AT1G04570

Integral membrane transporter family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0009098
Physical Location & Seq
Reverse (-)
1246601 .. 1248876
2276 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G04570.1

Sequence Viewer

Length: 1629 bp
ATGGAAAGAATTATGATAAATCCATTGTTATCAATTCAAAACTCCCCAACCAAGTTCTTGAAACCACCACTTTCGTCCATTCACAGGCAACAACAACAACAAGAGAGGCAGAGCAATAACAATACCCTTTTCATGGGGGAAGCCAGACCAAGAAGAGCGACCACATTCGCATGTCTCTCGATAAGGAGAAGGAGAAACAACAATGGTGTGTCTGAATTTGAAGAAACGGCGAGGTTTGAACAAGTGGGTGGTAAAGGAATCTCGGTTTTGTGCGGGTTAGGTTATTGGGTACAAGGATCAAGATGTTTCCCATGGCTTGCACTTAACTTCCATATGGTTCATAGCCTCGCACTCCAACCATCGACGCTTCAGCTTGTGCAATACTCTTGCAGTCTTCCCATGGTGGCTAAACCTCTCTACGGTGTGCTCTCAGATGTTCTTTACATTGGAAGTGGTCGTAGAGTTCCTTACATCGCCATTGGAGTGTTTCTGCAGGTTTTAGCATGGGGTTCAATGGGGATATTTCAAGGAGCTAGAGAAGTTCTTCCTTCTCTTGTGGCATGTGTCCTGCTTAGTAACCTTGGAGCATCCATCACTGAGGTTGCAAAAGACGCTCTTGTTGCGGAATACGGTCTGAGATACCGAATAAACGGTCTCCAGTCTTATGCGCTCATGGCTTCAGCAGCTGGTGGAGTCCTTGGAAACTTACTTGGAGGATATCTCTTACTCACAACACCTCCTAAGATCTCCTTTCTTGTATTCTCTGCTTTGTTGTCTCTGCAGCTCGTTGTTTCTTTATCTTCCAAAGAAGAATCTTTCGGCTTACCACGGATAGCAGAGACAAGCTCGGTTTTGGAGAGCGTCAAGAAACAGATATCGAATCTTAAGGAAGCAATTCAGGCAGATGAAATCTCCCAGCCTCTGATTTGGGCAGTAGTATCCATTGCAATGGTCCCTCTTCTCTCAGGATCAGTCTTCTGTTACCAAACTCAAGTTCTGAATCTTGATCCTTCGGTTATTGGAATGTCGAAAGTGATTGGACAGTTGATGCTTCTTTGTCTAACCGTGGTCTATGATCGATACTTGAAGACACTTCCCATGAGACCACTGATCCATATCATCCAACTCTTGTACGGTTTATCGATTCTCCTCGATTACATCTTGGTGAAGCAAATAAATCTCGGATTTGGAATCTCCAACGAGGTTTATGTGCTGTGTTTTTCCAGCCTAGCAGAAATCCTAGCACAGTTTAAGATCCTTCCATTTGCAGTCAGATTAGCAAGTATGTGTCCACAGGGGTGTGAAGGATCAGTCACATCTTTTCTTGCTTCAACTCTGTGTCTATCACAAATAGTTAGTGCATTCTTAGGCGTCGGATTGGCTAATCTGATCGGTATAACATCAAGTAACTATTCAAACTTGTCTTCAGGGATTCTCATACAGTCTCTAGCAGCTCTGGCACCTTTGTGCTTCATGCACCTTGTGCCAATGTCAGAACCTGTGATTGAGAAAGAAGGCAAGAGAGGTATTAGTAAGAGAAGCAGGAGAAACAGACGAGTCGGGAGAGTAGTCGATAAAGAAAGTGTTACTTACCGACGGGAAAGAGAGTCAGAAGAAGCACAAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BT1

Protein Analysis

542

Amino Acids

59.51

Weight (kDa)

9.36

Isoelectric Point (pI)

