Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0009990

Physical Location & Seq

Genomic Coordinates Reverse (-)

40837453 .. 40841997

Gene Structure 4545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG350900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGTCGTCAATCTCATCATCATTGTCAGTTGGGTACTGCGATGCCCAGAAACACGCCAATGTCTCTTCCTCTTCCTCGTCTTTAATATGTTGTTCATTTCTCACCCCACTATCTCTTCCGCACCCCAAAAACAAGAACAAGAAGAAGGCCTCCGGAGCTAACCACCTCTTTGATGACATTGCCATGGGCTTCCAAGCAAAAGCTAGGTATCCTATCAGCTTCCGCGCCCAATATATGCTATCTACTACAGCACATTCAACATCAACAGGAACAGCTAACTTGCTTGATATGGAGGAGCTCAGATTACCTTCTTTACAAGTTCATTCTGATTCTTTGATTGCAAATCGACCATGGACATACACGGGGGCAATCGGCCCTCCCACTGAGGCAAACTATGGGGCAGCTTTAGCCACTGAAACACTTCTTACAAGTGAAGAGGCTGTAATAGCAGCTGCTGCCGCTGAAGCTGTTACTCTTGCAAAAGCGGCTCTGAAGGTTGCAAAGGATGTGGCTTTGCTGGTTAGCAATAATCACTACACTAAAGCAGAAAGTTCATCTCCAGTTTCTCGTGGGACCGATGCCTTTCATATCAACTGGGCTCAGCATCTGGAAACTGAACAAACTCTTAGAATTGGAGATTCCATGGCATCTGAAACTGCACTGATGGAGGATCATTTCATTCAAATTGCCATAAAAGAGTCTGAAGATGTGGAGCCAGCAAATGAAGAATTTGAACTTCTGCAGGAGCAACTTTCCAATGGTATAGCTGCGAGATCAAGGCGCCAAACGGAAAGGAAGGCAAGAAGAGCCAGAGCAGCAGAAAAGGCTGCTGCCAGTGTTGTGTCCGTGAAGTCTGGTTCAACCAGCCGAAAAAAGCGTGCTTCTTTACAAGACGTAGACCATTCTGATCCATTGCGTTACTTGAGAACAACTACCCATACTTCTAGACTTCTTACTGCAACTGAAGAAATTGAACTATCAGAAGGAATACAGGAACTTCTAAAACTGGAAAAGCTCCAGGAGGATCTTGCACAAAGATGTGGCACTCAGCCCACCTTTGCACAATGGGCTGCAGCAGCAGGAGTTGATCAGAAGACATTAAGGAAGCGGGTAAACTATGGTATCATGTGCAAAGACAAAATGATTAAGAGCAATATACGGCTTGTTATATCAATTGCAAAAAATTATCAAGGAGCTGGGATGAATCTTCAAGATCTCGTGCAGGAAGGATGTCGTGGCCTTGTAAGAGGTGCAGAAAAATTTGATGCTTCAAAGGGTTTTAAGTTCTCAACCTATGCTCACTGGTGGATTAAACAGGCTGTTCGAAAGTCTCTTTCTGATCAATCGAGGACAATTCGTTTACCATTTCACATGGTGGAGGCAACTTACAGAGTGAGAGAGGCTAAAAAGCAATTGTATAGTGTAAACGGAAGACATCCTAATGATGAAGAAGTTGCAGAGGCAACAGGGCTATCGATGAAGAGGCTTGCTGCTGTCTTACTGACTCCAAAAGCTCCTAGATCGCTGGAGCAGAAAATTGGAATCAACCAGAATCTTAAACCTTCGGATGTAATTGCAGATCCTGACGCAGAAACAGCTGAAGACCTGTTGATGAAAAAATTCATGAGACAGGATTTGGAGAAGGTACTGGATAGTCTCAATCCAAGAGAGAAGCAGGTGATCAGATGGAGGTTTGGAATGGAGGATGGGAGGATGAAGACATTGCAAGAGATAGGGGAGCTGATGGGTGTTAGTAGAGAGAGAATTAGACAAATTGAGTCATGTGCGTTCCGAAAGCTGAAGAACAAGAAAAGAACTAAACATTTGCAGCAGTATGTGCTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006399 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009639 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r1_2 Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

