Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009990

Physical Location & Seq

Genomic Coordinates Forward (+)

2703295 .. 2706860

Gene Structure 3566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G08540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGTCTTCTTGTCTTCTTCCTCAGTTCAAGTGCCCACCTGATTCTTTCTCTATTCACTTCCGAACCTCTTTCTGTGCCCCTAAACACAACAAGGGTTCAGTCTTCTTCCAACCGCAATGTGCAGTATCCACTTCACCGGCGTTATTAACTTCTATGCTTGATGTCGCAAAGCTTAGACTACCCTCTTTCGATACTGATTCGGATTCCCTTATATCAGACAGGCAGTGGACTTATACAAGGCCCGATGGTCCTTCCACTGAGGCGAAGTATTTAGAAGCTTTAGCCTCTGAGACACTTCTCACAAGCGATGAAGCAGTAGTTGTAGCAGCAGCAGCTGAAGCAGTCGCCCTTGCAAGAGCTGCTGTCAAAGTTGCCAAAGATGCAACATTATTTAAGAACAGTAACAACACGAACCTATTAACTTCGTCAACGGCCGACAAACGCTCCAAGTGGGACCAGTTTACTGAGAAGGAACGTGCTGGCATATTGGGGCATCTAGCGGTTTCGGACAATGGAATTGTGAGTGATAAAATCACTGCATCTGCCTCTAACAAAGAGTCTATTGGTGATTTAGAATCAGAAAAACAAGAAGAAGTTGAGCTTCTGGAGGAGCAACCTTCAGTGAGTTTAGCTGTGAGATCTACACGTCAAACTGAAAGGAAAGCTCGGAGGGCAAAAGGGTTAGAGAAAACTGCATCAGGTATTCCGTCTGTGAAGACTGGTTCGAGCCCTAAAAAGAAACGTCTTGTTGCGCAGGAAGTTGATCATAATGATCCTTTGCGTTATCTAAGAATGACAACAAGCAGTTCCAAGCTTCTCACTGTCAGAGAAGAACATGAGCTGTCGGCAGGAATACAGGACCTTCTGAAGTTAGAAAGACTTCAAACAGAGCTTACAGAGCGTAGTGGACGTCAGCCAACCTTTGCGCAGTGGGCTTCTGCTGCTGGAGTCGATCAGAAATCATTAAGGCAACGTATACATCATGGCACACTATGCAAAGACAAAATGATCAAAAGCAACATTCGACTCGTTATTTCGATTGCAAAGAATTATCAAGGAGCTGGGATGAACCTCCAAGATCTTGTCCAGGAAGGGTGCAGAGGGCTTGTGAGGGGAGCAGAGAAGTTTGATGCTACAAAGGGTTTTAAATTTTCGACTTACGCGCATTGGTGGATCAAGCAAGCTGTGCGGAAGTCTCTCTCTGATCAGTCCAGAATGATAAGATTGCCTTTTCACATGGTGGAAGCAACATATAGGGTGAAAGAGGCACGAAAGCAACTGTACAGTGAAACCGGTAAGCACCCAAAGAACGAAGAAATTGCAGAGGCAACAGGGCTGTCGATGAAGAGACTCATGGCGGTTCTACTCTCTCCTAAACCTCCGAGGTCGCTAGACCAGAAAATCGGAATGAATCAAAACCTCAAACCTTCGGAAGTGATAGCAGATCCAGAAGCAGTAACGTCAGAAGATATACTGATAAAGGAATTCATGAGGCAGGACTTGGACAAAGTGTTGGACTCGTTGGGTACAAGGGAGAAACAAGTGATACGTTGGAGATTTGGGATGGAGGATGGGAGAATGAAGACGTTGCAAGAGATAGGAGAGATGATGGGAGTGAGCAGGGAGAGAGTAAGACAGATAGAGTCATCTGCATTCAGGAAACTAAAGAACAAGAAGAGAAACAACCATTTGCAGCAATACTTGGTTGCACAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006399 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009639 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r1_2 Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

572

Amino Acids

64.05

Weight (kDa)

9.49

Isoelectric Point (pI)

