(s) 321
AspLEI GCGC 4 cut(s) 198, 532, 1283, 1322
AspS9I GGNCC 1 cut(s) 307
AsuHPI GGTGA 4 cut(s) 19, 908, 998, 1247
AvaII GGWCC 1 cut(s) 307
AxyI CCTNAGG 1 cut(s) 960
BaeI ACNNNNGTAYC 2 cut(s) 9, 42
BalI TGGCCA 1 cut(s) 816
BanI GGYRCC 1 cut(s) 503
BanII GRGCYC 1 cut(s) 427
Bbv12I GWGCWC 2 cut(s) 217, 452
BbvI GCAGC 1 cut(s) 584
BccI CCATC 9 cut(s) 112, 448, 466, 483, 921, 959, 1079, 1160, 1169
BceAI ACGGC 1 cut(s) 304
BciT130I CCWGG 5 cut(s) 88, 232, 615, 1070, 1292
BclI TGATCA 2 cut(s) 60, 363
BcoDI GTCTC 3 cut(s) 86, 579, 612
BfaI CTAG 6 cut(s) 210, 386, 404, 647, 863, 1185
BfmI CTRYAG 1 cut(s) 76
BfuAI ACCTGC 1 cut(s) 318
BglII AGATCT 1 cut(s) 382
BisI GCNGC 1 cut(s) 573
BlsI GCNGC 1 cut(s) 574
Bme1390I CCNGG 5 cut(s) 88, 232, 615, 1070, 1292
Bme18I GGWCC 1 cut(s) 307
BmgBI CACGTC 1 cut(s) 772
BmgT120I GGNCC 1 cut(s) 307
BmiI GGNNCC 3 cut(s) 424, 456, 505
BmrFI CCNGG 5 cut(s) 88, 232, 615, 1070, 1292
BmsI GCATC 1 cut(s) 640
BpmI CTGGAG 2 cut(s) 636, 1313
BpuEI CTTGAG 1 cut(s) 286
BsaAI YACGTR 1 cut(s) 143
BsaJI CCNNGG 5 cut(s) 86, 87, 230, 540, 702
BsaXI ACNNNNNCTCC 2 cut(s) 210, 240
Bsc4I CCNNNNNNNGG 4 cut(s) 326, 419, 965, 1108
Bse1I ACTGG 1 cut(s) 320
Bse21I CCTNAGG 1 cut(s) 960
Bse3DI GCAATG 1 cut(s) 566
BseBI CCWGG 5 cut(s) 88, 232, 615, 1070, 1292
BseDI CCNNGG 5 cut(s) 86, 87, 230, 540, 702
BseGI GGATG 7 cut(s) 366, 970, 1015, 1036, 1090, 1117, 1171
BseLI CCNNNNNNNGG 4 cut(s) 326, 419, 965, 1108
BseMI GCAATG 1 cut(s) 566
BseMII CTCAG 2 cut(s) 125, 951
BseNI ACTGG 1 cut(s) 320
BseRI GAGGAG 4 cut(s) 732, 1019, 1104, 1185
BseXI GCAGC 1 cut(s) 584
BsgI GTGCAG 1 cut(s) 628
Bsh1236I CGCG 1 cut(s) 1322
BshFI GGCC 1 cut(s) 816
BshNI GGYRCC 1 cut(s) 503
BsiHKAI GWGCWC 2 cut(s) 217, 452
BslFI GGGAC 2 cut(s) 848, 1318
BslI CCNNNNNNNGG 4 cut(s) 326, 419, 965, 1108
BsmAI GTCTC 3 cut(s) 86, 579, 612
BsmBI CGTCTC 1 cut(s) 579
BsmFI GGGAC 2 cut(s) 848, 1318
BsnI GGCC 1 cut(s) 816
Bsp1286I GDGCHC 3 cut(s) 217, 427, 452
BspACI CCGC 3 cut(s) 33, 972, 1322
BspANI GGCC 1 cut(s) 816
BspCNI CTCAG 2 cut(s) 126, 952
BspFNI CGCG 1 cut(s) 1322
BspHI TCATGA 2 cut(s) 715, 766