615

Amino Acids

68.41

Weight (kDa)

9.32

Isoelectric Point (pI)

46.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	381 - 451	2.9e-20	Sigma-70 region 2
Sigma70_r3	PF04539	460 - 535	3.3e-17	Sigma-70 region 3
Sigma70_r4	PF04545	549 - 601	5.3e-19	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08540
fragaria_vesca	FvH4_1g29160 FvH4_1g29160
malus_domestica	MD12G1111900.v1.1 MD14G1100900.v1.1
prunus_persica	Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1
pyrus_communis	pycom12g09170 pycom14g08810
rosa_chinensis	RchiOBHm_Chr3g0494351 RchiOBHm_Chr3g0494481
rosa_laevigata	RLG00000022672
rosa_multiflora	Rmu_sc0000152.1_g000008
rosa_roxburghii	Rroxscaffold_6G00391100
rosa_rugosa	Rorug03G0265600
rosa_samantha	Rh3BG350900 Rh3CG347600 Rh3DG350200
rosa_wichuraiana	Rw3G027560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1666
Acc36I	ACCTGC	1 cut(s)	1666
AccB1I	GGYRCC	1 cut(s)	780
AccI	GTMKAC	1 cut(s)	897
AccII	CGCG	1 cut(s)	225
AccIII	TCCGGA	1 cut(s)	152
AciI	CCGC	5 cut(s)	119, 223, 459, 485, 1108
AclWI	GGATC	4 cut(s)	678, 902, 1032, 1574
AcsI	RAATTY	3 cut(s)	728, 1259, 1619
AcuI	CTGAAG	6 cut(s)	483, 512, 723, 984, 1620, 1820
AcyI	GRCGYC	1 cut(s)	781
AdeI	CACNNNGTG	1 cut(s)	1375
AfaI	GTAC	2 cut(s)	35, 1647
AgsI	TTSAA	7 cut(s)	258, 683, 734, 861, 974, 1211, 1272
AjnI	CCWGG	1 cut(s)	1017
Alw21I	GWGCWC	1 cut(s)	300
Alw26I	GTCTC	4 cut(s)	67, 1335, 1621, 1661
AlwI	GGATC	4 cut(s)	678, 902, 1032, 1574
AlwNI	CAGNNNCTG	3 cut(s)	455, 607, 1583
Aor13HI	TCCGGA	1 cut(s)	152
AoxI	GGCC	3 cut(s)	147, 373, 1237
ApoI	RAATTY	3 cut(s)	728, 1259, 1619
Asp700I	GAANNNNTTC	2 cut(s)	420, 1619
AspLEI	GCGC	2 cut(s)	227, 783
AspS9I	GGNCC	2 cut(s)	374, 573
AsuHPI	GGTGA	2 cut(s)	94, 1690
AsuII	TTCGAA	1 cut(s)	1324
AvaII	GGWCC	1 cut(s)	573
BaeI	ACNNNNGTAYC	2 cut(s)	1105, 1138
BanI	GGYRCC	1 cut(s)	780
BanII	GRGCYC	2 cut(s)	300, 601
BauI	CACGAG	2 cut(s)	567, 1217
BbsI	GAAGAC	4 cut(s)	1100, 1438, 1608, 1724
Bbv12I	GWGCWC	1 cut(s)	300
BccI	CCATC	4 cut(s)	658, 1680, 1700, 1738
BceAI	ACGGC	1 cut(s)	1175
BciT130I	CCWGG	1 cut(s)	1019
BciVI	GTATCC	1 cut(s)	219
BclI	TGATCA	3 cut(s)	1087, 1339, 1680
BcoDI	GTCTC	4 cut(s)	67, 1335, 1621, 1661
BfaI	CTAG	3 cut(s)	204, 945, 1518
