Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0009990

Physical Location & Seq

Genomic Coordinates Reverse (-)

39334904 .. 39339826

Gene Structure 4923 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G027560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGTTGTTCATTTCTCACCCCACTATCTCTTCCGCACCCCAAAAACAAGAAGAACAAGAGAACAAGAAGAAGGCCTCCGGAGCTAACAACCTCTTTGATGACATTGCTGCCATGGGCTTCCAAGCAAAAGCTAGGTATCCTATCAGCTTCCGCGCCCAATATATGTTATCTTCTACTACAGCACATTCAACATCAACAGGAACAGCTAACTTGCTTGATATGGAGGAGCTCAGATTACCTTCTTTACAAGTTAATTCTGATTCTCTGATTGCAAATCGACCATGGACATACACGGGGGCAATCGGCCCTCCCACTGAGGCAAACTATGGGGCAGCTTTAGCCACTGAAACACTTCTTACAAGTGAAGAGGCTGTAATAGCAGCTGCTGCCGCTGAAGCTGTTACTCTTGCAAAAGCGGCTCTGAAGGTTGCAAAGGATGTGGCTTTGCTGGTTAGAAATAATCACTACACTAAAGCAGAAAGTTCATCTCCAGTTTCTCGTGGGACCGATGCCTTTCATATCAACTGGGCTCAGCATCTGGAAACTGAACAAACTCTTAGAATTGGAGATTCCATGGCATCTGAAACCGCACTGATGGAGGATCATTTCATTCAAATTGCCATAAAAGAGTCTGAAGATGTGGAGCCAGCAAATGAAGAATTTGAACTTCTGCAGGAGCAACTTTCCAACGGTATAGCTGCGAGATCAAGGCGCCAAATGGAAAGGAAGGCAAGAAGAGCCAGAGCAGCAGAAAAGGCTGCTGCCAGTGTTGTGTCCGTGAAGTCTGGTTCAACCAGCCGAAAAAAGCGTGCTTCTTTACAAGACGTAGACCATTCTGATCCATTGCGTTACTTGAGAACAACTACCCATACTTCTAGACTTCTTACTGCAACTGAAGAAATTGAACTATCAGAAGGAATACAGGAACTTCTAAAACTGGAAAAGCTCCAGGAGGATCTTGCACAAAGATGCGGCACTCAGCCCACCTTTGCACAATGGGCTGCAGCAGCAGGAGTTGATCAGAAGACATTAAGGAAGCGGGTAAACTATGGTATCATGTGCAAAGACAAAATGATTAAGAGCAACATACGGCTTGTTATATCAATTGCAAAAAATTATCAGGGAGCTGGGATGAATCTTCAAGATCTCGTGCAGGAAGGATGTCGTGGCCTTGTAAGAGGTGCAGAAAAATTTGATGCTTCAAAGGGTTTTAAGTTCTCAACCTATGCTCACTGGTGGATTAAACAGGCTGTTCGAAAGTCTCTTTCTGATCAATCGAGGACAATTCGTTTACCATTTCACATGGTGGAGGCAACTTACAGAGTGAGAGAGGCTAAAAAGCAATTGTATAGTGTAAACGGAAGACATCCTAATGATGAAGAAGTTGCAGAGGCAACAGGGCTATCGATGAAGAGGCTTGCTGCTGTCTTACTGACTCCAAAAGCTCCTAGATCGCTGGAGCAGAAAATTGGAATCAACCAGAATCTTAAACCTTCGGATGTAATTGCAGATCCTGACGCAGAAACAGCTGAAGACCTGTTGATGAAAAAATTCATGAGACAGGATTTGGAGAAGGTACTAGATAGTCTCAATCCAAGAGAGAAGCAGGTGATCAGATGGAGGTTTGGAATGGAGGATGGGAGGATGAAGACATTGCAAGAGATAGGGGAGCTGATGGGTGTTAGTAGAGAGAGAATTAGACAAATTGAGTCATGTGCGTTCCGAAAGCTGAAGAACAAGAAAAGAACTAAACATTTGCAGCAGTATGTGCTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006399 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009639 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r1_2 Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

592

Amino Acids

66.22

Weight (kDa)

9.3

Isoelectric Point (pI)

