AT2G33420

Munc13 homology 1 (InterPro IPR014770), Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0014182
Physical Location & Seq
Forward (+)
14158671 .. 14162618
3948 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G33420.1

Sequence Viewer

Length: 3120 bp
ATGACCCATCATCACCGGAGAGAGTCCTTCTCGGTTACTCCCTCTACCATGGGAGGTTCCGTCGTGCTTTGTCCTAATACCGACCTTCTTTGGCCATTTGGGAAGCTTGAAGGGCTTGATCGAGATGATATTCGTGAGACGGCTTATGAAATCTTCTTCACGGCTTGCCGGTCTTCACCGGGTTTTGGTGGTAGGACTGCTCTCACGTTTTACTCTAACCACAATAGCAATGACCATCATGGAGACGGAGGAGGAGGAATAGGATCTGGTGGCTCAACTGGTGTTGGGTCTGGGTTTGGCTCTTCTGGGAGGAAAGAGGTGGTGACGACCCCTACAAGCCGGGTGAAACGGGCTTTAGGTTTGAAGATGCTTAAACGGTCTCCGTCTAGGCGAATGTCCACGATAGGAGCGGCTGGAGGAGCCGCAACTTCACTATCCCCTGGCGGAATGAATAGTAGTGCGGGACATATTAGTCCTGGAGCCGGATTCTTGACGGTCCAACCTTCTCGTCCTAGAAGACCGTTGACATCGGCAGAGATCATGAGGCAACAAATGAAGGTGACAGAACAGAGTGACAGTCGGCTTCGGAAAACCCTTTTGAGAACGCTTGTTGGTCAAACGGGTAGACGAGCGGAGACGATAATCTTACCGTTAGAGCTCCTTCGACACTTAAAAACATCGGAGTTTGGTGACATACACGAGTACCAGCTTTGGCAAAGAAGGCAACTCAAAGTTCTTGAAGCTGGTCTTCTTCTTCATCCATCGATTCCTCTAGACAAAACCAACAACTTTGCAATGCGTCTAAGAGAAGTTGTCAGACAAAGCGAGACAAAACCCATTGACACAAGCAAAACCTCAGACACGATGAGAACACTCACCAACGTGGTCGTGTCTTTATCTTGGCGTGGCACTAATGGAAACCCAACTGATGTTTGTCACTGGGCTGACGGTTACCCGCTCAACATTCATCTTTATGTTGCTTTGTTGCAGTCGATATTCGATGTGAGAGACGAGACATTGGTGCTCGATGAGATCGATGAGCTTCTAGAGCTAATGAAGAAGACTTGGTCAACACTAGGGATCACACGACCGATACATAATCTGTGTTTCACTTGGGTTTTGTTTCATCAGTACGTCGTGACATCACAAATGGAACCGGACTTGCTCGGCGCTTCTCATGCTATGTTAGCTGAAGTTGCTAATGACGCTAAGAAGCTTGACCGCGAAGCTCTTTATGTGAAACTATTAAACTCAACATTGGCCTCTATGCAAGGATGGACAGAGAAAAGGTTATTGAGCTACCATGATTATTTCCAAAGAGGGAATGTGGGATTGATAGAAAATCTTCTGCCATTGGCATTATCATCGTCAAGAATTTTGGGAGAAGATGTGACAATTTCTCAAGGGAAAGGACAAGAGAAAGGTGATGTGAAATTAGTGGATCATTCAGGAGATCGCGTCGATTATTACATAAGATCTTCCATTAAAAACGCATTTTCTAAGGTGATAGAAAATACAAAAGCTAAGATCGCAGCTACAGATGAAGGAGAAGAAGCTGCTGGAACGTTGTTACAGCTAGCTAAAGAAACAGAGGAGCTAGCATTAAGGGAACGCGAATGTTTCAGTCCGATACTCAAGAGATGGCACTCAGTTGCTGCTGGTGTTGCCTCGGTGTCACTTCACCAATGTTATGGCTCGATCTTGATGCAATATTTAGCTGGAAGATCGTTTATCTCGAGAGATACTGTTGAGGTTTTGCAAACGGCAGGGAAGCTTGAGAAGGTCTTGGTGCAGATGGTAGCTGAAGATTCAGAGGAATGCGAGGACGGTGGAAAGGGGCTTGTACGAGAGATGGTTCCTTATGAAGTCGATTCTATTATATTGCGTCTTCTAAGACAATGGGTCGAAGAAAAGCTCAAGGCAGTTCAAGAGTGTTTATTTAGAGCAAAGGAAACTGAAACGTGGAACCCGAAATCCAAATCAGAACCTTATGCACAATCCGCAGGAGAGTTGATGAAGCTAGCGAAGGACACAATCGATGAGTTCTTCGAAATCCCCATCGGGATTACTGAAGATCTTGTTCATGATATCGCTGAAGGATTGGAACAACTTTTTCAAGAATACACCACATTTGTTGCATCTTGCGGAGCAAGACAAAGTTACATCCCTACATTACCTCCTCTTACAAGATGCAACAGAGATTCCAGATTCGTTAAGCTATGGAAGAGAGCTACACCGTGTACTACTTCCAACGAAGACCTTAAATACACCACATCTGTCATATCCGACGGCCACCATCCACGGCCATCCACAAGCCGCGGGACACAACGTCTATACATTCGTCTCAACACATTACATTTCCTAAGCTCACATATCCACTCCTTAAACAAAACACTCTCTTTAAACCCGAGGATACTTCCGGCAACTCGAAAACGTTACCGCCATAGAAACAACAATTCATCTTCTTATTTCGATTTCACATACGCTGGAATCGAATCCGCTTGCCAACACGTTTCAGAGGTCGCGGCTTACCGTTTGATTTTCCTCGATTCAAACTCTGTTTTGTACGAGAGCCTCTACGTAGGAGAAGTTGCGAACGCGAGGATCAGACCAGCGTTACGAATCATGAAACAGAACTTAACATTGATGTCAGCGATTCTTGCGGATAGAGCTCAATCATTAGCAATGAGGGAGGTTATGAAATCATCATTCGAAGCGTTCTTGATGGTCCTTCTCGCCGGTGGATACTCCCGAGTGTTCTATAGATCGGATCACAGTATTATCGAAGAAGATTTCGAGAACTTGAAAAGGGTCTTTTGTACTTGTGGTGAAGGGTTGATACCTGAAGAAGTGGTGGACAGAGAGGCAGAGACAGTGGAAGGAGTGATTCAGCTTATGAGTCAACCAACAGAACAACTTATGGAAGATTTTAGTATTGTAACGTGTGAGACAAGTGGAATGGGGATGGTTGGTTCTGGACAGAAGCTACCTATGCCTCCAACTACAGGACGGTGGAACCGGTCTGATCCAAACACGATCTTGAGGGTACTTTGTCATAGAAACGACCGTGTTGCTAATCAGTTTTTAAAGAAATCGTTTCAATTGCCTAAACGAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1039

Amino Acids

116.3

Weight (kDa)

8.3

Isoelectric Point (pI)

49.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 627 - 1039 1.2e-180 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04470 AT2G33420
fragaria_vesca FvH4_4g04280 FvH4_4g04280
malus_domestica MD13G1219000.v1.1 MD16G1224300.v1.1
prunus_persica Prupe.1G045700_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0394731
rosa_laevigata RLG00000009667
rosa_multiflora Rmu_sc0005356.1_g000011
rosa_roxburghii Rroxscaffold_5G00339750
rosa_rugosa Rorug03G0362100.1
rosa_samantha Rh4AG054800 Rh4BG052500 Rh4CG059300 Rh4DG051100
rosa_wichuraiana Rw4G004370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 471
AccBSI CCGCTC 3 cut(s) 410, 632, 958
AccI GTMKAC 1 cut(s) 625
AccII CGCG 6 cut(s) 1224, 1458, 1614, 2319, 2525, 2600
AclI AACGTT 2 cut(s) 1565, 2434
AclWI GGATC 6 cut(s) 271, 1088, 1449, 2612, 2778, 3020
AcoI YGGCCR 3 cut(s) 92, 2290, 2303
