AT1G16010

magnesium transporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
5495373 .. 5497723
2351 bp
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UTR
Exon/CDS
Intron
AT1G16010.1

Sequence Viewer

Length: 1329 bp
ATGTCTGAGCTAAAAGAGCGCCTGCTTCCTCCAAGACCTGCTTCAGCTATGAACCTCAGAGATGCTTCTGTGACTCGGCCTTCTGCTTCTGGAAGACCACCCCTTCTTGGAGTTGATGTCTTGGGTCTGAAGAAGCGTGGACAAGGCCTACGCTCTTGGATTCGTGTTGATACTTCTGGTAATACTCAGGTCATGGAGGTTGACAAGTTCACTATGATGCGTAGGTGTGACTTACCCGCCCGTGATTTAAGGCTGCTTGATCCCTTATTCGTGTATCCCTCTACTATCCTAGGCCGAGAGAAGGCTATTGTTGTCAACTTAGAGCAGATCCGTTGTATTATTACTGCAGACGAAGTTCTGCTTCTGAATTCCCTTGACAACTACGTGCTGCGCTATGTTGTTGAGTTGCAGCAGAGACTAAAGACTAGTAGTGTAGGTGAGATGTGGCAGCAGGAAAATTCCCAGTTGAGTAGGAGGAGGAGCAGGAGTTTTGACAATGCTTTTGAGAATTCATCCCCTGATTATTTACCTTTCGAGTTTAGAGCTCTTGAAATAGCCCTTGAAGCTGCTTGTACGTTTCTCGATTCCCAGGCTTCAGAGTTGGAGATTGAGGCATACCCGTTATTAGATGAGCTTACCTCAAAGATCAGTACACTAAACTTGGAGCGTGTGCGTAGACTAAAGAGCAGGCTTGTAGCACTGACAAGAAGAGTTCAGAAGGTTCGGGATGAGATCGAGCAGCTAATGGATGATGATGGAGATATGGCAGAAATGTATCTAACAGAGAAGAAGAGGAGAATGGAAGGATCTATGTACGGTGACCAGTCCTTATTGGGTTACAGGTCAAATGATGGTCTATCTGTTTCTGCACCGGTGTCTCCTGTTTCTTCTCCACCTGATTCCCGAAGACTTGATAAAAGCTTGAGCATTGCGAGGAGTCGGCATGACAGTGCAAGGAGTTCTGAAGGTGCAGAGAATATAGAAGAGCTAGAGATGTTGCTGGAAGCTTACTTTGTCGTCATTGATAGTACTCTAAACAAGTTGACATCGTTAAAGGAGTACATTGATGACACTGAAGATTTCATTAACATTCAACTGGATAATGTGCGGAATCAGCTGATCCAGTTCGAGTTGCTTCTGACGACTGCAACGTTTGTTGTAGCCATATTTGGGGTCGTTGCTGGGATCTTTGGGATGAACTTTGAGATAGACTTCTTCAATCAGCCAGGTGCATTCAGATGGGTACTCATAATTACTGGAGTATGTGGCTTTGTGATATTTTCGGCATTCGTCTGGTTCTTCAAGTACAGAAGACTCATGCCTCTATAA

Protein Analysis

442

Amino Acids

50.42

Weight (kDa)

5.26

Isoelectric Point (pI)