BspLI GGNNCC 3 cut(s) 424, 456, 505
BspMI ACCTGC 1 cut(s) 318
BspPI GGATC 3 cut(s) 352, 904, 1305
BspT107I GGYRCC 1 cut(s) 503
BsrDI GCAATG 1 cut(s) 566
BsrI ACTGG 1 cut(s) 320
BssECI CCNNGG 5 cut(s) 86, 87, 230, 540, 702
BssNAI GTATAC 1 cut(s) 152
BssT1I CCWWGG 1 cut(s) 702
Bst1107I GTATAC 1 cut(s) 152
Bst2UI CCWGG 5 cut(s) 88, 232, 615, 1070, 1292
Bst4CI ACNGT 3 cut(s) 187, 454, 1287
Bst6I CTCTTC 1 cut(s) 1456
BstAPI GCANNNNNTGC 1 cut(s) 168
BstBAI YACGTR 1 cut(s) 143
BstC8I GCNNGC 2 cut(s) 528, 692
BstDEI CTNAG 5 cut(s) 40, 134, 710, 960, 1511
BstF5I GGATG 7 cut(s) 366, 970, 1015, 1036, 1090, 1117, 1171
BstFNI CGCG 1 cut(s) 1322
BstHHI GCGC 4 cut(s) 198, 532, 1283, 1322
BstMAI GTCTC 3 cut(s) 86, 579, 612
BstMWI GCNNNNNNNGC 4 cut(s) 168, 261, 297, 1287
BstNI CCWGG 5 cut(s) 88, 232, 615, 1070, 1292
BstSCI CCNGG 5 cut(s) 86, 230, 613, 1068, 1290
BstSFI CTRYAG 1 cut(s) 76
BstUI CGCG 1 cut(s) 1322
BstV1I GCAGC 1 cut(s) 584
BstX2I RGATCY 2 cut(s) 344, 382
BstYI RGATCY 2 cut(s) 344, 382
BstZ17I GTATAC 1 cut(s) 152
Bsu36I CCTNAGG 1 cut(s) 960
BsuRI GGCC 1 cut(s) 816
BtrI CACGTC 1 cut(s) 772
BtsCI GGATG 7 cut(s) 366, 970, 1015, 1036, 1090, 1117, 1171
BtsI GCAGTG 1 cut(s) 169
BtsIMutI CAGTG 2 cut(s) 169, 817
BveI ACCTGC 1 cut(s) 318
Cac8I GCNNGC 2 cut(s) 528, 692
CaiI CAGNNNCTG 1 cut(s) 87
CciI TCATGA 2 cut(s) 715, 766
CfoI GCGC 4 cut(s) 198, 532, 1283, 1322
Cfr13I GGNCC 1 cut(s) 307
CseI GACGC 2 cut(s) 596, 846
Csp6I GTAC 4 cut(s) 140, 644, 747, 1499
CspCI CAANNNNNGTGG 2 cut(s) 314, 349
CviQI GTAC 4 cut(s) 140, 644, 747, 1499
DdeI CTNAG 5 cut(s) 40, 134, 710, 960, 1511
DrdI GACNNNNNNGTC 1 cut(s) 842
DseDI GACNNNNNNGTC 1 cut(s) 842
EaeI YGGCCR 1 cut(s) 814
Eam1104I CTCTTC 1 cut(s) 1456
EarI CTCTTC 1 cut(s) 1456
Eco130I CCWWGG 1 cut(s) 702
Eco24I GRGCYC 1 cut(s) 427
Eco32I GATATC 3 cut(s) 205, 547, 1099
Eco47I GGWCC 1 cut(s) 307
Eco57I CTGAAG 1 cut(s) 537
Eco81I CCTNAGG 1 cut(s) 960
EcoRII CCWGG 5 cut(s) 86, 230, 613, 1068, 1290
EcoRV GATATC 3 cut(s) 205, 547, 1099
EcoT14I CCWWGG 1 cut(s) 702
EcoT38I GRGCYC 1 cut(s) 427
ErhI CCWWGG 1 cut(s) 702
Esp3I CGTCTC 1 cut(s) 579
