AT1G04470

Munc13 homology 1 (InterPro IPR014770), Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014182
Physical Location & Seq
Reverse (-)
1210924 .. 1214841
3918 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G04470.1

Sequence Viewer

Length: 3108 bp
ATGGTTCGTCATTCTCGGAGGGAGTCCTTTTTCGACATGGTTGGCTTTGAGGTTTGTCCTGATACCGATCTTCTTTGGCCATTCGGGAAGCTTGATGGTCTTGATCGGGATGAAATCCGTGAAACCGCGTATGAGATCTTTTTCGCCGCATGTCGATCATCACCTGGATTTGGAGGTAGAAATGCTCTCACATTCTACTCCAAGCACAATGCTGGTGACCATCAAGGGGATGGAATAGGAGGAGGAGGAGGATCTGGATCATCTAACGGCTCTGGATTCGGGTCTTTAGGAAGAAAAGAAGTGTTGACAACACCAACAAGCCGAGTAAAACGGGCGCTAGGGTTAAAGATGCTTAAACGATCTCCTTCTAGGCGAATGTCGACAGTAGGGACAGTTGTAGGGGCCGTCTCAGCTCCTTCATCCCCAGGTAATAATGGAAGCATAGGAAGTGGTTCAGGACACTTTAGCCCTGGGGCTGGGTTTTTTACAGTCCCGCCTGCTCGGCCTCGACGACCGTTAACCTCTGCAGAAATCATGAGGCAGCAAATGAAGGTGACAGAACAGAGTGACACTCGGCTACGGAAAACCCTAATGAGGACGCTTGTTGGCCAAACCGGTAGGCGAGCAGAGACAATAATCCTTCCGTTAGAGCTTCTCCGTCACGTGAAACCATCGGAGTTTGGTGATGTACATGAGTATCAAATTTGGCAAAGACGGCAACTCAAAGTCCTTGAAGCTGGTCTTCTCATTCACCCATCAATCCCTCTAGAGAAGACCAACAACTTTGCAATGCGTCTCCGAGAAATCATCCGCCAGAGTGAGACAAAAGCCATCGACACTAGCAAAAACTCAGACATAATGCCGACATTATGTAACCTTGTCGCCTCCTTGTCATGGCGCAACGCTACTCCAACAACCGATATATGCCATTGGGCTGATGGATACCCACTTAACATCCATCTCTATGTGGCGCTTTTGCAGTCGATATTTGACATACGTGATGAGACCTTGGTTCTTGATGAAATCGATGAGCTTTTAGAACTGATGAAGAAGACATGGATAATGTTGGGGATCACACGAGCTATACATAACTTGTGTTTCACTTGGGTTCTGTTTCATCAGTACATTGTGACATCACAGATGGAGCCAGACTTGCTTGGTGCCTCTCACGCCATGTTGGCTGAAGTTGCCAATGACGCCAAGAAGTCTGATCGCGAGGCTCTTTACGTGAAGCTCTTGACCTCGACATTGGCCTCTATGCAAGGATGGACTGAAAAAAGGTTGTTGAGCTATCATGATTATTTTCAACGAGGGAACGTGGGATTGATCGAGAATCTTCTGCCATTAGCGTTGTCTTCTTCTAAGATCTTGGGGGAGGACGTGACAATCTCTCAAATGAATGGTCTAGAGAAAGGTGATGTGAAATTGGTGGATTCTTCAGGGGATCGCGTCGATTACTATATAAGAGCATCTATTAAAAACGCCTTCTCAAAGGTAATAGAAAACATGAAGGCCGAAATCGAAGAAACAGAGGAAGGAGAAGAAGAAGCGGCAACTATGTTGCTTCGGCTAGCTAAGGAGACAGAGGATCTTGCTTTGCGCGAGAGCGAGTGTTTTAGCCCGATACTTAAGAGATGGCACTTGGTTGCAGCTGGAGTCGCCTCGGTTTCGCTTCACCAATGTTATGGTTCCATCTTGATGCAGTACTTAGCTGGTCGATCGACAATCACTAAAGAGACTGTTGAAGTTCTGCAAACTGCGGGGAAGCTCGAAAAGGTTCTTGTGCAGATGGTGGCAGAGAATTCAGATGAATGTGAAGATGGCGGTAAAGGCCTTGTTAGAGAGATGGTTCCGTATGAAGTCGATTCGATTATCTTACGACTACTAAGGCAATGGATTGAAGAGAAGTTACAAACAGTTCAAGAATGTTTGAGCAGAGCAAAAGAAGCTGAAACATGGAACCCGAAATCAAAATCAGAACCCTATGCACAATCTGCTGGAGAGTTGATGAAGCTAGCGAATGATGCAATCGAGGAGTTCTTTGAGATCCCTATTGGGATTACAGAGGATCTTGTTCATGATCTTGCTGAAGGATTAGAAAAACTCTTCCAAGAATACACCACATTCGTAGCATCTTGTGGTTCAAAACAGAGTTACATTCCTACGCTTCCTCCACTTACAAGATGTAACCGAGACTCAAAGTTCGTGAAGCTTTGGAAGAAAGCCACGCCATGTGCTGCCTCGGGAGAAGAACTTAACCAAATGGGTGAAGCCCCAGGTGGCAACCACCCGCGTCCTTCCACTAGCCGAGGAACCCAACGCCTCTACATTCGTCTCAACACTTTACATTTCCTAAGCTCACAACTTCACTCTCTCAACAAATCCCTCTCACTCAACCCGAGGGTCCTCCCCGCGACGCGAAAACGCTGCCGCGAACGGACCAAATCATCGTCTTATTTCGAATTCACTCAAGCAGGAATCGAATCTGCATGCCAACATGTCTCTGAGGTTGCAGCTTACCGGTTAATCTTCCTAGACTCATACTCTGTATTCTACGAAAGCCTATACCCCGGAGATGTCGCGAACGGGAGGATCAAACCCGCGTTGCGAATCTTGAAACAGAACTTAACGTTAATGACCGCGATTCTTGCGGACAAAGCGCAAGCATTGGCGATGAAAGAAGTCATGAAGGCTTCATTCGAAGTCGTTTTGACGGTTCTTCTCGCGGGAGGACATTCCCGAGTTTTCTGTCGAACAGATCACGATTTGATCGAGGAAGATTTCGAGAGTTTGAAGAAGGTTTATTGCACTTGCGGCGAAGGACTAATCCCAGAGGAAGTGGTGGATAGAGAGGCAGAGACAGTTGAAGGAGTGATTCAGCTTATGGGCCAACCAACAGAACAACTTATGGAAGACTTTAGCATCGTGACATGCGAGTCAAGCGGAATGGGTTTGGTTGGGACAGGACAAAAACTTCCAATGCCTCCAACGACTGGACGATGGAACAGGTCGGATCCAAACACGATTTTGCGAGTTCTTTGCTATAGAGACGATCGTGTGGCTAATCAGTTTTTGAAAAAATCGTTTCAATTGGGTAAACGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1035

Amino Acids

115.47

Weight (kDa)

6.47

Isoelectric Point (pI)

48.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 625 - 1035 3.2e-177 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04470 AT2G33420
fragaria_vesca FvH4_4g04280 FvH4_4g04280
malus_domestica MD13G1219000.v1.1 MD16G1224300.v1.1
prunus_persica Prupe.1G045700_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0394731
rosa_laevigata RLG00000009667
rosa_multiflora Rmu_sc0005356.1_g000011
rosa_roxburghii Rroxscaffold_5G00339750
rosa_rugosa Rorug03G0362100.1
rosa_samantha Rh4AG054800 Rh4BG052500 Rh4CG059300 Rh4DG051100
rosa_wichuraiana Rw4G004370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2935
AccB1I GGYRCC 1 cut(s) 1160
AccB7I CCANNNNNTGG 1 cut(s) 2993
AccI GTMKAC 1 cut(s) 380
AclI AACGTT 1 cut(s) 2630
AcoI YGGCCR 2 cut(s) 77, 607
AcsI RAATTY 3 cut(s) 702, 1801, 2462
AcuI CTGAAG 3 cut(s) 1203, 1422, 2109
AcvI CACGTG 1 cut(s) 664
AcyI GRCGYC 1 cut(s) 1197
AfaI GTAC 3 cut(s) 690, 1124, 1706