AcsI RAATTY 1 cut(s) 1374
AcuI CTGAAG 5 cut(s) 1212, 1824, 2091, 2115, 2865
AfaI GTAC 7 cut(s) 704, 1133, 1845, 2242, 2567, 2821, 3048
AfiI CCNNNNNNNGG 3 cut(s) 185, 482, 3005
AflIII ACRYGT 2 cut(s) 2509, 2942
AgeI ACCGGT 1 cut(s) 3018
AgsI TTSAA 8 cut(s) 110, 364, 740, 1928, 2117, 2553, 2806, 3101
AhdI GACNNNNNGTC 2 cut(s) 1901, 2328
AjnI CCWGG 2 cut(s) 439, 475
AleI CACNNNNGTG 1 cut(s) 881
AloI GAACNNNNNNTCC 4 cut(s) 1958, 1990, 2956, 2988
Alw21I GWGCWC 3 cut(s) 660, 1026, 2674
AlwI GGATC 6 cut(s) 271, 1088, 1449, 2612, 2778, 3020
AlwNI CAGNNNCTG 1 cut(s) 1655
Ama87I CYCGRG 3 cut(s) 1735, 2407, 2751
AoxI GGCC 4 cut(s) 92, 1260, 2290, 2303
ApeKI GCWGC 3 cut(s) 1532, 1556, 1655
ApoI RAATTY 1 cut(s) 1374
AsiGI ACCGGT 1 cut(s) 3018
Asp700I GAANNNNTTC 1 cut(s) 1344
AspLEI GCGC 1 cut(s) 1172
AspS9I GGNCC 2 cut(s) 496, 2728
AsuC2I CCSGG 2 cut(s) 180, 341
AsuII TTCGAA 2 cut(s) 2049, 2712
AsuNHI GCTAGC 3 cut(s) 1576, 1597, 2020
AvaI CYCGRG 3 cut(s) 1735, 2407, 2751
AvaII GGWCC 2 cut(s) 496, 2728
BaeI ACNNNNGTAYC 2 cut(s) 686, 719
BalI TGGCCA 1 cut(s) 94
BanII GRGCYC 2 cut(s) 660, 2674
BarI GAAGNNNNNNTAC 2 cut(s) 2823, 2855
BauI CACGAG 1 cut(s) 698
BbsI GAAGAC 6 cut(s) 165, 523, 740, 1067, 1880, 2262
Bbv12I GWGCWC 3 cut(s) 660, 1026, 2674
BbvI GCAGC 3 cut(s) 1543, 1544, 1642
BceAI ACGGC 5 cut(s) 156, 177, 1779, 2305, 2318
BcgI CGANNNNNNTGC 6 cut(s) 1347, 1381, 1687, 1721, 3053, 3087
BciT130I CCWGG 2 cut(s) 441, 477
BciVI GTATCC 2 cut(s) 2406, 2738
BcnI CCSGG 2 cut(s) 180, 341
BfaI CTAG 8 cut(s) 387, 513, 773, 1046, 1076, 1577, 1598, 2021
BfmI CTRYAG 3 cut(s) 1536, 2761, 3003
BfoI RGCGCY 1 cut(s) 1173
BfuI GTATCC 2 cut(s) 2406, 2738
BglII AGATCT 2 cut(s) 1475, 2074
BisI GCNGC 7 cut(s) 411, 423, 1533, 1557, 1656, 2317, 2526
BlsI GCNGC 7 cut(s) 412, 424, 1534, 1558, 1657, 2318, 2527
Bme1390I CCNGG 4 cut(s) 180, 341, 441, 477
Bme18I GGWCC 2 cut(s) 496, 2728
BmeRI GACNNNNNGTC 2 cut(s) 1901, 2328
BmeT110I CYCGRG 3 cut(s) 1735, 2407, 2751
BmgT120I GGNCC 2 cut(s) 496, 2728
BmiI GGNNCC 7 cut(s) 58, 421, 481, 1155, 1857, 1967, 3017
BmrFI CCNGG 4 cut(s) 180, 341, 441, 477
BmrI ACTGGG 1 cut(s) 949
BmsI GCATC 4 cut(s) 357, 1695, 2147, 2180