60.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 57 - 266 1.2e-26 Magnesium transporter MRS2-like
MRS2-like PF22099 322 - 370 3.6e-07 Magnesium transporter MRS2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 46
AccI GTMKAC 1 cut(s) 676
AciI CCGC 2 cut(s) 237, 1108
AclI AACGTT 1 cut(s) 1151
AclWI GGATC 5 cut(s) 254, 322, 814, 1114, 1193
AcsI RAATTY 3 cut(s) 367, 457, 508
AcuI CTGAAG 5 cut(s) 27, 149, 579, 984, 1095
AfaI GTAC 7 cut(s) 574, 652, 815, 1030, 1061, 1245, 1307
AfiI CCNNNNNNNGG 3 cut(s) 107, 301, 1170
AgeI ACCGGT 1 cut(s) 871
AgsI TTSAA 5 cut(s) 551, 563, 1094, 1219, 1303
AhlI ACTAGT 1 cut(s) 425
AjnI CCWGG 2 cut(s) 588, 1225
AjuI GAANNNNNNNTTGG 2 cut(s) 25, 57
Alw21I GWGCWC 1 cut(s) 547
Alw26I GTCTC 2 cut(s) 409, 882
AlwI GGATC 5 cut(s) 254, 322, 814, 1114, 1193
AoxI GGCC 3 cut(s) 77, 145, 292
ApeKI GCWGC 6 cut(s) 253, 388, 409, 448, 566, 739
ApoI RAATTY 3 cut(s) 367, 457, 508
ArsI GACNNNNNNTTYG 2 cut(s) 485, 517
AsiGI ACCGGT 1 cut(s) 871
AspA2I CCTAGG 1 cut(s) 289
AspLEI GCGC 2 cut(s) 21, 393
AsuHPI GGTGA 2 cut(s) 449, 830
AvrII CCTAGG 1 cut(s) 289
BanII GRGCYC 1 cut(s) 547
BbsI GAAGAC 3 cut(s) 100, 913, 1318
Bbv12I GWGCWC 1 cut(s) 547
BbvI GCAGC 6 cut(s) 240, 375, 421, 460, 553, 751
BccI CCATC 3 cut(s) 749, 845, 1233
BciT130I CCWGG 2 cut(s) 590, 1227
BciVI GTATCC 1 cut(s) 285
BcoDI GTCTC 2 cut(s) 409, 882
BcuI ACTAGT 1 cut(s) 425
BfaI CTAG 3 cut(s) 290, 426, 989
BfmI CTRYAG 1 cut(s) 345
BfoI RGCGCY 1 cut(s) 22
BfuAI ACCTGC 1 cut(s) 46
BfuI GTATCC 1 cut(s) 285
BisI GCNGC 6 cut(s) 254, 389, 410, 449, 567, 740
BlnI CCTAGG 1 cut(s) 289
BlsI GCNGC 6 cut(s) 255, 390, 411, 450, 568, 741
BmcAI AGTACT 1 cut(s) 1030
Bme1390I CCNGG 2 cut(s) 590, 1227
BmrFI CCNGG 2 cut(s) 590, 1227
BmrI ACTGGG 1 cut(s) 457
BmsI GCATC 2 cut(s) 52, 207
BmuI ACTGGG 1 cut(s) 457
BpiI GAAGAC 3 cut(s) 100, 913, 1318
BplI GAGNNNNNCTC 2 cut(s) 623, 655
BpmI CTGGAG 1 cut(s) 1278
BpuEI CTTGAG 1 cut(s) 943
BsaAI YACGTR 1 cut(s) 385
BsaJI CCNNGG 2 cut(s) 289, 588
BsaWI WCCGGW 1 cut(s) 871
BsaXI ACNNNNNCTCC 4 cut(s) 102, 132, 472, 502
Bsc4I CCNNNNNNNGG 3 cut(s) 107, 301, 1170
Bse118I RCCGGY 1 cut(s) 871
Bse1I ACTGG 5 cut(s) 463, 823, 1101, 1123, 1261
Bse3DI GCAATG 1 cut(s) 927
BseBI CCWGG 2 cut(s) 590, 1227
BseDI CCNNGG 2 cut(s) 289, 588
BseGI GGATG 4 cut(s) 512, 733, 754, 1200
BseLI CCNNNNNNNGG 3 cut(s) 107, 301, 1170
BseMI GCAATG 1 cut(s) 927
BseMII CTCAG 2 cut(s) 70, 200
BseNI ACTGG 5 cut(s) 463, 823, 1101, 1123, 1261
BseRI GAGGAG 4 cut(s) 490, 493, 808, 949