BfmI	CTRYAG	3 cut(s)	246, 740, 1071
BfoI	RGCGCY	1 cut(s)	784
BfuAI	ACCTGC	1 cut(s)	1666
BfuI	GTATCC	1 cut(s)	219
BglII	AGATCT	1 cut(s)	1213
BlpI	GCTNAGC	1 cut(s)	600
Bme1390I	CCNGG	1 cut(s)	1019
Bme18I	GGWCC	1 cut(s)	573
BmgT120I	GGNCC	2 cut(s)	374, 573
BmiI	GGNNCC	3 cut(s)	574, 714, 782
BmrFI	CCNGG	1 cut(s)	1019
BmrI	ACTGGG	1 cut(s)	604
BmsI	GCATC	5 cut(s)	31, 568, 613, 656, 1255
BmuI	ACTGGG	1 cut(s)	604
BpiI	GAAGAC	4 cut(s)	1100, 1438, 1608, 1724
BpmI	CTGGAG	3 cut(s)	543, 1001, 1547
Bpu1102I	GCTNAGC	1 cut(s)	600
Bpu14I	TTCGAA	1 cut(s)	1324
BpuEI	CTTGAG	1 cut(s)	943
Bsa29I	ATCGAT	1 cut(s)	1475
BsaHI	GRCGYC	1 cut(s)	781
BsaJI	CCNNGG	3 cut(s)	183, 350, 642
BsaWI	WCCGGW	1 cut(s)	152
Bse1I	ACTGG	6 cut(s)	560, 599, 834, 1011, 1307, 1653
Bse3DI	GCAATG	3 cut(s)	177, 911, 1721
BseAI	TCCGGA	1 cut(s)	152
BseBI	CCWGG	1 cut(s)	1019
BseCI	ATCGAT	1 cut(s)	1475
BseDI	CCNNGG	3 cut(s)	183, 350, 642
BseGI	GGATG	7 cut(s)	511, 1206, 1235, 1435, 1573, 1711, 1719
BseMI	GCAATG	3 cut(s)	177, 911, 1721
BseMII	CTCAG	4 cut(s)	313, 375, 614, 1061
BseNI	ACTGG	6 cut(s)	560, 599, 834, 1011, 1307, 1653
BseRI	GAGGAG	1 cut(s)	308
BseYI	CCCAGC	1 cut(s)	1196
BsgI	GTGCAG	3 cut(s)	642, 1241, 1272
Bsh1236I	CGCG	1 cut(s)	225
BshFI	GGCC	3 cut(s)	149, 375, 1239
BshNI	GGYRCC	1 cut(s)	780
BshVI	ATCGAT	1 cut(s)	1475
BsiHKAI	GWGCWC	1 cut(s)	300
BsiSI	CCGG	1 cut(s)	153
BslFI	GGGAC	1 cut(s)	586
BsmAI	GTCTC	4 cut(s)	67, 1335, 1621, 1661
BsmFI	GGGAC	1 cut(s)	586
BsnI	GGCC	3 cut(s)	149, 375, 1239
Bsp119I	TTCGAA	1 cut(s)	1324
Bsp1286I	GDGCHC	2 cut(s)	300, 601
Bsp13I	TCCGGA	1 cut(s)	152
Bsp1720I	GCTNAGC	1 cut(s)	600
Bsp19I	CCATGG	3 cut(s)	183, 350, 642
BspACI	CCGC	5 cut(s)	119, 223, 459, 485, 1108
BspANI	GGCC	3 cut(s)	149, 375, 1239
BspCNI	CTCAG	4 cut(s)	312, 376, 613, 1060
BspDI	ATCGAT	1 cut(s)	1475
BspEI	TCCGGA	1 cut(s)	152
BspFNI	CGCG	1 cut(s)	225
BspHI	TCATGA	1 cut(s)	1623
BspLI	GGNNCC	3 cut(s)	574, 714, 782
BspMAI	CTGCAG	2 cut(s)	744, 1075
BspMI	ACCTGC	1 cut(s)	1666
BspPI	GGATC	4 cut(s)	678, 902, 1032, 1574
BspQI	GCTCTTC	1 cut(s)	799
BspT104I	TTCGAA	1 cut(s)	1324
BspT107I	GGYRCC	1 cut(s)	780
BsrDI	GCAATG	3 cut(s)	177, 911, 1721
BsrI	ACTGG	6 cut(s)	560, 599, 834, 1011, 1307, 1653