47.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	336 - 405	7.2e-20	Sigma-70 region 2
Sigma70_r3	PF04539	415 - 490	1.1e-18	Sigma-70 region 3
Sigma70_r4	PF04545	504 - 556	7.8e-19	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08540
fragaria_vesca	FvH4_1g29160 FvH4_1g29160
malus_domestica	MD12G1111900.v1.1 MD14G1100900.v1.1
prunus_persica	Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1
pyrus_communis	pycom12g09170 pycom14g08810
rosa_chinensis	RchiOBHm_Chr3g0494351 RchiOBHm_Chr3g0494481
rosa_laevigata	RLG00000022672
rosa_multiflora	Rmu_sc0000152.1_g000008
rosa_roxburghii	Rroxscaffold_6G00391100
rosa_rugosa	Rorug03G0265600
rosa_samantha	Rh3BG350900 Rh3CG347600 Rh3DG350200
rosa_wichuraiana	Rw3G027560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	913
Acc16I	TGCGCA	2 cut(s)	753, 927
AccI	GTMKAC	1 cut(s)	976
AccII	CGCG	1 cut(s)	1163
AciI	CCGC	4 cut(s)	113, 500, 1189, 1358
AclWI	GGATC	3 cut(s)	767, 1181, 1439
AcoI	YGGCCR	1 cut(s)	432
AcsI	RAATTY	2 cut(s)	1148, 1484
AcuI	CTGAAG	3 cut(s)	357, 603, 887
AcyI	GRCGYC	1 cut(s)	910
AdeI	CACNNNGTG	1 cut(s)	1240
AfaI	GTAC	2 cut(s)	1283, 1528
AflIII	ACRYGT	1 cut(s)	644
AgeI	ACCGGT	1 cut(s)	1292
AgsI	TTSAA	2 cut(s)	28, 884
AjiI	CACGTC	1 cut(s)	647
AjnI	CCWGG	1 cut(s)	1086
Alw26I	GTCTC	3 cut(s)	284, 1200, 1342
AlwI	GGATC	3 cut(s)	767, 1181, 1439
AlwNI	CAGNNNCTG	1 cut(s)	335
AoxI	GGCC	2 cut(s)	239, 432
ApeKI	GCWGC	6 cut(s)	326, 329, 332, 359, 941, 1693
ApoI	RAATTY	2 cut(s)	1148, 1484
AsiGI	ACCGGT	1 cut(s)	1292
Asp700I	GAANNNNTTC	1 cut(s)	879
AspLEI	GCGC	3 cut(s)	754, 928, 1165
AspS9I	GGNCC	4 cut(s)	240, 248, 454, 859
AsuHPI	GGTGA	3 cut(s)	126, 578, 1270
AvaII	GGWCC	3 cut(s)	248, 454, 859
BaeGI	GKGCMC	2 cut(s)	35, 79
BanII	GRGCYC	1 cut(s)	731
BbsI	GAAGAC	4 cut(s)	5, 94, 722, 1589
BbvI	GCAGC	6 cut(s)	338, 341, 344, 346, 928, 1705
BccI	CCATC	4 cut(s)	239, 1558, 1565, 1603
BceAI	ACGGC	1 cut(s)	447
BcgI	CGANNNNNNTGC	2 cut(s)	1301, 1335
BciT130I	CCWGG	1 cut(s)	1088
BciVI	GTATCC	1 cut(s)	136
BclI	TGATCA	3 cut(s)	763, 1008, 1204
BcoDI	GTCTC	3 cut(s)	284, 1200, 1342
BfaI	CTAG	2 cut(s)	497, 1391
BfuI	GTATCC	1 cut(s)	136
BglII	AGATCT	2 cut(s)	638, 1078
BisI	GCNGC	6 cut(s)	327, 330, 333, 360, 942, 1694