BseXI GCAGC 6 cut(s) 240, 375, 421, 460, 553, 751
BseYI CCCAGC 1 cut(s) 1181
BsgI GTGCAG 2 cut(s) 852, 990
BshFI GGCC 3 cut(s) 79, 147, 294
BshTI ACCGGT 1 cut(s) 871
BsiHKAI GWGCWC 1 cut(s) 547
BsiSI CCGG 1 cut(s) 872
BslI CCNNNNNNNGG 3 cut(s) 107, 301, 1170
BsmAI GTCTC 2 cut(s) 409, 882
BsmI GAATGC 2 cut(s) 1232, 1286
BsnI GGCC 3 cut(s) 79, 147, 294
Bsp1286I GDGCHC 1 cut(s) 547
Bsp143I GATC 7 cut(s) 259, 327, 645, 732, 806, 1119, 1185
BspACI CCGC 2 cut(s) 237, 1108
BspANI GGCC 3 cut(s) 79, 147, 294
BspCNI CTCAG 2 cut(s) 69, 199
BspMAI CTGCAG 1 cut(s) 349
BspMI ACCTGC 1 cut(s) 46
BspPI GGATC 5 cut(s) 254, 322, 814, 1114, 1193
BspQI GCTCTTC 1 cut(s) 978
BsrDI GCAATG 1 cut(s) 927
BsrFI RCCGGY 1 cut(s) 871
BsrI ACTGG 5 cut(s) 463, 823, 1101, 1123, 1261
BssAI RCCGGY 1 cut(s) 871
BssECI CCNNGG 2 cut(s) 289, 588
BssMI GATC 7 cut(s) 259, 327, 645, 732, 806, 1119, 1185
BssT1I CCWWGG 1 cut(s) 289
Bst2UI CCWGG 2 cut(s) 590, 1227
Bst4CI ACNGT 2 cut(s) 818, 950
Bst6I CTCTTC 3 cut(s) 703, 785, 978
BstBAI YACGTR 1 cut(s) 385
BstC8I GCNNGC 2 cut(s) 23, 689
BstDEI CTNAG 4 cut(s) 6, 56, 186, 319
BstEII GGTNACC 1 cut(s) 818
BstF5I GGATG 4 cut(s) 512, 733, 754, 1200
BstH2I RGCGCY 1 cut(s) 22
BstHHI GCGC 2 cut(s) 21, 393
BstKTI GATC 7 cut(s) 262, 330, 648, 735, 809, 1122, 1188
BstMAI GTCTC 2 cut(s) 409, 882
BstMBI GATC 7 cut(s) 259, 327, 645, 732, 806, 1119, 1185
BstMWI GCNNNNNNNGC 3 cut(s) 16, 563, 1114
BstNI CCWGG 2 cut(s) 590, 1227
BstPI GGTNACC 1 cut(s) 818
BstSCI CCNGG 2 cut(s) 588, 1225
BstSFI CTRYAG 1 cut(s) 345
BstV1I GCAGC 6 cut(s) 240, 375, 421, 460, 553, 751
BstV2I GAAGAC 3 cut(s) 100, 913, 1318
BstX2I RGATCY 3 cut(s) 327, 806, 1185
BstYI RGATCY 3 cut(s) 327, 806, 1185
BsuI GTATCC 1 cut(s) 285
BsuRI GGCC 3 cut(s) 79, 147, 294
BtsCI GGATG 4 cut(s) 512, 733, 754, 1200
BtsIMutI CAGTG 3 cut(s) 698, 955, 1071
BveI ACCTGC 1 cut(s) 46
Cac8I GCNNGC 2 cut(s) 23, 689
CfoI GCGC 2 cut(s) 21, 393
Cfr10I RCCGGY 1 cut(s) 871
Csp6I GTAC 7 cut(s) 573, 651, 814, 1029, 1060, 1244, 1306
CspAI ACCGGT 1 cut(s) 871
CviAII CATG 3 cut(s) 193, 944, 1318
CviQI GTAC 7 cut(s) 573, 651, 814, 1029, 1060, 1244, 1306
DdeI CTNAG 4 cut(s) 6, 56, 186, 319
DpnI GATC 7 cut(s) 261, 329, 647, 734, 808, 1121, 1187
DpnII GATC 7 cut(s) 259, 327, 645, 732, 806, 1119, 1185
Eam1104I CTCTTC 3 cut(s) 703, 785, 978
EarI CTCTTC 3 cut(s) 703, 785, 978
Ecl136II GAGCTC 1 cut(s) 545
Eco130I CCWWGG 1 cut(s) 289
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 547
Eco53kI GAGCTC 1 cut(s) 545
Eco57I CTGAAG 5 cut(s) 27, 149, 579, 984, 1095