BssECI	CCNNGG	3 cut(s)	183, 350, 642
BssNI	GRCGYC	1 cut(s)	781
BssSI	CACGAG	2 cut(s)	567, 1217
BssT1I	CCWWGG	3 cut(s)	183, 350, 642
Bst2BI	CACGAG	2 cut(s)	567, 1217
Bst2UI	CCWGG	1 cut(s)	1019
Bst6I	CTCTTC	6 cut(s)	70, 76, 120, 429, 799, 1475
BstACI	GRCGYC	1 cut(s)	781
BstAPI	GCANNNNNTGC	2 cut(s)	455, 1837
BstBI	TTCGAA	1 cut(s)	1324
BstC8I	GCNNGC	3 cut(s)	717, 879, 1488
BstDEI	CTNAG	5 cut(s)	299, 384, 600, 626, 1047
BstDSI	CCRYGG	3 cut(s)	183, 350, 642
BstF5I	GGATG	7 cut(s)	511, 1206, 1235, 1435, 1573, 1711, 1719
BstFNI	CGCG	1 cut(s)	225
BstH2I	RGCGCY	1 cut(s)	784
BstHHI	GCGC	2 cut(s)	227, 783
BstMAI	GTCTC	4 cut(s)	67, 1335, 1621, 1661
BstNI	CCWGG	1 cut(s)	1019
BstSCI	CCNGG	1 cut(s)	1017
BstSFI	CTRYAG	3 cut(s)	246, 740, 1071
BstUI	CGCG	1 cut(s)	225
BstV2I	GAAGAC	4 cut(s)	1100, 1438, 1608, 1724
BstX2I	RGATCY	3 cut(s)	1024, 1213, 1579
BstYI	RGATCY	3 cut(s)	1024, 1213, 1579
Bsu15I	ATCGAT	1 cut(s)	1475
BsuI	GTATCC	1 cut(s)	219
BsuRI	GGCC	3 cut(s)	149, 375, 1239
BsuTUI	ATCGAT	1 cut(s)	1475
BtgI	CCRYGG	3 cut(s)	183, 350, 642
BtgZI	GCGATG	1 cut(s)	54
BtsCI	GGATG	7 cut(s)	511, 1206, 1235, 1435, 1573, 1711, 1719
BtsIMutI	CAGTG	5 cut(s)	381, 411, 659, 841, 1300
BveI	ACCTGC	1 cut(s)	1666
Cac8I	GCNNGC	3 cut(s)	717, 879, 1488
CaiI	CAGNNNCTG	3 cut(s)	455, 607, 1583
CciI	TCATGA	1 cut(s)	1623
CfoI	GCGC	2 cut(s)	227, 783
Cfr13I	GGNCC	2 cut(s)	374, 573
ClaI	ATCGAT	1 cut(s)	1475
CseI	GACGC	1 cut(s)	1595
Csp6I	GTAC	2 cut(s)	34, 1646
CspCI	CAANNNNNGTGG	2 cut(s)	489, 524
CviAII	CATG	7 cut(s)	184, 351, 643, 1126, 1372, 1624, 1782
CviQI	GTAC	2 cut(s)	34, 1646
DdeI	CTNAG	5 cut(s)	299, 384, 600, 626, 1047
DinI	GGCGCC	1 cut(s)	782
DraIII	CACNNNGTG	1 cut(s)	1375
Eam1104I	CTCTTC	6 cut(s)	70, 76, 120, 429, 799, 1475
EarI	CTCTTC	6 cut(s)	70, 76, 120, 429, 799, 1475
Ecl136II	GAGCTC	1 cut(s)	298
Eco130I	CCWWGG	3 cut(s)	183, 350, 642
Eco147I	AGGCCT	1 cut(s)	149
Eco24I	GRGCYC	2 cut(s)	300, 601
Eco47I	GGWCC	1 cut(s)	573
Eco53kI	GAGCTC	1 cut(s)	298
Eco57I	CTGAAG	6 cut(s)	483, 512, 723, 984, 1620, 1820
EcoICRI	GAGCTC	1 cut(s)	298
EcoRII	CCWGG	1 cut(s)	1017
EcoT14I	CCWWGG	3 cut(s)	183, 350, 642
EcoT38I	GRGCYC	2 cut(s)	300, 601
EgeI	GGCGCC	1 cut(s)	782
EheI	GGCGCC	1 cut(s)	782
ErhI	CCWWGG	3 cut(s)	183, 350, 642
