Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0009990

Physical Location & Seq

Genomic Coordinates Forward (+)

7271196 .. 7275908

Gene Structure 4713 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022672

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGTCAATCTTATCATCCTCATCATCATTGTCAGTTGGGTATTGCGATGCCCAGAAGCACGCCAATGTCTCTTCCTCTTCCTCGTCTTTAATATGTTGTTCATTTCTCACCCCACTATCTCTTCCGCACCTCAAAAACAAGAAGAAGAAGAAGAAGAAGGCCTTCGGAGCTAACAACAACCTCTTTGATGACATTGCCATGGGCTTCCAAGCAAAAGCTAGGTATCCTATCAGCTTCCGCGCACAATATATGTTATCTACTACATCACATTCAACATCAACAGGAACAGCTAACTTGCTTGATATGGAGGAGCTCAGATTACCTTCTTTACAAGTTAATTCTGATTCTTTGATTGCAAATCGACCATGGACATACACGGGGCCATTCGGCCCTCCCACTGAGGCAAACTACGGGGCAGCTTTAGCTACTGAAACACTTCTTACAAGTGAAGAGGCTGTAATAGCAGCTGCTGCCGCTGAAGCTGTTACTCTTGCAAAAGCAGCTCTGAAGGTTGCAAAGGATGTGGCTTTGCTGGTTAGCAATAATCACTACACTAAAGCAGAAAGTTTATCTCCAGTTTCTCGTGGGACCAATGCCTTTCATATCAACTGGGCTCAGCATCTGGAAACTGAACAAACTCTTAGAATTGGAGATTCCATGGCATCTGAAACTGCACTGATGGAGGATCATTTCATTCAAATTGCCATAAAAGAGTCTGAAGATGTGAAGCCAGCAAATGAAGAATTTGAACTTCTGCAGGAGCAACTTTCCAACGGTATAGCTGCGAGATCAAGGCGCCAAACAGAAAGGAAGGCAAGAAGAGCCAGAGCAGCAGAAAAGGCTGCTGCCAGTGTTGTGTCCGTGAAGTCTGGTTCAACCAGCCGAAAAAAGCGTGCTTCTTTACAAGATGTAGACCATTCTGATCCATTGCGTTACTTGAGAACAACTACCCATACTTCTAGACTTCTTACTGCAACTGAAGAAATTGAACTATCAGAAGGAATACAGGAACTTCTAAAACTGGAAAAGCTCCAGGAGGATCTTGCACAAAGATGCGGCACTCAACCCACCTTTGCACAATGGGCTGCAGCAGCAGGAGTTGATCAGAAGACATTAAGGAAGCGGGTAAACTATGGTATTATGTGCAAAGACAAAATGATTAAGAGCAACATACGGCTTGTTATATCAATTGCAAAAAATTATCAGGGAGCTGGGATGAATCTTCAAGATCTCGTGCAGGAAGGATGTCGTGGCCTTGTAAGAGGTGCAGAAAAATTTGATGCTTCAAAGGGTTTTAAGTTCTCAACCTATGCTCACTGGTGGATTAAACAGGCTGTTCGAAAGTCTCTTTCTGATCAATCGAGGACAATTCGTTTACCTTTTCACATGGTGGAGGCAACTTATAGAGTGAGAGAGGCTAAAAAGCAATTGTATAGTGTAAACGGAAGACATCCTAATGATGAAGAAGTTGCAGAGGCAACAGGGCTATCGATGAAGAGGCTTGCTGCTGTCTTACTGACTCCAAAAGCTCCTAGATCGCTGGAGCAGAAAATTGGAATCAACCAGAATCTTAAACCTTCGGATGTAATTGCAGATCCTGACGCAGAAACAGCCGAAGACCTGTTGATGAAAAAGTTCATGAGACAGGATTTGGAGAAGGTACTGGATAGTCTCAATCCAAGAGAGAAGCAGGTGATCAGATGGAGGTTTGGAATGGAGGATGGGAGGATGAAGACATTGCAAGAGATAGGGGAGCTGATGGGTGTTAGTAGAGAGAGAATTAGACAAATTGAGTCATGTGCGTTCCGGAAGCTGAAGAACAAGAAAAGAACTAAACATTTGCAGCAGTATGTGCTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006399 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009639 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r1_2 Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