Eco91I GGTNACC 1 cut(s) 818
EcoICRI GAGCTC 1 cut(s) 545
EcoO65I GGTNACC 1 cut(s) 818
EcoRI GAATTC 2 cut(s) 367, 508
EcoRII CCWGG 2 cut(s) 588, 1225
EcoT14I CCWWGG 1 cut(s) 289
EcoT38I GRGCYC 1 cut(s) 547
ErhI CCWWGG 1 cut(s) 289
FaeI CATG 3 cut(s) 196, 947, 1321
FalI AAGNNNNNCTT 4 cut(s) 25, 57, 345, 377
FatI CATG 3 cut(s) 192, 943, 1317
FauI CCCGC 1 cut(s) 244
FblI GTMKAC 1 cut(s) 676
Fnu4HI GCNGC 6 cut(s) 254, 389, 410, 449, 567, 740
FokI GGATG 4 cut(s) 499, 740, 761, 1207
FriOI GRGCYC 1 cut(s) 547
Fsp4HI GCNGC 6 cut(s) 254, 389, 410, 449, 567, 740
FspBI CTAG 3 cut(s) 290, 426, 989
GlaI GCGC 2 cut(s) 20, 392
GluI GCNGC 6 cut(s) 254, 389, 410, 449, 567, 740
GsaI CCCAGC 1 cut(s) 1185
GsuI CTGGAG 1 cut(s) 1278
HaeII RGCGCY 1 cut(s) 22
HaeIII GGCC 3 cut(s) 79, 147, 294
HapII CCGG 1 cut(s) 872
HhaI GCGC 2 cut(s) 21, 393
Hin1II CATG 3 cut(s) 196, 947, 1321
Hin6I GCGC 2 cut(s) 19, 391
HinP1I GCGC 2 cut(s) 19, 391
HincII GTYRAC 3 cut(s) 202, 316, 1044
HindII GTYRAC 3 cut(s) 202, 316, 1044
HindIII AAGCTT 2 cut(s) 919, 1005
HinfI GANTC 7 cut(s) 73, 160, 584, 899, 937, 1111, 1314
HpaII CCGG 1 cut(s) 872
HphI GGTGA 2 cut(s) 449, 830
Hpy166II GTNNAC 7 cut(s) 140, 202, 210, 316, 653, 677, 1044
Hpy188I TCNGA 9 cut(s) 7, 59, 129, 366, 598, 717, 964, 1140, 1238
Hpy188III TCNNGA 5 cut(s) 90, 548, 581, 725, 903
Hpy8I GTNNAC 7 cut(s) 140, 202, 210, 316, 653, 677, 1044
HpyAV CCTTC 6 cut(s) 90, 113, 295, 712, 797, 959
HpyCH4III ACNGT 2 cut(s) 818, 950
HpyCH4IV ACGT 3 cut(s) 384, 575, 1151
HpyCH4V TGCA 7 cut(s) 347, 409, 869, 953, 971, 1148, 1232
HpyF10VI GCNNNNNNNGC 3 cut(s) 16, 563, 1114
HpyF3I CTNAG 4 cut(s) 6, 56, 186, 319
HpySE526I ACGT 3 cut(s) 384, 575, 1151
Hsp92II CATG 3 cut(s) 196, 947, 1321
HspAI GCGC 2 cut(s) 19, 391
Kzo9I GATC 7 cut(s) 259, 327, 645, 732, 806, 1119, 1185
LguI GCTCTTC 1 cut(s) 978
LmnI GCTCC 2 cut(s) 480, 664
Lsp1109I GCAGC 6 cut(s) 240, 375, 421, 460, 553, 751
LweI GCATC 2 cut(s) 52, 207
MaeI CTAG 3 cut(s) 290, 426, 989
MaeII ACGT 3 cut(s) 384, 575, 1151
MaeIII GTNAC 4 cut(s) 70, 227, 818, 836
MalI GATC 7 cut(s) 261, 329, 647, 734, 808, 1121, 1187
MboI GATC 7 cut(s) 259, 327, 645, 732, 806, 1119, 1185
MflI RGATCY 3 cut(s) 327, 806, 1185
MhlI GDGCHC 1 cut(s) 547
MluCI AATT 4 cut(s) 367, 457, 508, 1251
MlyI GAGTC 3 cut(s) 67, 946, 1308
MmeI TCCRAC 1 cut(s) 582
MseI TTAA 3 cut(s) 248, 1052, 1086
MslI CAYNNNNRTG 3 cut(s) 215, 948, 1237
MspA1I CMGCKG 1 cut(s) 1117
MspI CCGG 1 cut(s) 872
MspR9I CCNGG 2 cut(s) 590, 1227
Mva1269I GAATGC 2 cut(s) 1232, 1286
