FvH4_4g04280

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0014182
Physical Location & Seq
Reverse (-)
3685498 .. 3690371
4874 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g04280.t2

Sequence Viewer

Length: 3078 bp
ATGGGCCACCATGCTCGCCGTGACTCTCTGTGCAGCTCCTTACTAGGTCCTAGGCCCGACTACCACGACTCCGACCCCGACCTCGTCTGGCCCTTCGACAAGCTCGATGGCCTAGACCGTGACGATGTCCGCGAGACTGCCTACGAGATCTTCTTCACCGCCTGCCGCTCTTCCCCGGGTTTTGGGGGACGAAACGCCCTCGTGTTTTATTCCAGCCACGAGAATGGTAGCGGGGAAGGCGGCGGGTCCGGGATGGGGATGAAGCCAACCGGGGTGGTCACAACCCCGGTAAGCCGGATAAAGAGGGCGCTTGGGCTTAAGATGCTCAAGCGCTCCCCCTCGAGGAGGATGAGTAGCGGTGGGCGTTCGAGCCCGTCCTCTCCGAACGCTGTTTCAACTATGGAAAGGTCTATGGAGAGGTCTCCTTCAACTATGGAAAGGGGTTCAGGAATGTCGTTAACAGCGCCTCCATCGAGGCCGAGGCGGCCGATGACCTCGGCCGAGATCATGAGGCAGCAGATGAGAGTCACCGAGCAGAGCGATGGCCGCCTAAGGAAAACCCTCATGAGAACCCTCGTAGGCCAAATGGGTAGGAGAGCAGAGACGATAATCCTCCCACTGGAGCTTCTCCGCCACCTAAAACCCGCCGAGTTCAACGACTCCCACGAATACCACCAGTGGCAAAAGCGGCAGCTCAAAATCCTCGAAGCCGGTCTCCTCCACTATCCCTCAATCCCACTCGATAGGTCCAACACCTTCTCCATGCGCCTCCGTGAAATCATCAGATCAGTCGACACAAAACCCATCGACACCGGCAAAAACTCCGATACAATGCGAACCCTCTGCAACTCAGTAGTCTCATTATCATGGCGGAGCTCCAACGGAACCCCTACCGACGTTTGCCACTGGGCCGATGGCTTCCCACTCAGCATCCACCTTTATGTTTCTCTTCTTCAATCGGTGTTCGACATCAGAGACGAGACTTTAGTCCTCGACGAGGTGGACGAGCTTCTCGAGCTCATGAAGAAGACTTGGTCCACTTTGGGGATCACTAGGCCGATTCATAATGTGTGTTTTACGTGGGTTTTGTTCCAACGGTATGTTTCGACTGCACAGATTGAGCCGGACTTATTGTGTGCGGCGCACGCAATGTTGGCGGAGGTGGCCAACAATGCCAAGAGGCCTGACCGTGAGGCAATATATGTCAAGATCTTGTCGGCGGTGTTGAGCTCCATGCAGGCATGGGCGGAGAAGAAGCTGCTTCGGTATCATGAGTATTTTCAGAGAGGGACAATTGGACAGATTGAAAACCTTCTCCCTCTGGCCTTGTCATCGTCAAAGATATTGGGTGAAGATGTTTCCATCACAGATGGAGCAGGAAACGGGAAAGGTGATGTTACGTTGGTGGATAACTCCGGTGATCGTGTTGAGTACTACATTCGATCTTCCCTGAAGCAAGCTTTCGAAAAGATCATGGAAGTTGGGAACGTCAACGAGGTGAAAGAGGAGGCAGTGACCGAAGCTTTACTTCAGTTGGCCCAAGACACAGAAGATTTAGCTTGTAAAGAGAGGGAGAGCTTCAGTCCCATACTCAAGAGATGGCACACAACAGCAGCAGGGATTGCAGCCGTTACATTGCACAACTGCTATGGAGCTGTGTTGAAGCAATACTTGAATGGGGTGTCCACGCTTACAGTCTTCACAGTTGAGATATTGCAGAGAGCAGGAAAGCTAGAGAAGGTTCTACTCCAAATGGTGGTGGAGGACTCTGCTGAATGCGAAGATGGGGGCAAAGCAATTGTGAGAGAGATGGTTCCATATGAAGTTGATACCATCATTGTGAACCTTTTGAAAAAATGGATTTTTGAGAGAATGAAGAAAGGGAAAGAGTGTCTCAACCGAGCGAAAGAGAGCGAGACATGGAATCCAAAGTCTAAATCAGAGCCTTATGCGCAATCAGCTGAGGAGATAATGAAATTAGCAAAGGAAATTGTGGACGAGTTCTTTGAAATCCCAATTGGAATTACAGAAGATTTAGTTCAAGATCTTGCTGATGGCATGGAACTTCTCTTCAAGGAGTACACTGCTTTTGTTGCTTCTTGTGGTTCCAAACAGAGTTATATTCCTACACTTCCTCCTTTGACAAGATGCAACCGAGACTCGAAGATCCTCAAGTTGTGGAAAAAGGCTAGCCCTTGCAGTATTGGAGCAGAAGATTTCCACCCAAATGGAACCAATGAAGGTCATCACCCTCGGCCTTCAACAAGCCGAGGAACGCAACGCCTGTATATTCGCCTCAACACCTTGCACTATCTTCTTTCACATCTTCATTCTCTTGACAAAAATCTTTCTCTCTCCCCTCGAGTGGTTCCTTCAACACCACGCAGCCGCTATGCCAACAACCGAAGGGCCAACAATTCCTCCTACTTTGAAATCACACAAGCATCAATCCAAGCAGCATGCCAACATGTCTCAGAAGTAGCTGCATATCGCTTAATCTTCCTAGACTCCAATTCTGTCTTCTATGAAAGTCTATATGTTGGTGATGTAGCCAATGCAAGAATTAGACCTGCATTGCGAATTCTCAAGCAAAATCTTACTCTTCTAGGTGCAATTCTCACTGATAGAGCACAGGCTTTGGCAGTGAGAGAAGTAATGAGGTCATCTTTTGAGGCATTCCTTATGGTTTTGGTTGCTGGGGGAAGCTCCCGTGTGTTTTATCGGAGTGATCATGAGATGATCGAGGAGGATTTTGATAGCTTAAAACGCGTATTTTGCTCTCATGGAGAAGGATTAATAGCCAAGGATGTGGTGGAACATGAAGCTGAGACAGCGGAAGGGGTGATCGATTTGATGGGACAATGTACTGAACAACTTATGGAAGATTTTAGCATTGTAACATGTGAAACAAGTGGGATAGGAGTTGTTGGTTCAGGACAAAGGCTGCCAATGCCTCCAACAACAGGAAGGTGGAATAGATCAGATCCAAACACTATATTGAGGGTCTTGTGTCACAGGAATGACAAAGCAGCAAACCAATTCTTAAAGAGAACATTCCAGCTAGCAAAGAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1026

Amino Acids

114.94

Weight (kDa)

7.99

Isoelectric Point (pI)

49.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 418 - 830 3.7e-185 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04470 AT2G33420
fragaria_vesca FvH4_4g04280 FvH4_4g04280
malus_domestica MD13G1219000.v1.1 MD16G1224300.v1.1
prunus_persica Prupe.1G045700_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0394731
rosa_laevigata RLG00000009667
rosa_multiflora Rmu_sc0005356.1_g000011
rosa_roxburghii Rroxscaffold_5G00339750
rosa_rugosa Rorug03G0362100.1
rosa_samantha Rh4AG054800 Rh4BG052500 Rh4CG059300 Rh4DG051100
rosa_wichuraiana Rw4G004370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 340
Acc16I TGCGCA 1 cut(s) 1953
Acc36I ACCTGC 1 cut(s) 2578
AccB7I CCANNNNNTGG 1 cut(s) 1756
AccBSI CCGCTC 1 cut(s) 168
AccI GTMKAC 1 cut(s) 792
AccII CGCG 2 cut(s) 132, 2769
AclWI GGATC 3 cut(s) 1055, 2161, 2978
AcoI YGGCCR 4 cut(s) 485, 498, 544, 1164
