Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0009990

Physical Location & Seq

Genomic Coordinates Reverse (-)

41587843 .. 41592065

Gene Structure 4223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG350200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGTCAATCTTATCATCCTCATCATCATTGTCAGTTGGGTACTGCGATGCCCAGAAACACGCCAATAATGTCTCTTCCTCGTCTTTAATATGTTGTTCATTTCTCACCCCACTATCTGTTCCGCACCCCAAAAACAAGAAGAACAAGAAGAAGAAGAAGGCCTCCGGAGCTAACAACCTCTTTGATGACATTGCCATGGGCTTCCAAGCAAAAGCTAGGTATCCTATCAGCTTCCGCGCCCAATATATGTTATCTACTACAGCACATTCAACATCAACAGGAACAGCTAACTTGCTTGATATGGAGGAGCTCAGATTACCTTCTTTACAAGTTAATTCTGATTCTCTGATTGCAAATCGACCATGGACATACACGGGGGCAATCGGCCCTCCCACTCAGGCAAACTATGGGGCAGCTTTAGCCACTGAAACACTTCTTACAAGTGAAGAGGCTGTAATAGCAGCTGCTGCCGCTGAAGCTGTTACTCTTGCAAAAGCGGCTCTGAAGGTTGCAAAGGATGTGGCTTTGCTGGTTAGCAATAATCACTACACTAAAGCAGAAAGTTCATCTCCAGTTTCTCGTGGGACCGATGCCTTTCACATCAACTGGGCTCAGCATCTGGAAACTGAACAAACTCTTAGAATTGGAAATTCCATGGCATCTGAAACTGCACTGATGGAGGATCATTTCATTCAAATTGCCATAAAAGAGTCTGAAGATGTGGAGCCAGCAAATGAAGAATTTGAACTTCTGCAGGAGCAACTTTCCAACGGTATAGCTGCGAGATCAAGGCGCCAAATGGAAAGGAAGGCAAGAAGAGCCAGAGCAGCAGAAAAGGCTGCTGCCAGTGTTGTGTCCGTGAAGTCTGGTTCAACCAGCCGAAAAAAGCGTGCTTCTTTACAAGACGTAGACCATTCTGATCCATTGCGTTACTTGAGAACAACTACCCATACTTCTAGACTTCTTACTGCAACTGAAGAAATTGAACTATCAGAAGGAATACAGGAACTTCTAAAACTGGAAAAGCTCCAGGAGGATCTTGCACAAAGATGCGGCACTCAGCCCACCTTTGCACAATGGGCTGCAGCAGCAGGAGTTGATCAGAAGACATTAAGAAAGCGGGTAAACTATGGTATCATGTGCAAAGACAAAATGATTAAGAGCAACATACGGCTTGTTATATCAATTGCAAAAAATTATCAGGGAGCTGGGATGAATCTTCAAGATCTCGTGCAGGAAGGATGTCGTGGCCTTGTAAGAGGTGCAGAAAAATTTGATGCTTCAAAGGGTTTTAAGTTCTCAACCTATGCTCACTGGTGGATTAAACAGGCTGTTCGAAAGTCTCTTTCTGATCAATCGAGGACAATTCGTTTACCATTTCACATGGTGGAGGCAACTTACAGAGTGAGAGAGGCTAAAAAGCAATTGTATAGTGTAAACGGAAGACATCCTAATGATGAAGAAGTTGCAGAGGCAACAGGGCTATCGATGAAGAGGCTTGCTGCTGTCTTACTGACTCCAAAAGCTCCTAGATCGCTGGAGCAGAAAATTGGAATCAACCAGAATCTTAAACCTTCGGATGTAATTGCAGATCCTGACGCAGAAACAGCTGAAGACCTGTTGATGAAAAAATTCATGAGACAGGATTTGGAGAAGGTACTAGATAGTCTCAATCCAAGAGAGAAGCAGGTGATCAGATGGAGGTTTGGAATGGAGGATGGGAGGATGAAGACATTGCAAGAGATAGGGGAGCTGATGGGTGTTAGTAGAGAGAGAATTAGACAAATTGAGTCATGTGCGTTCCGAAAGCTGAAGAACAAGAAAAGAACTAAACATTTGCAGCAGTATGTGCTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006399 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009639 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r1_2 Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