FalI AAGNNNNNCTT 2 cut(s) 713, 745
FaqI GGGAC 2 cut(s) 848, 1318
FauI CCCGC 1 cut(s) 1315
FbaI TGATCA 2 cut(s) 60, 363
FblI GTMKAC 1 cut(s) 151
Fnu4HI GCNGC 1 cut(s) 573
FokI GGATG 7 cut(s) 373, 977, 1022, 1043, 1097, 1124, 1178
FriOI GRGCYC 1 cut(s) 427
Fsp4HI GCNGC 1 cut(s) 573
FspBI CTAG 6 cut(s) 210, 386, 404, 647, 863, 1185
FspI TGCGCA 1 cut(s) 197
GlaI GCGC 4 cut(s) 197, 531, 1282, 1321
GluI GCNGC 1 cut(s) 573
GsuI CTGGAG 2 cut(s) 636, 1313
HaeIII GGCC 1 cut(s) 816
HgaI GACGC 2 cut(s) 596, 846
HhaI GCGC 4 cut(s) 198, 532, 1283, 1322
Hin6I GCGC 4 cut(s) 196, 530, 1281, 1320
HinP1I GCGC 4 cut(s) 196, 530, 1281, 1320
HindIII AAGCTT 1 cut(s) 1250
HinfI GANTC 5 cut(s) 389, 807, 866, 881, 1124
HphI GGTGA 4 cut(s) 19, 908, 998, 1247
Hpy166II GTNNAC 4 cut(s) 140, 152, 537, 1246
Hpy188I TCNGA 3 cut(s) 544, 556, 1527
Hpy188III TCNNGA 6 cut(s) 386, 420, 716, 767, 1205, 1430
Hpy8I GTNNAC 4 cut(s) 140, 152, 537, 1246
Hpy99I CGWCG 1 cut(s) 953
HpyAV CCTTC 6 cut(s) 335, 719, 983, 1016, 1346, 1358
HpyCH4III ACNGT 3 cut(s) 187, 454, 1287
HpyCH4IV ACGT 3 cut(s) 142, 496, 771
HpyCH4V TGCA 5 cut(s) 171, 609, 922, 1343, 1385
HpyF10VI GCNNNNNNNGC 4 cut(s) 168, 261, 297, 1287
HpyF3I CTNAG 5 cut(s) 40, 134, 710, 960, 1511
HpySE526I ACGT 3 cut(s) 142, 496, 771
HspAI GCGC 4 cut(s) 196, 530, 1281, 1320
Ksp22I TGATCA 2 cut(s) 60, 363
LmnI GCTCC 3 cut(s) 220, 422, 745
Lsp1109I GCAGC 1 cut(s) 584
LweI GCATC 1 cut(s) 640
MaeI CTAG 6 cut(s) 210, 386, 404, 647, 863, 1185
MaeII ACGT 3 cut(s) 142, 496, 771
MaeIII GTNAC 2 cut(s) 858, 1205
MflI RGATCY 2 cut(s) 344, 382
MhlI GDGCHC 3 cut(s) 217, 427, 452
MlsI TGGCCA 1 cut(s) 816
MluCI AATT 5 cut(s) 469, 776, 929, 938, 1369
MluNI TGGCCA 1 cut(s) 816
MlyI GAGTC 3 cut(s) 860, 890, 1118
MmeI TCCRAC 4 cut(s) 285, 338, 608, 1341
Mox20I TGGCCA 1 cut(s) 816
MroXI GAANNNNTTC 1 cut(s) 321
MscI TGGCCA 1 cut(s) 816
MseI TTAA 6 cut(s) 158, 236, 752, 1212, 1467, 1521
MslI CAYNNNNRTG 3 cut(s) 116, 135, 371
Msp20I TGGCCA 1 cut(s) 816
MspR9I CCNGG 5 cut(s) 88, 232, 615, 1070, 1292
MvaI CCWGG 5 cut(s) 88, 232, 615, 1070, 1292
MvnI CGCG 1 cut(s) 1322