AcsI RAATTY 1 cut(s) 2580
AcuI CTGAAG 3 cut(s) 1472, 1514, 1564
AfaI GTAC 3 cut(s) 1433, 2081, 2866
AfeI AGCGCT 1 cut(s) 332
AflII CTTAAG 1 cut(s) 317
AflIII ACRYGT 3 cut(s) 2467, 2767, 2900
AjuI GAANNNNNNNTTGG 4 cut(s) 2001, 2033, 2504, 2536
Alw21I GWGCWC 4 cut(s) 878, 1020, 1232, 2632
AlwI GGATC 3 cut(s) 1055, 2161, 2978
Ama87I CYCGRG 4 cut(s) 175, 340, 1013, 2361
Aor51HI AGCGCT 1 cut(s) 332
ApoI RAATTY 1 cut(s) 2580
ArsI GACNNNNNNTTYG 2 cut(s) 1988, 2020
AseI ATTAAT 1 cut(s) 2795
Asp700I GAANNNNTTC 1 cut(s) 1311
AspA2I CCTAGG 1 cut(s) 50
AspLEI GCGC 6 cut(s) 310, 333, 466, 768, 1144, 1954
AsuC2I CCSGG 5 cut(s) 176, 177, 250, 271, 287
AsuHPI GGTGA 9 cut(s) 148, 520, 1361, 1403, 1430, 1510, 2240, 2555, 2854
AsuII TTCGAA 1 cut(s) 1464
AsuNHI GCTAGC 2 cut(s) 2189, 3061
AvaI CYCGRG 4 cut(s) 175, 340, 1013, 2361
AvaII GGWCC 4 cut(s) 47, 246, 747, 1035
AvrII CCTAGG 1 cut(s) 50
AxyI CCTNAGG 1 cut(s) 551
BalI TGGCCA 1 cut(s) 1166
BanII GRGCYC 4 cut(s) 374, 878, 1020, 1232
BauI CACGAG 2 cut(s) 200, 218
BbsI GAAGAC 3 cut(s) 1034, 1690, 2512
Bbv12I GWGCWC 4 cut(s) 878, 1020, 1232, 2632
BbvCI CCTCAGC 1 cut(s) 1962
BceAI ACGGC 2 cut(s) 3, 1613
BcgI CGANNNNNNTGC 2 cut(s) 825, 859
BclI TGATCA 1 cut(s) 2728
BcnI CCSGG 5 cut(s) 176, 177, 250, 271, 287
BfaI CTAG 9 cut(s) 44, 51, 113, 1053, 1733, 2190, 2504, 2606, 3062
BfoI RGCGCY 3 cut(s) 311, 334, 467
BfrI CTTAAG 1 cut(s) 317
BfuAI ACCTGC 1 cut(s) 2578
BglI GCCNNNNNGGC 1 cut(s) 484
BglII AGATCT 3 cut(s) 147, 1209, 2044
BlnI CCTAGG 1 cut(s) 50
BmcAI AGTACT 1 cut(s) 1433
Bme1390I CCNGG 5 cut(s) 176, 177, 250, 271, 287
Bme18I GGWCC 4 cut(s) 47, 246, 747, 1035
BmeT110I CYCGRG 4 cut(s) 175, 340, 1013, 2361
BmiI GGNNCC 6 cut(s) 247, 886, 1815, 2107, 2233, 2370
BmrFI CCNGG 5 cut(s) 176, 177, 250, 271, 287
BmrI ACTGGG 1 cut(s) 916
BmsI GCATC 4 cut(s) 312, 939, 2138, 2453
BmtI GCTAGC 2 cut(s) 2193, 3065
BmuI ACTGGG 1 cut(s) 916
BoxI GACNNNNGTC 1 cut(s) 986
BpiI GAAGAC 3 cut(s) 1034, 1690, 2512
BpmI CTGGAG 1 cut(s) 641
Bpu10I CCTNAGC 1 cut(s) 1962
Bpu14I TTCGAA 1 cut(s) 1464
BpuEI CTTGAG 4 cut(s) 311, 1577, 2156, 2570
BpuMI CCSGG 5 cut(s) 176, 177, 250, 271, 287
Bsa29I ATCGAT 1 cut(s) 2847