AfiI CCNNNNNNNGG 6 cut(s) 170, 226, 476, 594, 894, 2993
AflII CTTAAG 1 cut(s) 1628
AflIII ACRYGT 1 cut(s) 2497
AgeI ACCGGT 2 cut(s) 614, 2520
AjiI CACGTC 1 cut(s) 1381
AjnI CCWGG 4 cut(s) 163, 424, 469, 2275
Ama87I CYCGRG 3 cut(s) 2242, 2398, 2739
AoxI GGCC 8 cut(s) 77, 402, 503, 607, 1251, 1512, 1831, 2887
ApeKI GCWGC 5 cut(s) 541, 1649, 2237, 2427, 2513
ApoI RAATTY 3 cut(s) 702, 1801, 2462
ArsI GACNNNNNNTTYG 4 cut(s) 1387, 1419, 2186, 2218
AsiGI ACCGGT 2 cut(s) 614, 2520
Asp700I GAANNNNTTC 2 cut(s) 451, 1776
AspLEI GCGC 5 cut(s) 337, 900, 973, 1602, 2662
AspS9I GGNCC 4 cut(s) 402, 2404, 2439, 2887
AsuC2I CCSGG 1 cut(s) 2571
AsuHPI GGTGA 8 cut(s) 153, 227, 565, 695, 743, 1427, 1667, 2279
AsuII TTCGAA 2 cut(s) 2460, 2700
AsuNHI GCTAGC 2 cut(s) 1570, 2014
AvaI CYCGRG 3 cut(s) 2242, 2398, 2739
AvaII GGWCC 2 cut(s) 2404, 2439
BaeI ACNNNNGTAYC 2 cut(s) 680, 713
BalI TGGCCA 2 cut(s) 79, 609
BamHI GGATCC 1 cut(s) 3013
BanI GGYRCC 1 cut(s) 1160
BarI GAAGNNNNNNTAC 2 cut(s) 1893, 1925
BauI CACGAG 1 cut(s) 1077
BbrPI CACGTG 1 cut(s) 664
BbsI GAAGAC 5 cut(s) 734, 779, 1058, 1347, 2919
BbvI GCAGC 5 cut(s) 553, 1661, 2224, 2414, 2525
BceAI ACGGC 3 cut(s) 283, 389, 731
BcgI CGANNNNNNTGC 4 cut(s) 2409, 2443, 3021, 3055
BciT130I CCWGG 4 cut(s) 165, 426, 471, 2277
BciVI GTATCC 1 cut(s) 935
BcnI CCSGG 1 cut(s) 2571
BfaI CTAG 9 cut(s) 338, 369, 767, 840, 1406, 1571, 2015, 2304, 2534
BfmI CTRYAG 2 cut(s) 525, 3043
BfoI RGCGCY 2 cut(s) 338, 974
BfrI CTTAAG 1 cut(s) 1628
BfuI GTATCC 1 cut(s) 935
BglI GCCNNNNNGGC 2 cut(s) 502, 1178
BglII AGATCT 2 cut(s) 135, 1365
BisI GCNGC 9 cut(s) 147, 542, 1551, 1650, 2238, 2428, 2431, 2514, 2815
BlsI GCNGC 9 cut(s) 148, 543, 1552, 1651, 2239, 2429, 2432, 2515, 2816
BmcAI AGTACT 1 cut(s) 1706
Bme1390I CCNGG 5 cut(s) 165, 426, 471, 2277, 2571
Bme18I GGWCC 2 cut(s) 2404, 2439
BmeT110I CYCGRG 3 cut(s) 2242, 2398, 2739
BmgBI CACGTC 1 cut(s) 1381
BmgT120I GGNCC 4 cut(s) 402, 2404, 2439, 2887
BmiI GGNNCC 9 cut(s) 403, 1146, 1162, 1690, 1851, 1961, 2314, 2405, 3015
BmrFI CCNGG 5 cut(s) 165, 426, 471, 2277, 2571
BmsI GCATC 6 cut(s) 339, 1478, 1689, 2014, 2141, 2931
BmtI GCTAGC 2 cut(s) 1574, 2018
BpiI GAAGAC 5 cut(s) 734, 779, 1058, 1347, 2919