621

Amino Acids

69.12

Weight (kDa)

9.51

Isoelectric Point (pI)

45.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	386 - 456	3e-20	Sigma-70 region 2
Sigma70_r3	PF04539	465 - 540	3.3e-17	Sigma-70 region 3
Sigma70_r4	PF04545	554 - 606	5.4e-19	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08540
fragaria_vesca	FvH4_1g29160 FvH4_1g29160
malus_domestica	MD12G1111900.v1.1 MD14G1100900.v1.1
prunus_persica	Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1
pyrus_communis	pycom12g09170 pycom14g08810
rosa_chinensis	RchiOBHm_Chr3g0494351 RchiOBHm_Chr3g0494481
rosa_laevigata	RLG00000022672
rosa_multiflora	Rmu_sc0000152.1_g000008
rosa_roxburghii	Rroxscaffold_6G00391100
rosa_rugosa	Rorug03G0265600
rosa_samantha	Rh3BG350900 Rh3CG347600 Rh3DG350200
rosa_wichuraiana	Rw3G027560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1681
Acc36I	ACCTGC	1 cut(s)	1681
AccB1I	GGYRCC	1 cut(s)	795
AccI	GTMKAC	1 cut(s)	912
AccII	CGCG	1 cut(s)	240
AccIII	TCCGGA	1 cut(s)	1806
AciI	CCGC	5 cut(s)	125, 238, 474, 1056, 1123
AclWI	GGATC	4 cut(s)	693, 917, 1047, 1589
AcsI	RAATTY	2 cut(s)	743, 1274
AcuI	CTGAAG	5 cut(s)	498, 527, 738, 999, 1835
AcyI	GRCGYC	1 cut(s)	796
AdeI	CACNNNGTG	1 cut(s)	1390
AfaI	GTAC	1 cut(s)	1662
AgsI	TTSAA	7 cut(s)	273, 698, 749, 876, 989, 1226, 1287
AjnI	CCWGG	1 cut(s)	1032
Alw21I	GWGCWC	1 cut(s)	315
Alw26I	GTCTC	4 cut(s)	73, 1350, 1636, 1676
AlwI	GGATC	4 cut(s)	693, 917, 1047, 1589
AlwNI	CAGNNNCTG	3 cut(s)	470, 622, 1598
Aor13HI	TCCGGA	1 cut(s)	1806
AoxI	GGCC	4 cut(s)	159, 380, 388, 1252
ApoI	RAATTY	2 cut(s)	743, 1274
Asp700I	GAANNNNTTC	3 cut(s)	161, 435, 1634
AspLEI	GCGC	2 cut(s)	242, 798
AspS9I	GGNCC	3 cut(s)	380, 389, 588
AsuHPI	GGTGA	2 cut(s)	100, 1705
AsuII	TTCGAA	1 cut(s)	1339
AvaII	GGWCC	1 cut(s)	588
BanI	GGYRCC	1 cut(s)	795
BanII	GRGCYC	2 cut(s)	315, 616
BauI	CACGAG	2 cut(s)	582, 1232
BbsI	GAAGAC	4 cut(s)	1115, 1453, 1623, 1739
Bbv12I	GWGCWC	1 cut(s)	315
BccI	CCATC	4 cut(s)	673, 1695, 1715, 1753
BceAI	ACGGC	1 cut(s)	1190
BciT130I	CCWGG	1 cut(s)	1034
BciVI	GTATCC	1 cut(s)	234
BclI	TGATCA	3 cut(s)	1102, 1354, 1695
BcoDI	GTCTC	4 cut(s)	73, 1350, 1636, 1676
BfaI	CTAG	3 cut(s)	219, 960, 1533
BfmI	CTRYAG	2 cut(s)	755, 1086