BsaAI YACGTR 1 cut(s) 1080
BsaI GGTCTC 2 cut(s) 426, 719
BsaWI WCCGGW 1 cut(s) 1415
Bse118I RCCGGY 2 cut(s) 710, 812
Bse1I ACTGG 3 cut(s) 624, 676, 911
Bse21I CCTNAGG 1 cut(s) 551
Bse3DI GCAATG 3 cut(s) 1155, 1634, 2573
BseCI ATCGAT 1 cut(s) 2847
BseGI GGATG 5 cut(s) 258, 264, 354, 930, 2812
BseMI GCAATG 3 cut(s) 1155, 1634, 2573
BseMII CTCAG 5 cut(s) 864, 940, 1953, 2487, 2817
BseNI ACTGG 3 cut(s) 624, 676, 911
BseRI GAGGAG 5 cut(s) 358, 707, 1520, 1979, 2759
BseX3I CGGCCG 2 cut(s) 485, 498
BseYI CCCAGC 1 cut(s) 2696
BsgI GTGCAG 2 cut(s) 52, 1095
Bsh1236I CGCG 2 cut(s) 132, 2769
Bsh1285I CGRYCG 2 cut(s) 488, 501
BshVI ATCGAT 1 cut(s) 2847
BsiEI CGRYCG 2 cut(s) 488, 501
BsiHKAI GWGCWC 4 cut(s) 878, 1020, 1232, 2632
BsiHKCI CYCGRG 4 cut(s) 175, 340, 1013, 2361
BsiSI CCGG 9 cut(s) 176, 249, 270, 287, 295, 711, 813, 1124, 1416
BslFI GGGAC 4 cut(s) 201, 1303, 1569, 2871
BsmBI CGTCTC 2 cut(s) 596, 969
BsmFI GGGAC 4 cut(s) 201, 1303, 1569, 2871
BsmI GAATGC 2 cut(s) 1781, 2675
Bso31I GGTCTC 2 cut(s) 426, 719
BsoBI CYCGRG 4 cut(s) 175, 340, 1013, 2361
Bsp119I TTCGAA 1 cut(s) 1464
Bsp1286I GDGCHC 5 cut(s) 374, 878, 1020, 1232, 2632
BspCNI CTCAG 5 cut(s) 863, 939, 1954, 2486, 2818
BspDI ATCGAT 1 cut(s) 2847
BspFNI CGCG 2 cut(s) 132, 2769
BspHI TCATGA 5 cut(s) 507, 564, 1020, 1270, 2731
BspLI GGNNCC 6 cut(s) 247, 886, 1815, 2107, 2233, 2370
BspMI ACCTGC 1 cut(s) 2578
BspOI GCTAGC 2 cut(s) 2193, 3065
BspPI GGATC 3 cut(s) 1055, 2161, 2978
BspQI GCTCTTC 1 cut(s) 175
BspT104I TTCGAA 1 cut(s) 1464
BspTI CTTAAG 1 cut(s) 317
BspTNI GGTCTC 2 cut(s) 426, 719
BsrBI CCGCTC 1 cut(s) 168
BsrDI GCAATG 3 cut(s) 1155, 1634, 2573
BsrFI RCCGGY 2 cut(s) 710, 812
BsrI ACTGG 3 cut(s) 624, 676, 911
BssAI RCCGGY 2 cut(s) 710, 812
BssSI CACGAG 2 cut(s) 200, 218
BssT1I CCWWGG 2 cut(s) 50, 2802
Bst2BI CACGAG 2 cut(s) 200, 218
Bst4CI ACNGT 5 cut(s) 119, 1098, 1190, 1696, 1705
Bst6I CTCTTC 4 cut(s) 175, 954, 2075, 2607
BstAFI CTTAAG 1 cut(s) 317
BstAPI GCANNNNNTGC 1 cut(s) 1622
BstBAI YACGTR 1 cut(s) 1080
BstBI TTCGAA 1 cut(s) 1464
BstC8I GCNNGC 8 cut(s) 16, 163, 1146, 1239, 1458, 2191, 2461, 3063
BstDEI CTNAG 6 cut(s) 551, 850, 926, 1962, 2473, 2826