BplI GAGNNNNNCTC 2 cut(s) 556, 588
BpmI CTGGAG 2 cut(s) 1674, 2019
Bpu10I CCTNAGC 2 cut(s) 1575, 2354
Bpu14I TTCGAA 2 cut(s) 2460, 2700
BpuEI CTTGAG 1 cut(s) 2454
BpuMI CCSGG 1 cut(s) 2571
Bsa29I ATCGAT 1 cut(s) 1026
BsaAI YACGTR 3 cut(s) 664, 998, 1228
BsaBI GATNNNNATC 2 cut(s) 66, 256
BsaHI GRCGYC 1 cut(s) 1197
BsaI GGTCTC 1 cut(s) 998
BsaWI WCCGGW 2 cut(s) 614, 2520
BsaXI ACNNNNNCTCC 2 cut(s) 2155, 2185
Bsc4I CCNNNNNNNGG 6 cut(s) 170, 226, 476, 594, 894, 2993
Bse118I RCCGGY 2 cut(s) 614, 2520
Bse1I ACTGG 1 cut(s) 2998
Bse3DI GCAATG 2 cut(s) 795, 1898
Bse8I GATNNNNATC 2 cut(s) 66, 256
BseBI CCWGG 4 cut(s) 165, 426, 471, 2277
BseCI ATCGAT 1 cut(s) 1026
BseGI GGATG 6 cut(s) 115, 235, 419, 807, 954, 1271
BseJI GATNNNNATC 2 cut(s) 66, 256
BseLI CCNNNNNNNGG 6 cut(s) 170, 226, 476, 594, 894, 2993
BseMI GCAATG 2 cut(s) 795, 1898
BseMII CTCAG 3 cut(s) 423, 864, 2496
BseNI ACTGG 1 cut(s) 2998
BseRI GAGGAG 4 cut(s) 255, 258, 261, 2048
BseXI GCAGC 5 cut(s) 553, 1661, 2224, 2414, 2525
BseYI CCCAGC 1 cut(s) 476
BsgI GTGCAG 1 cut(s) 1805
Bsh1285I CGRYCG 3 cut(s) 515, 1721, 3055
BshFI GGCC 8 cut(s) 79, 404, 505, 609, 1253, 1514, 1833, 2889
BshNI GGYRCC 1 cut(s) 1160
BshTI ACCGGT 2 cut(s) 614, 2520
BshVI ATCGAT 1 cut(s) 1026
BsiEI CGRYCG 3 cut(s) 515, 1721, 3055
BsiHKCI CYCGRG 3 cut(s) 2242, 2398, 2739
BsiSI CCGG 3 cut(s) 615, 2521, 2571
BslFI GGGAC 3 cut(s) 403, 476, 2974
BslI CCNNNNNNNGG 6 cut(s) 170, 226, 476, 594, 894, 2993
BsmBI CGTCTC 4 cut(s) 412, 800, 2339, 3042
BsmFI GGGAC 3 cut(s) 403, 476, 2974
BsnI GGCC 8 cut(s) 79, 404, 505, 609, 1253, 1514, 1833, 2889
Bso31I GGTCTC 1 cut(s) 998
BsoBI CYCGRG 3 cut(s) 2242, 2398, 2739
Bsp119I TTCGAA 2 cut(s) 2460, 2700
Bsp1407I TGTACA 1 cut(s) 688
Bsp68I TCGCGA 2 cut(s) 1215, 2582
BspANI GGCC 8 cut(s) 79, 404, 505, 609, 1253, 1514, 1833, 2889
BspCNI CTCAG 3 cut(s) 422, 863, 2497
BspDI ATCGAT 1 cut(s) 1026
BspHI TCATGA 4 cut(s) 534, 1294, 2077, 2685
BspLI GGNNCC 9 cut(s) 403, 1146, 1162, 1690, 1851, 1961, 2314, 2405, 3015
BspMAI CTGCAG 1 cut(s) 529
BspOI GCTAGC 2 cut(s) 1574, 2018
BspT104I TTCGAA 2 cut(s) 2460, 2700
BspT107I GGYRCC 1 cut(s) 1160
BspTI CTTAAG 1 cut(s) 1628
BspTNI GGTCTC 1 cut(s) 998
BsrDI GCAATG 2 cut(s) 795, 1898