49.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 98 - 514 2.5e-144 BT1 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 484
AccB1I GGYRCC 1 cut(s) 1459
AciI CCGC 2 cut(s) 273, 623
AclWI GGATC 6 cut(s) 304, 976, 1001, 1105, 1249, 1315
AcsI RAATTY 1 cut(s) 215
AcuI CTGAAG 3 cut(s) 353, 663, 1410
AcyI GRCGYC 1 cut(s) 1371
AdeI CACNNNGTG 1 cut(s) 1483
AfaI GTAC 2 cut(s) 291, 1133
AfiI CCNNNNNNNGG 3 cut(s) 84, 133, 419
AflII CTTAAG 1 cut(s) 884
AgsI TTSAA 9 cut(s) 38, 61, 221, 239, 513, 527, 1087, 1332, 1416
AjuI GAANNNNNNNTTGG 2 cut(s) 978, 1010
AleI CACNNNNGTG 2 cut(s) 1297, 1465
AluBI AGCT 6 cut(s) 373, 533, 686, 784, 846, 1454
AluI AGCT 6 cut(s) 373, 533, 686, 784, 846, 1454
Alw21I GWGCWC 1 cut(s) 429
Alw26I GTCTC 6 cut(s) 179, 659, 780, 833, 1096, 1449
AlwI GGATC 6 cut(s) 304, 976, 1001, 1105, 1249, 1315
AlwNI CAGNNNCTG 3 cut(s) 686, 922, 1499
ApeKI GCWGC 3 cut(s) 683, 781, 1451
ApoI RAATTY 1 cut(s) 215
ArsI GACNNNNNNTTYG 2 cut(s) 637, 669
Asp700I GAANNNNTTC 2 cut(s) 543, 894
AspLEI GCGC 1 cut(s) 670
AspS9I GGNCC 1 cut(s) 952
AsuHPI GGTGA 1 cut(s) 1177
AvaII GGWCC 1 cut(s) 952
BanI GGYRCC 1 cut(s) 1459
BbsI GAAGAC 4 cut(s) 386, 967, 1094, 1416
Bbv12I GWGCWC 1 cut(s) 429
BbvI GCAGC 3 cut(s) 695, 793, 1463
BccI CCATC 2 cut(s) 367, 599
BceAI ACGGC 1 cut(s) 243
BcgI CGANNNNNNTGC 2 cut(s) 159, 193
BciVI GTATCC 1 cut(s) 949
BcoDI GTCTC 6 cut(s) 179, 659, 780, 833, 1096, 1449
BfaI CTAG 4 cut(s) 534, 1229, 1241, 1448
BfmI CTRYAG 2 cut(s) 491, 779
BfrI CTTAAG 1 cut(s) 884
BfuAI ACCTGC 1 cut(s) 484
BfuI GTATCC 1 cut(s) 949
BglII AGATCT 1 cut(s) 744
BisI GCNGC 3 cut(s) 684, 782, 1452
BlsI GCNGC 3 cut(s) 685, 783, 1453
Bme18I GGWCC 1 cut(s) 952
BmgT120I GGNCC 1 cut(s) 952
BmiI GGNNCC 2 cut(s) 954, 1461
BmsI GCATC 2 cut(s) 596, 1038
BpiI GAAGAC 4 cut(s) 386, 967, 1094, 1416
BplI GAGNNNNNCTC 4 cut(s) 705, 737, 830, 862
BpmI CTGGAG 1 cut(s) 641
BpuEI CTTGAG 1 cut(s) 975
Bsa29I ATCGAT 2 cut(s) 1078, 1142
BsaBI GATNNNNATC 1 cut(s) 1115
BsaHI GRCGYC 1 cut(s) 1371
BsaI GGTCTC 2 cut(s) 659, 1096
BsaJI CCNNGG 6 cut(s) 311, 399, 580, 697, 827, 1065
BsaXI ACNNNNNCTCC 2 cut(s) 721, 751
Bsc4I CCNNNNNNNGG 3 cut(s) 84, 133, 419
Bse1I ACTGG 1 cut(s) 658
Bse3DI GCAATG 2 cut(s) 942, 954
Bse8I GATNNNNATC 1 cut(s) 1115
BseCI ATCGAT 2 cut(s) 1078, 1142
BseDI CCNNGG 6 cut(s) 311, 399, 580, 697, 827, 1065
BseGI GGATG 2 cut(s) 587, 1119
BseJI GATNNNNATC 1 cut(s) 1115
BseLI CCNNNNNNNGG 3 cut(s) 84, 133, 419
BseMI GCAATG 2 cut(s) 942, 954
BseMII CTCAG 4 cut(s) 444, 588, 626, 978
BseNI ACTGG 1 cut(s) 658