BlsI	GCNGC	6 cut(s)	328, 331, 334, 361, 943, 1695
Bme1390I	CCNGG	1 cut(s)	1088
Bme18I	GGWCC	3 cut(s)	248, 454, 859
BmgBI	CACGTC	1 cut(s)	647
BmgT120I	GGNCC	4 cut(s)	240, 248, 454, 859
BmiI	GGNNCC	1 cut(s)	455
BmrFI	CCNGG	1 cut(s)	1088
BmsI	GCATC	5 cut(s)	370, 502, 548, 704, 1120
BpiI	GAAGAC	4 cut(s)	5, 94, 722, 1589
BpmI	CTGGAG	2 cut(s)	626, 966
BsaHI	GRCGYC	1 cut(s)	910
BsaJI	CCNNGG	1 cut(s)	1382
BsaWI	WCCGGW	1 cut(s)	1292
BsaXI	ACNNNNNCTCC	2 cut(s)	428, 458
Bse118I	RCCGGY	2 cut(s)	136, 1292
Bse1I	ACTGG	2 cut(s)	457, 724
Bse3DI	GCAATG	1 cut(s)	122
BseBI	CCWGG	1 cut(s)	1088
BseDI	CCNNGG	1 cut(s)	1382
BseGI	GGATG	3 cut(s)	1071, 1569, 1576
BseMI	GCAATG	1 cut(s)	122
BseMII	CTCAG	4 cut(s)	35, 249, 279, 456
BseNI	ACTGG	2 cut(s)	457, 724
BseRI	GAGGAG	1 cut(s)	623
BseSI	GKGCMC	2 cut(s)	35, 79
BseX3I	CGGCCG	1 cut(s)	432
BseXI	GCAGC	6 cut(s)	338, 341, 344, 346, 928, 1705
BseYI	CCCAGC	1 cut(s)	1061
BsgI	GTGCAG	2 cut(s)	141, 1117
Bsh1236I	CGCG	1 cut(s)	1163
Bsh1285I	CGRYCG	1 cut(s)	435
BshFI	GGCC	2 cut(s)	241, 434
BshTI	ACCGGT	1 cut(s)	1292
BsiEI	CGRYCG	1 cut(s)	435
BsiSI	CCGG	2 cut(s)	137, 1293
BslFI	GGGAC	1 cut(s)	467
BsmAI	GTCTC	3 cut(s)	284, 1200, 1342
BsmFI	GGGAC	1 cut(s)	467
BsmI	GAATGC	1 cut(s)	1652
BsnI	GGCC	2 cut(s)	241, 434
Bsp1286I	GDGCHC	3 cut(s)	35, 79, 731
Bsp1407I	TGTACA	1 cut(s)	1281
Bsp143I	GATC	9 cut(s)	638, 763, 772, 952, 1008, 1078, 1173, 1204, 1444
BspACI	CCGC	4 cut(s)	113, 500, 1189, 1358
BspANI	GGCC	2 cut(s)	241, 434
BspCNI	CTCAG	4 cut(s)	34, 250, 280, 457
BspFNI	CGCG	1 cut(s)	1163
BspHI	TCATGA	1 cut(s)	1488
BspLI	GGNNCC	1 cut(s)	455
BspPI	GGATC	3 cut(s)	767, 1181, 1439
BsrDI	GCAATG	1 cut(s)	122
BsrFI	RCCGGY	2 cut(s)	136, 1292
BsrGI	TGTACA	1 cut(s)	1281
BsrI	ACTGG	2 cut(s)	457, 724
BssAI	RCCGGY	2 cut(s)	136, 1292
BssECI	CCNNGG	1 cut(s)	1382
BssMI	GATC	9 cut(s)	638, 763, 772, 952, 1008, 1078, 1173, 1204, 1444
BssNAI	GTATAC	1 cut(s)	977
BssNI	GRCGYC	1 cut(s)	910
Bst1107I	GTATAC	1 cut(s)	977
Bst2UI	CCWGG	1 cut(s)	1088
Bst4CI	ACNGT	4 cut(s)	401, 823, 1281, 1286
Bst6I	CTCTTC	2 cut(s)	1340, 1670
BstACI	GRCGYC	1 cut(s)	910
BstAPI	GCANNNNNTGC	3 cut(s)	359, 993, 1186
BstAUI	TGTACA	1 cut(s)	1281
BstC8I	GCNNGC	2 cut(s)	481, 1182
BstDEI	CTNAG	6 cut(s)	21, 173, 258, 288, 465, 788