BsrFI RCCGGY 2 cut(s) 614, 2520
BsrGI TGTACA 1 cut(s) 688
BsrI ACTGG 1 cut(s) 2998
BssAI RCCGGY 2 cut(s) 614, 2520
BssNI GRCGYC 1 cut(s) 1197
BssSI CACGAG 1 cut(s) 1077
BssT1I CCWWGG 1 cut(s) 1008
Bst2BI CACGAG 1 cut(s) 1077
Bst2UI CCWGG 4 cut(s) 165, 426, 471, 2277
Bst4CI ACNGT 8 cut(s) 385, 394, 490, 516, 1741, 1918, 2716, 2863
Bst6I CTCTTC 2 cut(s) 1896, 2111
BstACI GRCGYC 1 cut(s) 1197
BstAFI CTTAAG 1 cut(s) 1628
BstAPI GCANNNNNTGC 1 cut(s) 1994
BstAUI TGTACA 1 cut(s) 688
BstBAI YACGTR 3 cut(s) 664, 998, 1228
BstBI TTCGAA 2 cut(s) 2460, 2700
BstC8I GCNNGC 6 cut(s) 498, 624, 1572, 2016, 2491, 2664
BstDEI CTNAG 8 cut(s) 409, 850, 1362, 1575, 1708, 1886, 2354, 2505
BstEII GGTNACC 1 cut(s) 215
BstF5I GGATG 6 cut(s) 115, 235, 419, 807, 954, 1271
BstH2I RGCGCY 2 cut(s) 338, 974
BstHHI GCGC 5 cut(s) 337, 900, 973, 1602, 2662
BstMCI CGRYCG 3 cut(s) 515, 1721, 3055
BstNI CCWGG 4 cut(s) 165, 426, 471, 2277
BstNSI RCATGY 4 cut(s) 153, 2493, 2501, 2934
BstPI GGTNACC 1 cut(s) 215
BstSCI CCNGG 5 cut(s) 163, 424, 469, 2275, 2569
BstSFI CTRYAG 2 cut(s) 525, 3043
BstV1I GCAGC 5 cut(s) 553, 1661, 2224, 2414, 2525
BstV2I GAAGAC 5 cut(s) 734, 779, 1058, 1347, 2919
BstX2I RGATCY 7 cut(s) 135, 251, 1365, 1588, 2046, 2068, 3013
BstXI CCANNNNNNTGG 1 cut(s) 1685
BstYI RGATCY 7 cut(s) 135, 251, 1365, 1588, 2046, 2068, 3013
Bsu15I ATCGAT 1 cut(s) 1026
BsuI GTATCC 1 cut(s) 935
BsuRI GGCC 8 cut(s) 79, 404, 505, 609, 1253, 1514, 1833, 2889
BsuTUI ATCGAT 1 cut(s) 1026
BtgZI GCGATG 1 cut(s) 2687
BtrI CACGTC 1 cut(s) 1381
BtsCI GGATG 6 cut(s) 115, 235, 419, 807, 954, 1271
BtuMI TCGCGA 2 cut(s) 1215, 2582
Cac8I GCNNGC 6 cut(s) 498, 624, 1572, 2016, 2491, 2664
CciI TCATGA 4 cut(s) 534, 1294, 2077, 2685
CfoI GCGC 5 cut(s) 337, 900, 973, 1602, 2662
Cfr10I RCCGGY 2 cut(s) 614, 2520
Cfr13I GGNCC 4 cut(s) 402, 2404, 2439, 2887
ClaI ATCGAT 1 cut(s) 1026
CseI GACGC 6 cut(s) 607, 782, 1205, 1438, 2282, 2425
Csp6I GTAC 3 cut(s) 689, 1123, 1705
CspAI ACCGGT 2 cut(s) 614, 2520
CviQI GTAC 3 cut(s) 689, 1123, 1705
DdeI CTNAG 8 cut(s) 409, 850, 1362, 1575, 1708, 1886, 2354, 2505
DrdI GACNNNNNNGTC 1 cut(s) 2935
DseDI GACNNNNNNGTC 1 cut(s) 2935
EaeI YGGCCR 2 cut(s) 77, 607
Eam1104I CTCTTC 2 cut(s) 1896, 2111