46.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	358 - 428	2.8e-20	Sigma-70 region 2
Sigma70_r3	PF04539	437 - 512	3.1e-17	Sigma-70 region 3
Sigma70_r4	PF04545	526 - 578	5.1e-19	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08540
fragaria_vesca	FvH4_1g29160 FvH4_1g29160
malus_domestica	MD12G1111900.v1.1 MD14G1100900.v1.1
prunus_persica	Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1
pyrus_communis	pycom12g09170 pycom14g08810
rosa_chinensis	RchiOBHm_Chr3g0494351 RchiOBHm_Chr3g0494481
rosa_laevigata	RLG00000022672
rosa_multiflora	Rmu_sc0000152.1_g000008
rosa_roxburghii	Rroxscaffold_6G00391100
rosa_rugosa	Rorug03G0265600
rosa_samantha	Rh3BG350900 Rh3CG347600 Rh3DG350200
rosa_wichuraiana	Rw3G027560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1597
Acc36I	ACCTGC	1 cut(s)	1597
AccB1I	GGYRCC	1 cut(s)	711
AccI	GTMKAC	1 cut(s)	828
AccII	CGCG	1 cut(s)	153
AccIII	TCCGGA	1 cut(s)	77
AciI	CCGC	7 cut(s)	33, 151, 390, 416, 588, 972, 1039
AclWI	GGATC	4 cut(s)	609, 833, 963, 1505
AcsI	RAATTY	3 cut(s)	659, 1190, 1550
AcuI	CTGAAG	6 cut(s)	414, 443, 654, 915, 1551, 1751
AcyI	GRCGYC	1 cut(s)	712
AdeI	CACNNNGTG	1 cut(s)	1306
AfaI	GTAC	1 cut(s)	1578
AgsI	TTSAA	7 cut(s)	189, 614, 665, 792, 905, 1142, 1203
AjnI	CCWGG	1 cut(s)	948
Alw21I	GWGCWC	1 cut(s)	231
Alw26I	GTCTC	3 cut(s)	1266, 1552, 1592
AlwI	GGATC	4 cut(s)	609, 833, 963, 1505
AlwNI	CAGNNNCTG	3 cut(s)	386, 538, 1514
Aor13HI	TCCGGA	1 cut(s)	77
AoxI	GGCC	3 cut(s)	72, 304, 1168
ApoI	RAATTY	3 cut(s)	659, 1190, 1550
Asp700I	GAANNNNTTC	2 cut(s)	351, 1550
AspLEI	GCGC	2 cut(s)	155, 714
AspS9I	GGNCC	2 cut(s)	305, 504
AsuHPI	GGTGA	2 cut(s)	8, 1621
AsuII	TTCGAA	1 cut(s)	1255
AvaII	GGWCC	1 cut(s)	504
BaeI	ACNNNNGTAYC	2 cut(s)	1036, 1069
BanI	GGYRCC	1 cut(s)	711
BanII	GRGCYC	2 cut(s)	231, 532
BauI	CACGAG	2 cut(s)	498, 1148
BbsI	GAAGAC	4 cut(s)	1031, 1369, 1539, 1655
Bbv12I	GWGCWC	1 cut(s)	231
BccI	CCATC	4 cut(s)	589, 1611, 1631, 1669
BceAI	ACGGC	1 cut(s)	1106
BciT130I	CCWGG	1 cut(s)	950
BciVI	GTATCC	1 cut(s)	147
BclI	TGATCA	3 cut(s)	1018, 1270, 1611
BcoDI	GTCTC	3 cut(s)	1266, 1552, 1592
BfaI	CTAG	4 cut(s)	132, 876, 1449, 1580
BfmI	CTRYAG	3 cut(s)	177, 671, 1002
BfoI	RGCGCY	1 cut(s)	715