BstF5I	GGATG	3 cut(s)	1071, 1569, 1576
BstFNI	CGCG	1 cut(s)	1163
BstHHI	GCGC	3 cut(s)	754, 928, 1165
BstKTI	GATC	9 cut(s)	641, 766, 775, 955, 1011, 1081, 1176, 1207, 1447
BstMAI	GTCTC	3 cut(s)	284, 1200, 1342
BstMBI	GATC	9 cut(s)	638, 763, 772, 952, 1008, 1078, 1173, 1204, 1444
BstMCI	CGRYCG	1 cut(s)	435
BstNI	CCWGG	1 cut(s)	1088
BstSCI	CCNGG	1 cut(s)	1086
BstSLI	GKGCMC	2 cut(s)	35, 79
BstUI	CGCG	1 cut(s)	1163
BstV1I	GCAGC	6 cut(s)	338, 341, 344, 346, 928, 1705
BstV2I	GAAGAC	4 cut(s)	5, 94, 722, 1589
BstX2I	RGATCY	3 cut(s)	638, 1078, 1444
BstYI	RGATCY	3 cut(s)	638, 1078, 1444
BstZ17I	GTATAC	1 cut(s)	977
BstZI	CGGCCG	1 cut(s)	432
BsuI	GTATCC	1 cut(s)	136
BsuRI	GGCC	2 cut(s)	241, 434
BtgZI	GCGATG	1 cut(s)	321
BtrI	CACGTC	1 cut(s)	647
BtsCI	GGATG	3 cut(s)	1071, 1569, 1576
BtsI	GCAGTG	3 cut(s)	230, 534, 935
BtsIMutI	CAGTG	7 cut(s)	230, 255, 534, 627, 819, 935, 1291
Cac8I	GCNNGC	2 cut(s)	481, 1182
CaiI	CAGNNNCTG	1 cut(s)	335
CciI	TCATGA	1 cut(s)	1488
CfoI	GCGC	3 cut(s)	754, 928, 1165
Cfr10I	RCCGGY	2 cut(s)	136, 1292
Cfr13I	GGNCC	4 cut(s)	240, 248, 454, 859
Csp6I	GTAC	2 cut(s)	1282, 1527
CspAI	ACCGGT	1 cut(s)	1292
CviAII	CATG	5 cut(s)	836, 983, 1237, 1354, 1489
CviQI	GTAC	2 cut(s)	1282, 1527
DdeI	CTNAG	6 cut(s)	21, 173, 258, 288, 465, 788
DpnI	GATC	9 cut(s)	640, 765, 774, 954, 1010, 1080, 1175, 1206, 1446
DpnII	GATC	9 cut(s)	638, 763, 772, 952, 1008, 1078, 1173, 1204, 1444
DraI	TTTAAA	1 cut(s)	1147
DraIII	CACNNNGTG	1 cut(s)	1240
EaeI	YGGCCR	1 cut(s)	432
EagI	CGGCCG	1 cut(s)	432
Eam1104I	CTCTTC	2 cut(s)	1340, 1670
EarI	CTCTTC	2 cut(s)	1340, 1670
EclXI	CGGCCG	1 cut(s)	432
Eco24I	GRGCYC	1 cut(s)	731
Eco47I	GGWCC	3 cut(s)	248, 454, 859
Eco52I	CGGCCG	1 cut(s)	432
Eco57I	CTGAAG	3 cut(s)	357, 603, 887
EcoO109I	RGGNCCY	1 cut(s)	859
EcoRI	GAATTC	1 cut(s)	1484
EcoRII	CCWGG	1 cut(s)	1086
EcoT38I	GRGCYC	1 cut(s)	731
FaeI	CATG	5 cut(s)	839, 986, 1240, 1357, 1492
FalI	AAGNNNNNCTT	4 cut(s)	585, 617, 1213, 1245
FaqI	GGGAC	1 cut(s)	467
FatI	CATG	5 cut(s)	835, 982, 1236, 1353, 1488
FbaI	TGATCA	3 cut(s)	763, 1008, 1204
FblI	GTMKAC	1 cut(s)	976
Fnu4HI	GCNGC	6 cut(s)	327, 330, 333, 360, 942, 1694
FokI	GGATG	3 cut(s)	1078, 1576, 1583
FriOI	GRGCYC	1 cut(s)	731
Fsp4HI	GCNGC	6 cut(s)	327, 330, 333, 360, 942, 1694