EarI CTCTTC 2 cut(s) 1896, 2111
EciI GGCGGA 1 cut(s) 800
Eco130I CCWWGG 1 cut(s) 1008
Eco147I AGGCCT 1 cut(s) 1833
Eco31I GGTCTC 1 cut(s) 998
Eco47I GGWCC 2 cut(s) 2404, 2439
Eco57I CTGAAG 3 cut(s) 1203, 1422, 2109
Eco72I CACGTG 1 cut(s) 664
Eco88I CYCGRG 3 cut(s) 2242, 2398, 2739
Eco91I GGTNACC 1 cut(s) 215
EcoO109I RGGNCCY 1 cut(s) 2404
EcoO65I GGTNACC 1 cut(s) 215
EcoRI GAATTC 2 cut(s) 1801, 2462
EcoRII CCWGG 4 cut(s) 163, 424, 469, 2275
EcoT14I CCWWGG 1 cut(s) 1008
ErhI CCWWGG 1 cut(s) 1008
Esp3I CGTCTC 4 cut(s) 412, 800, 2339, 3042
FalI AAGNNNNNCTT 2 cut(s) 726, 758
FaqI GGGAC 3 cut(s) 403, 476, 2974
FauI CCCGC 6 cut(s) 501, 1753, 2298, 2419, 2608, 2719
FblI GTMKAC 1 cut(s) 380
Fnu4HI GCNGC 9 cut(s) 147, 542, 1551, 1650, 2238, 2428, 2431, 2514, 2815
FokI GGATG 6 cut(s) 122, 242, 406, 794, 941, 1278
Fsp4HI GCNGC 9 cut(s) 147, 542, 1551, 1650, 2238, 2428, 2431, 2514, 2815
FspBI CTAG 9 cut(s) 338, 369, 767, 840, 1406, 1571, 2015, 2304, 2534
GlaI GCGC 5 cut(s) 336, 899, 972, 1601, 2661
GluI GCNGC 9 cut(s) 147, 542, 1551, 1650, 2238, 2428, 2431, 2514, 2815
GsaI CCCAGC 1 cut(s) 480
GsuI CTGGAG 2 cut(s) 1674, 2019
HaeII RGCGCY 2 cut(s) 338, 974
HaeIII GGCC 8 cut(s) 79, 404, 505, 609, 1253, 1514, 1833, 2889
HapII CCGG 3 cut(s) 615, 2521, 2571
HgaI GACGC 6 cut(s) 607, 782, 1205, 1438, 2282, 2425
HhaI GCGC 5 cut(s) 337, 900, 973, 1602, 2662
Hin1I GRCGYC 1 cut(s) 1197
Hin6I GCGC 5 cut(s) 335, 898, 971, 1600, 2660
HinP1I GCGC 5 cut(s) 335, 898, 971, 1600, 2660
HincII GTYRAC 3 cut(s) 306, 381, 519
HindII GTYRAC 3 cut(s) 306, 381, 519
HindIII AAGCTT 2 cut(s) 89, 2210
HpaI GTTAAC 1 cut(s) 519
HpaII CCGG 3 cut(s) 615, 2521, 2571
HphI GGTGA 8 cut(s) 153, 227, 565, 695, 743, 1427, 1667, 2279
Hpy166II GTNNAC 4 cut(s) 306, 381, 519, 3098
Hpy188I TCNGA 9 cut(s) 18, 676, 800, 853, 1210, 1807, 1978, 2506, 3013
Hpy8I GTNNAC 4 cut(s) 306, 381, 519, 3098
Hpy99I CGWCG 3 cut(s) 513, 1454, 2419
HpyCH4III ACNGT 8 cut(s) 385, 394, 490, 516, 1741, 1918, 2716, 2863
HpyCH4IV ACGT 6 cut(s) 663, 997, 1227, 1317, 1380, 2630
HpyF3I CTNAG 8 cut(s) 409, 850, 1362, 1575, 1708, 1886, 2354, 2505
HpySE526I ACGT 6 cut(s) 663, 997, 1227, 1317, 1380, 2630
Hsp92I GRCGYC 1 cut(s) 1197
HspAI GCGC 5 cut(s) 335, 898, 971, 1600, 2660