BmtI GCTAGC 3 cut(s) 1580, 1601, 2024
BmuI ACTGGG 1 cut(s) 949
BpiI GAAGAC 6 cut(s) 165, 523, 740, 1067, 1880, 2262
BplI GAGNNNNNCTC 2 cut(s) 14, 46
BpmI CTGGAG 2 cut(s) 435, 498
Bpu10I CCTNAGC 1 cut(s) 2363
Bpu14I TTCGAA 2 cut(s) 2049, 2712
BpuEI CTTGAG 5 cut(s) 1386, 1619, 1796, 1901, 3061
BpuMI CCSGG 2 cut(s) 180, 341
Bsa29I ATCGAT 3 cut(s) 764, 1035, 2037
BsaAI YACGTR 1 cut(s) 2581
BsaI GGTCTC 1 cut(s) 384
BsaJI CCNNGG 6 cut(s) 48, 439, 1668, 2300, 2317, 2408
BsaWI WCCGGW 3 cut(s) 15, 1156, 3018
BsaXI ACNNNNNCTCC 8 cut(s) 45, 75, 1374, 1404, 1443, 1473, 2161, 2191
Bsc4I CCNNNNNNNGG 3 cut(s) 185, 482, 3005
Bse118I RCCGGY 3 cut(s) 168, 2738, 3018
Bse1I ACTGG 2 cut(s) 283, 944
Bse3DI GCAATG 3 cut(s) 235, 801, 2691
BseBI CCWGG 2 cut(s) 441, 477
BseCI ATCGAT 3 cut(s) 764, 1035, 2037
BseDI CCNNGG 6 cut(s) 48, 439, 1668, 2300, 2317, 2408
BseGI GGATG 6 cut(s) 757, 1280, 2163, 2296, 2306, 2970
BseLI CCNNNNNNNGG 3 cut(s) 185, 482, 3005
BseMI GCAATG 3 cut(s) 235, 801, 2691
BseMII CTCAG 2 cut(s) 870, 1662
BseNI ACTGG 2 cut(s) 283, 944
BseRI GAGGAG 5 cut(s) 264, 267, 432, 1607, 2169
BseXI GCAGC 3 cut(s) 1543, 1544, 1642
BsgI GTGCAG 1 cut(s) 1811
Bsh1236I CGCG 6 cut(s) 1224, 1458, 1614, 2319, 2525, 2600
Bsh1285I CGRYCG 2 cut(s) 1091, 3067
BshFI GGCC 4 cut(s) 94, 1262, 2292, 2305
BshTI ACCGGT 1 cut(s) 3018
BshVI ATCGAT 3 cut(s) 764, 1035, 2037
BsiEI CGRYCG 2 cut(s) 1091, 3067
BsiHKAI GWGCWC 3 cut(s) 660, 1026, 2674
BsiHKCI CYCGRG 3 cut(s) 1735, 2407, 2751
BsiSI CCGG 9 cut(s) 16, 169, 179, 340, 483, 1157, 2420, 2739, 3019
BslFI GGGAC 2 cut(s) 477, 2335
BslI CCNNNNNNNGG 3 cut(s) 185, 482, 3005
BsmBI CGTCTC 5 cut(s) 131, 237, 629, 1002, 2348
BsmFI GGGAC 2 cut(s) 477, 2335
BsmI GAATGC 1 cut(s) 1823
BsnI GGCC 4 cut(s) 94, 1262, 2292, 2305
Bso31I GGTCTC 1 cut(s) 384
BsoBI CYCGRG 3 cut(s) 1735, 2407, 2751
Bsp119I TTCGAA 2 cut(s) 2049, 2712
Bsp1286I GDGCHC 3 cut(s) 660, 1026, 2674
Bsp19I CCATGG 1 cut(s) 48
BspANI GGCC 4 cut(s) 94, 1262, 2292, 2305
BspCNI CTCAG 2 cut(s) 869, 1661
BspDI ATCGAT 3 cut(s) 764, 1035, 2037
BspFNI CGCG 6 cut(s) 1224, 1458, 1614, 2319, 2525, 2600
BspHI TCATGA 3 cut(s) 540, 2083, 2625
BspLI GGNNCC 7 cut(s) 58, 421, 481, 1155, 1857, 1967, 3017