BfoI	RGCGCY	1 cut(s)	799
BfuAI	ACCTGC	1 cut(s)	1681
BfuI	GTATCC	1 cut(s)	234
BglII	AGATCT	1 cut(s)	1228
BlpI	GCTNAGC	1 cut(s)	615
Bme1390I	CCNGG	1 cut(s)	1034
Bme18I	GGWCC	1 cut(s)	588
BmgT120I	GGNCC	3 cut(s)	380, 389, 588
BmiI	GGNNCC	3 cut(s)	381, 589, 797
BmrFI	CCNGG	1 cut(s)	1034
BmrI	ACTGGG	1 cut(s)	619
BmsI	GCATC	5 cut(s)	37, 628, 671, 1043, 1270
BmuI	ACTGGG	1 cut(s)	619
BpiI	GAAGAC	4 cut(s)	1115, 1453, 1623, 1739
BpmI	CTGGAG	3 cut(s)	558, 1016, 1562
Bpu1102I	GCTNAGC	1 cut(s)	615
Bpu14I	TTCGAA	1 cut(s)	1339
BpuEI	CTTGAG	1 cut(s)	958
Bsa29I	ATCGAT	1 cut(s)	1490
BsaHI	GRCGYC	1 cut(s)	796
BsaJI	CCNNGG	3 cut(s)	198, 365, 657
BsaWI	WCCGGW	1 cut(s)	1806
Bse1I	ACTGG	6 cut(s)	575, 614, 849, 1026, 1322, 1668
Bse3DI	GCAATG	3 cut(s)	192, 926, 1736
BseAI	TCCGGA	1 cut(s)	1806
BseBI	CCWGG	1 cut(s)	1034
BseCI	ATCGAT	1 cut(s)	1490
BseDI	CCNNGG	3 cut(s)	198, 365, 657
BseGI	GGATG	8 cut(s)	14, 526, 1221, 1250, 1450, 1588, 1726, 1734
BseMI	GCAATG	3 cut(s)	192, 926, 1736
BseMII	CTCAG	3 cut(s)	328, 390, 629
BseNI	ACTGG	6 cut(s)	575, 614, 849, 1026, 1322, 1668
BseRI	GAGGAG	1 cut(s)	323
BseYI	CCCAGC	1 cut(s)	1211
BsgI	GTGCAG	3 cut(s)	657, 1256, 1287
Bsh1236I	CGCG	1 cut(s)	240
BshFI	GGCC	4 cut(s)	161, 382, 390, 1254
BshNI	GGYRCC	1 cut(s)	795
BshVI	ATCGAT	1 cut(s)	1490
BsiHKAI	GWGCWC	1 cut(s)	315
BsiSI	CCGG	1 cut(s)	1807
BslFI	GGGAC	1 cut(s)	601
BsmAI	GTCTC	4 cut(s)	73, 1350, 1636, 1676
BsmFI	GGGAC	1 cut(s)	601
BsnI	GGCC	4 cut(s)	161, 382, 390, 1254
Bsp119I	TTCGAA	1 cut(s)	1339
Bsp1286I	GDGCHC	2 cut(s)	315, 616
Bsp13I	TCCGGA	1 cut(s)	1806
Bsp1720I	GCTNAGC	1 cut(s)	615
Bsp19I	CCATGG	3 cut(s)	198, 365, 657
BspACI	CCGC	5 cut(s)	125, 238, 474, 1056, 1123
BspANI	GGCC	4 cut(s)	161, 382, 390, 1254
BspCNI	CTCAG	3 cut(s)	327, 391, 628
BspDI	ATCGAT	1 cut(s)	1490
BspEI	TCCGGA	1 cut(s)	1806
BspFNI	CGCG	1 cut(s)	240
BspHI	TCATGA	1 cut(s)	1638
BspLI	GGNNCC	3 cut(s)	381, 589, 797
BspMAI	CTGCAG	2 cut(s)	759, 1090
BspMI	ACCTGC	1 cut(s)	1681
BspPI	GGATC	4 cut(s)	693, 917, 1047, 1589
BspQI	GCTCTTC	1 cut(s)	814
BspT104I	TTCGAA	1 cut(s)	1339
BspT107I	GGYRCC	1 cut(s)	795
BsrDI	GCAATG	3 cut(s)	192, 926, 1736
BsrI	ACTGG	6 cut(s)	575, 614, 849, 1026, 1322, 1668
BssECI	CCNNGG	3 cut(s)	198, 365, 657