KspAI GTTAAC 1 cut(s) 519
LmnI GCTCC 2 cut(s) 418, 1144
Lsp1109I GCAGC 5 cut(s) 553, 1661, 2224, 2414, 2525
LweI GCATC 6 cut(s) 339, 1478, 1689, 2014, 2141, 2931
MaeI CTAG 9 cut(s) 338, 369, 767, 840, 1406, 1571, 2015, 2304, 2534
MaeII ACGT 6 cut(s) 663, 997, 1227, 1317, 1380, 2630
MfeI CAATTG 1 cut(s) 3089
MflI RGATCY 7 cut(s) 135, 251, 1365, 1588, 2046, 2068, 3013
MlsI TGGCCA 2 cut(s) 79, 609
MluCI AATT 5 cut(s) 702, 1424, 1801, 2462, 3089
MluNI TGGCCA 2 cut(s) 79, 609
MlyI GAGTC 5 cut(s) 32, 1665, 2189, 2531, 2945
MmeI TCCRAC 3 cut(s) 935, 2991, 3011
Mox20I TGGCCA 2 cut(s) 79, 609
MroXI GAANNNNTTC 2 cut(s) 451, 1776
MscI TGGCCA 2 cut(s) 79, 609
MslI CAYNNNNRTG 2 cut(s) 963, 1697
Msp20I TGGCCA 2 cut(s) 79, 609
MspA1I CMGCKG 1 cut(s) 1652
MspCI CTTAAG 1 cut(s) 1628
MspI CCGG 3 cut(s) 615, 2521, 2571
MspR9I CCNGG 5 cut(s) 165, 426, 471, 2277, 2571
MunI CAATTG 1 cut(s) 3089
MvaI CCWGG 4 cut(s) 165, 426, 471, 2277
NciI CCSGG 1 cut(s) 2571
NheI GCTAGC 2 cut(s) 1570, 2014
NlaIV GGNNCC 9 cut(s) 403, 1146, 1162, 1690, 1851, 1961, 2314, 2405, 3015
NmeAIII GCCGAG 4 cut(s) 347, 481, 553, 2333
NmuCI GTSAC 7 cut(s) 215, 553, 566, 659, 1129, 1381, 2926
NruI TCGCGA 2 cut(s) 1215, 2582
NspI RCATGY 4 cut(s) 153, 2493, 2501, 2934
NspV TTCGAA 2 cut(s) 2460, 2700
PaeI GCATGC 1 cut(s) 2493
PagI TCATGA 4 cut(s) 534, 1294, 2077, 2685
PasI CCCWGGG 1 cut(s) 470
PceI AGGCCT 1 cut(s) 1833
PciI ACATGT 1 cut(s) 2497
PcsI WCGNNNNNNNCGW 3 cut(s) 508, 2769, 2931
PdmI GAANNNNTTC 2 cut(s) 451, 1776
PfeI GAWTC 9 cut(s) 276, 1333, 1433, 1865, 2478, 2483, 2610, 2644, 2875
PflMI CCANNNNNTGG 1 cut(s) 2993
PinAI ACCGGT 2 cut(s) 614, 2520
PkrI GCNGC 9 cut(s) 148, 543, 1552, 1651, 2239, 2429, 2432, 2515, 2816
Ple19I CGATCG 2 cut(s) 1721, 3055
PleI GAGTC 5 cut(s) 31, 1664, 2189, 2531, 2944
PmaCI CACGTG 1 cut(s) 664
PmlI CACGTG 1 cut(s) 664
PpsI GAGTC 5 cut(s) 31, 1664, 2189, 2531, 2944
Ppu21I YACGTR 3 cut(s) 664, 998, 1228
PpuMI RGGWCCY 1 cut(s) 2404
PscI ACATGT 1 cut(s) 2497
Psp1406I AACGTT 1 cut(s) 2630
Psp5II RGGWCCY 1 cut(s) 2404
Psp6I CCWGG 4 cut(s) 163, 424, 469, 2275
PspCI CACGTG 1 cut(s) 664
PspEI GGTNACC 1 cut(s) 215
PspFI CCCAGC 1 cut(s) 476
PspGI CCWGG 4 cut(s) 163, 424, 469, 2275
PspN4I GGNNCC 9 cut(s) 403, 1146, 1162, 1690, 1851, 1961, 2314, 2405, 3015
PspPI GGNCC 4 cut(s) 402, 2404, 2439, 2887
PspPPI RGGWCCY 1 cut(s) 2404
PstI CTGCAG 1 cut(s) 529
PsuI RGATCY 7 cut(s) 135, 251, 1365, 1588, 2046, 2068, 3013
PvuI CGATCG 2 cut(s) 1721, 3055
PvuII CAGCTG 1 cut(s) 1652
RruI TCGCGA 2 cut(s) 1215, 2582
RsaI GTAC 3 cut(s) 690, 1124, 1706
RsaNI GTAC 3 cut(s) 689, 1123, 1705
RseI CAYNNNNRTG 2 cut(s) 963, 1697
SalI GTCGAC 1 cut(s) 379
SatI GCNGC 9 cut(s) 147, 542, 1551, 1650, 2238, 2428, 2431, 2514, 2815
Sau96I GGNCC 4 cut(s) 402, 2404, 2439, 2887
ScaI AGTACT 1 cut(s) 1706
SchI GAGTC 5 cut(s) 32, 1665, 2189, 2531, 2945
ScrFI CCNGG 5 cut(s) 165, 426, 471, 2277, 2571
SfaNI GCATC 6 cut(s) 339, 1478, 1689, 2014, 2141, 2931
SfcI CTRYAG 2 cut(s) 525, 3043
SfuI TTCGAA 2 cut(s) 2460, 2700
SinI GGWCC 2 cut(s) 2404, 2439
SmiMI CAYNNNNRTG 2 cut(s) 963, 1697
SmlI CTYRAG 2 cut(s) 1628, 2469
SmoI CTYRAG 2 cut(s) 1628, 2469
SphI GCATGC 1 cut(s) 2493
Sse9I AATT 5 cut(s) 702, 1424, 1801, 2462, 3089
SseBI AGGCCT 1 cut(s) 1833
SspMI CTAG 9 cut(s) 338, 369, 767, 840, 1406, 1571, 2015, 2304, 2534
StuI AGGCCT 1 cut(s) 1833
StyD4I CCNGG 5 cut(s) 163, 424, 469, 2275, 2569
StyI CCWWGG 1 cut(s) 1008
TaaI ACNGT 8 cut(s) 385, 394, 490, 516, 1741, 1918, 2716, 2863
TaiI ACGT 6 cut(s) 666, 1000, 1230, 1320, 1383, 2633
TasI AATT 5 cut(s) 702, 1424, 1801, 2462, 3089
TatI WGTACW 3 cut(s) 688, 1122, 1704
TauI GCSGC 4 cut(s) 149, 1553, 2433, 2817
TfiI GAWTC 9 cut(s) 276, 1333, 1433, 1865, 2478, 2483, 2610, 2644, 2875
TseFI GTSAC 7 cut(s) 215, 553, 566, 659, 1129, 1381, 2926
TseI GCWGC 5 cut(s) 541, 1649, 2237, 2427, 2513
Tsp45I GTSAC 7 cut(s) 215, 553, 566, 659, 1129, 1381, 2926
TspGWI ACGGA 6 cut(s) 107, 595, 633, 647, 1842, 2452
Van91I CCANNNNNTGG 1 cut(s) 2993
Vha464I CTTAAG 1 cut(s) 1628
VpaK11BI GGWCC 2 cut(s) 2404, 2439
XapI RAATTY 3 cut(s) 702, 1801, 2462
XbaI TCTAGA 2 cut(s) 766, 1405
XceI RCATGY 4 cut(s) 153, 2493, 2501, 2934
XcmI CCANNNNNNNNNTGG 2 cut(s) 227, 935
XmiI GTMKAC 1 cut(s) 380
XmnI GAANNNNTTC 2 cut(s) 451, 1776
XspI CTAG 9 cut(s) 338, 369, 767, 840, 1406, 1571, 2015, 2304, 2534
ZrmI AGTACT 1 cut(s) 1706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.