619

Amino Acids

68.9

Weight (kDa)

9.49

Isoelectric Point (pI)

44.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	385 - 455	3e-20	Sigma-70 region 2
Sigma70_r3	PF04539	464 - 539	3.3e-17	Sigma-70 region 3
Sigma70_r4	PF04545	553 - 605	5.4e-19	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08540
fragaria_vesca	FvH4_1g29160 FvH4_1g29160
malus_domestica	MD12G1111900.v1.1 MD14G1100900.v1.1
prunus_persica	Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1
pyrus_communis	pycom12g09170 pycom14g08810
rosa_chinensis	RchiOBHm_Chr3g0494351 RchiOBHm_Chr3g0494481
rosa_laevigata	RLG00000022672
rosa_multiflora	Rmu_sc0000152.1_g000008
rosa_roxburghii	Rroxscaffold_6G00391100
rosa_rugosa	Rorug03G0265600
rosa_samantha	Rh3BG350900 Rh3CG347600 Rh3DG350200
rosa_wichuraiana	Rw3G027560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1678
Acc36I	ACCTGC	1 cut(s)	1678
AccB1I	GGYRCC	1 cut(s)	792
AccI	GTMKAC	1 cut(s)	909
AccII	CGCG	1 cut(s)	237
AccIII	TCCGGA	1 cut(s)	164
AciI	CCGC	6 cut(s)	122, 235, 471, 497, 1053, 1120
AclWI	GGATC	4 cut(s)	690, 914, 1044, 1586
AcsI	RAATTY	4 cut(s)	649, 740, 1271, 1631
AcuI	CTGAAG	6 cut(s)	495, 524, 735, 996, 1632, 1832
AcyI	GRCGYC	1 cut(s)	793
AdeI	CACNNNGTG	1 cut(s)	1387
AfaI	GTAC	2 cut(s)	41, 1659
AgsI	TTSAA	7 cut(s)	270, 695, 746, 873, 986, 1223, 1284
AjnI	CCWGG	1 cut(s)	1029
Alw21I	GWGCWC	1 cut(s)	312
Alw26I	GTCTC	4 cut(s)	76, 1347, 1633, 1673
AlwI	GGATC	4 cut(s)	690, 914, 1044, 1586
AlwNI	CAGNNNCTG	3 cut(s)	467, 619, 1595
Aor13HI	TCCGGA	1 cut(s)	164
AoxI	GGCC	3 cut(s)	159, 385, 1249
ApoI	RAATTY	4 cut(s)	649, 740, 1271, 1631
Asp700I	GAANNNNTTC	2 cut(s)	432, 1631
AspLEI	GCGC	2 cut(s)	239, 795
AspS9I	GGNCC	2 cut(s)	386, 585
AsuHPI	GGTGA	2 cut(s)	97, 1702
AsuII	TTCGAA	1 cut(s)	1336
AvaII	GGWCC	1 cut(s)	585
BaeI	ACNNNNGTAYC	2 cut(s)	1117, 1150
BanI	GGYRCC	1 cut(s)	792
BanII	GRGCYC	2 cut(s)	312, 613
BauI	CACGAG	2 cut(s)	579, 1229
BbsI	GAAGAC	4 cut(s)	1112, 1450, 1620, 1736
Bbv12I	GWGCWC	1 cut(s)	312
BccI	CCATC	4 cut(s)	670, 1692, 1712, 1750
BceAI	ACGGC	1 cut(s)	1187
BciT130I	CCWGG	1 cut(s)	1031
BciVI	GTATCC	1 cut(s)	231
BclI	TGATCA	3 cut(s)	1099, 1351, 1692
BcoDI	GTCTC	4 cut(s)	76, 1347, 1633, 1673
BfaI	CTAG	4 cut(s)	216, 957, 1530, 1661