BfuAI	ACCTGC	1 cut(s)	1597
BfuI	GTATCC	1 cut(s)	147
BglII	AGATCT	1 cut(s)	1144
BlpI	GCTNAGC	1 cut(s)	531
Bme1390I	CCNGG	1 cut(s)	950
Bme18I	GGWCC	1 cut(s)	504
BmgT120I	GGNCC	2 cut(s)	305, 504
BmiI	GGNNCC	3 cut(s)	505, 645, 713
BmrFI	CCNGG	1 cut(s)	950
BmrI	ACTGGG	1 cut(s)	535
BmsI	GCATC	5 cut(s)	499, 544, 587, 959, 1186
BmuI	ACTGGG	1 cut(s)	535
BpiI	GAAGAC	4 cut(s)	1031, 1369, 1539, 1655
BpmI	CTGGAG	3 cut(s)	474, 932, 1478
Bpu1102I	GCTNAGC	1 cut(s)	531
Bpu14I	TTCGAA	1 cut(s)	1255
BpuEI	CTTGAG	1 cut(s)	874
Bsa29I	ATCGAT	1 cut(s)	1406
BsaHI	GRCGYC	1 cut(s)	712
BsaJI	CCNNGG	3 cut(s)	111, 281, 573
BsaWI	WCCGGW	1 cut(s)	77
Bse1I	ACTGG	5 cut(s)	491, 530, 765, 942, 1238
Bse3DI	GCAATG	3 cut(s)	102, 842, 1652
BseAI	TCCGGA	1 cut(s)	77
BseBI	CCWGG	1 cut(s)	950
BseCI	ATCGAT	1 cut(s)	1406
BseDI	CCNNGG	3 cut(s)	111, 281, 573
BseGI	GGATG	7 cut(s)	442, 1137, 1166, 1366, 1504, 1642, 1650
BseMI	GCAATG	3 cut(s)	102, 842, 1652
BseMII	CTCAG	4 cut(s)	244, 306, 545, 992
BseNI	ACTGG	5 cut(s)	491, 530, 765, 942, 1238
BseRI	GAGGAG	1 cut(s)	239
BseYI	CCCAGC	1 cut(s)	1127
BsgI	GTGCAG	2 cut(s)	1172, 1203
Bsh1236I	CGCG	1 cut(s)	153
BshFI	GGCC	3 cut(s)	74, 306, 1170
BshNI	GGYRCC	1 cut(s)	711
BshVI	ATCGAT	1 cut(s)	1406
BsiHKAI	GWGCWC	1 cut(s)	231
BsiSI	CCGG	1 cut(s)	78
BslFI	GGGAC	1 cut(s)	517
BsmAI	GTCTC	3 cut(s)	1266, 1552, 1592
BsmFI	GGGAC	1 cut(s)	517
BsnI	GGCC	3 cut(s)	74, 306, 1170
Bsp119I	TTCGAA	1 cut(s)	1255
Bsp1286I	GDGCHC	2 cut(s)	231, 532
Bsp13I	TCCGGA	1 cut(s)	77
Bsp1720I	GCTNAGC	1 cut(s)	531
Bsp19I	CCATGG	3 cut(s)	111, 281, 573
BspACI	CCGC	7 cut(s)	33, 151, 390, 416, 588, 972, 1039
BspANI	GGCC	3 cut(s)	74, 306, 1170
BspCNI	CTCAG	4 cut(s)	243, 307, 544, 991
BspDI	ATCGAT	1 cut(s)	1406
BspEI	TCCGGA	1 cut(s)	77
BspFNI	CGCG	1 cut(s)	153
BspHI	TCATGA	1 cut(s)	1554
BspLI	GGNNCC	3 cut(s)	505, 645, 713
BspMAI	CTGCAG	2 cut(s)	675, 1006
BspMI	ACCTGC	1 cut(s)	1597
BspPI	GGATC	4 cut(s)	609, 833, 963, 1505
BspQI	GCTCTTC	1 cut(s)	730
BspT104I	TTCGAA	1 cut(s)	1255
BspT107I	GGYRCC	1 cut(s)	711
BsrDI	GCAATG	3 cut(s)	102, 842, 1652
BsrI	ACTGG	5 cut(s)	491, 530, 765, 942, 1238
BssECI	CCNNGG	3 cut(s)	111, 281, 573
BssNI	GRCGYC	1 cut(s)	712
BssSI	CACGAG	2 cut(s)	498, 1148