MvaI CCWGG 2 cut(s) 590, 1227
MwoI GCNNNNNNNGC 3 cut(s) 16, 563, 1114
NdeII GATC 7 cut(s) 259, 327, 645, 732, 806, 1119, 1185
NlaIII CATG 3 cut(s) 196, 947, 1321
NmeAIII GCCGAG 2 cut(s) 55, 320
NmuCI GTSAC 3 cut(s) 70, 227, 818
PceI AGGCCT 1 cut(s) 147
PciSI GCTCTTC 1 cut(s) 978
PcsI WCGNNNNNNNCGW 1 cut(s) 1148
PctI GAATGC 2 cut(s) 1232, 1286
PfeI GAWTC 4 cut(s) 160, 584, 899, 1111
PinAI ACCGGT 1 cut(s) 871
PkrI GCNGC 6 cut(s) 255, 390, 411, 450, 568, 741
PleI GAGTC 3 cut(s) 67, 945, 1308
PpsI GAGTC 3 cut(s) 67, 945, 1308
Ppu21I YACGTR 1 cut(s) 385
Psp124BI GAGCTC 1 cut(s) 547
Psp1406I AACGTT 1 cut(s) 1151
Psp6I CCWGG 2 cut(s) 588, 1225
PspEI GGTNACC 1 cut(s) 818
PspFI CCCAGC 1 cut(s) 1181
PspGI CCWGG 2 cut(s) 588, 1225
PstI CTGCAG 1 cut(s) 349
PsuI RGATCY 3 cut(s) 327, 806, 1185
PvuII CAGCTG 1 cut(s) 1117
RsaI GTAC 7 cut(s) 574, 652, 815, 1030, 1061, 1245, 1307
RsaNI GTAC 7 cut(s) 573, 651, 814, 1029, 1060, 1244, 1306
RseI CAYNNNNRTG 3 cut(s) 215, 948, 1237
SacI GAGCTC 1 cut(s) 547
SapI GCTCTTC 1 cut(s) 978
SaqAI TTAA 3 cut(s) 248, 1052, 1086
SatI GCNGC 6 cut(s) 254, 389, 410, 449, 567, 740
Sau3AI GATC 7 cut(s) 259, 327, 645, 732, 806, 1119, 1185
ScaI AGTACT 1 cut(s) 1030
SchI GAGTC 3 cut(s) 67, 946, 1308
ScrFI CCNGG 2 cut(s) 590, 1227
SduI GDGCHC 1 cut(s) 547
SfaNI GCATC 2 cut(s) 52, 207
SfcI CTRYAG 1 cut(s) 345
SgrAI CRCCGGYG 1 cut(s) 871
SmiMI CAYNNNNRTG 3 cut(s) 215, 948, 1237
SmlI CTYRAG 1 cut(s) 922
SmoI CTYRAG 1 cut(s) 922
SpeI ACTAGT 1 cut(s) 425
Sse9I AATT 4 cut(s) 367, 457, 508, 1251
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 2 cut(s) 237, 1108
SspMI CTAG 3 cut(s) 290, 426, 989
SstI GAGCTC 1 cut(s) 547
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 2 cut(s) 588, 1225
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 2 cut(s) 818, 950
TaiI ACGT 3 cut(s) 387, 578, 1154
TaqI TCGA 4 cut(s) 534, 582, 735, 1128
TasI AATT 4 cut(s) 367, 457, 508, 1251
TatI WGTACW 4 cut(s) 650, 1028, 1059, 1305
TfiI GAWTC 4 cut(s) 160, 584, 899, 1111
Tru1I TTAA 3 cut(s) 248, 1052, 1086
Tru9I TTAA 3 cut(s) 248, 1052, 1086
TscAI CASTG 3 cut(s) 705, 955, 1078
TseFI GTSAC 3 cut(s) 70, 227, 818
TseI GCWGC 6 cut(s) 253, 388, 409, 448, 566, 739
Tsp45I GTSAC 3 cut(s) 70, 227, 818
TspDTI ATGAA 4 cut(s) 65, 501, 1072, 1211
TspGWI ACGGA 1 cut(s) 320
TspRI CASTG 3 cut(s) 705, 955, 1078
XapI RAATTY 3 cut(s) 367, 457, 508
XmaJI CCTAGG 1 cut(s) 289
XmiI GTMKAC 1 cut(s) 676
XspI CTAG 3 cut(s) 290, 426, 989
ZrmI AGTACT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.