BssNI	GRCGYC	1 cut(s)	796
BssSI	CACGAG	2 cut(s)	582, 1232
BssT1I	CCWWGG	3 cut(s)	198, 365, 657
Bst2BI	CACGAG	2 cut(s)	582, 1232
Bst2UI	CCWGG	1 cut(s)	1034
Bst4CI	ACNGT	1 cut(s)	776
Bst6I	CTCTTC	6 cut(s)	76, 82, 126, 444, 814, 1490
BstACI	GRCGYC	1 cut(s)	796
BstAPI	GCANNNNNTGC	2 cut(s)	470, 1852
BstBI	TTCGAA	1 cut(s)	1339
BstC8I	GCNNGC	4 cut(s)	60, 732, 894, 1503
BstDEI	CTNAG	4 cut(s)	314, 399, 615, 641
BstDSI	CCRYGG	3 cut(s)	198, 365, 657
BstF5I	GGATG	8 cut(s)	14, 526, 1221, 1250, 1450, 1588, 1726, 1734
BstFNI	CGCG	1 cut(s)	240
BstH2I	RGCGCY	1 cut(s)	799
BstHHI	GCGC	2 cut(s)	242, 798
BstMAI	GTCTC	4 cut(s)	73, 1350, 1636, 1676
BstNI	CCWGG	1 cut(s)	1034
BstSCI	CCNGG	1 cut(s)	1032
BstSFI	CTRYAG	2 cut(s)	755, 1086
BstUI	CGCG	1 cut(s)	240
BstV2I	GAAGAC	4 cut(s)	1115, 1453, 1623, 1739
BstX2I	RGATCY	3 cut(s)	1039, 1228, 1594
BstYI	RGATCY	3 cut(s)	1039, 1228, 1594
Bsu15I	ATCGAT	1 cut(s)	1490
BsuI	GTATCC	1 cut(s)	234
BsuRI	GGCC	4 cut(s)	161, 382, 390, 1254
BsuTUI	ATCGAT	1 cut(s)	1490
BtgI	CCRYGG	3 cut(s)	198, 365, 657
BtgZI	GCGATG	1 cut(s)	60
BtsCI	GGATG	8 cut(s)	14, 526, 1221, 1250, 1450, 1588, 1726, 1734
BtsIMutI	CAGTG	4 cut(s)	396, 674, 856, 1315
BveI	ACCTGC	1 cut(s)	1681
Cac8I	GCNNGC	4 cut(s)	60, 732, 894, 1503
CaiI	CAGNNNCTG	3 cut(s)	470, 622, 1598
CciI	TCATGA	1 cut(s)	1638
CfoI	GCGC	2 cut(s)	242, 798
Cfr13I	GGNCC	3 cut(s)	380, 389, 588
ClaI	ATCGAT	1 cut(s)	1490
CseI	GACGC	1 cut(s)	1610
Csp6I	GTAC	1 cut(s)	1661
CspCI	CAANNNNNGTGG	2 cut(s)	504, 539
CviAII	CATG	6 cut(s)	199, 366, 658, 1387, 1639, 1797
CviQI	GTAC	1 cut(s)	1661
DdeI	CTNAG	4 cut(s)	314, 399, 615, 641
DinI	GGCGCC	1 cut(s)	797
DraIII	CACNNNGTG	1 cut(s)	1390
Eam1104I	CTCTTC	6 cut(s)	76, 82, 126, 444, 814, 1490
EarI	CTCTTC	6 cut(s)	76, 82, 126, 444, 814, 1490
Ecl136II	GAGCTC	1 cut(s)	313
Eco130I	CCWWGG	3 cut(s)	198, 365, 657
Eco147I	AGGCCT	1 cut(s)	161
Eco24I	GRGCYC	2 cut(s)	315, 616
Eco47I	GGWCC	1 cut(s)	588
Eco53kI	GAGCTC	1 cut(s)	313
Eco57I	CTGAAG	5 cut(s)	498, 527, 738, 999, 1835
EcoICRI	GAGCTC	1 cut(s)	313
EcoRII	CCWGG	1 cut(s)	1032
EcoT14I	CCWWGG	3 cut(s)	198, 365, 657
EcoT38I	GRGCYC	2 cut(s)	315, 616
EgeI	GGCGCC	1 cut(s)	797
EheI	GGCGCC	1 cut(s)	797