BssT1I	CCWWGG	3 cut(s)	111, 281, 573
Bst2BI	CACGAG	2 cut(s)	498, 1148
Bst2UI	CCWGG	1 cut(s)	950
Bst4CI	ACNGT	1 cut(s)	692
Bst6I	CTCTTC	4 cut(s)	34, 360, 730, 1406
BstACI	GRCGYC	1 cut(s)	712
BstAPI	GCANNNNNTGC	2 cut(s)	386, 1768
BstBI	TTCGAA	1 cut(s)	1255
BstC8I	GCNNGC	3 cut(s)	648, 810, 1419
BstDEI	CTNAG	5 cut(s)	230, 315, 531, 557, 978
BstDSI	CCRYGG	3 cut(s)	111, 281, 573
BstF5I	GGATG	7 cut(s)	442, 1137, 1166, 1366, 1504, 1642, 1650
BstFNI	CGCG	1 cut(s)	153
BstH2I	RGCGCY	1 cut(s)	715
BstHHI	GCGC	2 cut(s)	155, 714
BstMAI	GTCTC	3 cut(s)	1266, 1552, 1592
BstNI	CCWGG	1 cut(s)	950
BstSCI	CCNGG	1 cut(s)	948
BstSFI	CTRYAG	3 cut(s)	177, 671, 1002
BstUI	CGCG	1 cut(s)	153
BstV2I	GAAGAC	4 cut(s)	1031, 1369, 1539, 1655
BstX2I	RGATCY	3 cut(s)	955, 1144, 1510
BstYI	RGATCY	3 cut(s)	955, 1144, 1510
Bsu15I	ATCGAT	1 cut(s)	1406
BsuI	GTATCC	1 cut(s)	147
BsuRI	GGCC	3 cut(s)	74, 306, 1170
BsuTUI	ATCGAT	1 cut(s)	1406
BtgI	CCRYGG	3 cut(s)	111, 281, 573
BtsCI	GGATG	7 cut(s)	442, 1137, 1166, 1366, 1504, 1642, 1650
BtsIMutI	CAGTG	5 cut(s)	312, 342, 590, 772, 1231
BveI	ACCTGC	1 cut(s)	1597
Cac8I	GCNNGC	3 cut(s)	648, 810, 1419
CaiI	CAGNNNCTG	3 cut(s)	386, 538, 1514
CciI	TCATGA	1 cut(s)	1554
CfoI	GCGC	2 cut(s)	155, 714
Cfr13I	GGNCC	2 cut(s)	305, 504
ClaI	ATCGAT	1 cut(s)	1406
CseI	GACGC	1 cut(s)	1526
Csp6I	GTAC	1 cut(s)	1577
CspCI	CAANNNNNGTGG	2 cut(s)	420, 455
CviAII	CATG	7 cut(s)	112, 282, 574, 1057, 1303, 1555, 1713
CviQI	GTAC	1 cut(s)	1577
DdeI	CTNAG	5 cut(s)	230, 315, 531, 557, 978
DinI	GGCGCC	1 cut(s)	713
DraIII	CACNNNGTG	1 cut(s)	1306
Eam1104I	CTCTTC	4 cut(s)	34, 360, 730, 1406
EarI	CTCTTC	4 cut(s)	34, 360, 730, 1406
Ecl136II	GAGCTC	1 cut(s)	229
Eco130I	CCWWGG	3 cut(s)	111, 281, 573
Eco147I	AGGCCT	1 cut(s)	74
Eco24I	GRGCYC	2 cut(s)	231, 532
Eco47I	GGWCC	1 cut(s)	504
Eco53kI	GAGCTC	1 cut(s)	229
Eco57I	CTGAAG	6 cut(s)	414, 443, 654, 915, 1551, 1751
EcoICRI	GAGCTC	1 cut(s)	229
EcoRII	CCWGG	1 cut(s)	948
EcoT14I	CCWWGG	3 cut(s)	111, 281, 573
EcoT38I	GRGCYC	2 cut(s)	231, 532
EgeI	GGCGCC	1 cut(s)	713
EheI	GGCGCC	1 cut(s)	713
ErhI	CCWWGG	3 cut(s)	111, 281, 573
FaeI	CATG	7 cut(s)	115, 285, 577, 1060, 1306, 1558, 1716
FaqI	GGGAC	1 cut(s)	517