BstENI CCTNNNNNAGG 2 cut(s) 343, 995
BstF5I GGATG 5 cut(s) 258, 264, 354, 930, 2812
BstFNI CGCG 2 cut(s) 132, 2769
BstH2I RGCGCY 3 cut(s) 311, 334, 467
BstHHI GCGC 6 cut(s) 310, 333, 466, 768, 1144, 1954
BstMCI CGRYCG 2 cut(s) 488, 501
BstNSI RCATGY 3 cut(s) 2463, 2471, 2904
BstPAI GACNNNNGTC 1 cut(s) 986
BstSCI CCNGG 5 cut(s) 174, 175, 248, 269, 285
BstUI CGCG 2 cut(s) 132, 2769
BstV2I GAAGAC 3 cut(s) 1034, 1690, 2512
BstX2I RGATCY 5 cut(s) 147, 1209, 2044, 2166, 2983
BstXI CCANNNNNNTGG 3 cut(s) 224, 2228, 2809
BstYI RGATCY 5 cut(s) 147, 1209, 2044, 2166, 2983
BstZI CGGCCG 2 cut(s) 485, 498
Bsu15I ATCGAT 1 cut(s) 2847
Bsu36I CCTNAGG 1 cut(s) 551
BsuTUI ATCGAT 1 cut(s) 2847
BtgZI GCGATG 1 cut(s) 555
BtsCI GGATG 5 cut(s) 258, 264, 354, 930, 2812
BtsI GCAGTG 3 cut(s) 1518, 2082, 2649
BtsIMutI CAGTG 7 cut(s) 617, 683, 904, 1518, 2082, 2619, 2649
BveI ACCTGC 1 cut(s) 2578
Cac8I GCNNGC 8 cut(s) 16, 163, 1146, 1239, 1458, 2191, 2461, 3063
CciI TCATGA 5 cut(s) 507, 564, 1020, 1270, 2731
CfoI GCGC 6 cut(s) 310, 333, 466, 768, 1144, 1954
Cfr10I RCCGGY 2 cut(s) 710, 812
Cfr9I CCCGGG 1 cut(s) 175
ClaI ATCGAT 1 cut(s) 2847
Csp6I GTAC 3 cut(s) 1432, 2080, 2865
CspCI CAANNNNNGTGG 2 cut(s) 255, 290
CviQI GTAC 3 cut(s) 1432, 2080, 2865
DdeI CTNAG 6 cut(s) 551, 850, 926, 1962, 2473, 2826
EaeI YGGCCR 4 cut(s) 485, 498, 544, 1164
EagI CGGCCG 2 cut(s) 485, 498
Eam1104I CTCTTC 4 cut(s) 175, 954, 2075, 2607
EarI CTCTTC 4 cut(s) 175, 954, 2075, 2607
EciI GGCGGA 4 cut(s) 620, 886, 1172, 1262
Ecl136II GAGCTC 3 cut(s) 876, 1018, 1230
EclXI CGGCCG 2 cut(s) 485, 498
Eco130I CCWWGG 2 cut(s) 50, 2802
Eco147I AGGCCT 1 cut(s) 1183
Eco24I GRGCYC 4 cut(s) 374, 878, 1020, 1232
Eco31I GGTCTC 2 cut(s) 426, 719
Eco47I GGWCC 4 cut(s) 47, 246, 747, 1035
Eco47III AGCGCT 1 cut(s) 332
Eco52I CGGCCG 2 cut(s) 485, 498
Eco53kI GAGCTC 3 cut(s) 876, 1018, 1230
Eco57I CTGAAG 3 cut(s) 1472, 1514, 1564
Eco81I CCTNAGG 1 cut(s) 551
Eco88I CYCGRG 4 cut(s) 175, 340, 1013, 2361
EcoICRI GAGCTC 3 cut(s) 876, 1018, 1230
EcoNI CCTNNNNNAGG 2 cut(s) 343, 995
EcoO109I RGGNCCY 1 cut(s) 47
EcoRI GAATTC 1 cut(s) 2580
EcoT14I CCWWGG 2 cut(s) 50, 2802
EcoT38I GRGCYC 4 cut(s) 374, 878, 1020, 1232
