AT1G15380

lactoylglutathione lyase family protein glyoxalase I family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012767
Physical Location & Seq
Forward (+)
5290582 .. 5292582
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G15380.2

Sequence Viewer

Length: 525 bp
ATGAAGGAAGACGCAGGAAACCCTTTGCATCTCACGTCACTGAACCATGTCTCTGTCTTGTGCCGATCCGTCGACGAATCTATGAATTTTTACCAAAAGGTGTTAGGGTTCATCCCGATACGAAGACCTGAATCCTTAAATTTTGAAGGCGCTTGGTTGTTTGGTCACGGGATTGGAATACACCTCCTGTGTGCCCCAGAACCAGAGAAACTTCCCAAGAAAACTGCGATTAATCCCAAGGATAATCACATCTCTTTCCAGTGTGAGAGTATGGGAGTAGTGGAGAAGAAGCTGGAGGAAATGGGGATAGATTATGTAAGGGCATTAGTAGAAGAAGGAGGGATCCAAGTGGACCAGCTCTTCTTCCATGACCCTGATGGCTTCATGATCGAGATTTGCAACTGCGATAGCCTCCCCGTAGTCCCCCTCGTAGGAGAAATGGCTCGGTCCTGCTCAAGAGTCAAACTCCACCAGATGGTGCAGCCACAACCGCAGACTCAGATCCACCAAGTGGTCTACCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyoxalase

Protein Analysis

174

Amino Acids

19.59

Weight (kDa)

5.56

Isoelectric Point (pI)