ErhI	CCWWGG	3 cut(s)	198, 365, 657
FaeI	CATG	6 cut(s)	202, 369, 661, 1390, 1642, 1800
FalI	AAGNNNNNCTT	2 cut(s)	146, 178
FaqI	GGGAC	1 cut(s)	601
FatI	CATG	6 cut(s)	198, 365, 657, 1386, 1638, 1796
FauI	CCCGC	1 cut(s)	1116
FbaI	TGATCA	3 cut(s)	1102, 1354, 1695
FblI	GTMKAC	1 cut(s)	912
FokI	GGATG	7 cut(s)	533, 1228, 1257, 1437, 1595, 1733, 1741
FriOI	GRGCYC	2 cut(s)	315, 616
FspBI	CTAG	3 cut(s)	219, 960, 1533
GlaI	GCGC	2 cut(s)	241, 797
GsaI	CCCAGC	1 cut(s)	1215
GsuI	CTGGAG	3 cut(s)	558, 1016, 1562
HaeII	RGCGCY	1 cut(s)	799
HaeIII	GGCC	4 cut(s)	161, 382, 390, 1254
HapII	CCGG	1 cut(s)	1807
HgaI	GACGC	1 cut(s)	1610
HhaI	GCGC	2 cut(s)	242, 798
Hin1I	GRCGYC	1 cut(s)	796
Hin1II	CATG	6 cut(s)	202, 369, 661, 1390, 1642, 1800
Hin6I	GCGC	2 cut(s)	240, 796
HinP1I	GCGC	2 cut(s)	240, 796
HinfI	GANTC	8 cut(s)	344, 653, 713, 1219, 1519, 1557, 1567, 1793
HpaII	CCGG	1 cut(s)	1807
HphI	GGTGA	2 cut(s)	100, 1705
Hpy166II	GTNNAC	4 cut(s)	913, 1129, 1376, 1441
Hpy188III	TCNNGA	6 cut(s)	623, 960, 1226, 1598, 1639, 1807
Hpy8I	GTNNAC	4 cut(s)	913, 1129, 1376, 1441
HpyAV	CCTTC	9 cut(s)	151, 172, 333, 502, 805, 992, 1235, 1587, 1651
HpyCH4III	ACNGT	1 cut(s)	776
HpyF3I	CTNAG	4 cut(s)	314, 399, 615, 641
Hsp92I	GRCGYC	1 cut(s)	796
Hsp92II	CATG	6 cut(s)	202, 369, 661, 1390, 1642, 1800
HspAI	GCGC	2 cut(s)	240, 796
KasI	GGCGCC	1 cut(s)	795
Kpn2I	TCCGGA	1 cut(s)	1806
Ksp22I	TGATCA	3 cut(s)	1102, 1354, 1695
LguI	GCTCTTC	1 cut(s)	814
LmnI	GCTCC	8 cut(s)	167, 310, 760, 1035, 1208, 1534, 1543, 1753
LweI	GCATC	5 cut(s)	37, 628, 671, 1043, 1270
MaeI	CTAG	3 cut(s)	219, 960, 1533
MaeIII	GTNAC	2 cut(s)	484, 932
MfeI	CAATTG	2 cut(s)	1188, 1427
MflI	RGATCY	3 cut(s)	1039, 1228, 1594
MhlI	GDGCHC	2 cut(s)	315, 616
Mly113I	GGCGCC	1 cut(s)	796
MlyI	GAGTC	3 cut(s)	722, 1513, 1802
MmeI	TCCRAC	1 cut(s)	795
MroI	TCCGGA	1 cut(s)	1806
MroXI	GAANNNNTTC	3 cut(s)	161, 435, 1634
MseI	TTAA	7 cut(s)	89, 336, 1115, 1161, 1296, 1326, 1572
MslI	CAYNNNNRTG	4 cut(s)	63, 197, 1051, 1455
MspA1I	CMGCKG	2 cut(s)	467, 476
MspI	CCGG	1 cut(s)	1807
MspR9I	CCNGG	1 cut(s)	1034
MunI	CAATTG	2 cut(s)	1188, 1427
MvaI	CCWGG	1 cut(s)	1034
MvnI	CGCG	1 cut(s)	240
NarI	GGCGCC	1 cut(s)	796
NcoI	CCATGG	3 cut(s)	198, 365, 657