ErhI CCWWGG 2 cut(s) 50, 2802
Esp3I CGTCTC 2 cut(s) 596, 969
FalI AAGNNNNNCTT 4 cut(s) 1512, 1544, 1655, 1687
FaqI GGGAC 4 cut(s) 201, 1303, 1569, 2871
FauI CCCGC 3 cut(s) 224, 236, 652
FauNDI CATATG 1 cut(s) 1819
FbaI TGATCA 1 cut(s) 2728
FblI GTMKAC 1 cut(s) 792
FokI GGATG 5 cut(s) 265, 271, 361, 917, 2819
FriOI GRGCYC 4 cut(s) 374, 878, 1020, 1232
FspBI CTAG 9 cut(s) 44, 51, 113, 1053, 1733, 2190, 2504, 2606, 3062
FspI TGCGCA 1 cut(s) 1953
GlaI GCGC 6 cut(s) 309, 332, 465, 767, 1143, 1953
GsaI CCCAGC 1 cut(s) 2700
GsuI CTGGAG 1 cut(s) 641
HaeII RGCGCY 3 cut(s) 311, 334, 467
HapII CCGG 9 cut(s) 176, 249, 270, 287, 295, 711, 813, 1124, 1416
HhaI GCGC 6 cut(s) 310, 333, 466, 768, 1144, 1954
Hin6I GCGC 6 cut(s) 308, 331, 464, 766, 1142, 1952
HinP1I GCGC 6 cut(s) 308, 331, 464, 766, 1142, 1952
HincII GTYRAC 3 cut(s) 459, 793, 1492
HindII GTYRAC 3 cut(s) 459, 793, 1492
HindIII AAGCTT 2 cut(s) 1458, 1521
HinfI GANTC 9 cut(s) 23, 68, 525, 659, 1060, 1766, 1924, 2159, 2507
HpaI GTTAAC 1 cut(s) 459
HpaII CCGG 9 cut(s) 176, 249, 270, 287, 295, 711, 813, 1124, 1416
HphI GGTGA 9 cut(s) 148, 520, 1361, 1403, 1430, 1510, 2240, 2555, 2854
Hpy166II GTNNAC 9 cut(s) 459, 793, 1003, 1038, 1492, 1686, 1843, 1996, 2082
Hpy8I GTNNAC 9 cut(s) 459, 793, 1003, 1038, 1492, 1686, 1843, 1996, 2082
Hpy99I CGWCG 2 cut(s) 899, 998
HpyCH4III ACNGT 5 cut(s) 119, 1098, 1190, 1696, 1705
HpyCH4IV ACGT 4 cut(s) 897, 1079, 1400, 1488
HpyF3I CTNAG 6 cut(s) 551, 850, 926, 1962, 2473, 2826
HpySE526I ACGT 4 cut(s) 897, 1079, 1400, 1488
HspAI GCGC 6 cut(s) 308, 331, 464, 766, 1142, 1952
Ksp22I TGATCA 1 cut(s) 2728
KspAI GTTAAC 1 cut(s) 459
LguI GCTCTTC 1 cut(s) 175
LweI GCATC 4 cut(s) 312, 939, 2138, 2453
MaeI CTAG 9 cut(s) 44, 51, 113, 1053, 1733, 2190, 2504, 2606, 3062
MaeII ACGT 4 cut(s) 897, 1079, 1400, 1488
MaeIII GTNAC 9 cut(s) 20, 119, 277, 526, 1396, 1513, 1630, 2896, 3011
MbiI CCGCTC 1 cut(s) 168
MfeI CAATTG 3 cut(s) 1293, 1797, 2016
MflI RGATCY 5 cut(s) 147, 1209, 2044, 2166, 2983
MhlI GDGCHC 5 cut(s) 374, 878, 1020, 1232, 2632
MlsI TGGCCA 1 cut(s) 1166
MluI ACGCGT 1 cut(s) 2767
MluNI TGGCCA 1 cut(s) 1166