BspOI GCTAGC 3 cut(s) 1580, 1601, 2024
BspPI GGATC 6 cut(s) 271, 1088, 1449, 2612, 2778, 3020
BspQI GCTCTTC 1 cut(s) 307
BspT104I TTCGAA 2 cut(s) 2049, 2712
BspTNI GGTCTC 1 cut(s) 384
BsrBI CCGCTC 3 cut(s) 410, 632, 958
BsrDI GCAATG 3 cut(s) 235, 801, 2691
BsrFI RCCGGY 3 cut(s) 168, 2738, 3018
BsrI ACTGG 2 cut(s) 283, 944
BssAI RCCGGY 3 cut(s) 168, 2738, 3018
BssECI CCNNGG 6 cut(s) 48, 439, 1668, 2300, 2317, 2408
BssSI CACGAG 1 cut(s) 698
BssT1I CCWWGG 1 cut(s) 48
Bst2BI CACGAG 1 cut(s) 698
Bst2UI CCWGG 2 cut(s) 441, 477
Bst6I CTCTTC 2 cut(s) 307, 2219
BstBAI YACGTR 1 cut(s) 2581
BstBI TTCGAA 2 cut(s) 2049, 2712
BstC8I GCNNGC 5 cut(s) 166, 1578, 1599, 2022, 2503
BstDEI CTNAG 8 cut(s) 803, 856, 1209, 1500, 1524, 1648, 1892, 2363
BstDSI CCRYGG 3 cut(s) 48, 2300, 2317
BstEII GGTNACC 1 cut(s) 950
BstF5I GGATG 6 cut(s) 757, 1280, 2163, 2296, 2306, 2970
BstFNI CGCG 6 cut(s) 1224, 1458, 1614, 2319, 2525, 2600
BstH2I RGCGCY 1 cut(s) 1173
BstHHI GCGC 1 cut(s) 1172
BstMCI CGRYCG 2 cut(s) 1091, 3067
BstNI CCWGG 2 cut(s) 441, 477
BstPI GGTNACC 1 cut(s) 950
BstSCI CCNGG 4 cut(s) 178, 339, 439, 475
BstSFI CTRYAG 3 cut(s) 1536, 2761, 3003
BstSNI TACGTA 1 cut(s) 2581
BstUI CGCG 6 cut(s) 1224, 1458, 1614, 2319, 2525, 2600
BstV1I GCAGC 3 cut(s) 1543, 1544, 1642
BstV2I GAAGAC 6 cut(s) 165, 523, 740, 1067, 1880, 2262
BstX2I RGATCY 3 cut(s) 263, 1475, 2074
BstXI CCANNNNNNTGG 1 cut(s) 1691
BstYI RGATCY 3 cut(s) 263, 1475, 2074
Bsu15I ATCGAT 3 cut(s) 764, 1035, 2037
BsuI GTATCC 2 cut(s) 2406, 2738
BsuRI GGCC 4 cut(s) 94, 1262, 2292, 2305
BsuTUI ATCGAT 3 cut(s) 764, 1035, 2037
BtgI CCRYGG 3 cut(s) 48, 2300, 2317
BtsCI GGATG 6 cut(s) 757, 1280, 2163, 2296, 2306, 2970
BtsIMutI CAGTG 2 cut(s) 937, 2880
Cac8I GCNNGC 5 cut(s) 166, 1578, 1599, 2022, 2503
CaiI CAGNNNCTG 1 cut(s) 1655
CciI TCATGA 3 cut(s) 540, 2083, 2625
CfoI GCGC 1 cut(s) 1172
Cfr10I RCCGGY 3 cut(s) 168, 2738, 3018
Cfr13I GGNCC 2 cut(s) 496, 2728
Cfr42I CCGCGG 1 cut(s) 2320
ClaI ATCGAT 3 cut(s) 764, 1035, 2037
CseI GACGC 4 cut(s) 788, 1214, 1447, 1874
Csp6I GTAC 7 cut(s) 703, 1132, 1844, 2241, 2566, 2820, 3047
CspAI ACCGGT 1 cut(s) 3018
CspCI CAANNNNNGTGG 2 cut(s) 2116, 2151
CviAII CATG 7 cut(s) 49, 239, 541, 1178, 1304, 2084, 2626
