RLG00000009579

Folate-Biopterin Transporter

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
54876771 .. 54878974
2204 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009579

Sequence Viewer

Length: 1671 bp
ATGATTTACACATCAATTTCTTATGAGAATCCATGGGGAACTGCAATCAATCCAAAAGTGATGAAGCTTTCAAGAAAGCAACCACAACATCCTTTTCACTTAAAACCCATCATTCGTTGTCACCGCCAAAACCCAGATAACACCACCATACACAACCCCAAACAACCCAAAATCCAGCTCAAAGATCCCATCTTGGTCACCCCAACAACGACTCAAGTTGTTTACAGAAAAGCCAAGAAAAACAGGGCCAATGTGGAAAGGAGGGGCCTTCCCAAATTGGGAAGCCAACAAATGATGATTTTGTGTGGATTTGGATATTGGGTTCAAGGCTTTAGGTGCTTTCCATGGTTGGCTTTGAACTTTCACATGGCTCACAATCTTAATGTGCACCCTTCAATATTGCAACTTGTACAACATGGTGGTAATCTTCCCATGGTGGCTAAGCCCTTGTATGGACTCCTCTCTGATGCTTTTTATATTGGTGGTGCTCATAGAATTCCTTATGTTTCCATTGGAGTTCTTCTACAGGTCCTGTCTTGGGGATCACTGGCTCTGGTTCCAGTTGCAGCTAAGGCCCTTCCAACCCTTATGGCATGTGTTCTTCTCAGTAATATTGGAGCATCAATTACAGAAGTAGCAAAGGATGCTCTTGTTGCAGAATATGGCCAGCAACACAGGATGAAAGGCCTCCAGTCTTATGCATTCATGGCATTAGCTGCTGGTGGAATCCTTGGGAACTTGGTAGGTGGATATTTCTTAATGAAAGCACCACCCCGAACCATGTTTCTCCTGTTTTCGGTATTACTTTCCGCTCAACTTGCAATTTCATCGAGAATAAGAGAGGAATCTCTTGGTTTACCACAATTGTCAGACCAGAGTCTTGCAGGGAAACCAATCTTGGAAAGTCTTAGGAAACAATTGTCAGATCTAATGATGGGAATTCAAGAGCAGAGCATTGTTCATCCACTTACTTGGATTGTAGCTTCTATTGCCATGGTCCCGGTTCTGTCAGGTTCCATTTTTTGCTATCAAACACAATGTCTAAATCTTGATCCTTCGGTCATTGGCATGTCTCGAGTGATTGGTCAGTTGATGCTTCTTTCCACTACCATACTTTACGACCGTTATTGGAAACAAGTTCCAATGAGGAAGTTGGTTGGTATTGTGCAGTTTGTGTATGCCTTTTCCCTTCTTCTTGACTTTGTTTTAGTGAGACAGATCAATCTTAGGCTGGGGATTCCCAATGAGGTTTTTGTTCTTTGTTTTTCGGGATTAGCAGAAACAATTGCACAGTTCAAGCTCTTGCCTTTCTCAGTCCTGTTTGCCAATTTATGTCCTCAAGGTTGTGAAGGATCTCTCACTGCTTTCTTAGCTTCAGCCTTGATTTTTTCATCAATAGTTAGCGCGTTTTTAGGTGTTGGATTGGCTTCTCTGATTGGAGTAACAGCTGGTGACTACTCAAGCCTGCCTTTGGGCATTCTGGTACAGTTTCTTGCAGCTTTACTTCCTTTGGGATGGATTCATCATTTACCCGTGTCAGAAGCTATCGTTGGAAAGGAGAGGAAGAGAAGTTTAAGTAGGAGGAGTCAGAAAAATAGAAGGGTTGGTAGAGTGGTGTACGATACAGTATATATCTACAGACGAGAGAGAGAATCTGAAGCACAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

557

Amino Acids

61.53

Weight (kDa)