45.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 14 - 132 1.2e-11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012767)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15380 AT1G15380 AT1G80160 AT1G80160
fragaria_vesca FvH4_6g30160
malus_domestica MD17G1207700.v1.1
prunus_persica Prupe.3G082100_v2.0.a1
pyrus_communis pycom17g21020
rosa_chinensis RchiOBHm_Chr3g0458691
rosa_laevigata RLG00000019525
rosa_multiflora Rmu_sc0001998.1_g000022
rosa_roxburghii Rroxscaffold_2G00108340
rosa_rugosa Rorug02G0329400
rosa_samantha Rh2AG380900 Rh2BG374500 Rh2BG387700 Rh2DG404000
rosa_wichuraiana Rw2G031150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 475, 511
AccI GTMKAC 2 cut(s) 72, 516
AciI CCGC 1 cut(s) 491
AclWI GGATC 4 cut(s) 60, 337, 350, 496
AcsI RAATTY 2 cut(s) 85, 139
AdeI CACNNNGTG 1 cut(s) 511
AfiI CCNNNNNNNGG 3 cut(s) 431, 475, 511
AgsI TTSAA 1 cut(s) 146
AjiI CACGTC 1 cut(s) 36
AluBI AGCT 2 cut(s) 292, 358
AluI AGCT 2 cut(s) 292, 358
Alw26I GTCTC 1 cut(s) 55
AlwI GGATC 4 cut(s) 60, 337, 350, 496
ApeKI GCWGC 1 cut(s) 481
ApoI RAATTY 2 cut(s) 85, 139
AseI ATTAAT 1 cut(s) 231
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 2 cut(s) 352, 447
AvaII GGWCC 2 cut(s) 352, 447
BaeGI GKGCMC 1 cut(s) 196
BamHI GGATCC 1 cut(s) 342
BbsI GAAGAC 2 cut(s) 15, 130
BbvI GCAGC 1 cut(s) 493
BccI CCATC 2 cut(s) 371, 469
BcoDI GTCTC 1 cut(s) 55
BfoI RGCGCY 1 cut(s) 153
BisI GCNGC 1 cut(s) 482
BlsI GCNGC 1 cut(s) 483
Bme18I GGWCC 2 cut(s) 352, 447
BmgBI CACGTC 1 cut(s) 36
BmgT120I GGNCC 2 cut(s) 352, 447
BmiI GGNNCC 1 cut(s) 344
BmsI GCATC 1 cut(s) 37
BpiI GAAGAC 2 cut(s) 15, 130
BplI GAGNNNNNCTC 2 cut(s) 450, 482
BpmI CTGGAG 1 cut(s) 314
BpuEI CTTGAG 1 cut(s) 439
BsaJI CCNNGG 1 cut(s) 237
Bsc4I CCNNNNNNNGG 3 cut(s) 431, 475, 511
Bse1I ACTGG 1 cut(s) 259
BseDI CCNNGG 1 cut(s) 237
BseGI GGATG 1 cut(s) 111
BseLI CCNNNNNNNGG 3 cut(s) 431, 475, 511
BseMII CTCAG 1 cut(s) 512
BseNI ACTGG 1 cut(s) 259
BseSI GKGCMC 1 cut(s) 196
BseXI GCAGC 1 cut(s) 493
BsgI GTGCAG 1 cut(s) 500
BslFI GGGAC 1 cut(s) 407
BslI CCNNNNNNNGG 3 cut(s) 431, 475, 511
BsmAI GTCTC 1 cut(s) 55
BsmFI GGGAC 1 cut(s) 407
Bsp1286I GDGCHC 1 cut(s) 196
Bsp143I GATC 4 cut(s) 65, 342, 387, 501
BspACI CCGC 1 cut(s) 491
BspCNI CTCAG 1 cut(s) 511
BspHI TCATGA 1 cut(s) 384
BspLI GGNNCC 1 cut(s) 344
BspPI GGATC 4 cut(s) 60, 337, 350, 496
BspQI GCTCTTC 1 cut(s) 365
BsrI ACTGG 1 cut(s) 259
BssECI CCNNGG 1 cut(s) 237
BssMI GATC 4 cut(s) 65, 342, 387, 501
BssT1I CCWWGG 1 cut(s) 237
Bst6I CTCTTC 1 cut(s) 365
BstDEI CTNAG 1 cut(s) 498
BstF5I GGATG 1 cut(s) 111
BstH2I RGCGCY 1 cut(s) 153
BstHHI GCGC 1 cut(s) 152
BstKTI GATC 4 cut(s) 68, 345, 390, 504
BstMAI GTCTC 1 cut(s) 55
BstMBI GATC 4 cut(s) 65, 342, 387, 501
BstMWI GCNNNNNNNGC 1 cut(s) 490
BstSLI GKGCMC 1 cut(s) 196
BstV1I GCAGC 1 cut(s) 493
BstV2I GAAGAC 2 cut(s) 15, 130
BstX2I RGATCY 2 cut(s) 342, 501
BstYI RGATCY 2 cut(s) 342, 501
BtrI CACGTC 1 cut(s) 36
BtsCI GGATG 1 cut(s) 111
BtsIMutI CAGTG 2 cut(s) 38, 266
CciI TCATGA 1 cut(s) 384
CfoI GCGC 1 cut(s) 152
Cfr13I GGNCC 2 cut(s) 352, 447
CseI GACGC 1 cut(s) 20
CviAII CATG 3 cut(s) 47, 368, 385
CviJI RGCY 6 cut(s) 292, 358, 381, 411, 443, 484
CviKI_1 RGCY 6 cut(s) 292, 358, 381, 411, 443, 484
DdeI CTNAG 1 cut(s) 498