FspBI	CTAG	2 cut(s)	497, 1391
FspI	TGCGCA	2 cut(s)	753, 927
GlaI	GCGC	3 cut(s)	753, 927, 1164
GluI	GCNGC	6 cut(s)	327, 330, 333, 360, 942, 1694
GsaI	CCCAGC	1 cut(s)	1065
GsuI	CTGGAG	2 cut(s)	626, 966
HaeIII	GGCC	2 cut(s)	241, 434
HapII	CCGG	2 cut(s)	137, 1293
HhaI	GCGC	3 cut(s)	754, 928, 1165
Hin1I	GRCGYC	1 cut(s)	910
Hin1II	CATG	5 cut(s)	839, 986, 1240, 1357, 1492
Hin6I	GCGC	3 cut(s)	752, 926, 1163
HinP1I	GCGC	3 cut(s)	752, 926, 1163
HincII	GTYRAC	1 cut(s)	429
HindII	GTYRAC	1 cut(s)	429
HindIII	AAGCTT	3 cut(s)	170, 276, 812
HpaII	CCGG	2 cut(s)	137, 1293
HphI	GGTGA	3 cut(s)	126, 578, 1270
Hpy166II	GTNNAC	5 cut(s)	228, 429, 462, 908, 977
Hpy188III	TCNNGA	5 cut(s)	605, 1212, 1448, 1489, 1657
Hpy8I	GTNNAC	5 cut(s)	228, 429, 462, 908, 977
HpyAV	CCTTC	6 cut(s)	261, 463, 627, 872, 1085, 1437
HpyCH4III	ACNGT	4 cut(s)	401, 823, 1281, 1286
HpyCH4IV	ACGT	8 cut(s)	475, 646, 742, 910, 973, 1460, 1549, 1586
HpyF3I	CTNAG	6 cut(s)	21, 173, 258, 288, 465, 788
HpySE526I	ACGT	8 cut(s)	475, 646, 742, 910, 973, 1460, 1549, 1586
Hsp92I	GRCGYC	1 cut(s)	910
Hsp92II	CATG	5 cut(s)	839, 986, 1240, 1357, 1492
HspAI	GCGC	3 cut(s)	752, 926, 1163
Ksp22I	TGATCA	3 cut(s)	763, 1008, 1204
Kzo9I	GATC	9 cut(s)	638, 763, 772, 952, 1008, 1078, 1173, 1204, 1444
LmnI	GCTCC	4 cut(s)	449, 610, 1058, 1115
Lsp1109I	GCAGC	6 cut(s)	338, 341, 344, 346, 928, 1705
LweI	GCATC	5 cut(s)	370, 502, 548, 704, 1120
MaeI	CTAG	2 cut(s)	497, 1391
MaeII	ACGT	8 cut(s)	475, 646, 742, 910, 973, 1460, 1549, 1586
MaeIII	GTNAC	2 cut(s)	401, 1456
MalI	GATC	9 cut(s)	640, 765, 774, 954, 1010, 1080, 1175, 1206, 1446
MboI	GATC	9 cut(s)	638, 763, 772, 952, 1008, 1078, 1173, 1204, 1444
MflI	RGATCY	3 cut(s)	638, 1078, 1444
MhlI	GDGCHC	3 cut(s)	35, 79, 731
MluCI	AATT	5 cut(s)	516, 1048, 1148, 1317, 1484
MlyI	GAGTC	6 cut(s)	566, 957, 1020, 1344, 1511, 1652
MmeI	TCCRAC	3 cut(s)	133, 1494, 1532
MroXI	GAANNNNTTC	1 cut(s)	879
MseI	TTAA	5 cut(s)	146, 393, 419, 965, 1146
MspA1I	CMGCKG	1 cut(s)	335
MspI	CCGG	2 cut(s)	137, 1293
MspR9I	CCNGG	1 cut(s)	1088
Mva1269I	GAATGC	1 cut(s)	1652
MvaI	CCWGG	1 cut(s)	1088
MvnI	CGCG	1 cut(s)	1163
NdeII	GATC	9 cut(s)	638, 763, 772, 952, 1008, 1078, 1173, 1204, 1444
NlaIII	CATG	5 cut(s)	839, 986, 1240, 1357, 1492