9.83

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 109 - 523 2e-115 BT1 family
MFS_1 PF07690 115 - 399 7.9e-09 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 812
AccII CGCG 1 cut(s) 1406
AciI CCGC 2 cut(s) 124, 810
AclWI GGATC 4 cut(s) 179, 550, 1046, 1360
AcoI YGGCCR 1 cut(s) 664
AcsI RAATTY 2 cut(s) 495, 939
AcuI CTGAAG 1 cut(s) 1359
AfaI GTAC 3 cut(s) 411, 1485, 1619
AfiI CCNNNNNNNGG 5 cut(s) 278, 452, 538, 796, 1471
AgsI TTSAA 6 cut(s) 72, 326, 358, 396, 944, 1297
AjuI GAANNNNNNNTTGG 4 cut(s) 881, 913, 1533, 1565
AloI GAACNNNNNNTCC 2 cut(s) 306, 338
Alw21I GWGCWC 2 cut(s) 390, 490
Alw26I GTCTC 2 cut(s) 1077, 1207
Alw44I GTGCAC 1 cut(s) 386
AlwI GGATC 4 cut(s) 179, 550, 1046, 1360
AlwNI CAGNNNCTG 1 cut(s) 532
Ama87I CYCGRG 1 cut(s) 1074
AoxI GGCC 5 cut(s) 246, 265, 573, 664, 685
ApaLI GTGCAC 1 cut(s) 386
ApeKI GCWGC 3 cut(s) 566, 716, 1496
ApoI RAATTY 2 cut(s) 495, 939
ArsI GACNNNNNNTTYG 2 cut(s) 1024, 1056
AspLEI GCGC 1 cut(s) 1406
AspS9I GGNCC 5 cut(s) 246, 265, 529, 574, 997
AsuC2I CCSGG 1 cut(s) 1001
AsuHPI GGTGA 3 cut(s) 113, 190, 1463
AvaI CYCGRG 1 cut(s) 1074
AvaII GGWCC 2 cut(s) 529, 997
BaeGI GKGCMC 1 cut(s) 390
BalI TGGCCA 1 cut(s) 666
Bbv12I GWGCWC 2 cut(s) 390, 490
BbvI GCAGC 3 cut(s) 578, 703, 1508
BccI CCATC 4 cut(s) 116, 197, 928, 1509
BcgI CGANNNNNNTGC 2 cut(s) 810, 844
BcnI CCSGG 1 cut(s) 1001
BcoDI GTCTC 2 cut(s) 1077, 1207
BfmI CTRYAG 2 cut(s) 524, 1636
BglII AGATCT 1 cut(s) 925
BisI GCNGC 3 cut(s) 567, 717, 1497
BlpI GCTNAGC 1 cut(s) 441
BlsI GCNGC 3 cut(s) 568, 718, 1498
Bme1390I CCNGG 1 cut(s) 1001
Bme18I GGWCC 2 cut(s) 529, 997
BmeT110I CYCGRG 1 cut(s) 1074
BmgT120I GGNCC 5 cut(s) 246, 265, 529, 574, 997
BmiI GGNNCC 4 cut(s) 266, 558, 999, 1015
BmrFI CCNGG 1 cut(s) 1001
BmsI GCATC 4 cut(s) 457, 629, 634, 1083
BoxI GACNNNNGTC 1 cut(s) 876
BpmI CTGGAG 1 cut(s) 674
Bpu10I CCTNAGC 1 cut(s) 570
Bpu1102I GCTNAGC 1 cut(s) 441
BpuEI CTTGAG 3 cut(s) 198, 1323, 1444
BpuMI CCSGG 1 cut(s) 1001
BsaJI CCNNGG 5 cut(s) 32, 344, 432, 730, 993
Bsc4I CCNNNNNNNGG 5 cut(s) 278, 452, 538, 796, 1471
Bse1I ACTGG 3 cut(s) 552, 560, 691
BseDI CCNNGG 5 cut(s) 32, 344, 432, 730, 993
BseGI GGATG 5 cut(s) 88, 649, 684, 961, 1520
BseLI CCNNNNNNNGG 5 cut(s) 278, 452, 538, 796, 1471
BseMII CTCAG 2 cut(s) 619, 1326
BseNI ACTGG 3 cut(s) 552, 560, 691
BseRI GAGGAG 2 cut(s) 449, 1597
BseSI GKGCMC 1 cut(s) 390
BseXI GCAGC 3 cut(s) 578, 703, 1508
BseYI CCCAGC 1 cut(s) 1231
BsgI GTGCAG 1 cut(s) 1187
Bsh1236I CGCG 1 cut(s) 1406
Bsh1285I CGRYCG 1 cut(s) 1123