FatI	CATG	7 cut(s)	111, 281, 573, 1056, 1302, 1554, 1712
FauI	CCCGC	1 cut(s)	1032
FbaI	TGATCA	3 cut(s)	1018, 1270, 1611
FblI	GTMKAC	1 cut(s)	828
FokI	GGATG	7 cut(s)	449, 1144, 1173, 1353, 1511, 1649, 1657
FriOI	GRGCYC	2 cut(s)	231, 532
FspBI	CTAG	4 cut(s)	132, 876, 1449, 1580
GlaI	GCGC	2 cut(s)	154, 713
GsaI	CCCAGC	1 cut(s)	1131
GsuI	CTGGAG	3 cut(s)	474, 932, 1478
HaeII	RGCGCY	1 cut(s)	715
HaeIII	GGCC	3 cut(s)	74, 306, 1170
HapII	CCGG	1 cut(s)	78
HgaI	GACGC	1 cut(s)	1526
HhaI	GCGC	2 cut(s)	155, 714
Hin1I	GRCGYC	1 cut(s)	712
Hin1II	CATG	7 cut(s)	115, 285, 577, 1060, 1306, 1558, 1716
Hin6I	GCGC	2 cut(s)	153, 712
HinP1I	GCGC	2 cut(s)	153, 712
HinfI	GANTC	8 cut(s)	260, 569, 629, 1135, 1435, 1473, 1483, 1709
HpaII	CCGG	1 cut(s)	78
HphI	GGTGA	2 cut(s)	8, 1621
Hpy166II	GTNNAC	4 cut(s)	829, 1045, 1292, 1357
Hpy188III	TCNNGA	6 cut(s)	78, 539, 876, 1142, 1514, 1555
Hpy8I	GTNNAC	4 cut(s)	829, 1045, 1292, 1357
HpyAV	CCTTC	8 cut(s)	64, 249, 418, 721, 908, 1151, 1503, 1567
HpyCH4III	ACNGT	1 cut(s)	692
HpyCH4IV	ACGT	1 cut(s)	825
HpyF3I	CTNAG	5 cut(s)	230, 315, 531, 557, 978
HpySE526I	ACGT	1 cut(s)	825
Hsp92I	GRCGYC	1 cut(s)	712
Hsp92II	CATG	7 cut(s)	115, 285, 577, 1060, 1306, 1558, 1716
HspAI	GCGC	2 cut(s)	153, 712
KasI	GGCGCC	1 cut(s)	711
Kpn2I	TCCGGA	1 cut(s)	77
Ksp22I	TGATCA	3 cut(s)	1018, 1270, 1611
LguI	GCTCTTC	1 cut(s)	730
LmnI	GCTCC	9 cut(s)	80, 226, 643, 676, 951, 1124, 1450, 1459, 1669
LweI	GCATC	5 cut(s)	499, 544, 587, 959, 1186
MaeI	CTAG	4 cut(s)	132, 876, 1449, 1580
MaeII	ACGT	1 cut(s)	825
MaeIII	GTNAC	2 cut(s)	400, 848
MfeI	CAATTG	2 cut(s)	1104, 1343
MflI	RGATCY	3 cut(s)	955, 1144, 1510
MhlI	GDGCHC	2 cut(s)	231, 532
Mly113I	GGCGCC	1 cut(s)	712
MlyI	GAGTC	3 cut(s)	638, 1429, 1718
MmeI	TCCRAC	1 cut(s)	711
MroI	TCCGGA	1 cut(s)	77
MroXI	GAANNNNTTC	2 cut(s)	351, 1550
MseI	TTAA	6 cut(s)	252, 1031, 1077, 1212, 1242, 1488
MslI	CAYNNNNRTG	2 cut(s)	967, 1371
MspA1I	CMGCKG	3 cut(s)	383, 392, 1529
MspI	CCGG	1 cut(s)	78
MspR9I	CCNGG	1 cut(s)	950
MunI	CAATTG	2 cut(s)	1104, 1343
MvaI	CCWGG	1 cut(s)	950
MvnI	CGCG	1 cut(s)	153
NarI	GGCGCC	1 cut(s)	712
NcoI	CCATGG	3 cut(s)	111, 281, 573
NlaIII	CATG	7 cut(s)	115, 285, 577, 1060, 1306, 1558, 1716