MwoI GCNNNNNNNGC 4 cut(s) 168, 261, 297, 1287
NlaIV GGNNCC 3 cut(s) 424, 456, 505
NmuCI GTSAC 2 cut(s) 858, 1205
NsbI TGCGCA 1 cut(s) 197
OliI CACNNNNGTG 1 cut(s) 135
PagI TCATGA 2 cut(s) 715, 766
PasI CCCWGGG 1 cut(s) 87
PdmI GAANNNNTTC 1 cut(s) 321
PfeI GAWTC 2 cut(s) 389, 807
PflMI CCANNNNNTGG 1 cut(s) 1108
PkrI GCNGC 1 cut(s) 574
PleI GAGTC 3 cut(s) 860, 889, 1118
PpsI GAGTC 3 cut(s) 860, 889, 1118
Ppu21I YACGTR 1 cut(s) 143
Psp1406I AACGTT 1 cut(s) 496
Psp6I CCWGG 5 cut(s) 86, 230, 613, 1068, 1290
PspGI CCWGG 5 cut(s) 86, 230, 613, 1068, 1290
PspN4I GGNNCC 3 cut(s) 424, 456, 505
PspPI GGNCC 1 cut(s) 307
PstNI CAGNNNCTG 1 cut(s) 87
PsuI RGATCY 2 cut(s) 344, 382
RsaI GTAC 4 cut(s) 141, 645, 748, 1500
RsaNI GTAC 4 cut(s) 140, 644, 747, 1499
RseI CAYNNNNRTG 3 cut(s) 116, 135, 371
SaqAI TTAA 6 cut(s) 158, 236, 752, 1212, 1467, 1521
SatI GCNGC 1 cut(s) 573
Sau96I GGNCC 1 cut(s) 307
SchI GAGTC 3 cut(s) 860, 890, 1118
ScrFI CCNGG 5 cut(s) 88, 232, 615, 1070, 1292
SduI GDGCHC 3 cut(s) 217, 427, 452
SfaNI GCATC 1 cut(s) 640
SfcI CTRYAG 1 cut(s) 76
SinI GGWCC 1 cut(s) 307
SmiMI CAYNNNNRTG 3 cut(s) 116, 135, 371
SmlI CTYRAG 1 cut(s) 265
SmoI CTYRAG 1 cut(s) 265
Sse9I AATT 5 cut(s) 469, 776, 929, 938, 1369
SsiI CCGC 3 cut(s) 33, 972, 1322
SspMI CTAG 6 cut(s) 210, 386, 404, 647, 863, 1185
StyD4I CCNGG 5 cut(s) 86, 230, 613, 1068, 1290
StyI CCWWGG 1 cut(s) 702
TaaI ACNGT 3 cut(s) 187, 454, 1287
TaiI ACGT 3 cut(s) 145, 499, 774
TaqI TCGA 3 cut(s) 1400, 1429, 1507
TasI AATT 5 cut(s) 469, 776, 929, 938, 1369
TfiI GAWTC 2 cut(s) 389, 807
Tru1I TTAA 6 cut(s) 158, 236, 752, 1212, 1467, 1521
Tru9I TTAA 6 cut(s) 158, 236, 752, 1212, 1467, 1521
TscAI CASTG 2 cut(s) 169, 817
TseFI GTSAC 2 cut(s) 858, 1205
TseI GCWGC 1 cut(s) 572
Tsp45I GTSAC 2 cut(s) 858, 1205
TspDTI ATGAA 2 cut(s) 837, 950
TspRI CASTG 2 cut(s) 169, 817
Van91I CCANNNNNTGG 1 cut(s) 1108
VpaK11BI GGWCC 1 cut(s) 307
XapI RAATTY 2 cut(s) 469, 929
XbaI TCTAGA 1 cut(s) 385
XmiI GTMKAC 1 cut(s) 151
XmnI GAANNNNTTC 1 cut(s) 321
XspI CTAG 6 cut(s) 210, 386, 404, 647, 863, 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.