BshFI GGCC 5 cut(s) 248, 267, 575, 666, 687
BsiEI CGRYCG 1 cut(s) 1123
BsiHKAI GWGCWC 2 cut(s) 390, 490
BsiHKCI CYCGRG 1 cut(s) 1074
BsiSI CCGG 1 cut(s) 1001
BslFI GGGAC 1 cut(s) 983
BslI CCNNNNNNNGG 5 cut(s) 278, 452, 538, 796, 1471
BsmAI GTCTC 2 cut(s) 1077, 1207
BsmFI GGGAC 1 cut(s) 983
BsmI GAATGC 2 cut(s) 701, 1476
BsnI GGCC 5 cut(s) 248, 267, 575, 666, 687
BsoBI CYCGRG 1 cut(s) 1074
Bsp1286I GDGCHC 2 cut(s) 390, 490
Bsp1407I TGTACA 1 cut(s) 409
Bsp143I GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
Bsp1720I GCTNAGC 1 cut(s) 441
Bsp19I CCATGG 4 cut(s) 32, 344, 432, 993
BspACI CCGC 2 cut(s) 124, 810
BspANI GGCC 5 cut(s) 248, 267, 575, 666, 687
BspCNI CTCAG 2 cut(s) 618, 1325
BspFNI CGCG 1 cut(s) 1406
BspLI GGNNCC 4 cut(s) 266, 558, 999, 1015
BspPI GGATC 4 cut(s) 179, 550, 1046, 1360
BsrBI CCGCTC 1 cut(s) 812
BsrGI TGTACA 1 cut(s) 409
BsrI ACTGG 3 cut(s) 552, 560, 691
BssECI CCNNGG 5 cut(s) 32, 344, 432, 730, 993
BssMI GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
BssT1I CCWWGG 5 cut(s) 32, 344, 432, 730, 993
Bst4CI ACNGT 4 cut(s) 1124, 1293, 1488, 1627
Bst6I CTCTTC 1 cut(s) 1559
BstAPI GCANNNNNTGC 2 cut(s) 644, 716
BstAUI TGTACA 1 cut(s) 409
BstC8I GCNNGC 2 cut(s) 668, 1466
BstDEI CTNAG 7 cut(s) 441, 570, 605, 908, 1226, 1312, 1369
BstDSI CCRYGG 4 cut(s) 32, 344, 432, 993
BstEII GGTNACC 1 cut(s) 196
BstF5I GGATG 5 cut(s) 88, 649, 684, 961, 1520
BstFNI CGCG 1 cut(s) 1406
BstHHI GCGC 1 cut(s) 1406
BstKTI GATC 6 cut(s) 187, 545, 928, 1054, 1221, 1355
BstMAI GTCTC 2 cut(s) 1077, 1207
BstMBI GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
BstMCI CGRYCG 1 cut(s) 1123
BstMWI GCNNNNNNNGC 9 cut(s) 336, 572, 644, 653, 707, 716, 818, 989, 1370
BstNSI RCATGY 2 cut(s) 597, 1072
BstPAI GACNNNNGTC 1 cut(s) 876
BstPI GGTNACC 1 cut(s) 196
BstSCI CCNGG 1 cut(s) 999
BstSFI CTRYAG 2 cut(s) 524, 1636
BstSLI GKGCMC 1 cut(s) 390
BstUI CGCG 1 cut(s) 1406
BstV1I GCAGC 3 cut(s) 578, 703, 1508
BstX2I RGATCY 3 cut(s) 184, 925, 1352
BstXI CCANNNNNNTGG 1 cut(s) 972
BstYI RGATCY 3 cut(s) 184, 925, 1352
BsuRI GGCC 5 cut(s) 248, 267, 575, 666, 687
BtgI CCRYGG 4 cut(s) 32, 344, 432, 993
BtsCI GGATG 5 cut(s) 88, 649, 684, 961, 1520
BtsI GCAGTG 1 cut(s) 1359
BtsIMutI CAGTG 2 cut(s) 545, 1359
Cac8I GCNNGC 2 cut(s) 668, 1466
CaiI CAGNNNCTG 1 cut(s) 532
CfoI GCGC 1 cut(s) 1406
Cfr13I GGNCC 5 cut(s) 246, 265, 529, 574, 997
Csp6I GTAC 3 cut(s) 410, 1484, 1618
CviQI GTAC 3 cut(s) 410, 1484, 1618
DdeI CTNAG 7 cut(s) 441, 570, 605, 908, 1226, 1312, 1369
DpnI GATC 6 cut(s) 186, 544, 927, 1053, 1220, 1354