FaeI	CATG	7 cut(s)	187, 354, 646, 1129, 1375, 1627, 1785
FaqI	GGGAC	1 cut(s)	586
FatI	CATG	7 cut(s)	183, 350, 642, 1125, 1371, 1623, 1781
FauI	CCCGC	1 cut(s)	1101
FbaI	TGATCA	3 cut(s)	1087, 1339, 1680
FblI	GTMKAC	1 cut(s)	897
FokI	GGATG	7 cut(s)	518, 1213, 1242, 1422, 1580, 1718, 1726
FriOI	GRGCYC	2 cut(s)	300, 601
FspBI	CTAG	3 cut(s)	204, 945, 1518
GlaI	GCGC	2 cut(s)	226, 782
GsaI	CCCAGC	1 cut(s)	1200
GsuI	CTGGAG	3 cut(s)	543, 1001, 1547
HaeII	RGCGCY	1 cut(s)	784
HaeIII	GGCC	3 cut(s)	149, 375, 1239
HapII	CCGG	1 cut(s)	153
HgaI	GACGC	1 cut(s)	1595
HhaI	GCGC	2 cut(s)	227, 783
Hin1I	GRCGYC	1 cut(s)	781
Hin1II	CATG	7 cut(s)	187, 354, 646, 1129, 1375, 1627, 1785
Hin6I	GCGC	2 cut(s)	225, 781
HinP1I	GCGC	2 cut(s)	225, 781
HinfI	GANTC	8 cut(s)	329, 638, 698, 1204, 1504, 1542, 1552, 1778
HpaII	CCGG	1 cut(s)	153
HphI	GGTGA	2 cut(s)	94, 1690
Hpy166II	GTNNAC	4 cut(s)	898, 1114, 1361, 1426
Hpy188III	TCNNGA	6 cut(s)	153, 608, 945, 1211, 1583, 1624
Hpy8I	GTNNAC	4 cut(s)	898, 1114, 1361, 1426
HpyAV	CCTTC	8 cut(s)	139, 318, 487, 790, 977, 1220, 1572, 1636
HpyCH4IV	ACGT	1 cut(s)	894
HpyF3I	CTNAG	5 cut(s)	299, 384, 600, 626, 1047
HpySE526I	ACGT	1 cut(s)	894
Hsp92I	GRCGYC	1 cut(s)	781
Hsp92II	CATG	7 cut(s)	187, 354, 646, 1129, 1375, 1627, 1785
HspAI	GCGC	2 cut(s)	225, 781
KasI	GGCGCC	1 cut(s)	780
Kpn2I	TCCGGA	1 cut(s)	152
Ksp22I	TGATCA	3 cut(s)	1087, 1339, 1680
LguI	GCTCTTC	1 cut(s)	799
LmnI	GCTCC	9 cut(s)	155, 295, 712, 745, 1020, 1193, 1519, 1528, 1738
LweI	GCATC	5 cut(s)	31, 568, 613, 656, 1255
MaeI	CTAG	3 cut(s)	204, 945, 1518
MaeII	ACGT	1 cut(s)	894
MaeIII	GTNAC	2 cut(s)	469, 917
MfeI	CAATTG	2 cut(s)	1173, 1412
MflI	RGATCY	3 cut(s)	1024, 1213, 1579
MhlI	GDGCHC	2 cut(s)	300, 601
Mly113I	GGCGCC	1 cut(s)	781
MlyI	GAGTC	3 cut(s)	707, 1498, 1787
MroI	TCCGGA	1 cut(s)	152
MroXI	GAANNNNTTC	2 cut(s)	420, 1619
MseI	TTAA	6 cut(s)	83, 1100, 1146, 1281, 1311, 1557
MslI	CAYNNNNRTG	4 cut(s)	57, 182, 1036, 1440
MspA1I	CMGCKG	3 cut(s)	452, 461, 1598
MspI	CCGG	1 cut(s)	153
MspR9I	CCNGG	1 cut(s)	1019
MunI	CAATTG	2 cut(s)	1173, 1412
MvaI	CCWGG	1 cut(s)	1019
MvnI	CGCG	1 cut(s)	225
NarI	GGCGCC	1 cut(s)	781
NcoI	CCATGG	3 cut(s)	183, 350, 642
NlaIII	CATG	7 cut(s)	187, 354, 646, 1129, 1375, 1627, 1785