NlaIV	GGNNCC	1 cut(s)	455
NsbI	TGCGCA	2 cut(s)	753, 927
PagI	TCATGA	1 cut(s)	1488
PctI	GAATGC	1 cut(s)	1652
PdmI	GAANNNNTTC	1 cut(s)	879
PfeI	GAWTC	5 cut(s)	41, 197, 203, 575, 1411
PfoI	TCCNGGA	1 cut(s)	1086
PinAI	ACCGGT	1 cut(s)	1292
PkrI	GCNGC	6 cut(s)	328, 331, 334, 361, 943, 1695
PleI	GAGTC	6 cut(s)	565, 956, 1020, 1344, 1511, 1651
PpsI	GAGTC	6 cut(s)	565, 956, 1020, 1344, 1511, 1651
PpuMI	RGGWCCY	1 cut(s)	859
Psp5II	RGGWCCY	1 cut(s)	859
Psp6I	CCWGG	1 cut(s)	1086
PspFI	CCCAGC	1 cut(s)	1061
PspGI	CCWGG	1 cut(s)	1086
PspN4I	GGNNCC	1 cut(s)	455
PspPI	GGNCC	4 cut(s)	240, 248, 454, 859
PspPPI	RGGWCCY	1 cut(s)	859
PstNI	CAGNNNCTG	1 cut(s)	335
PsuI	RGATCY	3 cut(s)	638, 1078, 1444
PvuII	CAGCTG	1 cut(s)	335
RsaI	GTAC	2 cut(s)	1283, 1528
RsaNI	GTAC	2 cut(s)	1282, 1527
SaqAI	TTAA	5 cut(s)	146, 393, 419, 965, 1146
SatI	GCNGC	6 cut(s)	327, 330, 333, 360, 942, 1694
Sau3AI	GATC	9 cut(s)	638, 763, 772, 952, 1008, 1078, 1173, 1204, 1444
Sau96I	GGNCC	4 cut(s)	240, 248, 454, 859
SchI	GAGTC	6 cut(s)	566, 957, 1020, 1344, 1511, 1652
ScrFI	CCNGG	1 cut(s)	1088
SduI	GDGCHC	3 cut(s)	35, 79, 731
SfaNI	GCATC	5 cut(s)	370, 502, 548, 704, 1120
SgrAI	CRCCGGYG	1 cut(s)	136
SinI	GGWCC	3 cut(s)	248, 454, 859
Sse9I	AATT	5 cut(s)	516, 1048, 1148, 1317, 1484
SsiI	CCGC	4 cut(s)	113, 500, 1189, 1358
SspMI	CTAG	2 cut(s)	497, 1391
StyD4I	CCNGG	1 cut(s)	1086
TaaI	ACNGT	4 cut(s)	401, 823, 1281, 1286
TaiI	ACGT	8 cut(s)	478, 649, 745, 913, 976, 1463, 1552, 1589
TaqI	TCGA	7 cut(s)	189, 725, 951, 1024, 1037, 1154, 1340
TasI	AATT	5 cut(s)	516, 1048, 1148, 1317, 1484
TatI	WGTACW	1 cut(s)	1281
TfiI	GAWTC	5 cut(s)	41, 197, 203, 575, 1411
Tru1I	TTAA	5 cut(s)	146, 393, 419, 965, 1146
Tru9I	TTAA	5 cut(s)	146, 393, 419, 965, 1146
TscAI	CASTG	7 cut(s)	230, 262, 541, 627, 826, 935, 1291
TseI	GCWGC	6 cut(s)	326, 329, 332, 359, 941, 1693
TspDTI	ATGAA	6 cut(s)	324, 1082, 1358, 1424, 1477, 1595
TspGWI	ACGGA	1 cut(s)	696
TspRI	CASTG	7 cut(s)	230, 262, 541, 627, 826, 935, 1291
VpaK11BI	GGWCC	3 cut(s)	248, 454, 859
XapI	RAATTY	2 cut(s)	1148, 1484
XmiI	GTMKAC	1 cut(s)	976
XmnI	GAANNNNTTC	1 cut(s)	879
XspI	CTAG	2 cut(s)	497, 1391
ZraI	GACGTC	1 cut(s)	911

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.