DpnII GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
EaeI YGGCCR 1 cut(s) 664
Eam1104I CTCTTC 1 cut(s) 1559
EarI CTCTTC 1 cut(s) 1559
Eco130I CCWWGG 5 cut(s) 32, 344, 432, 730, 993
Eco147I AGGCCT 1 cut(s) 687
Eco47I GGWCC 2 cut(s) 529, 997
Eco57I CTGAAG 1 cut(s) 1359
Eco88I CYCGRG 1 cut(s) 1074
Eco91I GGTNACC 1 cut(s) 196
EcoO109I RGGNCCY 3 cut(s) 265, 529, 574
EcoO65I GGTNACC 1 cut(s) 196
EcoRI GAATTC 2 cut(s) 495, 939
EcoT14I CCWWGG 5 cut(s) 32, 344, 432, 730, 993
EcoT22I ATGCAT 1 cut(s) 703
ErhI CCWWGG 5 cut(s) 32, 344, 432, 730, 993
FalI AAGNNNNNCTT 2 cut(s) 1453, 1485
FaqI GGGAC 1 cut(s) 983
Fnu4HI GCNGC 3 cut(s) 567, 717, 1497
FokI GGATG 5 cut(s) 75, 656, 691, 948, 1527
Fsp4HI GCNGC 3 cut(s) 567, 717, 1497
GlaI GCGC 1 cut(s) 1405
GluI GCNGC 3 cut(s) 567, 717, 1497
GsaI CCCAGC 1 cut(s) 1235
GsuI CTGGAG 1 cut(s) 674
HaeIII GGCC 5 cut(s) 248, 267, 575, 666, 687
HapII CCGG 1 cut(s) 1001
HhaI GCGC 1 cut(s) 1406
Hin6I GCGC 1 cut(s) 1404
HinP1I GCGC 1 cut(s) 1404
HindIII AAGCTT 1 cut(s) 65
HpaII CCGG 1 cut(s) 1001
HphI GGTGA 3 cut(s) 113, 190, 1463
Hpy166II GTNNAC 4 cut(s) 223, 388, 857, 1618
Hpy188I TCNGA 7 cut(s) 466, 871, 925, 1434, 1540, 1590, 1657
Hpy188III TCNNGA 7 cut(s) 72, 831, 944, 1049, 1074, 1196, 1269
Hpy8I GTNNAC 4 cut(s) 223, 388, 857, 1618
HpyAV CCTTC 7 cut(s) 278, 402, 587, 1065, 1199, 1343, 1593
HpyCH4III ACNGT 4 cut(s) 1124, 1293, 1488, 1627
HpyF10VI GCNNNNNNNGC 9 cut(s) 336, 572, 644, 653, 707, 716, 818, 989, 1370
HpyF3I CTNAG 7 cut(s) 441, 570, 605, 908, 1226, 1312, 1369
HspAI GCGC 1 cut(s) 1404
Kzo9I GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
LmnI GCTCC 1 cut(s) 617
Lsp1109I GCAGC 3 cut(s) 578, 703, 1508
LweI GCATC 4 cut(s) 457, 629, 634, 1083
MaeIII GTNAC 4 cut(s) 119, 196, 1441, 1451
MalI GATC 6 cut(s) 186, 544, 927, 1053, 1220, 1354
MbiI CCGCTC 1 cut(s) 812
MboI GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
MboII GAAGA 5 cut(s) 419, 512, 593, 1184, 1576
MfeI CAATTG 3 cut(s) 863, 917, 1284
MflI RGATCY 3 cut(s) 184, 925, 1352
MhlI GDGCHC 2 cut(s) 390, 490
MlsI TGGCCA 1 cut(s) 666
MluNI TGGCCA 1 cut(s) 666
MlyI GAGTC 4 cut(s) 205, 450, 886, 1594
MmeI TCCRAC 3 cut(s) 605, 1399, 1531
MnlI CCTC 9 cut(s) 255, 470, 698, 835, 1140, 1240, 1347, 1554, 1575
Mox20I TGGCCA 1 cut(s) 666
Mph1103I ATGCAT 1 cut(s) 703
MscI TGGCCA 1 cut(s) 666
MseI TTAA 4 cut(s) 101, 381, 758, 1574
MslI CAYNNNNRTG 1 cut(s) 1067
Msp20I TGGCCA 1 cut(s) 666
MspA1I CMGCKG 1 cut(s) 1448
MspI CCGG 1 cut(s) 1001
MspR9I CCNGG 1 cut(s) 1001
MunI CAATTG 3 cut(s) 863, 917, 1284