NlaIV	GGNNCC	3 cut(s)	574, 714, 782
NspV	TTCGAA	1 cut(s)	1324
PagI	TCATGA	1 cut(s)	1623
PaqCI	CACCTGC	1 cut(s)	1666
PceI	AGGCCT	1 cut(s)	149
PciSI	GCTCTTC	1 cut(s)	799
PdmI	GAANNNNTTC	2 cut(s)	420, 1619
PfeI	GAWTC	5 cut(s)	329, 638, 1204, 1542, 1552
PfoI	TCCNGGA	1 cut(s)	1017
PleI	GAGTC	3 cut(s)	706, 1498, 1786
PluTI	GGCGCC	1 cut(s)	784
PpsI	GAGTC	3 cut(s)	706, 1498, 1786
Psp124BI	GAGCTC	1 cut(s)	300
Psp6I	CCWGG	1 cut(s)	1017
PspFI	CCCAGC	1 cut(s)	1196
PspGI	CCWGG	1 cut(s)	1017
PspN4I	GGNNCC	3 cut(s)	574, 714, 782
PspPI	GGNCC	2 cut(s)	374, 573
PstI	CTGCAG	2 cut(s)	744, 1075
PstNI	CAGNNNCTG	3 cut(s)	455, 607, 1583
PsuI	RGATCY	3 cut(s)	1024, 1213, 1579
PvuII	CAGCTG	2 cut(s)	452, 1598
RsaI	GTAC	2 cut(s)	35, 1647
RsaNI	GTAC	2 cut(s)	34, 1646
RseI	CAYNNNNRTG	4 cut(s)	57, 182, 1036, 1440
SacI	GAGCTC	1 cut(s)	300
SapI	GCTCTTC	1 cut(s)	799
SaqAI	TTAA	6 cut(s)	83, 1100, 1146, 1281, 1311, 1557
Sau96I	GGNCC	2 cut(s)	374, 573
SchI	GAGTC	3 cut(s)	707, 1498, 1787
ScrFI	CCNGG	1 cut(s)	1019
SduI	GDGCHC	2 cut(s)	300, 601
SfaNI	GCATC	5 cut(s)	31, 568, 613, 656, 1255
SfcI	CTRYAG	3 cut(s)	246, 740, 1071
SfoI	GGCGCC	1 cut(s)	782
SfuI	TTCGAA	1 cut(s)	1324
SinI	GGWCC	1 cut(s)	573
SmiMI	CAYNNNNRTG	4 cut(s)	57, 182, 1036, 1440
SmlI	CTYRAG	1 cut(s)	922
SmoI	CTYRAG	1 cut(s)	922
SseBI	AGGCCT	1 cut(s)	149
SsiI	CCGC	5 cut(s)	119, 223, 459, 485, 1108
SspDI	GGCGCC	1 cut(s)	780
SspMI	CTAG	3 cut(s)	204, 945, 1518
SstI	GAGCTC	1 cut(s)	300
StuI	AGGCCT	1 cut(s)	149
StyD4I	CCNGG	1 cut(s)	1017
StyI	CCWWGG	3 cut(s)	183, 350, 642
TaiI	ACGT	1 cut(s)	897
TaqI	TCGA	4 cut(s)	346, 1324, 1346, 1475
TaqII	GACCGA	1 cut(s)	590
TauI	GCSGC	2 cut(s)	461, 488
TfiI	GAWTC	5 cut(s)	329, 638, 1204, 1542, 1552
Tru1I	TTAA	6 cut(s)	83, 1100, 1146, 1281, 1311, 1557
Tru9I	TTAA	6 cut(s)	83, 1100, 1146, 1281, 1311, 1557
TscAI	CASTG	5 cut(s)	388, 418, 666, 841, 1307
TspGWI	ACGGA	3 cut(s)	803, 835, 1443
TspRI	CASTG	5 cut(s)	388, 418, 666, 841, 1307
VpaK11BI	GGWCC	1 cut(s)	573
XapI	RAATTY	3 cut(s)	728, 1259, 1619
XbaI	TCTAGA	1 cut(s)	944
XmiI	GTMKAC	1 cut(s)	897
XmnI	GAANNNNTTC	2 cut(s)	420, 1619
XspI	CTAG	3 cut(s)	204, 945, 1518

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.