BfmI	CTRYAG	3 cut(s)	258, 752, 1083
BfoI	RGCGCY	1 cut(s)	796
BfuAI	ACCTGC	1 cut(s)	1678
BfuI	GTATCC	1 cut(s)	231
BglII	AGATCT	1 cut(s)	1225
BlpI	GCTNAGC	1 cut(s)	612
Bme1390I	CCNGG	1 cut(s)	1031
Bme18I	GGWCC	1 cut(s)	585
BmgT120I	GGNCC	2 cut(s)	386, 585
BmiI	GGNNCC	3 cut(s)	586, 726, 794
BmrFI	CCNGG	1 cut(s)	1031
BmrI	ACTGGG	1 cut(s)	616
BmsI	GCATC	6 cut(s)	37, 580, 625, 668, 1040, 1267
BmuI	ACTGGG	1 cut(s)	616
BpiI	GAAGAC	4 cut(s)	1112, 1450, 1620, 1736
BpmI	CTGGAG	3 cut(s)	555, 1013, 1559
Bpu1102I	GCTNAGC	1 cut(s)	612
Bpu14I	TTCGAA	1 cut(s)	1336
BpuEI	CTTGAG	1 cut(s)	955
Bsa29I	ATCGAT	1 cut(s)	1487
BsaHI	GRCGYC	1 cut(s)	793
BsaJI	CCNNGG	3 cut(s)	195, 362, 654
BsaWI	WCCGGW	1 cut(s)	164
Bse1I	ACTGG	5 cut(s)	572, 611, 846, 1023, 1319
Bse3DI	GCAATG	3 cut(s)	189, 923, 1733
BseAI	TCCGGA	1 cut(s)	164
BseBI	CCWGG	1 cut(s)	1031
BseCI	ATCGAT	1 cut(s)	1487
BseDI	CCNNGG	3 cut(s)	195, 362, 654
BseGI	GGATG	8 cut(s)	14, 523, 1218, 1247, 1447, 1585, 1723, 1731
BseMI	GCAATG	3 cut(s)	189, 923, 1733
BseMII	CTCAG	4 cut(s)	325, 410, 626, 1073
BseNI	ACTGG	5 cut(s)	572, 611, 846, 1023, 1319
BseRI	GAGGAG	1 cut(s)	320
BseYI	CCCAGC	1 cut(s)	1208
BsgI	GTGCAG	3 cut(s)	654, 1253, 1284
Bsh1236I	CGCG	1 cut(s)	237
BshFI	GGCC	3 cut(s)	161, 387, 1251
BshNI	GGYRCC	1 cut(s)	792
BshVI	ATCGAT	1 cut(s)	1487
BsiHKAI	GWGCWC	1 cut(s)	312
BsiSI	CCGG	1 cut(s)	165
BslFI	GGGAC	1 cut(s)	598
BsmAI	GTCTC	4 cut(s)	76, 1347, 1633, 1673
BsmFI	GGGAC	1 cut(s)	598
BsnI	GGCC	3 cut(s)	161, 387, 1251
Bsp119I	TTCGAA	1 cut(s)	1336
Bsp1286I	GDGCHC	2 cut(s)	312, 613
Bsp13I	TCCGGA	1 cut(s)	164
Bsp1720I	GCTNAGC	1 cut(s)	612
Bsp19I	CCATGG	3 cut(s)	195, 362, 654
BspACI	CCGC	6 cut(s)	122, 235, 471, 497, 1053, 1120
BspANI	GGCC	3 cut(s)	161, 387, 1251
BspCNI	CTCAG	4 cut(s)	324, 409, 625, 1072
BspDI	ATCGAT	1 cut(s)	1487
BspEI	TCCGGA	1 cut(s)	164
BspFNI	CGCG	1 cut(s)	237
BspHI	TCATGA	1 cut(s)	1635
BspLI	GGNNCC	3 cut(s)	586, 726, 794
BspMAI	CTGCAG	2 cut(s)	756, 1087
BspMI	ACCTGC	1 cut(s)	1678
BspPI	GGATC	4 cut(s)	690, 914, 1044, 1586
BspQI	GCTCTTC	1 cut(s)	811
BspT104I	TTCGAA	1 cut(s)	1336
BspT107I	GGYRCC	1 cut(s)	792
BsrDI	GCAATG	3 cut(s)	189, 923, 1733
BsrI	ACTGG	5 cut(s)	572, 611, 846, 1023, 1319
BssECI	CCNNGG	3 cut(s)	195, 362, 654