CviQI GTAC 7 cut(s) 703, 1132, 1844, 2241, 2566, 2820, 3047
DdeI CTNAG 8 cut(s) 803, 856, 1209, 1500, 1524, 1648, 1892, 2363
DraI TTTAAA 2 cut(s) 2403, 3087
DrdI GACNNNNNNGTC 1 cut(s) 471
DriI GACNNNNNGTC 2 cut(s) 1901, 2328
DseDI GACNNNNNNGTC 1 cut(s) 471
EaeI YGGCCR 3 cut(s) 92, 2290, 2303
Eam1104I CTCTTC 2 cut(s) 307, 2219
Eam1105I GACNNNNNGTC 2 cut(s) 1901, 2328
EarI CTCTTC 2 cut(s) 307, 2219
EciI GGCGGA 1 cut(s) 459
Ecl136II GAGCTC 2 cut(s) 658, 2672
Eco105I TACGTA 1 cut(s) 2581
Eco130I CCWWGG 1 cut(s) 48
Eco24I GRGCYC 2 cut(s) 660, 2674
Eco31I GGTCTC 1 cut(s) 384
Eco32I GATATC 1 cut(s) 2089
Eco47I GGWCC 2 cut(s) 496, 2728
Eco53kI GAGCTC 2 cut(s) 658, 2672
Eco57I CTGAAG 5 cut(s) 1212, 1824, 2091, 2115, 2865
Eco88I CYCGRG 3 cut(s) 1735, 2407, 2751
Eco91I GGTNACC 1 cut(s) 950
EcoICRI GAGCTC 2 cut(s) 658, 2672
EcoO65I GGTNACC 1 cut(s) 950
EcoRII CCWGG 2 cut(s) 439, 475
EcoRV GATATC 1 cut(s) 2089
EcoT14I CCWWGG 1 cut(s) 48
EcoT38I GRGCYC 2 cut(s) 660, 2674
ErhI CCWWGG 1 cut(s) 48
Esp3I CGTCTC 5 cut(s) 131, 237, 629, 1002, 2348
FaeI CATG 7 cut(s) 52, 242, 544, 1181, 1307, 2087, 2629
FalI AAGNNNNNCTT 2 cut(s) 732, 764
FaqI GGGAC 2 cut(s) 477, 2335
FatI CATG 7 cut(s) 48, 238, 540, 1177, 1303, 2083, 2625
FauI CCCGC 3 cut(s) 454, 963, 2312
FblI GTMKAC 1 cut(s) 625
Fnu4HI GCNGC 7 cut(s) 411, 423, 1533, 1557, 1656, 2317, 2526
FokI GGATG 6 cut(s) 744, 1287, 2150, 2283, 2293, 2977
FriOI GRGCYC 2 cut(s) 660, 2674
Fsp4HI GCNGC 7 cut(s) 411, 423, 1533, 1557, 1656, 2317, 2526
FspBI CTAG 8 cut(s) 387, 513, 773, 1046, 1076, 1577, 1598, 2021
GlaI GCGC 1 cut(s) 1171
GluI GCNGC 7 cut(s) 411, 423, 1533, 1557, 1656, 2317, 2526
GsuI CTGGAG 2 cut(s) 435, 498
HaeII RGCGCY 1 cut(s) 1173
HaeIII GGCC 4 cut(s) 94, 1262, 2292, 2305
HapII CCGG 9 cut(s) 16, 169, 179, 340, 483, 1157, 2420, 2739, 3019
HgaI GACGC 4 cut(s) 788, 1214, 1447, 1874
HhaI GCGC 1 cut(s) 1172
Hin1II CATG 7 cut(s) 52, 242, 544, 1181, 1307, 2087, 2629
Hin6I GCGC 1 cut(s) 1170
HinP1I GCGC 1 cut(s) 1170
HincII GTYRAC 3 cut(s) 525, 1071, 2903
HindII GTYRAC 3 cut(s) 525, 1071, 2903
HindIII AAGCTT 3 cut(s) 104, 1214, 1772
HpaII CCGG 9 cut(s) 16, 169, 179, 340, 483, 1157, 2420, 2739, 3019