BseRI GAGGAG 1 cut(s) 1139
BseXI GCAGC 3 cut(s) 695, 793, 1463
BseYI CCCAGC 1 cut(s) 915
BshNI GGYRCC 1 cut(s) 1459
BshVI ATCGAT 2 cut(s) 1078, 1142
BsiHKAI GWGCWC 1 cut(s) 429
BslFI GGGAC 1 cut(s) 938
BslI CCNNNNNNNGG 3 cut(s) 84, 133, 419
BsmAI GTCTC 6 cut(s) 179, 659, 780, 833, 1096, 1449
BsmFI GGGAC 1 cut(s) 938
BsmI GAATGC 1 cut(s) 1361
Bso31I GGTCTC 2 cut(s) 659, 1096
Bsp1286I GDGCHC 1 cut(s) 429
Bsp143I GATC 9 cut(s) 296, 744, 968, 1006, 1075, 1110, 1254, 1307, 1389
Bsp19I CCATGG 2 cut(s) 311, 399
BspACI CCGC 2 cut(s) 273, 623
BspCNI CTCAG 4 cut(s) 443, 589, 627, 977
BspDI ATCGAT 2 cut(s) 1078, 1142
BspLI GGNNCC 2 cut(s) 954, 1461
BspMAI CTGCAG 2 cut(s) 495, 783
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 6 cut(s) 304, 976, 1001, 1105, 1249, 1315
BspQI GCTCTTC 1 cut(s) 148
BspT107I GGYRCC 1 cut(s) 1459
BspTI CTTAAG 1 cut(s) 884
BspTNI GGTCTC 2 cut(s) 659, 1096
BsrDI GCAATG 2 cut(s) 942, 954
BsrI ACTGG 1 cut(s) 658
BssECI CCNNGG 6 cut(s) 311, 399, 580, 697, 827, 1065
BssMI GATC 9 cut(s) 296, 744, 968, 1006, 1075, 1110, 1254, 1307, 1389
BssNI GRCGYC 1 cut(s) 1371
BssT1I CCWWGG 4 cut(s) 311, 399, 580, 697
Bst4CI ACNGT 8 cut(s) 422, 632, 653, 1044, 1066, 1136, 1248, 1443
Bst6I CTCTTC 2 cut(s) 148, 963
BstACI GRCGYC 1 cut(s) 1371
BstAFI CTTAAG 1 cut(s) 884
BstAPI GCANNNNNTGC 1 cut(s) 1483
BstC8I GCNNGC 1 cut(s) 318
BstDEI CTNAG 7 cut(s) 430, 572, 597, 635, 741, 964, 1366
BstDSI CCRYGG 4 cut(s) 311, 399, 827, 1065
BstF5I GGATG 2 cut(s) 587, 1119
BstHHI GCGC 1 cut(s) 670
BstKTI GATC 9 cut(s) 299, 747, 971, 1009, 1078, 1113, 1257, 1310, 1392
BstMAI GTCTC 6 cut(s) 179, 659, 780, 833, 1096, 1449
BstMBI GATC 9 cut(s) 296, 744, 968, 1006, 1075, 1110, 1254, 1307, 1389
BstMWI GCNNNNNNNGC 7 cut(s) 611, 620, 674, 683, 899, 1457, 1483
BstNSI RCATGY 2 cut(s) 174, 564
BstSFI CTRYAG 2 cut(s) 491, 779
BstV1I GCAGC 3 cut(s) 695, 793, 1463
BstV2I GAAGAC 4 cut(s) 386, 967, 1094, 1416
BstX2I RGATCY 2 cut(s) 744, 1254
BstXI CCANNNNNNTGG 1 cut(s) 949
BstYI RGATCY 2 cut(s) 744, 1254
Bsu15I ATCGAT 2 cut(s) 1078, 1142
BsuI GTATCC 1 cut(s) 949
BsuTUI ATCGAT 2 cut(s) 1078, 1142
BtgI CCRYGG 4 cut(s) 311, 399, 827, 1065
BtgZI GCGATG 1 cut(s) 457
BtsCI GGATG 2 cut(s) 587, 1119
BtsIMutI CAGTG 2 cut(s) 594, 1106
BveI ACCTGC 1 cut(s) 484
Cac8I GCNNGC 1 cut(s) 318
CaiI CAGNNNCTG 3 cut(s) 686, 922, 1499
CfoI GCGC 1 cut(s) 670
Cfr13I GGNCC 1 cut(s) 952
ClaI ATCGAT 2 cut(s) 1078, 1142
CseI GACGC 4 cut(s) 373, 620, 850, 1360
Csp6I GTAC 2 cut(s) 290, 1132