NlaIV	GGNNCC	3 cut(s)	505, 645, 713
NspV	TTCGAA	1 cut(s)	1255
PagI	TCATGA	1 cut(s)	1554
PaqCI	CACCTGC	1 cut(s)	1597
PceI	AGGCCT	1 cut(s)	74
PciSI	GCTCTTC	1 cut(s)	730
PdmI	GAANNNNTTC	2 cut(s)	351, 1550
PfeI	GAWTC	5 cut(s)	260, 569, 1135, 1473, 1483
PfoI	TCCNGGA	1 cut(s)	948
PleI	GAGTC	3 cut(s)	637, 1429, 1717
PluTI	GGCGCC	1 cut(s)	715
PpsI	GAGTC	3 cut(s)	637, 1429, 1717
Psp124BI	GAGCTC	1 cut(s)	231
Psp6I	CCWGG	1 cut(s)	948
PspFI	CCCAGC	1 cut(s)	1127
PspGI	CCWGG	1 cut(s)	948
PspN4I	GGNNCC	3 cut(s)	505, 645, 713
PspPI	GGNCC	2 cut(s)	305, 504
PstI	CTGCAG	2 cut(s)	675, 1006
PstNI	CAGNNNCTG	3 cut(s)	386, 538, 1514
PsuI	RGATCY	3 cut(s)	955, 1144, 1510
PvuII	CAGCTG	2 cut(s)	383, 1529
RsaI	GTAC	1 cut(s)	1578
RsaNI	GTAC	1 cut(s)	1577
RseI	CAYNNNNRTG	2 cut(s)	967, 1371
SacI	GAGCTC	1 cut(s)	231
SapI	GCTCTTC	1 cut(s)	730
SaqAI	TTAA	6 cut(s)	252, 1031, 1077, 1212, 1242, 1488
Sau96I	GGNCC	2 cut(s)	305, 504
SchI	GAGTC	3 cut(s)	638, 1429, 1718
ScrFI	CCNGG	1 cut(s)	950
SduI	GDGCHC	2 cut(s)	231, 532
SfaNI	GCATC	5 cut(s)	499, 544, 587, 959, 1186
SfcI	CTRYAG	3 cut(s)	177, 671, 1002
SfoI	GGCGCC	1 cut(s)	713
SfuI	TTCGAA	1 cut(s)	1255
SinI	GGWCC	1 cut(s)	504
SmiMI	CAYNNNNRTG	2 cut(s)	967, 1371
SmlI	CTYRAG	1 cut(s)	853
SmoI	CTYRAG	1 cut(s)	853
SseBI	AGGCCT	1 cut(s)	74
SsiI	CCGC	7 cut(s)	33, 151, 390, 416, 588, 972, 1039
SspDI	GGCGCC	1 cut(s)	711
SspMI	CTAG	4 cut(s)	132, 876, 1449, 1580
SstI	GAGCTC	1 cut(s)	231
StuI	AGGCCT	1 cut(s)	74
StyD4I	CCNGG	1 cut(s)	948
StyI	CCWWGG	3 cut(s)	111, 281, 573
TaaI	ACNGT	1 cut(s)	692
TaiI	ACGT	1 cut(s)	828
TaqI	TCGA	4 cut(s)	277, 1255, 1277, 1406
TaqII	GACCGA	1 cut(s)	521
TauI	GCSGC	3 cut(s)	392, 419, 975
TfiI	GAWTC	5 cut(s)	260, 569, 1135, 1473, 1483
Tru1I	TTAA	6 cut(s)	252, 1031, 1077, 1212, 1242, 1488
Tru9I	TTAA	6 cut(s)	252, 1031, 1077, 1212, 1242, 1488
TscAI	CASTG	5 cut(s)	319, 349, 597, 772, 1238
TspGWI	ACGGA	2 cut(s)	766, 1374
TspRI	CASTG	5 cut(s)	319, 349, 597, 772, 1238
VpaK11BI	GGWCC	1 cut(s)	504
XapI	RAATTY	3 cut(s)	659, 1190, 1550
XbaI	TCTAGA	1 cut(s)	875
XmiI	GTMKAC	1 cut(s)	828
XmnI	GAANNNNTTC	2 cut(s)	351, 1550
XspI	CTAG	4 cut(s)	132, 876, 1449, 1580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.