Mva1269I GAATGC 2 cut(s) 701, 1476
MvnI CGCG 1 cut(s) 1406
MwoI GCNNNNNNNGC 9 cut(s) 336, 572, 644, 653, 707, 716, 818, 989, 1370
NciI CCSGG 1 cut(s) 1001
NcoI CCATGG 4 cut(s) 32, 344, 432, 993
NdeII GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
NlaIV GGNNCC 4 cut(s) 266, 558, 999, 1015
NmuCI GTSAC 3 cut(s) 119, 196, 1451
NsiI ATGCAT 1 cut(s) 703
NspI RCATGY 2 cut(s) 597, 1072
PaeR7I CTCGAG 1 cut(s) 1074
PceI AGGCCT 1 cut(s) 687
PctI GAATGC 2 cut(s) 701, 1476
PfeI GAWTC 6 cut(s) 28, 726, 845, 1237, 1519, 1652
PkrI GCNGC 3 cut(s) 568, 718, 1498
PleI GAGTC 4 cut(s) 205, 450, 885, 1593
PpsI GAGTC 4 cut(s) 205, 450, 885, 1593
PpuMI RGGWCCY 1 cut(s) 529
PshAI GACNNNNGTC 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 529
PspEI GGTNACC 1 cut(s) 196
PspFI CCCAGC 1 cut(s) 1231
PspN4I GGNNCC 4 cut(s) 266, 558, 999, 1015
PspPI GGNCC 5 cut(s) 246, 265, 529, 574, 997
PspPPI RGGWCCY 1 cut(s) 529
PstNI CAGNNNCTG 1 cut(s) 532
PsuI RGATCY 3 cut(s) 184, 925, 1352
PvuII CAGCTG 1 cut(s) 1448
RsaI GTAC 3 cut(s) 411, 1485, 1619
RsaNI GTAC 3 cut(s) 410, 1484, 1618
RseI CAYNNNNRTG 1 cut(s) 1067
SaqAI TTAA 4 cut(s) 101, 381, 758, 1574
SatI GCNGC 3 cut(s) 567, 717, 1497
Sau3AI GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
Sau96I GGNCC 5 cut(s) 246, 265, 529, 574, 997
SchI GAGTC 4 cut(s) 205, 450, 886, 1594
ScrFI CCNGG 1 cut(s) 1001
SduI GDGCHC 2 cut(s) 390, 490
SfaNI GCATC 4 cut(s) 457, 629, 634, 1083
SfcI CTRYAG 2 cut(s) 524, 1636
Sfr274I CTCGAG 1 cut(s) 1074
SinI GGWCC 2 cut(s) 529, 997
SlaI CTCGAG 1 cut(s) 1074
SmiMI CAYNNNNRTG 1 cut(s) 1067
SmlI CTYRAG 4 cut(s) 213, 1074, 1338, 1459
SmoI CTYRAG 4 cut(s) 213, 1074, 1338, 1459
SseBI AGGCCT 1 cut(s) 687
SsiI CCGC 2 cut(s) 124, 810
SspI AATATT 2 cut(s) 399, 613
StuI AGGCCT 1 cut(s) 687
StyD4I CCNGG 1 cut(s) 999
StyI CCWWGG 5 cut(s) 32, 344, 432, 730, 993
TaaI ACNGT 4 cut(s) 1124, 1293, 1488, 1627
TaqI TCGA 2 cut(s) 830, 1075
TaqII GACCGA 1 cut(s) 1048
TatI WGTACW 1 cut(s) 409
TfiI GAWTC 6 cut(s) 28, 726, 845, 1237, 1519, 1652
Tru1I TTAA 4 cut(s) 101, 381, 758, 1574
Tru9I TTAA 4 cut(s) 101, 381, 758, 1574
TscAI CASTG 2 cut(s) 552, 1366
TseFI GTSAC 3 cut(s) 119, 196, 1451
TseI GCWGC 3 cut(s) 566, 716, 1496
Tsp45I GTSAC 3 cut(s) 119, 196, 1451
TspDTI ATGAA 8 cut(s) 77, 694, 695, 776, 816, 950, 1380, 1511
TspRI CASTG 2 cut(s) 552, 1366
VneI GTGCAC 1 cut(s) 386
VpaK11BI GGWCC 2 cut(s) 529, 997
XapI RAATTY 2 cut(s) 495, 939
XceI RCATGY 2 cut(s) 597, 1072
XhoI CTCGAG 1 cut(s) 1074
Zsp2I ATGCAT 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.