BssNI	GRCGYC	1 cut(s)	793
BssSI	CACGAG	2 cut(s)	579, 1229
BssT1I	CCWWGG	3 cut(s)	195, 362, 654
Bst2BI	CACGAG	2 cut(s)	579, 1229
Bst2UI	CCWGG	1 cut(s)	1031
Bst4CI	ACNGT	1 cut(s)	773
Bst6I	CTCTTC	4 cut(s)	79, 441, 811, 1487
BstACI	GRCGYC	1 cut(s)	793
BstAPI	GCANNNNNTGC	2 cut(s)	467, 1849
BstBI	TTCGAA	1 cut(s)	1336
BstC8I	GCNNGC	3 cut(s)	729, 891, 1500
BstDEI	CTNAG	5 cut(s)	311, 396, 612, 638, 1059
BstDSI	CCRYGG	3 cut(s)	195, 362, 654
BstF5I	GGATG	8 cut(s)	14, 523, 1218, 1247, 1447, 1585, 1723, 1731
BstFNI	CGCG	1 cut(s)	237
BstH2I	RGCGCY	1 cut(s)	796
BstHHI	GCGC	2 cut(s)	239, 795
BstMAI	GTCTC	4 cut(s)	76, 1347, 1633, 1673
BstNI	CCWGG	1 cut(s)	1031
BstSCI	CCNGG	1 cut(s)	1029
BstSFI	CTRYAG	3 cut(s)	258, 752, 1083
BstUI	CGCG	1 cut(s)	237
BstV2I	GAAGAC	4 cut(s)	1112, 1450, 1620, 1736
BstX2I	RGATCY	3 cut(s)	1036, 1225, 1591
BstYI	RGATCY	3 cut(s)	1036, 1225, 1591
Bsu15I	ATCGAT	1 cut(s)	1487
BsuI	GTATCC	1 cut(s)	231
BsuRI	GGCC	3 cut(s)	161, 387, 1251
BsuTUI	ATCGAT	1 cut(s)	1487
BtgI	CCRYGG	3 cut(s)	195, 362, 654
BtgZI	GCGATG	1 cut(s)	60
BtsCI	GGATG	8 cut(s)	14, 523, 1218, 1247, 1447, 1585, 1723, 1731
BtsIMutI	CAGTG	4 cut(s)	423, 671, 853, 1312
BveI	ACCTGC	1 cut(s)	1678
Cac8I	GCNNGC	3 cut(s)	729, 891, 1500
CaiI	CAGNNNCTG	3 cut(s)	467, 619, 1595
CciI	TCATGA	1 cut(s)	1635
CfoI	GCGC	2 cut(s)	239, 795
Cfr13I	GGNCC	2 cut(s)	386, 585
ClaI	ATCGAT	1 cut(s)	1487
CseI	GACGC	1 cut(s)	1607
Csp6I	GTAC	2 cut(s)	40, 1658
CspCI	CAANNNNNGTGG	2 cut(s)	501, 536
CviAII	CATG	7 cut(s)	196, 363, 655, 1138, 1384, 1636, 1794
CviQI	GTAC	2 cut(s)	40, 1658
DdeI	CTNAG	5 cut(s)	311, 396, 612, 638, 1059
DinI	GGCGCC	1 cut(s)	794
DraIII	CACNNNGTG	1 cut(s)	1387
Eam1104I	CTCTTC	4 cut(s)	79, 441, 811, 1487
EarI	CTCTTC	4 cut(s)	79, 441, 811, 1487
Ecl136II	GAGCTC	1 cut(s)	310
Eco130I	CCWWGG	3 cut(s)	195, 362, 654
Eco147I	AGGCCT	1 cut(s)	161
Eco24I	GRGCYC	2 cut(s)	312, 613
Eco47I	GGWCC	1 cut(s)	585
Eco53kI	GAGCTC	1 cut(s)	310
Eco57I	CTGAAG	6 cut(s)	495, 524, 735, 996, 1632, 1832
EcoICRI	GAGCTC	1 cut(s)	310
EcoRII	CCWGG	1 cut(s)	1029
EcoT14I	CCWWGG	3 cut(s)	195, 362, 654
EcoT38I	GRGCYC	2 cut(s)	312, 613
EgeI	GGCGCC	1 cut(s)	794
EheI	GGCGCC	1 cut(s)	794
ErhI	CCWWGG	3 cut(s)	195, 362, 654
FaeI	CATG	7 cut(s)	199, 366, 658, 1141, 1387, 1639, 1797