Hpy166II GTNNAC 7 cut(s) 399, 525, 626, 1071, 2241, 2857, 2903
Hpy8I GTNNAC 7 cut(s) 399, 525, 626, 1071, 2241, 2857, 2903
Hpy99I CGWCG 4 cut(s) 65, 1139, 1463, 2291
HpyCH4V TGCA 9 cut(s) 794, 988, 1270, 1708, 1759, 1792, 1994, 2138, 2193
HpyF3I CTNAG 8 cut(s) 803, 856, 1209, 1500, 1524, 1648, 1892, 2363
Hsp92II CATG 7 cut(s) 52, 242, 544, 1181, 1307, 2087, 2629
HspAI GCGC 1 cut(s) 1170
KspI CCGCGG 1 cut(s) 2320
LguI GCTCTTC 1 cut(s) 307
LmnI GCTCC 6 cut(s) 407, 419, 479, 663, 1594, 2147
Lsp1109I GCAGC 3 cut(s) 1543, 1544, 1642
LweI GCATC 4 cut(s) 357, 1695, 2147, 2180
MaeI CTAG 8 cut(s) 387, 513, 773, 1046, 1076, 1577, 1598, 2021
MbiI CCGCTC 3 cut(s) 410, 632, 958
MfeI CAATTG 1 cut(s) 3101
MflI RGATCY 3 cut(s) 263, 1475, 2074
MhlI GDGCHC 3 cut(s) 660, 1026, 2674
MlsI TGGCCA 1 cut(s) 94
MluCI AATT 5 cut(s) 1374, 1395, 1433, 2455, 3101
MluNI TGGCCA 1 cut(s) 94
MlyI GAGTC 2 cut(s) 32, 2908
MmeI TCCRAC 4 cut(s) 523, 2274, 2310, 3023
Mox20I TGGCCA 1 cut(s) 94
MroXI GAANNNNTTC 1 cut(s) 1344
MscI TGGCCA 1 cut(s) 94
MslI CAYNNNNRTG 2 cut(s) 881, 972
Msp20I TGGCCA 1 cut(s) 94
MspA1I CMGCKG 1 cut(s) 2319
MspI CCGG 9 cut(s) 16, 169, 179, 340, 483, 1157, 2420, 2739, 3019
MspR9I CCNGG 4 cut(s) 180, 341, 441, 477
MunI CAATTG 1 cut(s) 3101
Mva1269I GAATGC 1 cut(s) 1823
MvaI CCWGG 2 cut(s) 441, 477
MvnI CGCG 6 cut(s) 1224, 1458, 1614, 2319, 2525, 2600
NciI CCSGG 2 cut(s) 180, 341
NcoI CCATGG 1 cut(s) 48
NheI GCTAGC 3 cut(s) 1576, 1597, 2020
NlaIII CATG 7 cut(s) 52, 242, 544, 1181, 1307, 2087, 2629
NlaIV GGNNCC 7 cut(s) 58, 421, 481, 1155, 1857, 1967, 3017
NmeAIII GCCGAG 1 cut(s) 1146
NmuCI GTSAC 8 cut(s) 322, 559, 572, 689, 935, 1138, 1390, 1674
NspV TTCGAA 2 cut(s) 2049, 2712
OliI CACNNNNGTG 1 cut(s) 881
PaeR7I CTCGAG 1 cut(s) 1735
PagI TCATGA 3 cut(s) 540, 2083, 2625
PciSI GCTCTTC 1 cut(s) 307
PcsI WCGNNNNNNNCGW 4 cut(s) 1032, 1733, 1967, 2490
PctI GAATGC 1 cut(s) 1823
PdmI GAANNNNTTC 1 cut(s) 1344
PflFI GACNNNGTC 1 cut(s) 1066
PfoI TCCNGGA 1 cut(s) 475
PinAI ACCGGT 1 cut(s) 3018
PkrI GCNGC 7 cut(s) 412, 424, 1534, 1558, 1657, 2318, 2527
PleI GAGTC 2 cut(s) 31, 2907
PpsI GAGTC 2 cut(s) 31, 2907
Ppu21I YACGTR 1 cut(s) 2581
Psp124BI GAGCTC 2 cut(s) 660, 2674