MlyI GAGTC 7 cut(s) 17, 62, 534, 653, 1760, 2153, 2501
MmeI TCCRAC 5 cut(s) 96, 774, 903, 1117, 2981
Mox20I TGGCCA 1 cut(s) 1166
MroXI GAANNNNTTC 1 cut(s) 1311
MscI TGGCCA 1 cut(s) 1166
MseI TTAA 6 cut(s) 318, 458, 2495, 2762, 2795, 3044
MslI CAYNNNNRTG 6 cut(s) 222, 865, 939, 1838, 2226, 3018
Msp20I TGGCCA 1 cut(s) 1166
MspA1I CMGCKG 2 cut(s) 1961, 2834
MspCI CTTAAG 1 cut(s) 317
MspI CCGG 9 cut(s) 176, 249, 270, 287, 295, 711, 813, 1124, 1416
MspR9I CCNGG 5 cut(s) 176, 177, 250, 271, 287
MunI CAATTG 3 cut(s) 1293, 1797, 2016
Mva1269I GAATGC 2 cut(s) 1781, 2675
MvnI CGCG 2 cut(s) 132, 2769
NciI CCSGG 5 cut(s) 176, 177, 250, 271, 287
NdeI CATATG 1 cut(s) 1819
NheI GCTAGC 2 cut(s) 2189, 3061
NlaIV GGNNCC 6 cut(s) 247, 886, 1815, 2107, 2233, 2370
NmeAIII GCCGAG 6 cut(s) 476, 504, 526, 673, 2233, 2294
NmuCI GTSAC 6 cut(s) 20, 119, 277, 526, 1513, 3011
NsbI TGCGCA 1 cut(s) 1953
NspI RCATGY 3 cut(s) 2463, 2471, 2904
NspV TTCGAA 1 cut(s) 1464
PaeI GCATGC 1 cut(s) 2463
PaeR7I CTCGAG 3 cut(s) 340, 1013, 2361
PagI TCATGA 5 cut(s) 507, 564, 1020, 1270, 2731
PceI AGGCCT 1 cut(s) 1183
PciI ACATGT 2 cut(s) 2467, 2900
PciSI GCTCTTC 1 cut(s) 175
PcsI WCGNNNNNNNCGW 5 cut(s) 102, 129, 663, 1002, 1011
PctI GAATGC 2 cut(s) 1781, 2675
PdmI GAANNNNTTC 1 cut(s) 1311
PfeI GAWTC 2 cut(s) 1060, 1924
PflFI GACNNNGTC 3 cut(s) 83, 125, 1033
PflMI CCANNNNNTGG 1 cut(s) 1756
PfoI TCCNGGA 1 cut(s) 248
PleI GAGTC 7 cut(s) 17, 62, 533, 653, 1760, 2153, 2501
PpsI GAGTC 7 cut(s) 17, 62, 533, 653, 1760, 2153, 2501
Ppu21I YACGTR 1 cut(s) 1080
PpuMI RGGWCCY 1 cut(s) 47
PscI ACATGT 2 cut(s) 2467, 2900
PshAI GACNNNNGTC 1 cut(s) 986
PshBI ATTAAT 1 cut(s) 2795
Psp124BI GAGCTC 3 cut(s) 878, 1020, 1232
Psp5II RGGWCCY 1 cut(s) 47
PspFI CCCAGC 1 cut(s) 2696
PspN4I GGNNCC 6 cut(s) 247, 886, 1815, 2107, 2233, 2370
PspPPI RGGWCCY 1 cut(s) 47
PspXI VCTCGAGB 2 cut(s) 340, 2361
PsuI RGATCY 5 cut(s) 147, 1209, 2044, 2166, 2983
PsyI GACNNNGTC 3 cut(s) 83, 125, 1033
PvuII CAGCTG 1 cut(s) 1961
RsaI GTAC 3 cut(s) 1433, 2081, 2866
RsaNI GTAC 3 cut(s) 1432, 2080, 2865
RseI CAYNNNNRTG 6 cut(s) 222, 865, 939, 1838, 2226, 3018
SacI GAGCTC 3 cut(s) 878, 1020, 1232
SalI GTCGAC 1 cut(s) 791
SapI GCTCTTC 1 cut(s) 175