FaqI	GGGAC	1 cut(s)	598
FatI	CATG	7 cut(s)	195, 362, 654, 1137, 1383, 1635, 1793
FauI	CCCGC	1 cut(s)	1113
FbaI	TGATCA	3 cut(s)	1099, 1351, 1692
FblI	GTMKAC	1 cut(s)	909
FokI	GGATG	7 cut(s)	530, 1225, 1254, 1434, 1592, 1730, 1738
FriOI	GRGCYC	2 cut(s)	312, 613
FspBI	CTAG	4 cut(s)	216, 957, 1530, 1661
GlaI	GCGC	2 cut(s)	238, 794
GsaI	CCCAGC	1 cut(s)	1212
GsuI	CTGGAG	3 cut(s)	555, 1013, 1559
HaeII	RGCGCY	1 cut(s)	796
HaeIII	GGCC	3 cut(s)	161, 387, 1251
HapII	CCGG	1 cut(s)	165
HgaI	GACGC	1 cut(s)	1607
HhaI	GCGC	2 cut(s)	239, 795
Hin1I	GRCGYC	1 cut(s)	793
Hin1II	CATG	7 cut(s)	199, 366, 658, 1141, 1387, 1639, 1797
Hin6I	GCGC	2 cut(s)	237, 793
HinP1I	GCGC	2 cut(s)	237, 793
HinfI	GANTC	7 cut(s)	341, 710, 1216, 1516, 1554, 1564, 1790
HpaII	CCGG	1 cut(s)	165
HphI	GGTGA	2 cut(s)	97, 1702
Hpy166II	GTNNAC	4 cut(s)	910, 1126, 1373, 1438
Hpy188III	TCNNGA	6 cut(s)	165, 620, 957, 1223, 1595, 1636
Hpy8I	GTNNAC	4 cut(s)	910, 1126, 1373, 1438
HpyAV	CCTTC	8 cut(s)	151, 330, 499, 802, 989, 1232, 1584, 1648
HpyCH4III	ACNGT	1 cut(s)	773
HpyCH4IV	ACGT	1 cut(s)	906
HpyF3I	CTNAG	5 cut(s)	311, 396, 612, 638, 1059
HpySE526I	ACGT	1 cut(s)	906
Hsp92I	GRCGYC	1 cut(s)	793
Hsp92II	CATG	7 cut(s)	199, 366, 658, 1141, 1387, 1639, 1797
HspAI	GCGC	2 cut(s)	237, 793
KasI	GGCGCC	1 cut(s)	792
Kpn2I	TCCGGA	1 cut(s)	164
Ksp22I	TGATCA	3 cut(s)	1099, 1351, 1692
LguI	GCTCTTC	1 cut(s)	811
LmnI	GCTCC	9 cut(s)	167, 307, 724, 757, 1032, 1205, 1531, 1540, 1750
LweI	GCATC	6 cut(s)	37, 580, 625, 668, 1040, 1267
MaeI	CTAG	4 cut(s)	216, 957, 1530, 1661
MaeII	ACGT	1 cut(s)	906
MaeIII	GTNAC	2 cut(s)	481, 929
MfeI	CAATTG	2 cut(s)	1185, 1424
MflI	RGATCY	3 cut(s)	1036, 1225, 1591
MhlI	GDGCHC	2 cut(s)	312, 613
Mly113I	GGCGCC	1 cut(s)	793
MlyI	GAGTC	3 cut(s)	719, 1510, 1799
MmeI	TCCRAC	1 cut(s)	792
MroI	TCCGGA	1 cut(s)	164
MroXI	GAANNNNTTC	2 cut(s)	432, 1631
MseI	TTAA	7 cut(s)	86, 333, 1112, 1158, 1293, 1323, 1569
MslI	CAYNNNNRTG	3 cut(s)	194, 1048, 1452
MspA1I	CMGCKG	3 cut(s)	464, 473, 1610
MspI	CCGG	1 cut(s)	165
MspR9I	CCNGG	1 cut(s)	1031
MunI	CAATTG	2 cut(s)	1185, 1424
MvaI	CCWGG	1 cut(s)	1031
MvnI	CGCG	1 cut(s)	237
NarI	GGCGCC	1 cut(s)	793
NcoI	CCATGG	3 cut(s)	195, 362, 654
NlaIII	CATG	7 cut(s)	199, 366, 658, 1141, 1387, 1639, 1797