CviAII CATG 9 cut(s) 133, 171, 312, 400, 504, 561, 673, 1099, 1474
CviQI GTAC 2 cut(s) 290, 1132
DdeI CTNAG 7 cut(s) 430, 572, 597, 635, 741, 964, 1366
DpnI GATC 9 cut(s) 298, 746, 970, 1008, 1077, 1112, 1256, 1309, 1391
DpnII GATC 9 cut(s) 296, 744, 968, 1006, 1075, 1110, 1254, 1307, 1389
DraIII CACNNNGTG 1 cut(s) 1483
Eam1104I CTCTTC 2 cut(s) 148, 963
EarI CTCTTC 2 cut(s) 148, 963
Eco130I CCWWGG 4 cut(s) 311, 399, 580, 697
Eco31I GGTCTC 2 cut(s) 659, 1096
Eco32I GATATC 2 cut(s) 719, 876
Eco47I GGWCC 1 cut(s) 952
Eco57I CTGAAG 3 cut(s) 353, 663, 1410
EcoRV GATATC 2 cut(s) 719, 876
EcoT14I CCWWGG 4 cut(s) 311, 399, 580, 697
ErhI CCWWGG 4 cut(s) 311, 399, 580, 697
FaeI CATG 9 cut(s) 136, 174, 315, 403, 507, 564, 676, 1102, 1477
FalI AAGNNNNNCTT 6 cut(s) 600, 632, 734, 766, 1573, 1605
FaqI GGGAC 1 cut(s) 938
FatI CATG 9 cut(s) 132, 170, 311, 399, 503, 560, 672, 1098, 1473
FauI CCCGC 1 cut(s) 266
FauNDI CATATG 1 cut(s) 333
Fnu4HI GCNGC 3 cut(s) 684, 782, 1452
FokI GGATG 2 cut(s) 574, 1106
Fsp4HI GCNGC 3 cut(s) 684, 782, 1452
FspBI CTAG 4 cut(s) 534, 1229, 1241, 1448
GlaI GCGC 1 cut(s) 669
GluI GCNGC 3 cut(s) 684, 782, 1452
GsaI CCCAGC 1 cut(s) 919
GsuI CTGGAG 1 cut(s) 641
HgaI GACGC 4 cut(s) 373, 620, 850, 1360
HhaI GCGC 1 cut(s) 670
Hin1I GRCGYC 1 cut(s) 1371
Hin1II CATG 9 cut(s) 136, 174, 315, 403, 507, 564, 676, 1102, 1477
Hin6I GCGC 1 cut(s) 668
HinP1I GCGC 1 cut(s) 668
HphI GGTGA 1 cut(s) 1177
Hpy166II GTNNAC 1 cut(s) 1292
Hpy188III TCNNGA 7 cut(s) 58, 178, 300, 865, 966, 1004, 1561
Hpy8I GTNNAC 1 cut(s) 1292
Hpy99I CGWCG 3 cut(s) 367, 1376, 1599
HpyAV CCTTC 6 cut(s) 183, 558, 1020, 1268, 1298, 1508
HpyCH4III ACNGT 8 cut(s) 422, 632, 653, 1044, 1066, 1136, 1248, 1443
HpyF10VI GCNNNNNNNGC 7 cut(s) 611, 620, 674, 683, 899, 1457, 1483
HpyF3I CTNAG 7 cut(s) 430, 572, 597, 635, 741, 964, 1366
Hsp92I GRCGYC 1 cut(s) 1371
Hsp92II CATG 9 cut(s) 136, 174, 315, 403, 507, 564, 676, 1102, 1477
HspAI GCGC 1 cut(s) 668
Kzo9I GATC 9 cut(s) 296, 744, 968, 1006, 1075, 1110, 1254, 1307, 1389
LguI GCTCTTC 1 cut(s) 148
LmnI GCTCC 2 cut(s) 530, 584
Lsp1109I GCAGC 3 cut(s) 695, 793, 1463
LweI GCATC 2 cut(s) 596, 1038
MaeI CTAG 4 cut(s) 534, 1229, 1241, 1448
MaeIII GTNAC 5 cut(s) 575, 980, 1312, 1406, 1585
MalI GATC 9 cut(s) 298, 746, 970, 1008, 1077, 1112, 1256, 1309, 1391
MboI GATC 9 cut(s) 296, 744, 968, 1006, 1075, 1110, 1254, 1307, 1389
MflI RGATCY 2 cut(s) 744, 1254
MhlI GDGCHC 1 cut(s) 429
MluCI AATT 4 cut(s) 9, 33, 215, 894
MlyI GAGTC 3 cut(s) 702, 1566, 1616
MmeI TCCRAC 4 cut(s) 379, 1147, 1221, 1354