SaqAI TTAA 6 cut(s) 318, 458, 2495, 2762, 2795, 3044
ScaI AGTACT 1 cut(s) 1433
SchI GAGTC 7 cut(s) 17, 62, 534, 653, 1760, 2153, 2501
ScrFI CCNGG 5 cut(s) 176, 177, 250, 271, 287
SduI GDGCHC 5 cut(s) 374, 878, 1020, 1232, 2632
SfaNI GCATC 4 cut(s) 312, 939, 2138, 2453
SfiI GGCCNNNNNGGCC 1 cut(s) 484
Sfr274I CTCGAG 3 cut(s) 340, 1013, 2361
SfuI TTCGAA 1 cut(s) 1464
SinI GGWCC 4 cut(s) 47, 246, 747, 1035
SlaI CTCGAG 3 cut(s) 340, 1013, 2361
SmaI CCCGGG 1 cut(s) 177
SmiMI CAYNNNNRTG 6 cut(s) 222, 865, 939, 1838, 2226, 3018
SmlI CTYRAG 8 cut(s) 317, 326, 340, 1013, 1592, 2171, 2361, 2585
SmoI CTYRAG 8 cut(s) 317, 326, 340, 1013, 1592, 2171, 2361, 2585
SphI GCATGC 1 cut(s) 2463
SseBI AGGCCT 1 cut(s) 1183
SspMI CTAG 9 cut(s) 44, 51, 113, 1053, 1733, 2190, 2504, 2606, 3062
SstI GAGCTC 3 cut(s) 878, 1020, 1232
StuI AGGCCT 1 cut(s) 1183
StyD4I CCNGG 5 cut(s) 174, 175, 248, 269, 285
StyI CCWWGG 2 cut(s) 50, 2802
TaaI ACNGT 5 cut(s) 119, 1098, 1190, 1696, 1705
TaiI ACGT 4 cut(s) 900, 1082, 1403, 1491
TaqII GACCGA 1 cut(s) 1532
TatI WGTACW 3 cut(s) 1431, 2079, 2864
TauI GCSGC 7 cut(s) 168, 243, 487, 549, 691, 1142, 2391
TfiI GAWTC 2 cut(s) 1060, 1924
Tru1I TTAA 6 cut(s) 318, 458, 2495, 2762, 2795, 3044
Tru9I TTAA 6 cut(s) 318, 458, 2495, 2762, 2795, 3044
TscAI CASTG 7 cut(s) 624, 683, 911, 1518, 2089, 2626, 2649
TseFI GTSAC 6 cut(s) 20, 119, 277, 526, 1513, 3011
Tsp45I GTSAC 6 cut(s) 20, 119, 277, 526, 1513, 3011
TspGWI ACGGA 2 cut(s) 761, 897
TspMI CCCGGG 1 cut(s) 175
TspRI CASTG 7 cut(s) 624, 683, 911, 1518, 2089, 2626, 2649
Tth111I GACNNNGTC 3 cut(s) 83, 125, 1033
Van91I CCANNNNNTGG 1 cut(s) 1756
Vha464I CTTAAG 1 cut(s) 317
VpaK11BI GGWCC 4 cut(s) 47, 246, 747, 1035
VspI ATTAAT 1 cut(s) 2795
XagI CCTNNNNNAGG 2 cut(s) 343, 995
XapI RAATTY 1 cut(s) 2580
XceI RCATGY 3 cut(s) 2463, 2471, 2904
XcmI CCANNNNNNNNNTGG 2 cut(s) 911, 2809
XhoI CTCGAG 3 cut(s) 340, 1013, 2361
XmaI CCCGGG 1 cut(s) 175
XmaJI CCTAGG 1 cut(s) 50
XmiI GTMKAC 1 cut(s) 792
XmnI GAANNNNTTC 1 cut(s) 1311
XspI CTAG 9 cut(s) 44, 51, 113, 1053, 1733, 2190, 2504, 2606, 3062
ZrmI AGTACT 1 cut(s) 1433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.