NlaIV	GGNNCC	3 cut(s)	586, 726, 794
NspV	TTCGAA	1 cut(s)	1336
PagI	TCATGA	1 cut(s)	1635
PaqCI	CACCTGC	1 cut(s)	1678
PceI	AGGCCT	1 cut(s)	161
PciSI	GCTCTTC	1 cut(s)	811
PdmI	GAANNNNTTC	2 cut(s)	432, 1631
PfeI	GAWTC	4 cut(s)	341, 1216, 1554, 1564
PfoI	TCCNGGA	1 cut(s)	1029
PleI	GAGTC	3 cut(s)	718, 1510, 1798
PluTI	GGCGCC	1 cut(s)	796
PpsI	GAGTC	3 cut(s)	718, 1510, 1798
Psp124BI	GAGCTC	1 cut(s)	312
Psp6I	CCWGG	1 cut(s)	1029
PspFI	CCCAGC	1 cut(s)	1208
PspGI	CCWGG	1 cut(s)	1029
PspN4I	GGNNCC	3 cut(s)	586, 726, 794
PspPI	GGNCC	2 cut(s)	386, 585
PstI	CTGCAG	2 cut(s)	756, 1087
PstNI	CAGNNNCTG	3 cut(s)	467, 619, 1595
PsuI	RGATCY	3 cut(s)	1036, 1225, 1591
PvuII	CAGCTG	2 cut(s)	464, 1610
RsaI	GTAC	2 cut(s)	41, 1659
RsaNI	GTAC	2 cut(s)	40, 1658
RseI	CAYNNNNRTG	3 cut(s)	194, 1048, 1452
SacI	GAGCTC	1 cut(s)	312
SapI	GCTCTTC	1 cut(s)	811
SaqAI	TTAA	7 cut(s)	86, 333, 1112, 1158, 1293, 1323, 1569
Sau96I	GGNCC	2 cut(s)	386, 585
SchI	GAGTC	3 cut(s)	719, 1510, 1799
ScrFI	CCNGG	1 cut(s)	1031
SduI	GDGCHC	2 cut(s)	312, 613
SfaNI	GCATC	6 cut(s)	37, 580, 625, 668, 1040, 1267
SfcI	CTRYAG	3 cut(s)	258, 752, 1083
SfoI	GGCGCC	1 cut(s)	794
SfuI	TTCGAA	1 cut(s)	1336
SinI	GGWCC	1 cut(s)	585
SmiMI	CAYNNNNRTG	3 cut(s)	194, 1048, 1452
SmlI	CTYRAG	1 cut(s)	934
SmoI	CTYRAG	1 cut(s)	934
SseBI	AGGCCT	1 cut(s)	161
SsiI	CCGC	6 cut(s)	122, 235, 471, 497, 1053, 1120
SspDI	GGCGCC	1 cut(s)	792
SspMI	CTAG	4 cut(s)	216, 957, 1530, 1661
SstI	GAGCTC	1 cut(s)	312
StuI	AGGCCT	1 cut(s)	161
StyD4I	CCNGG	1 cut(s)	1029
StyI	CCWWGG	3 cut(s)	195, 362, 654
TaaI	ACNGT	1 cut(s)	773
TaiI	ACGT	1 cut(s)	909
TaqI	TCGA	4 cut(s)	358, 1336, 1358, 1487
TaqII	GACCGA	1 cut(s)	602
TauI	GCSGC	3 cut(s)	473, 500, 1056
TfiI	GAWTC	4 cut(s)	341, 1216, 1554, 1564
Tru1I	TTAA	7 cut(s)	86, 333, 1112, 1158, 1293, 1323, 1569
Tru9I	TTAA	7 cut(s)	86, 333, 1112, 1158, 1293, 1323, 1569
TscAI	CASTG	4 cut(s)	430, 678, 853, 1319
TspGWI	ACGGA	2 cut(s)	847, 1455
TspRI	CASTG	4 cut(s)	430, 678, 853, 1319
VpaK11BI	GGWCC	1 cut(s)	585
XapI	RAATTY	4 cut(s)	649, 740, 1271, 1631
XbaI	TCTAGA	1 cut(s)	956
XmiI	GTMKAC	1 cut(s)	909
XmnI	GAANNNNTTC	2 cut(s)	432, 1631
XspI	CTAG	4 cut(s)	216, 957, 1530, 1661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.