DpnI GATC 4 cut(s) 67, 344, 389, 503
DpnII GATC 4 cut(s) 65, 342, 387, 501
DraIII CACNNNGTG 1 cut(s) 511
Eam1104I CTCTTC 1 cut(s) 365
EarI CTCTTC 1 cut(s) 365
Eco130I CCWWGG 1 cut(s) 237
Eco47I GGWCC 2 cut(s) 352, 447
EcoT14I CCWWGG 1 cut(s) 237
ErhI CCWWGG 1 cut(s) 237
FaeI CATG 3 cut(s) 50, 371, 388
FaiI YATR 6 cut(s) 48, 83, 272, 315, 369, 386
FaqI GGGAC 1 cut(s) 407
FatI CATG 3 cut(s) 46, 367, 384
FblI GTMKAC 2 cut(s) 72, 516
Fnu4HI GCNGC 1 cut(s) 482
FokI GGATG 1 cut(s) 98
Fsp4HI GCNGC 1 cut(s) 482
GlaI GCGC 1 cut(s) 151
GluI GCNGC 1 cut(s) 482
GsuI CTGGAG 1 cut(s) 314
HaeII RGCGCY 1 cut(s) 153
HgaI GACGC 1 cut(s) 20
HhaI GCGC 1 cut(s) 152
Hin1II CATG 3 cut(s) 50, 371, 388
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HinfI GANTC 4 cut(s) 77, 131, 459, 496
Hpy166II GTNNAC 3 cut(s) 73, 352, 517
Hpy188I TCNGA 1 cut(s) 501
Hpy188III TCNNGA 4 cut(s) 115, 385, 391, 456
Hpy8I GTNNAC 3 cut(s) 73, 352, 517
Hpy99I CGWCG 2 cut(s) 74, 77
HpyAV CCTTC 2 cut(s) 140, 329
HpyCH4IV ACGT 1 cut(s) 35
HpyCH4V TGCA 3 cut(s) 28, 399, 481
HpyF10VI GCNNNNNNNGC 1 cut(s) 490
HpyF3I CTNAG 1 cut(s) 498
HpySE526I ACGT 1 cut(s) 35
Hsp92II CATG 3 cut(s) 50, 371, 388
HspAI GCGC 1 cut(s) 150
Kzo9I GATC 4 cut(s) 65, 342, 387, 501
LguI GCTCTTC 1 cut(s) 365
Lsp1109I GCAGC 1 cut(s) 493
LweI GCATC 1 cut(s) 37
MaeII ACGT 1 cut(s) 35
MaeIII GTNAC 2 cut(s) 36, 164
MalI GATC 4 cut(s) 67, 344, 389, 503
MboI GATC 4 cut(s) 65, 342, 387, 501
MboII GAAGA 6 cut(s) 20, 135, 298, 344, 352, 355
MflI RGATCY 2 cut(s) 342, 501
MhlI GDGCHC 1 cut(s) 196
MluCI AATT 2 cut(s) 85, 139
MlyI GAGTC 2 cut(s) 468, 490
MnlI CCTC 5 cut(s) 194, 289, 332, 422, 437
MseI TTAA 3 cut(s) 137, 231, 523
MwoI GCNNNNNNNGC 1 cut(s) 490
NdeII GATC 4 cut(s) 65, 342, 387, 501
NlaIII CATG 3 cut(s) 50, 371, 388
NlaIV GGNNCC 1 cut(s) 344
NmuCI GTSAC 2 cut(s) 36, 164
PagI TCATGA 1 cut(s) 384
PciSI GCTCTTC 1 cut(s) 365
PfeI GAWTC 2 cut(s) 77, 131
PflMI CCANNNNNTGG 2 cut(s) 475, 511
PkrI GCNGC 1 cut(s) 483
PleI GAGTC 2 cut(s) 467, 490
PpsI GAGTC 2 cut(s) 467, 490
PshBI ATTAAT 1 cut(s) 231
PspN4I GGNNCC 1 cut(s) 344
PspPI GGNCC 2 cut(s) 352, 447
PsuI RGATCY 2 cut(s) 342, 501
SalI GTCGAC 1 cut(s) 71
SapI GCTCTTC 1 cut(s) 365
SaqAI TTAA 3 cut(s) 137, 231, 523
SatI GCNGC 1 cut(s) 482
Sau3AI GATC 4 cut(s) 65, 342, 387, 501
Sau96I GGNCC 2 cut(s) 352, 447
SchI GAGTC 2 cut(s) 468, 490
SduI GDGCHC 1 cut(s) 196
SetI ASST 6 cut(s) 38, 102, 130, 186, 294, 360
SfaNI GCATC 1 cut(s) 37
SgrDI CGTCGACG 1 cut(s) 71
SinI GGWCC 2 cut(s) 352, 447
SmlI CTYRAG 1 cut(s) 454
SmoI CTYRAG 1 cut(s) 454
Sse9I AATT 2 cut(s) 85, 139
SsiI CCGC 1 cut(s) 491
StyI CCWWGG 1 cut(s) 237
TaiI ACGT 1 cut(s) 38
TaqI TCGA 2 cut(s) 72, 390
TaqII GACCGA 1 cut(s) 435
TasI AATT 2 cut(s) 85, 139
TfiI GAWTC 2 cut(s) 77, 131
Tru1I TTAA 3 cut(s) 137, 231, 523
Tru9I TTAA 3 cut(s) 137, 231, 523
TscAI CASTG 2 cut(s) 45, 266
TseFI GTSAC 2 cut(s) 36, 164
TseI GCWGC 1 cut(s) 481
Tsp45I GTSAC 2 cut(s) 36, 164
TspDTI ATGAA 4 cut(s) 17, 98, 100, 373
TspGWI ACGGA 1 cut(s) 58
TspRI CASTG 2 cut(s) 45, 266
Van91I CCANNNNNTGG 2 cut(s) 475, 511
VpaK11BI GGWCC 2 cut(s) 352, 447
VspI ATTAAT 1 cut(s) 231
XapI RAATTY 2 cut(s) 85, 139
XcmI CCANNNNNNNNNTGG 1 cut(s) 374
XmiI GTMKAC 2 cut(s) 72, 516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.