NlaIII	CATG	6 cut(s)	202, 369, 661, 1390, 1642, 1800
NlaIV	GGNNCC	3 cut(s)	381, 589, 797
NspV	TTCGAA	1 cut(s)	1339
PagI	TCATGA	1 cut(s)	1638
PaqCI	CACCTGC	1 cut(s)	1681
PceI	AGGCCT	1 cut(s)	161
PciSI	GCTCTTC	1 cut(s)	814
PdmI	GAANNNNTTC	3 cut(s)	161, 435, 1634
PfeI	GAWTC	5 cut(s)	344, 653, 1219, 1557, 1567
PfoI	TCCNGGA	1 cut(s)	1032
PleI	GAGTC	3 cut(s)	721, 1513, 1801
PluTI	GGCGCC	1 cut(s)	799
PpsI	GAGTC	3 cut(s)	721, 1513, 1801
Psp124BI	GAGCTC	1 cut(s)	315
Psp6I	CCWGG	1 cut(s)	1032
PspFI	CCCAGC	1 cut(s)	1211
PspGI	CCWGG	1 cut(s)	1032
PspN4I	GGNNCC	3 cut(s)	381, 589, 797
PspPI	GGNCC	3 cut(s)	380, 389, 588
PstI	CTGCAG	2 cut(s)	759, 1090
PstNI	CAGNNNCTG	3 cut(s)	470, 622, 1598
PsuI	RGATCY	3 cut(s)	1039, 1228, 1594
PvuII	CAGCTG	1 cut(s)	467
RsaI	GTAC	1 cut(s)	1662
RsaNI	GTAC	1 cut(s)	1661
RseI	CAYNNNNRTG	4 cut(s)	63, 197, 1051, 1455
SacI	GAGCTC	1 cut(s)	315
SapI	GCTCTTC	1 cut(s)	814
SaqAI	TTAA	7 cut(s)	89, 336, 1115, 1161, 1296, 1326, 1572
Sau96I	GGNCC	3 cut(s)	380, 389, 588
SchI	GAGTC	3 cut(s)	722, 1513, 1802
ScrFI	CCNGG	1 cut(s)	1034
SduI	GDGCHC	2 cut(s)	315, 616
SfaNI	GCATC	5 cut(s)	37, 628, 671, 1043, 1270
SfcI	CTRYAG	2 cut(s)	755, 1086
SfoI	GGCGCC	1 cut(s)	797
SfuI	TTCGAA	1 cut(s)	1339
SinI	GGWCC	1 cut(s)	588
SmiMI	CAYNNNNRTG	4 cut(s)	63, 197, 1051, 1455
SmlI	CTYRAG	1 cut(s)	937
SmoI	CTYRAG	1 cut(s)	937
SseBI	AGGCCT	1 cut(s)	161
SsiI	CCGC	5 cut(s)	125, 238, 474, 1056, 1123
SspDI	GGCGCC	1 cut(s)	795
SspMI	CTAG	3 cut(s)	219, 960, 1533
SstI	GAGCTC	1 cut(s)	315
StuI	AGGCCT	1 cut(s)	161
StyD4I	CCNGG	1 cut(s)	1032
StyI	CCWWGG	3 cut(s)	198, 365, 657
TaaI	ACNGT	1 cut(s)	776
TaqI	TCGA	4 cut(s)	361, 1339, 1361, 1490
TauI	GCSGC	2 cut(s)	476, 1059
TfiI	GAWTC	5 cut(s)	344, 653, 1219, 1557, 1567
Tru1I	TTAA	7 cut(s)	89, 336, 1115, 1161, 1296, 1326, 1572
Tru9I	TTAA	7 cut(s)	89, 336, 1115, 1161, 1296, 1326, 1572
TscAI	CASTG	4 cut(s)	403, 681, 856, 1322
TspGWI	ACGGA	2 cut(s)	850, 1458
TspRI	CASTG	4 cut(s)	403, 681, 856, 1322
VpaK11BI	GGWCC	1 cut(s)	588
XapI	RAATTY	2 cut(s)	743, 1274
XbaI	TCTAGA	1 cut(s)	959
XmiI	GTMKAC	1 cut(s)	912
XmnI	GAANNNNTTC	3 cut(s)	161, 435, 1634
XspI	CTAG	3 cut(s)	219, 960, 1533

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.