MroXI GAANNNNTTC 2 cut(s) 543, 894
MseI TTAA 3 cut(s) 324, 885, 1251
MslI CAYNNNNRTG 6 cut(s) 169, 482, 947, 1163, 1297, 1465
MspA1I CMGCKG 1 cut(s) 686
MspCI CTTAAG 1 cut(s) 884
Mva1269I GAATGC 1 cut(s) 1361
MwoI GCNNNNNNNGC 7 cut(s) 611, 620, 674, 683, 899, 1457, 1483
NcoI CCATGG 2 cut(s) 311, 399
NdeI CATATG 1 cut(s) 333
NdeII GATC 9 cut(s) 296, 744, 968, 1006, 1075, 1110, 1254, 1307, 1389
NlaIII CATG 9 cut(s) 136, 174, 315, 403, 507, 564, 676, 1102, 1477
NlaIV GGNNCC 2 cut(s) 954, 1461
NmuCI GTSAC 1 cut(s) 1312
NspI RCATGY 2 cut(s) 174, 564
OliI CACNNNNGTG 2 cut(s) 1297, 1465
PciSI GCTCTTC 1 cut(s) 148
PctI GAATGC 1 cut(s) 1361
PdmI GAANNNNTTC 2 cut(s) 543, 894
PfeI GAWTC 7 cut(s) 258, 812, 880, 1000, 1144, 1191, 1432
PkrI GCNGC 3 cut(s) 685, 783, 1453
PleI GAGTC 3 cut(s) 701, 1565, 1615
PpsI GAGTC 3 cut(s) 701, 1565, 1615
PspFI CCCAGC 1 cut(s) 915
PspN4I GGNNCC 2 cut(s) 954, 1461
PspPI GGNCC 1 cut(s) 952
PstI CTGCAG 2 cut(s) 495, 783
PstNI CAGNNNCTG 3 cut(s) 686, 922, 1499
PsuI RGATCY 2 cut(s) 744, 1254
PvuII CAGCTG 1 cut(s) 686
RsaI GTAC 2 cut(s) 291, 1133
RsaNI GTAC 2 cut(s) 290, 1132
RseI CAYNNNNRTG 6 cut(s) 169, 482, 947, 1163, 1297, 1465
SapI GCTCTTC 1 cut(s) 148
SaqAI TTAA 3 cut(s) 324, 885, 1251
SatI GCNGC 3 cut(s) 684, 782, 1452
Sau3AI GATC 9 cut(s) 296, 744, 968, 1006, 1075, 1110, 1254, 1307, 1389
Sau96I GGNCC 1 cut(s) 952
SchI GAGTC 3 cut(s) 702, 1566, 1616
SduI GDGCHC 1 cut(s) 429
SfaNI GCATC 2 cut(s) 596, 1038
SfcI CTRYAG 2 cut(s) 491, 779
SinI GGWCC 1 cut(s) 952
SmiMI CAYNNNNRTG 6 cut(s) 169, 482, 947, 1163, 1297, 1465
SmlI CTYRAG 2 cut(s) 884, 990
SmoI CTYRAG 2 cut(s) 884, 990
Sse9I AATT 4 cut(s) 9, 33, 215, 894
SsiI CCGC 2 cut(s) 273, 623
SspMI CTAG 4 cut(s) 534, 1229, 1241, 1448
StyI CCWWGG 4 cut(s) 311, 399, 580, 697
TaaI ACNGT 8 cut(s) 422, 632, 653, 1044, 1066, 1136, 1248, 1443
TaqI TCGA 8 cut(s) 179, 362, 878, 1028, 1078, 1142, 1152, 1572
TasI AATT 4 cut(s) 9, 33, 215, 894
TfiI GAWTC 7 cut(s) 258, 812, 880, 1000, 1144, 1191, 1432
Tru1I TTAA 3 cut(s) 324, 885, 1251
Tru9I TTAA 3 cut(s) 324, 885, 1251
TscAI CASTG 2 cut(s) 601, 1113
TseFI GTSAC 1 cut(s) 1312
TseI GCWGC 3 cut(s) 683, 781, 1451
Tsp45I GTSAC 1 cut(s) 1312
TspDTI ATGAA 4 cut(s) 121, 329, 921, 1462
TspGWI ACGGA 1 cut(s) 844
TspRI CASTG 2 cut(s) 601, 1113
Vha464I CTTAAG 1 cut(s) 884
VpaK11BI GGWCC 1 cut(s) 952
XapI RAATTY 1 cut(s) 215
XceI RCATGY 2 cut(s) 174, 564
XmnI GAANNNNTTC 2 cut(s) 543, 894
XspI CTAG 4 cut(s) 534, 1229, 1241, 1448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.