Psp1406I AACGTT 2 cut(s) 1565, 2434
Psp6I CCWGG 2 cut(s) 439, 475
PspEI GGTNACC 1 cut(s) 950
PspGI CCWGG 2 cut(s) 439, 475
PspN4I GGNNCC 7 cut(s) 58, 421, 481, 1155, 1857, 1967, 3017
PspPI GGNCC 2 cut(s) 496, 2728
PstNI CAGNNNCTG 1 cut(s) 1655
PsuI RGATCY 3 cut(s) 263, 1475, 2074
PsyI GACNNNGTC 1 cut(s) 1066
RsaI GTAC 7 cut(s) 704, 1133, 1845, 2242, 2567, 2821, 3048
RsaNI GTAC 7 cut(s) 703, 1132, 1844, 2241, 2566, 2820, 3047
RseI CAYNNNNRTG 2 cut(s) 881, 972
SacI GAGCTC 2 cut(s) 660, 2674
SacII CCGCGG 1 cut(s) 2320
SapI GCTCTTC 1 cut(s) 307
SatI GCNGC 7 cut(s) 411, 423, 1533, 1557, 1656, 2317, 2526
Sau96I GGNCC 2 cut(s) 496, 2728
SchI GAGTC 2 cut(s) 32, 2908
ScrFI CCNGG 4 cut(s) 180, 341, 441, 477
SduI GDGCHC 3 cut(s) 660, 1026, 2674
SfaNI GCATC 4 cut(s) 357, 1695, 2147, 2180
SfcI CTRYAG 3 cut(s) 1536, 2761, 3003
Sfr274I CTCGAG 1 cut(s) 1735
Sfr303I CCGCGG 1 cut(s) 2320
SfuI TTCGAA 2 cut(s) 2049, 2712
SgrAI CRCCGGYG 1 cut(s) 2738
SgrBI CCGCGG 1 cut(s) 2320
SinI GGWCC 2 cut(s) 496, 2728
SlaI CTCGAG 1 cut(s) 1735
SmiMI CAYNNNNRTG 2 cut(s) 881, 972
SmlI CTYRAG 6 cut(s) 1401, 1634, 1735, 1775, 1916, 3040
SmoI CTYRAG 6 cut(s) 1401, 1634, 1735, 1775, 1916, 3040
SnaBI TACGTA 1 cut(s) 2581
Sse9I AATT 5 cut(s) 1374, 1395, 1433, 2455, 3101
SspI AATATT 1 cut(s) 1712
SspMI CTAG 8 cut(s) 387, 513, 773, 1046, 1076, 1577, 1598, 2021
SstI GAGCTC 2 cut(s) 660, 2674
StyD4I CCNGG 4 cut(s) 178, 339, 439, 475
StyI CCWWGG 1 cut(s) 48
TaqII GACCGA 1 cut(s) 1105
TasI AATT 5 cut(s) 1374, 1395, 1433, 2455, 3101
TatI WGTACW 2 cut(s) 2240, 2819
TauI GCSGC 4 cut(s) 413, 425, 2319, 2528
TscAI CASTG 2 cut(s) 944, 2880
TseFI GTSAC 8 cut(s) 322, 559, 572, 689, 935, 1138, 1390, 1674
TseI GCWGC 3 cut(s) 1532, 1556, 1655
Tsp45I GTSAC 8 cut(s) 322, 559, 572, 689, 935, 1138, 1390, 1674
TspGWI ACGGA 3 cut(s) 49, 261, 372
TspRI CASTG 2 cut(s) 944, 2880
Tth111I GACNNNGTC 1 cut(s) 1066
VpaK11BI GGWCC 2 cut(s) 496, 2728
XapI RAATTY 1 cut(s) 1374
XbaI TCTAGA 2 cut(s) 772, 1045
XhoI CTCGAG 1 cut(s) 1735
XmiI GTMKAC 1 cut(s) 625
XmnI GAANNNNTTC 1 cut(s) 1344
XspI CTAG 8 cut(s) 387, 513, 773, 1046, 1076, 1577, 1598, 2021
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.